Pentatricopeptide repeat-containing protein At5g66520-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14170 AT4G14170 |
| fragaria_vesca | FvH4_7g28451 |
| malus_domestica | MD01G1188300.v1.1 |
| prunus_persica | Prupe.2G284600_v2.0.a1 |
| pyrus_communis | pycom01g20010 |
| rosa_chinensis | RchiOBHm_Chr1g0375631 RchiOBHm_Chr1g0375671 |
| rosa_laevigata | RLG00000026661 |
| rosa_multiflora | Rmu_co8281021.1_g000001 Rmu_co8425983.1_g000001 Rmu_sc0001644.1_g000022 |
| rosa_roxburghii | Rroxscaffold_4G00282680 |
| rosa_rugosa | Rorug01G0391700 |
| rosa_samantha | Rh1AG402600 Rh1BG366800 Rh1CG379500 |
| rosa_wichuraiana | Rw1G035750 Rw1G035770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1226 |
| AciI | CCGC | 3 cut(s) | 150, 390, 1151 |
| AclWI | GGATC | 3 cut(s) | 209, 222, 1525 |
| AcoI | YGGCCR | 1 cut(s) | 677 |
| AcsI | RAATTY | 4 cut(s) | 69, 457, 643, 1502 |
| AfaI | GTAC | 5 cut(s) | 262, 476, 508, 821, 881 |
| AflII | CTTAAG | 1 cut(s) | 62 |
| AflIII | ACRYGT | 1 cut(s) | 876 |
| AgsI | TTSAA | 9 cut(s) | 46, 455, 601, 668, 1148, 1208, 1481, 1502, 1604 |
| AhlI | ACTAGT | 1 cut(s) | 719 |
| AjnI | CCWGG | 2 cut(s) | 837, 1462 |
| AluBI | AGCT | 8 cut(s) | 61, 119, 773, 866, 959, 1076, 1156, 1394 |
| AluI | AGCT | 8 cut(s) | 61, 119, 773, 866, 959, 1076, 1156, 1394 |
| Alw21I | GWGCWC | 4 cut(s) | 20, 505, 781, 1084 |
| Alw26I | GTCTC | 3 cut(s) | 96, 140, 347 |
| Alw44I | GTGCAC | 1 cut(s) | 501 |
| AlwI | GGATC | 3 cut(s) | 209, 222, 1525 |
| Ama87I | CYCGRG | 1 cut(s) | 35 |
| AoxI | GGCC | 6 cut(s) | 204, 397, 677, 687, 835, 1577 |
| ApaLI | GTGCAC | 1 cut(s) | 501 |
| ApeKI | GCWGC | 3 cut(s) | 188, 770, 1153 |
| ApoI | RAATTY | 4 cut(s) | 69, 457, 643, 1502 |
| AspLEI | GCGC | 1 cut(s) | 1324 |
| AspS9I | GGNCC | 3 cut(s) | 204, 291, 1577 |
| AsuC2I | CCSGG | 1 cut(s) | 1198 |
| AsuHPI | GGTGA | 3 cut(s) | 737, 1048, 1512 |
| AvaI | CYCGRG | 1 cut(s) | 35 |
| AvaII | GGWCC | 1 cut(s) | 291 |
| AxyI | CCTNAGG | 1 cut(s) | 824 |
| BaeGI | GKGCMC | 1 cut(s) | 505 |
| BamHI | GGATCC | 1 cut(s) | 214 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1121, 1153 |
| BauI | CACGAG | 1 cut(s) | 373 |
| Bbv12I | GWGCWC | 4 cut(s) | 20, 505, 781, 1084 |
| BbvI | GCAGC | 3 cut(s) | 175, 782, 1165 |
| BccI | CCATC | 4 cut(s) | 317, 380, 1015, 1481 |
| BciT130I | CCWGG | 2 cut(s) | 839, 1464 |
| BciVI | GTATCC | 1 cut(s) | 934 |
| BclI | TGATCA | 2 cut(s) | 243, 796 |
| BcnI | CCSGG | 1 cut(s) | 1198 |
| BcoDI | GTCTC | 3 cut(s) | 96, 140, 347 |
| BcuI | ACTAGT | 1 cut(s) | 719 |
| BfaI | CTAG | 2 cut(s) | 720, 1470 |
| BfrI | CTTAAG | 1 cut(s) | 62 |
| BfuI | GTATCC | 1 cut(s) | 934 |
| BisI | GCNGC | 4 cut(s) | 189, 391, 771, 1154 |
| BlsI | GCNGC | 4 cut(s) | 190, 392, 772, 1155 |
