Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013433

Physical Location & Seq

Genomic Coordinates Forward (+)

26358783 .. 26362552

Gene Structure 3770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G247400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGAGAGGGAGCTCGTGGAACCGTCGAACGGTACAGAGGCTGCGGCAGGCGTTGATCTCGACCGTTGGATCCATGAAGATCAAGCTTCTGCTCTGCTGTTGTATCGGCTTCACGCTCATCGCGCTCGCCAGCCGAGCTTCGGACTTTATGGGATGGACCAATCACACTGCTGCTCTGGAGCGGTTCTCTGATTCACGGAAAGGATACTCTATTGTAATGAACACTTGGAAGAGATATGATCTTTTGAAGCAGTCAATTTCTCACTATTCTAGATGCCCTCGGCTTGATTCGATACATATTGTGTGGAGTGAGCCAAGTCCTCCTTCAGATTCTCTGAGAAAATTTCTATACCACATTGTACAATTGAATACTAGAGATGGGCGACAAGTTGAACTGAAATTTGATATCAATACCGAAGACAGCTTGAACAACAGATTTAAAGAAATTAAGGATCTGAGAACAGATGCCATTTTCTCAATTGACGATGATGTTATATTCCCTTGCCCTTCAGTAGAATTTGCTTTCGATGTTTGGCAAAGTGCATCAGATACAATGGTTGGATTCGTGCCTCGCATGCACTGGGTTGATCCGACCAAAGGTGATAAGAATCACTACATTTATGGCGGATGGTGGTCAGTTTGGTGGACAGGTACATACAGTATGGTACTGTCTAAGGCAGCCTTCTTCCACAAAAAGTACCTAAGTCTGTACACAAATGAAATGCCAGCATCAATCAGAGAATTTATAACCAAGAACAGGAACTGTGAAGACATTGCGATGTCTTTTCTCGTAGCAAATGCAACTGGTGCTCCTCCAATATGGGTGAAAGGCAAGATATTTGAGATTGGTTCAACTGGAATCAGTAGCTTAGGAGGTCACAGTGAAAAAAGAACCCACTGCATCGACAGATTTGTTGCCGAGTTTGGACGAATGCCATTGGAACCGACGGCTGTGAAGGCTGTTGACAGTCGCAACATCTGGTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006073 GO:0006629 GO:0006643 GO:0006665 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008219 GO:0009664 GO:0009719 GO:0009725 GO:0009737 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0010383 GO:0010393 GO:0010395 GO:0010400 GO:0010401 GO:0012505 GO:0016043 GO:0016740 GO:0016757 GO:0016758 GO:0017144 GO:0030243 GO:0031410 GO:0031982 GO:0031984 GO:0032502 GO:0033993 GO:0035251 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0046527 GO:0048856 GO:0050896 GO:0051273 GO:0052541 GO:0052546 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097305 GO:0097708 GO:0098791 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00534 ko01100 map00534 map01100

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

330

Amino Acids

37.87

Weight (kDa)

