Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010212

Physical Location & Seq

Genomic Coordinates Forward (+)

27075471 .. 27079415

Gene Structure 3945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G261800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 843 bp

ATGGCGAGTGTTGGCAACAGTTGTTTTGGTTCAGTCTTCATAGCTCCTTTTGAAAATGATGTCTTTTTGAAGAAGATTAAGAAATCTCCATGCAATTGTTTCATGGTTTCCAATGATTCCTTCAAATTGAACAAAGTTTCTTGTGGAATTGAAAAGAACCCCACAAGCAGCAGATCCTCCAATTCCAAGAACACGATCGAGGAGTACAACACAGCTATGAAGAGGATGATGAGGAACCCATATGAGTATCACCATGATCTGGGCATGAATTACACATTGATAACTGATGACTTGATTGTGGGCTCCCAGCCTCAGAAACCTGAAGATATAGATCACCTGAAGGAAGAAGAGAATGTGGCATACATTTTGAACTTGCAGCAGGACAAGGATGTTGAGTATTGGGGAATTGACTTGCAGTCAATAATAAAAAGGTGTAAAGAACTTGGAATCCGTCACATGAGGAGGCCGGCAAAGGATTTCGATCCAGATTCCTTGCGAAATTGTCTACCTAAAGCAGTTTCATCGCTAGAATGGGCCATATCTGAGGGAAAAGGAAAGGTTTATGTGCATTGCACTGCTGGACTGGGAAGGGCCCCAGCTGTTGCAATTGCTTACATGTACTGGTTCCTTGGAATGAATCTAAATGCAGCATACGATGCACTAACTTCCAAGAGACCTTGTGGCCCAAATAAGAGGGCAATACGTGGAGCTACCTATGATCTGACCAAGAATGATCCATGGAAGGAGTCCTTTGAGAATCTTCCTGAATATGCATTTGAGGATATAGCAGATTGGGAAAGGAACTTAATTCGAGACCACATCTATTCTCTCCGTGGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009507 GO:0009536 GO:0009987 GO:0016052 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0030246 GO:0030247 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046838 GO:0050308 GO:0071704 GO:1901575 GO:2001070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DSPc

Protein Analysis

281

Amino Acids

31.98

Weight (kDa)

6.99

Isoelectric Point (pI)