| Bme1390I | CCNGG | 3 cut(s) | 839, 1198, 1464 |
| Bme18I | GGWCC | 1 cut(s) | 291 |
| BmeT110I | CYCGRG | 1 cut(s) | 35 |
| BmgT120I | GGNCC | 3 cut(s) | 204, 291, 1577 |
| BmiI | GGNNCC | 4 cut(s) | 216, 292, 1344, 1578 |
| BmrFI | CCNGG | 3 cut(s) | 839, 1198, 1464 |
| BmrI | ACTGGG | 2 cut(s) | 666, 1041 |
| BmsI | GCATC | 1 cut(s) | 1240 |
| BmuI | ACTGGG | 2 cut(s) | 666, 1041 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1058 |
| BpmI | CTGGAG | 1 cut(s) | 860 |
| BpuMI | CCSGG | 1 cut(s) | 1198 |
| BsaAI | YACGTR | 1 cut(s) | 506 |
| BsaBI | GATNNNNATC | 1 cut(s) | 219 |
| BsaJI | CCNNGG | 4 cut(s) | 690, 982, 1462, 1580 |
| BsaWI | WCCGGW | 1 cut(s) | 739 |
| Bse1I | ACTGG | 3 cut(s) | 661, 759, 1036 |
| Bse21I | CCTNAGG | 1 cut(s) | 824 |
| Bse8I | GATNNNNATC | 1 cut(s) | 219 |
| BseBI | CCWGG | 2 cut(s) | 839, 1464 |
| BseDI | CCNNGG | 4 cut(s) | 690, 982, 1462, 1580 |
| BseGI | GGATG | 3 cut(s) | 274, 541, 899 |
| BseJI | GATNNNNATC | 1 cut(s) | 219 |
| BseMII | CTCAG | 1 cut(s) | 815 |
| BseNI | ACTGG | 3 cut(s) | 661, 759, 1036 |
| BseRI | GAGGAG | 2 cut(s) | 53, 841 |
| BseSI | GKGCMC | 1 cut(s) | 505 |
| BseXI | GCAGC | 3 cut(s) | 175, 782, 1165 |
| BshFI | GGCC | 6 cut(s) | 206, 399, 679, 689, 837, 1579 |
| BsiHKAI | GWGCWC | 4 cut(s) | 20, 505, 781, 1084 |
| BsiHKCI | CYCGRG | 1 cut(s) | 35 |
| BsiSI | CCGG | 3 cut(s) | 400, 740, 1197 |
| BslFI | GGGAC | 2 cut(s) | 874, 1445 |
| BsmAI | GTCTC | 3 cut(s) | 96, 140, 347 |
| BsmBI | CGTCTC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 2 cut(s) | 874, 1445 |
| BsmI | GAATGC | 1 cut(s) | 374 |
| BsnI | GGCC | 6 cut(s) | 206, 399, 679, 689, 837, 1579 |
| BsoBI | CYCGRG | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 4 cut(s) | 20, 505, 781, 1084 |
| Bsp1407I | TGTACA | 1 cut(s) | 260 |
| Bsp143I | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| Bsp19I | CCATGG | 1 cut(s) | 982 |
| BspACI | CCGC | 3 cut(s) | 150, 390, 1151 |
| BspANI | GGCC | 6 cut(s) | 206, 399, 679, 689, 837, 1579 |
| BspCNI | CTCAG | 1 cut(s) | 816 |
| BspHI | TCATGA | 1 cut(s) | 240 |
| BspLI | GGNNCC | 4 cut(s) | 216, 292, 1344, 1578 |
| BspPI | GGATC | 3 cut(s) | 209, 222, 1525 |
| BspTI | CTTAAG | 1 cut(s) | 62 |
| BsrGI | TGTACA | 1 cut(s) | 260 |
| BsrI | ACTGG | 3 cut(s) | 661, 759, 1036 |
| BssECI | CCNNGG | 4 cut(s) | 690, 982, 1462, 1580 |
| BssMI | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| BssSI | CACGAG | 1 cut(s) | 373 |
| BssT1I | CCWWGG | 3 cut(s) | 690, 982, 1580 |
| Bst2BI | CACGAG | 1 cut(s) | 373 |
| Bst2UI | CCWGG | 2 cut(s) | 839, 1464 |
| Bst4CI | ACNGT | 3 cut(s) | 884, 1221, 1588 |
| Bst6I | CTCTTC | 1 cut(s) | 1203 |
| BstAFI | CTTAAG | 1 cut(s) | 62 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 776 |