9.19

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55830
fragaria_vesca	FvH4_7g24130
malus_domestica	MD01G1148500.v1.1 MD07G1215500.v1.1
prunus_persica	Prupe.2G247400_v2.0.a1 Prupe.2G247400_v2.0.a1
pyrus_communis	pycom01g16710 pycom07g19780
rosa_chinensis	RchiOBHm_Chr1g0369551
rosa_laevigata	RLG00000027119
rosa_multiflora	Rmu_sc0001154.1_g000003
rosa_roxburghii	Rroxscaffold_4G00287530
rosa_rugosa	Rorug01G0351100
rosa_samantha	Rh1AG359400 Rh1BG323100 Rh1CG336400 Rh1DG353900
rosa_wichuraiana	Rw1G031670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	746
AccBSI	CCGCTC	1 cut(s)	181
AccII	CGCG	1 cut(s)	122
AciI	CCGC	3 cut(s)	43, 181, 624
AclWI	GGATC	4 cut(s)	63, 76, 459, 581
AcsI	RAATTY	4 cut(s)	341, 398, 515, 740
AcuI	CTGAAG	2 cut(s)	309, 492
AfaI	GTAC	6 cut(s)	33, 360, 652, 666, 698, 710
AfiI	CCNNNNNNNGG	4 cut(s)	28, 139, 596, 756
AgsI	TTSAA	5 cut(s)	247, 367, 392, 427, 852
AjuI	GAANNNNNNNTTGG	2 cut(s)	307, 339
AluBI	AGCT	5 cut(s)	12, 85, 137, 423, 867
AluI	AGCT	5 cut(s)	12, 85, 137, 423, 867
Alw21I	GWGCWC	2 cut(s)	14, 811
AlwI	GGATC	4 cut(s)	63, 76, 459, 581
AlwNI	CAGNNNCTG	2 cut(s)	40, 762
ApeKI	GCWGC	3 cut(s)	40, 170, 677
ApoI	RAATTY	4 cut(s)	341, 398, 515, 740
AspLEI	GCGC	1 cut(s)	124
AspS9I	GGNCC	1 cut(s)	156
AsuHPI	GGTGA	2 cut(s)	611, 835
AvaII	GGWCC	1 cut(s)	156
BaeI	ACNNNNGTAYC	2 cut(s)	540, 573
BamHI	GGATCC	1 cut(s)	68
BanII	GRGCYC	1 cut(s)	14
BauI	CACGAG	1 cut(s)	13
BbsI	GAAGAC	2 cut(s)	423, 774
Bbv12I	GWGCWC	2 cut(s)	14, 811
BbvI	GCAGC	3 cut(s)	27, 157, 689
BccI	CCATC	3 cut(s)	147, 371, 621
BceAI	ACGGC	1 cut(s)	963
BciVI	GTATCC	1 cut(s)	197
BfaI	CTAG	2 cut(s)	270, 372
BfuI	GTATCC	1 cut(s)	197
BisI	GCNGC	4 cut(s)	41, 44, 171, 678
BlsI	GCNGC	4 cut(s)	42, 45, 172, 679
Bme18I	GGWCC	1 cut(s)	156
BmgT120I	GGNCC	1 cut(s)	156
BmiI	GGNNCC	3 cut(s)	20, 70, 942
BmrI	ACTGGG	1 cut(s)	589
BmsI	GCATC	5 cut(s)	263, 454, 551, 737, 909
BmuI	ACTGGG	1 cut(s)	589
BpiI	GAAGAC	2 cut(s)	423, 774
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	197
Bpu10I	CCTNAGC	1 cut(s)	868
BsaBI	GATNNNNATC	1 cut(s)	606
BsaJI	CCNNGG	1 cut(s)	278
BsaXI	ACNNNNNCTCC	2 cut(s)	793, 823
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 139, 596, 756
Bse1I	ACTGG	3 cut(s)	584, 808, 859
Bse3DI	GCAATG	1 cut(s)	771
Bse8I	GATNNNNATC	1 cut(s)	606
BseDI	CCNNGG	1 cut(s)	278
BseGI	GGATG	2 cut(s)	158, 632
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	4 cut(s)	28, 139, 596, 756
BseMI	GCAATG	1 cut(s)	771
BseMII	CTCAG	2 cut(s)	326, 446
BseNI	ACTGG	3 cut(s)	584, 808, 859
BseRI	GAGGAG	1 cut(s)	801
BseXI	GCAGC	3 cut(s)	27, 157, 689
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	1 cut(s)	63
BsiEI	CGRYCG	1 cut(s)	63
BsiHKAI	GWGCWC	2 cut(s)	14, 811
BslI	CCNNNNNNNGG	4 cut(s)	28, 139, 596, 756
BsmI	GAATGC	1 cut(s)	936
Bsp1286I	GDGCHC	2 cut(s)	14, 811
Bsp1407I	TGTACA	2 cut(s)	358, 708
Bsp143I	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
BspACI	CCGC	3 cut(s)	43, 181, 624
BspCNI	CTCAG	2 cut(s)	327, 447
