Prupe.2G292600_v2.0.a1
ERF Family

Belongs to the small GTPase superfamily. Arf family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0010068
Physical Location & Seq
Forward (+)
28545899 .. 28549052
3154 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G292600.2

Sequence Viewer

Length: 618 bp
ATGTTTTCGTTGTTTTATGGACTCTGGAAATATATGTTCAGTAAGACAGAGTTTCATGTACTCATTCTTGGAATCGACAAAGCTGGGAAAACGACTTTGCTCGAGAAGTTGAAATCACTTTACTCAAACTTGGAAGGTCTCCCTCCTGATCGAATTGTTCCAACTGTGGGACTTAATATTGGTCGTATTGAAGCATCAAATACCAAACTTGTGTTCTGGGATCTGGGAGGTCAGCCTGGTCTTCGCTCAATCTGGGAAAAATATTATGAAGAAGCACATGCCGTGGTCTATGTAATTGATGCCACTTGTCCTTTACGTTTTGAAGATTCAAAATCTGCATTGGAAAAAGTTCTTCGGCATGAGGATTTGCAAGGAGCTCCTCTATTGATTTTGGCCAACAAGCAGGATCTTGCTGATAGTGTATCAGCTGAGGAACTTGCTCGATATCTAGATCTTAAAAAGTTGGATGAAAGGGTTTATATGTTTGAAGCCGTTTCAGCATATGATGGGATGGGGATTAAAGAAAGTGTGGAGTGGTTGGTGGAGGTAATGGAGAGAAGCAAGAGAACTGAAATGTTGAGAGCCCGTGCAGGAGCAACAGGCCCTGCTTCTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arf

Protein Analysis

206

Amino Acids

23.17

Weight (kDa)