| BstAUI | TGTACA | 1 cut(s) | 260 |
| BstBAI | YACGTR | 1 cut(s) | 506 |
| BstC8I | GCNNGC | 5 cut(s) | 20, 816, 1171, 1235, 1320 |
| BstDEI | CTNAG | 3 cut(s) | 11, 824, 1187 |
| BstDSI | CCRYGG | 1 cut(s) | 982 |
| BstF5I | GGATG | 3 cut(s) | 274, 541, 899 |
| BstHHI | GCGC | 1 cut(s) | 1324 |
| BstKTI | GATC | 6 cut(s) | 217, 246, 717, 750, 799, 1520 |
| BstMAI | GTCTC | 3 cut(s) | 96, 140, 347 |
| BstMBI | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 307, 396, 776, 956, 1243 |
| BstNI | CCWGG | 2 cut(s) | 839, 1464 |
| BstNSI | RCATGY | 5 cut(s) | 486, 818, 880, 1173, 1237 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1058 |
| BstSCI | CCNGG | 3 cut(s) | 837, 1196, 1462 |
| BstSLI | GKGCMC | 1 cut(s) | 505 |
| BstV1I | GCAGC | 3 cut(s) | 175, 782, 1165 |
| BstX2I | RGATCY | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 989 |
| BstYI | RGATCY | 1 cut(s) | 214 |
| Bsu36I | CCTNAGG | 1 cut(s) | 824 |
| BsuI | GTATCC | 1 cut(s) | 934 |
| BsuRI | GGCC | 6 cut(s) | 206, 399, 679, 689, 837, 1579 |
| BtgI | CCRYGG | 1 cut(s) | 982 |
| BtgZI | GCGATG | 1 cut(s) | 336 |
| BtsCI | GGATG | 3 cut(s) | 274, 541, 899 |
| BtsIMutI | CAGTG | 2 cut(s) | 766, 975 |
| Cac8I | GCNNGC | 5 cut(s) | 20, 816, 1171, 1235, 1320 |
| CciI | TCATGA | 1 cut(s) | 240 |
| CfoI | GCGC | 1 cut(s) | 1324 |
| Cfr13I | GGNCC | 3 cut(s) | 204, 291, 1577 |
| Csp6I | GTAC | 5 cut(s) | 261, 475, 507, 820, 880 |
| CviQI | GTAC | 5 cut(s) | 261, 475, 507, 820, 880 |
| DdeI | CTNAG | 3 cut(s) | 11, 824, 1187 |
| DpnI | GATC | 6 cut(s) | 216, 245, 716, 749, 798, 1519 |
| DpnII | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| DraI | TTTAAA | 1 cut(s) | 1015 |
| EaeI | YGGCCR | 1 cut(s) | 677 |
| Eam1104I | CTCTTC | 1 cut(s) | 1203 |
| EarI | CTCTTC | 1 cut(s) | 1203 |
| EciI | GGCGGA | 1 cut(s) | 139 |
| Eco130I | CCWWGG | 3 cut(s) | 690, 982, 1580 |
| Eco147I | AGGCCT | 1 cut(s) | 689 |
| Eco47I | GGWCC | 1 cut(s) | 291 |
| Eco81I | CCTNAGG | 1 cut(s) | 824 |
| Eco88I | CYCGRG | 1 cut(s) | 35 |
| EcoO109I | RGGNCCY | 2 cut(s) | 291, 1577 |
| EcoRI | GAATTC | 1 cut(s) | 643 |
| EcoRII | CCWGG | 2 cut(s) | 837, 1462 |
| EcoT14I | CCWWGG | 3 cut(s) | 690, 982, 1580 |
| EcoT22I | ATGCAT | 3 cut(s) | 1171, 1175, 1255 |
| ErhI | CCWWGG | 3 cut(s) | 690, 982, 1580 |
| Esp3I | CGTCTC | 1 cut(s) | 140 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 674, 706, 1564, 1596 |
| FaqI | GGGAC | 2 cut(s) | 874, 1445 |
| FauNDI | CATATG | 1 cut(s) | 253 |
| FbaI | TGATCA | 2 cut(s) | 243, 796 |
| Fnu4HI | GCNGC | 4 cut(s) | 189, 391, 771, 1154 |
| FokI | GGATG | 3 cut(s) | 281, 548, 906 |
| Fsp4HI | GCNGC | 4 cut(s) | 189, 391, 771, 1154 |
| FspBI | CTAG | 2 cut(s) | 720, 1470 |
| GlaI | GCGC | 1 cut(s) | 1323 |
| GluI | GCNGC | 4 cut(s) | 189, 391, 771, 1154 |