BspFNI	CGCG	1 cut(s)	122
BspLI	GGNNCC	3 cut(s)	20, 70, 942
BspPI	GGATC	4 cut(s)	63, 76, 459, 581
BsrBI	CCGCTC	1 cut(s)	181
BsrDI	GCAATG	1 cut(s)	771
BsrGI	TGTACA	2 cut(s)	358, 708
BsrI	ACTGG	3 cut(s)	584, 808, 859
BssECI	CCNNGG	1 cut(s)	278
BssMI	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
BssSI	CACGAG	1 cut(s)	13
Bst2BI	CACGAG	1 cut(s)	13
Bst4CI	ACNGT	8 cut(s)	23, 31, 64, 659, 669, 764, 881, 968
Bst6I	CTCTTC	1 cut(s)	224
BstAPI	GCANNNNNTGC	1 cut(s)	806
BstAUI	TGTACA	2 cut(s)	358, 708
BstC8I	GCNNGC	5 cut(s)	48, 126, 130, 575, 726
BstDEI	CTNAG	5 cut(s)	335, 455, 672, 701, 868
BstF5I	GGATG	2 cut(s)	158, 632
BstFNI	CGCG	1 cut(s)	122
BstHHI	GCGC	1 cut(s)	124
BstKTI	GATC	6 cut(s)	57, 71, 81, 241, 454, 589
BstMBI	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
BstMCI	CGRYCG	1 cut(s)	63
BstMWI	GCNNNNNNNGC	5 cut(s)	121, 134, 574, 806, 956
BstNSI	RCATGY	1 cut(s)	577
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	27, 157, 689
BstV2I	GAAGAC	2 cut(s)	423, 774
BstX2I	RGATCY	2 cut(s)	68, 451
BstYI	RGATCY	2 cut(s)	68, 451
BsuI	GTATCC	1 cut(s)	197
BtgZI	GCGATG	2 cut(s)	103, 791
BtsCI	GGATG	2 cut(s)	158, 632
BtsI	GCAGTG	2 cut(s)	165, 895
BtsIMutI	CAGTG	4 cut(s)	165, 577, 886, 895
Cac8I	GCNNGC	5 cut(s)	48, 126, 130, 575, 726
CaiI	CAGNNNCTG	2 cut(s)	40, 762
CfoI	GCGC	1 cut(s)	124
Cfr13I	GGNCC	1 cut(s)	156
Csp6I	GTAC	6 cut(s)	32, 359, 651, 665, 697, 709
CviAII	CATG	2 cut(s)	73, 574
CviQI	GTAC	6 cut(s)	32, 359, 651, 665, 697, 709
DdeI	CTNAG	5 cut(s)	335, 455, 672, 701, 868
DpnI	GATC	6 cut(s)	56, 70, 80, 240, 453, 588
DpnII	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
DraI	TTTAAA	1 cut(s)	439
Eam1104I	CTCTTC	1 cut(s)	224
EarI	CTCTTC	1 cut(s)	224
EciI	GGCGGA	1 cut(s)	639
Ecl136II	GAGCTC	1 cut(s)	12
Eco24I	GRGCYC	1 cut(s)	14
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	1 cut(s)	156
Eco53kI	GAGCTC	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	309, 492
EcoICRI	GAGCTC	1 cut(s)	12
EcoRV	GATATC	1 cut(s)	406
EcoT38I	GRGCYC	1 cut(s)	14
FaeI	CATG	2 cut(s)	76, 577
FalI	AAGNNNNNCTT	4 cut(s)	307, 339, 665, 697
FatI	CATG	2 cut(s)	72, 573
Fnu4HI	GCNGC	4 cut(s)	41, 44, 171, 678
FokI	GGATG	2 cut(s)	165, 639
FriOI	GRGCYC	1 cut(s)	14
Fsp4HI	GCNGC	4 cut(s)	41, 44, 171, 678
FspBI	CTAG	2 cut(s)	270, 372
GlaI	GCGC	1 cut(s)	123
GluI	GCNGC	4 cut(s)	41, 44, 171, 678
GsuI	CTGGAG	1 cut(s)	197
HhaI	GCGC	1 cut(s)	124
Hin1II	CATG	2 cut(s)	76, 577
Hin6I	GCGC	1 cut(s)	122
HinP1I	GCGC	1 cut(s)	122
HincII	GTYRAC	1 cut(s)	964
HindII	GTYRAC	1 cut(s)	964
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	6 cut(s)	191, 287, 329, 561, 607, 858
HphI	GGTGA	2 cut(s)	611, 835
Hpy166II	GTNNAC	3 cut(s)	645, 711, 964
Hpy188I	TCNGA	8 cut(s)	142, 190, 328, 336, 456, 547, 591, 737
Hpy188III	TCNNGA	3 cut(s)	58, 176, 270
Hpy8I	GTNNAC	3 cut(s)	645, 711, 964
Hpy99I	CGWCG	2 cut(s)	27, 949
HpyAV	CCTTC	4 cut(s)	333, 516, 691, 949
HpyCH4III	ACNGT	8 cut(s)	23, 31, 64, 659, 669, 764, 881, 968