51.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10940
fragaria_vesca	FvH4_7g25650 FvH4_7g25650 FvH4_7g25650 FvH4_7g25650
malus_domestica	MD01G1164000.v1.1 MD07G1231700.v1.1
prunus_persica	Prupe.2G261800_v2.0.a1 Prupe.2G261800_v2.0.a1
pyrus_communis	pycom07g20950
rosa_chinensis	RchiOBHm_Chr1g0371831
rosa_laevigata	RLG00000026940
rosa_multiflora	Rmu_co8313211.1_g000001 Rmu_sc0001755.1_g000049
rosa_roxburghii	Rroxscaffold_4G00285420
rosa_rugosa	Rorug01G0366600
rosa_samantha	Rh1AG376600 Rh1BG339900 Rh1CG352900 Rh1DG370900
rosa_wichuraiana	Rw1G033130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	259
AccI	GTMKAC	1 cut(s)	505
AclWI	GGATC	3 cut(s)	168, 476, 728
AcuI	CTGAAG	2 cut(s)	342, 359
AfaI	GTAC	2 cut(s)	206, 620
AfiI	CCNNNNNNNGG	1 cut(s)	259
AflIII	ACRYGT	1 cut(s)	615
AgsI	TTSAA	6 cut(s)	53, 70, 124, 130, 152, 370
AhdI	GACNNNNNGTC	1 cut(s)	415
AjuI	GAANNNNNNNTTGG	2 cut(s)	104, 136
AloI	GAACNNNNNNTCC	2 cut(s)	432, 464
AluBI	AGCT	4 cut(s)	44, 215, 599, 710
AluI	AGCT	4 cut(s)	44, 215, 599, 710
Alw26I	GTCTC	2 cut(s)	667, 807
AlwI	GGATC	3 cut(s)	168, 476, 728
AoxI	GGCC	4 cut(s)	464, 534, 591, 682
ApaI	GGGCCC	1 cut(s)	595
ApeKI	GCWGC	3 cut(s)	168, 376, 647
AspS9I	GGNCC	4 cut(s)	534, 591, 592, 683
AsuHPI	GGTGA	2 cut(s)	242, 326
BaeGI	GKGCMC	1 cut(s)	595
BanII	GRGCYC	2 cut(s)	305, 595
BbsI	GAAGAC	1 cut(s)	28
BbvI	GCAGC	3 cut(s)	180, 388, 659
BcgI	CGANNNNNNTGC	2 cut(s)	504, 538
BcoDI	GTCTC	2 cut(s)	667, 807
BfaI	CTAG	1 cut(s)	527
BisI	GCNGC	3 cut(s)	169, 377, 648
BlsI	GCNGC	3 cut(s)	170, 378, 649
BmeRI	GACNNNNNGTC	1 cut(s)	415
BmgT120I	GGNCC	4 cut(s)	534, 591, 592, 683
BmiI	GGNNCC	5 cut(s)	236, 304, 593, 594, 626
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	1 cut(s)	646
BmuI	ACTGGG	1 cut(s)	593
BpiI	GAAGAC	1 cut(s)	28
BsaAI	YACGTR	1 cut(s)	704
BsaBI	GATNNNNATC	2 cut(s)	330, 480
BsaI	GGTCTC	2 cut(s)	667, 807
BsaJI	CCNNGG	3 cut(s)	628, 737, 832
Bsc4I	CCNNNNNNNGG	1 cut(s)	259
Bse118I	RCCGGY	1 cut(s)	466
Bse1I	ACTGG	2 cut(s)	588, 626
Bse3DI	GCAATG	1 cut(s)	568
Bse8I	GATNNNNATC	2 cut(s)	330, 480
BseDI	CCNNGG	3 cut(s)	628, 737, 832
BseGI	GGATG	2 cut(s)	231, 394
BseJI	GATNNNNATC	2 cut(s)	330, 480
BseLI	CCNNNNNNNGG	1 cut(s)	259
BseMI	GCAATG	1 cut(s)	568
BseMII	CTCAG	2 cut(s)	326, 534
BseNI	ACTGG	2 cut(s)	588, 626
BseRI	GAGGAG	2 cut(s)	215, 475
BseSI	GKGCMC	1 cut(s)	595
BseXI	GCAGC	3 cut(s)	180, 388, 659
BseYI	CCCAGC	2 cut(s)	306, 595
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	4 cut(s)	466, 536, 593, 684
BsiEI	CGRYCG	1 cut(s)	198
BsiSI	CCGG	1 cut(s)	467
BslI	CCNNNNNNNGG	1 cut(s)	259
BsmAI	GTCTC	2 cut(s)	667, 807
BsnI	GGCC	4 cut(s)	466, 536, 593, 684
Bso31I	GGTCTC	2 cut(s)	667, 807
Bsp120I	GGGCCC	1 cut(s)	591
Bsp1286I	GDGCHC	2 cut(s)	305, 595
Bsp143I	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
Bsp19I	CCATGG	1 cut(s)	737
BspANI	GGCC	4 cut(s)	466, 536, 593, 684
BspCNI	CTCAG	2 cut(s)	325, 535
BspLI	GGNNCC	5 cut(s)	236, 304, 593, 594, 626