| GsuI | CTGGAG | 1 cut(s) | 860 |
| HaeIII | GGCC | 6 cut(s) | 206, 399, 679, 689, 837, 1579 |
| HapII | CCGG | 3 cut(s) | 400, 740, 1197 |
| HhaI | GCGC | 1 cut(s) | 1324 |
| Hin6I | GCGC | 1 cut(s) | 1322 |
| HinP1I | GCGC | 1 cut(s) | 1322 |
| HincII | GTYRAC | 2 cut(s) | 874, 1369 |
| HindII | GTYRAC | 2 cut(s) | 874, 1369 |
| HindIII | AAGCTT | 1 cut(s) | 117 |
| HinfI | GANTC | 6 cut(s) | 161, 167, 220, 583, 601, 1419 |
| HpaI | GTTAAC | 1 cut(s) | 1369 |
| HpaII | CCGG | 3 cut(s) | 400, 740, 1197 |
| HphI | GGTGA | 3 cut(s) | 737, 1048, 1512 |
| Hpy166II | GTNNAC | 6 cut(s) | 261, 503, 874, 901, 1138, 1369 |
| Hpy188I | TCNGA | 7 cut(s) | 160, 166, 219, 248, 495, 1277, 1350 |
| Hpy188III | TCNNGA | 5 cut(s) | 46, 241, 587, 923, 1499 |
| Hpy8I | GTNNAC | 6 cut(s) | 261, 503, 874, 901, 1138, 1369 |
| HpyCH4III | ACNGT | 3 cut(s) | 884, 1221, 1588 |
| HpyCH4IV | ACGT | 3 cut(s) | 228, 237, 505 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 307, 396, 776, 956, 1243 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 824, 1187 |
| HpySE526I | ACGT | 3 cut(s) | 228, 237, 505 |
| HspAI | GCGC | 1 cut(s) | 1322 |
| Ksp22I | TGATCA | 2 cut(s) | 243, 796 |
| KspAI | GTTAAC | 1 cut(s) | 1369 |
| Kzo9I | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| LmnI | GCTCC | 1 cut(s) | 15 |
| Lsp1109I | GCAGC | 3 cut(s) | 175, 782, 1165 |
| LweI | GCATC | 1 cut(s) | 1240 |
| MaeI | CTAG | 2 cut(s) | 720, 1470 |
| MaeII | ACGT | 3 cut(s) | 228, 237, 505 |
| MaeIII | GTNAC | 1 cut(s) | 1051 |
| MalI | GATC | 6 cut(s) | 216, 245, 716, 749, 798, 1519 |
| MboI | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| MboII | GAAGA | 4 cut(s) | 136, 273, 625, 1220 |
| MfeI | CAATTG | 2 cut(s) | 753, 792 |
| MflI | RGATCY | 1 cut(s) | 214 |
| MhlI | GDGCHC | 4 cut(s) | 20, 505, 781, 1084 |
| MmeI | TCCRAC | 1 cut(s) | 507 |
| Mph1103I | ATGCAT | 3 cut(s) | 1171, 1175, 1255 |
| MslI | CAYNNNNRTG | 3 cut(s) | 256, 786, 1238 |
| MspCI | CTTAAG | 1 cut(s) | 62 |
| MspI | CCGG | 3 cut(s) | 400, 740, 1197 |
| MspR9I | CCNGG | 3 cut(s) | 839, 1198, 1464 |
| MunI | CAATTG | 2 cut(s) | 753, 792 |
| Mva1269I | GAATGC | 1 cut(s) | 374 |
| MvaI | CCWGG | 2 cut(s) | 839, 1464 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 307, 396, 776, 956, 1243 |
| NciI | CCSGG | 1 cut(s) | 1198 |
| NcoI | CCATGG | 1 cut(s) | 982 |
| NdeI | CATATG | 1 cut(s) | 253 |
| NdeII | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| NlaIV | GGNNCC | 4 cut(s) | 216, 292, 1344, 1578 |
| NmuCI | GTSAC | 1 cut(s) | 1051 |
| NsiI | ATGCAT | 3 cut(s) | 1171, 1175, 1255 |
| NspI | RCATGY | 5 cut(s) | 486, 818, 880, 1173, 1237 |
| PaeI | GCATGC | 3 cut(s) | 818, 1173, 1237 |
| PaeR7I | CTCGAG | 1 cut(s) | 35 |
| PagI | TCATGA | 1 cut(s) | 240 |