HpyCH4V	TGCA	4 cut(s)	542, 577, 800, 900
HpyF10VI	GCNNNNNNNGC	5 cut(s)	121, 134, 574, 806, 956
HpyF3I	CTNAG	5 cut(s)	335, 455, 672, 701, 868
Hsp92II	CATG	2 cut(s)	76, 577
HspAI	GCGC	1 cut(s)	122
Kzo9I	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
LmnI	GCTCC	3 cut(s)	9, 178, 814
Lsp1109I	GCAGC	3 cut(s)	27, 157, 689
LweI	GCATC	5 cut(s)	263, 454, 551, 737, 909
MaeI	CTAG	2 cut(s)	270, 372
MaeIII	GTNAC	1 cut(s)	875
MalI	GATC	6 cut(s)	56, 70, 80, 240, 453, 588
MbiI	CCGCTC	1 cut(s)	181
MboI	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
MboII	GAAGA	5 cut(s)	88, 241, 428, 676, 779
MfeI	CAATTG	2 cut(s)	362, 477
MflI	RGATCY	2 cut(s)	68, 451
MhlI	GDGCHC	2 cut(s)	14, 811
MluCI	AATT	8 cut(s)	255, 341, 362, 398, 444, 477, 515, 740
MmeI	TCCRAC	3 cut(s)	46, 538, 614
MnlI	CCTC	6 cut(s)	30, 288, 330, 579, 822, 866
MseI	TTAA	2 cut(s)	438, 447
MslI	CAYNNNNRTG	1 cut(s)	776
MunI	CAATTG	2 cut(s)	362, 477
Mva1269I	GAATGC	1 cut(s)	936
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	5 cut(s)	121, 134, 574, 806, 956
NdeII	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
NlaIII	CATG	2 cut(s)	76, 577
NlaIV	GGNNCC	3 cut(s)	20, 70, 942
NmeAIII	GCCGAG	3 cut(s)	158, 259, 943
NmuCI	GTSAC	1 cut(s)	875
NspI	RCATGY	1 cut(s)	577
PaeI	GCATGC	1 cut(s)	577
PctI	GAATGC	1 cut(s)	936
PfeI	GAWTC	6 cut(s)	191, 287, 329, 561, 607, 858
PkrI	GCNGC	4 cut(s)	42, 45, 172, 679
PsiI	TTATAA	1 cut(s)	746
Psp124BI	GAGCTC	1 cut(s)	14
PspN4I	GGNNCC	3 cut(s)	20, 70, 942
PspPI	GGNCC	1 cut(s)	156
PstNI	CAGNNNCTG	2 cut(s)	40, 762
PsuI	RGATCY	2 cut(s)	68, 451
RsaI	GTAC	6 cut(s)	33, 360, 652, 666, 698, 710
RsaNI	GTAC	6 cut(s)	32, 359, 651, 665, 697, 709
RseI	CAYNNNNRTG	1 cut(s)	776
SacI	GAGCTC	1 cut(s)	14
SaqAI	TTAA	2 cut(s)	438, 447
SatI	GCNGC	4 cut(s)	41, 44, 171, 678
Sau3AI	GATC	6 cut(s)	54, 68, 78, 238, 451, 586
Sau96I	GGNCC	1 cut(s)	156
SduI	GDGCHC	2 cut(s)	14, 811
SetI	ASST	9 cut(s)	14, 87, 139, 425, 601, 652, 702, 869, 877
SfaNI	GCATC	5 cut(s)	263, 454, 551, 737, 909
SinI	GGWCC	1 cut(s)	156
SmiMI	CAYNNNNRTG	1 cut(s)	776
SphI	GCATGC	1 cut(s)	577
Sse9I	AATT	8 cut(s)	255, 341, 362, 398, 444, 477, 515, 740
SsiI	CCGC	3 cut(s)	43, 181, 624
SspMI	CTAG	2 cut(s)	270, 372
SstI	GAGCTC	1 cut(s)	14
TaaI	ACNGT	8 cut(s)	23, 31, 64, 659, 669, 764, 881, 968
TaqI	TCGA	5 cut(s)	25, 59, 290, 525, 903
TasI	AATT	8 cut(s)	255, 341, 362, 398, 444, 477, 515, 740
TatI	WGTACW	2 cut(s)	358, 708
TauI	GCSGC	1 cut(s)	46
TfiI	GAWTC	6 cut(s)	191, 287, 329, 561, 607, 858
Tru1I	TTAA	2 cut(s)	438, 447
Tru9I	TTAA	2 cut(s)	438, 447
TscAI	CASTG	4 cut(s)	172, 584, 886, 902
TseFI	GTSAC	1 cut(s)	875
TseI	GCWGC	3 cut(s)	40, 170, 677
Tsp45I	GTSAC	1 cut(s)	875
TspDTI	ATGAA	3 cut(s)	89, 233, 732
TspGWI	ACGGA	1 cut(s)	211
TspRI	CASTG	4 cut(s)	172, 584, 886, 902
VpaK11BI	GGWCC	1 cut(s)	156
XapI	RAATTY	4 cut(s)	341, 398, 515, 740
XbaI	TCTAGA	1 cut(s)	269
XceI	RCATGY	1 cut(s)	577
XspI	CTAG	2 cut(s)	270, 372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.