BspPI	GGATC	3 cut(s)	168, 476, 728
BspTNI	GGTCTC	2 cut(s)	667, 807
BsrDI	GCAATG	1 cut(s)	568
BsrFI	RCCGGY	1 cut(s)	466
BsrI	ACTGG	2 cut(s)	588, 626
BssAI	RCCGGY	1 cut(s)	466
BssECI	CCNNGG	3 cut(s)	628, 737, 832
BssMI	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
BssT1I	CCWWGG	2 cut(s)	628, 737
Bst4CI	ACNGT	1 cut(s)	20
Bst6I	CTCTTC	2 cut(s)	215, 342
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstBAI	YACGTR	1 cut(s)	704
BstC8I	GCNNGC	1 cut(s)	468
BstDEI	CTNAG	2 cut(s)	312, 543
BstDSI	CCRYGG	2 cut(s)	737, 832
BstF5I	GGATG	2 cut(s)	231, 394
BstKTI	GATC	7 cut(s)	176, 198, 259, 334, 484, 721, 736
BstMAI	GTCTC	2 cut(s)	667, 807
BstMBI	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
BstMCI	CGRYCG	1 cut(s)	198
BstMWI	GCNNNNNNNGC	1 cut(s)	656
BstNSI	RCATGY	1 cut(s)	619
BstSLI	GKGCMC	1 cut(s)	595
BstV1I	GCAGC	3 cut(s)	180, 388, 659
BstV2I	GAAGAC	1 cut(s)	28
BstX2I	RGATCY	1 cut(s)	173
BstYI	RGATCY	1 cut(s)	173
BsuRI	GGCC	4 cut(s)	466, 536, 593, 684
BtgI	CCRYGG	2 cut(s)	737, 832
BtgZI	GCGATG	1 cut(s)	507
BtsCI	GGATG	2 cut(s)	231, 394
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	1 cut(s)	573
Cac8I	GCNNGC	1 cut(s)	468
Cfr10I	RCCGGY	1 cut(s)	466
Cfr13I	GGNCC	4 cut(s)	534, 591, 592, 683
Csp6I	GTAC	2 cut(s)	205, 619
CviAII	CATG	7 cut(s)	90, 103, 254, 265, 457, 616, 738
CviQI	GTAC	2 cut(s)	205, 619
DdeI	CTNAG	2 cut(s)	312, 543
DpnI	GATC	7 cut(s)	175, 197, 258, 333, 483, 720, 735
DpnII	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
DriI	GACNNNNNGTC	1 cut(s)	415
Eam1104I	CTCTTC	2 cut(s)	215, 342
Eam1105I	GACNNNNNGTC	1 cut(s)	415
EarI	CTCTTC	2 cut(s)	215, 342
Eco130I	CCWWGG	2 cut(s)	628, 737
Eco24I	GRGCYC	2 cut(s)	305, 595
Eco31I	GGTCTC	2 cut(s)	667, 807
Eco57I	CTGAAG	2 cut(s)	342, 359
EcoO109I	RGGNCCY	2 cut(s)	591, 592
EcoT14I	CCWWGG	2 cut(s)	628, 737
EcoT22I	ATGCAT	1 cut(s)	775
EcoT38I	GRGCYC	2 cut(s)	305, 595
ErhI	CCWWGG	2 cut(s)	628, 737
FaeI	CATG	7 cut(s)	93, 106, 257, 268, 460, 619, 741
FalI	AAGNNNNNCTT	2 cut(s)	734, 766
FatI	CATG	7 cut(s)	89, 102, 253, 264, 456, 615, 737
FauNDI	CATATG	1 cut(s)	241
FblI	GTMKAC	1 cut(s)	505
Fnu4HI	GCNGC	3 cut(s)	169, 377, 648
FokI	GGATG	2 cut(s)	238, 401
FriOI	GRGCYC	2 cut(s)	305, 595
Fsp4HI	GCNGC	3 cut(s)	169, 377, 648
FspBI	CTAG	1 cut(s)	527
GluI	GCNGC	3 cut(s)	169, 377, 648
GsaI	CCCAGC	2 cut(s)	310, 599
HaeIII	GGCC	4 cut(s)	466, 536, 593, 684
HapII	CCGG	1 cut(s)	467
Hin1II	CATG	7 cut(s)	93, 106, 257, 268, 460, 619, 741
HinfI	GANTC	6 cut(s)	116, 447, 488, 637, 746, 757
HpaII	CCGG	1 cut(s)	467
HphI	GGTGA	2 cut(s)	242, 326
Hpy166II	GTNNAC	1 cut(s)	506
Hpy188I	TCNGA	3 cut(s)	315, 544, 723
Hpy188III	TCNNGA	3 cut(s)	485, 764, 812
Hpy8I	GTNNAC	1 cut(s)	506
HpyAV	CCTTC	4 cut(s)	130, 334, 582, 736
HpyCH4III	ACNGT	1 cut(s)	20
HpyCH4IV	ACGT	1 cut(s)	703
HpyCH4V	TGCA	9 cut(s)	93, 376, 415, 568, 573, 605, 647, 659, 773
HpyF10VI	GCNNNNNNNGC	1 cut(s)	656
HpyF3I	CTNAG	2 cut(s)	312, 543
HpySE526I	ACGT	1 cut(s)	703