| PceI | AGGCCT | 1 cut(s) | 689 |
| PciI | ACATGT | 1 cut(s) | 876 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 234 |
| PctI | GAATGC | 1 cut(s) | 374 |
| PfeI | GAWTC | 6 cut(s) | 161, 167, 220, 583, 601, 1419 |
| PkrI | GCNGC | 4 cut(s) | 190, 392, 772, 1155 |
| Ppu21I | YACGTR | 1 cut(s) | 506 |
| PpuMI | RGGWCCY | 1 cut(s) | 291 |
| PscI | ACATGT | 1 cut(s) | 876 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1058 |
| PsiI | TTATAA | 1 cut(s) | 1226 |
| Psp5II | RGGWCCY | 1 cut(s) | 291 |
| Psp6I | CCWGG | 2 cut(s) | 837, 1462 |
| PspGI | CCWGG | 2 cut(s) | 837, 1462 |
| PspN4I | GGNNCC | 4 cut(s) | 216, 292, 1344, 1578 |
| PspPI | GGNCC | 3 cut(s) | 204, 291, 1577 |
| PspPPI | RGGWCCY | 1 cut(s) | 291 |
| PspXI | VCTCGAGB | 1 cut(s) | 35 |
| PsuI | RGATCY | 1 cut(s) | 214 |
| RsaI | GTAC | 5 cut(s) | 262, 476, 508, 821, 881 |
| RsaNI | GTAC | 5 cut(s) | 261, 475, 507, 820, 880 |
| RseI | CAYNNNNRTG | 3 cut(s) | 256, 786, 1238 |
| SatI | GCNGC | 4 cut(s) | 189, 391, 771, 1154 |
| Sau3AI | GATC | 6 cut(s) | 214, 243, 714, 747, 796, 1517 |
| Sau96I | GGNCC | 3 cut(s) | 204, 291, 1577 |
| ScrFI | CCNGG | 3 cut(s) | 839, 1198, 1464 |
| SduI | GDGCHC | 4 cut(s) | 20, 505, 781, 1084 |
| SfaNI | GCATC | 1 cut(s) | 1240 |
| Sfr274I | CTCGAG | 1 cut(s) | 35 |
| SinI | GGWCC | 1 cut(s) | 291 |
| SlaI | CTCGAG | 1 cut(s) | 35 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 256, 786, 1238 |
| SmlI | CTYRAG | 2 cut(s) | 35, 62 |
| SmoI | CTYRAG | 2 cut(s) | 35, 62 |
| SpeI | ACTAGT | 1 cut(s) | 719 |
| SphI | GCATGC | 3 cut(s) | 818, 1173, 1237 |
| SseBI | AGGCCT | 1 cut(s) | 689 |
| SsiI | CCGC | 3 cut(s) | 150, 390, 1151 |
| SspMI | CTAG | 2 cut(s) | 720, 1470 |
| StuI | AGGCCT | 1 cut(s) | 689 |
| StyD4I | CCNGG | 3 cut(s) | 837, 1196, 1462 |
| StyI | CCWWGG | 3 cut(s) | 690, 982, 1580 |
| TaaI | ACNGT | 3 cut(s) | 884, 1221, 1588 |
| TaiI | ACGT | 3 cut(s) | 231, 240, 508 |
| TaqI | TCGA | 3 cut(s) | 36, 554, 1302 |
| TatI | WGTACW | 2 cut(s) | 260, 474 |
| TauI | GCSGC | 1 cut(s) | 393 |
| TfiI | GAWTC | 6 cut(s) | 161, 167, 220, 583, 601, 1419 |
| TscAI | CASTG | 2 cut(s) | 766, 975 |
| TseFI | GTSAC | 1 cut(s) | 1051 |
| TseI | GCWGC | 3 cut(s) | 188, 770, 1153 |
| Tsp45I | GTSAC | 1 cut(s) | 1051 |
| TspDTI | ATGAA | 8 cut(s) | 62, 285, 534, 632, 720, 1142, 1256, 1448 |
| TspGWI | ACGGA | 1 cut(s) | 342 |
| TspRI | CASTG | 2 cut(s) | 766, 975 |
| Vha464I | CTTAAG | 1 cut(s) | 62 |
| VneI | GTGCAC | 1 cut(s) | 501 |
| VpaK11BI | GGWCC | 1 cut(s) | 291 |
| XapI | RAATTY | 4 cut(s) | 69, 457, 643, 1502 |
| XceI | RCATGY | 5 cut(s) | 486, 818, 880, 1173, 1237 |
| XhoI | CTCGAG | 1 cut(s) | 35 |
| XspI | CTAG | 2 cut(s) | 720, 1470 |
| Zsp2I | ATGCAT | 3 cut(s) | 1171, 1175, 1255 |