Hsp92II	CATG	7 cut(s)	93, 106, 257, 268, 460, 619, 741
KroI	GCCGGC	1 cut(s)	466
KroNI	GCCGGC	1 cut(s)	468
Kzo9I	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
LmnI	GCTCC	3 cut(s)	49, 308, 707
Lsp1109I	GCAGC	3 cut(s)	180, 388, 659
LweI	GCATC	1 cut(s)	646
MaeI	CTAG	1 cut(s)	527
MaeII	ACGT	1 cut(s)	703
MaeIII	GTNAC	1 cut(s)	452
MalI	GATC	7 cut(s)	175, 197, 258, 333, 483, 720, 735
MboI	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
MboII	GAAGA	8 cut(s)	28, 82, 85, 232, 335, 356, 359, 752
MfeI	CAATTG	2 cut(s)	94, 606
MflI	RGATCY	1 cut(s)	173
MhlI	GDGCHC	2 cut(s)	305, 595
MluCI	AATT	9 cut(s)	94, 125, 147, 181, 268, 405, 499, 606, 807
MlyI	GAGTC	1 cut(s)	755
Mph1103I	ATGCAT	1 cut(s)	775
MroNI	GCCGGC	1 cut(s)	466
MseI	TTAA	2 cut(s)	78, 806
MslI	CAYNNNNRTG	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	599
MspI	CCGG	1 cut(s)	467
MunI	CAATTG	2 cut(s)	94, 606
MwoI	GCNNNNNNNGC	1 cut(s)	656
NaeI	GCCGGC	1 cut(s)	468
NcoI	CCATGG	1 cut(s)	737
NdeI	CATATG	1 cut(s)	241
NdeII	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
NgoMIV	GCCGGC	1 cut(s)	466
NlaIII	CATG	7 cut(s)	93, 106, 257, 268, 460, 619, 741
NlaIV	GGNNCC	5 cut(s)	236, 304, 593, 594, 626
NmuCI	GTSAC	1 cut(s)	452
NsiI	ATGCAT	1 cut(s)	775
NspI	RCATGY	1 cut(s)	619
PciI	ACATGT	1 cut(s)	615
PdiI	GCCGGC	1 cut(s)	468
PfeI	GAWTC	5 cut(s)	116, 447, 488, 637, 757
PflMI	CCANNNNNTGG	1 cut(s)	259
PkrI	GCNGC	3 cut(s)	170, 378, 649
Ple19I	CGATCG	1 cut(s)	198
PleI	GAGTC	1 cut(s)	754
PpsI	GAGTC	1 cut(s)	754
Ppu21I	YACGTR	1 cut(s)	704
PscI	ACATGT	1 cut(s)	615
PspFI	CCCAGC	2 cut(s)	306, 595
PspN4I	GGNNCC	5 cut(s)	236, 304, 593, 594, 626
PspOMI	GGGCCC	1 cut(s)	591
PspPI	GGNCC	4 cut(s)	534, 591, 592, 683
PsuI	RGATCY	1 cut(s)	173
PvuI	CGATCG	1 cut(s)	198
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	2 cut(s)	206, 620
RsaNI	GTAC	2 cut(s)	205, 619
RseI	CAYNNNNRTG	1 cut(s)	215
SaqAI	TTAA	2 cut(s)	78, 806
SatI	GCNGC	3 cut(s)	169, 377, 648
Sau3AI	GATC	7 cut(s)	173, 195, 256, 331, 481, 718, 733
Sau96I	GGNCC	4 cut(s)	534, 591, 592, 683
SchI	GAGTC	1 cut(s)	755
SduI	GDGCHC	2 cut(s)	305, 595
SfaNI	GCATC	1 cut(s)	646
SmiMI	CAYNNNNRTG	1 cut(s)	215
Sse9I	AATT	9 cut(s)	94, 125, 147, 181, 268, 405, 499, 606, 807
SspMI	CTAG	1 cut(s)	527
StyI	CCWWGG	2 cut(s)	628, 737
TaaI	ACNGT	1 cut(s)	20
TaiI	ACGT	1 cut(s)	706
TaqI	TCGA	3 cut(s)	198, 480, 811
TasI	AATT	9 cut(s)	94, 125, 147, 181, 268, 405, 499, 606, 807
TatI	WGTACW	2 cut(s)	204, 618
TfiI	GAWTC	5 cut(s)	116, 447, 488, 637, 757
Tru1I	TTAA	2 cut(s)	78, 806
Tru9I	TTAA	2 cut(s)	78, 806
TscAI	CASTG	1 cut(s)	580
TseFI	GTSAC	1 cut(s)	452
TseI	GCWGC	3 cut(s)	168, 376, 647
Tsp45I	GTSAC	1 cut(s)	452
TspDTI	ATGAA	6 cut(s)	28, 91, 233, 281, 510, 650
TspGWI	ACGGA	2 cut(s)	440, 821
TspRI	CASTG	1 cut(s)	580
Van91I	CCANNNNNTGG	1 cut(s)	259
XceI	RCATGY	1 cut(s)	619
XmiI	GTMKAC	1 cut(s)	505
XspI	CTAG	1 cut(s)	527
Zsp2I	ATGCAT	1 cut(s)	775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.