5.53

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 228, 414
AcoI YGGCCR 1 cut(s) 393
AfaI GTAC 1 cut(s) 60
AfiI CCNNNNNNNGG 1 cut(s) 167
AgsI TTSAA 5 cut(s) 112, 191, 323, 330, 488
AjnI CCWGG 1 cut(s) 235
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AluBI AGCT 3 cut(s) 83, 377, 428
AluI AGCT 3 cut(s) 83, 377, 428
Alw21I GWGCWC 1 cut(s) 379
Alw26I GTCTC 1 cut(s) 143
AlwI GGATC 2 cut(s) 228, 414
AlwNI CAGNNNCTG 1 cut(s) 605
Ama87I CYCGRG 1 cut(s) 101
AoxI GGCC 2 cut(s) 393, 601
Asp700I GAANNNNTTC 1 cut(s) 348
AspS9I GGNCC 1 cut(s) 602
AvaI CYCGRG 1 cut(s) 101
BalI TGGCCA 1 cut(s) 395
BanII GRGCYC 2 cut(s) 379, 586
BbsI GAAGAC 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 379
BbvCI CCTCAGC 1 cut(s) 429
BccI CCATC 2 cut(s) 500, 505
BceAI ACGGC 2 cut(s) 266, 476
BciT130I CCWGG 1 cut(s) 237
BcoDI GTCTC 1 cut(s) 143
BfaI CTAG 2 cut(s) 449, 616
BglII AGATCT 1 cut(s) 451
Bme1390I CCNGG 1 cut(s) 237
BmeT110I CYCGRG 1 cut(s) 101
BmgT120I GGNCC 1 cut(s) 602
BmrFI CCNGG 1 cut(s) 237
BmsI GCATC 2 cut(s) 203, 289
BpiI GAAGAC 1 cut(s) 233
Bpu10I CCTNAGC 1 cut(s) 429
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 1 cut(s) 282
Bsc4I CCNNNNNNNGG 1 cut(s) 167
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 1 cut(s) 282
BseGI GGATG 2 cut(s) 472, 516
BseLI CCNNNNNNNGG 1 cut(s) 167
BseMII CTCAG 1 cut(s) 420
BseRI GAGGAG 1 cut(s) 369
BseYI CCCAGC 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 609
BshFI GGCC 2 cut(s) 395, 603
BsiHKAI GWGCWC 1 cut(s) 379
BsiHKCI CYCGRG 1 cut(s) 101
BslFI GGGAC 1 cut(s) 183
BslI CCNNNNNNNGG 1 cut(s) 167
BsmAI GTCTC 1 cut(s) 143
BsmFI GGGAC 1 cut(s) 183
BsnI GGCC 2 cut(s) 395, 603
Bso31I GGTCTC 1 cut(s) 143
BsoBI CYCGRG 1 cut(s) 101
Bsp1286I GDGCHC 2 cut(s) 379, 586
Bsp143I GATC 4 cut(s) 148, 220, 406, 451
BspANI GGCC 2 cut(s) 395, 603
BspCNI CTCAG 1 cut(s) 421
BspPI GGATC 2 cut(s) 228, 414
BspTNI GGTCTC 1 cut(s) 143
BssECI CCNNGG 1 cut(s) 282
BssMI GATC 4 cut(s) 148, 220, 406, 451
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 1 cut(s) 166
BstDEI CTNAG 1 cut(s) 429
BstDSI CCRYGG 1 cut(s) 282
BstF5I GGATG 2 cut(s) 472, 516
BstKTI GATC 4 cut(s) 151, 223, 409, 454
BstMAI GTCTC 1 cut(s) 143
BstMBI GATC 4 cut(s) 148, 220, 406, 451
BstMWI GCNNNNNNNGC 1 cut(s) 497
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 1 cut(s) 281
BstSCI CCNGG 1 cut(s) 235
BstV2I GAAGAC 1 cut(s) 233
BstX2I RGATCY 3 cut(s) 220, 406, 451
BstYI RGATCY 3 cut(s) 220, 406, 451
BsuRI GGCC 2 cut(s) 395, 603
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 472, 516
CaiI CAGNNNCTG 1 cut(s) 605
Cfr13I GGNCC 1 cut(s) 602
Csp6I GTAC 1 cut(s) 59
CviAII CATG 3 cut(s) 56, 278, 359
CviJI RGCY 8 cut(s) 83, 235, 377, 395, 428, 491, 584, 603
CviKI_1 RGCY 8 cut(s) 83, 235, 377, 395, 428, 491, 584, 603
CviQI GTAC 1 cut(s) 59
DdeI CTNAG 1 cut(s) 429
DpnI GATC 4 cut(s) 150, 222, 408, 453
DpnII GATC 4 cut(s) 148, 220, 406, 451
EaeI YGGCCR 1 cut(s) 393
Ecl136II GAGCTC 1 cut(s) 377
Eco24I GRGCYC 2 cut(s) 379, 586
Eco31I GGTCTC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 446
Eco53kI GAGCTC 1 cut(s) 377
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 377
EcoO109I RGGNCCY 1 cut(s) 602
EcoRII CCWGG 1 cut(s) 235
EcoRV GATATC 1 cut(s) 446
EcoT38I GRGCYC 2 cut(s) 379, 586
FaeI CATG 3 cut(s) 59, 281, 362
FaqI GGGAC 1 cut(s) 183
FatI CATG 3 cut(s) 55, 277, 358
FauNDI CATATG 1 cut(s) 502
FokI GGATG 2 cut(s) 479, 523
FriOI GRGCYC 2 cut(s) 379, 586
FspBI CTAG 2 cut(s) 449, 616
GsaI CCCAGC 1 cut(s) 87
HaeIII GGCC 2 cut(s) 395, 603
Hin1II CATG 3 cut(s) 59, 281, 362
HinfI GANTC 3 cut(s) 21, 72, 326
Hpy188III TCNNGA 4 cut(s) 25, 103, 146, 449
HpyAV CCTTC 1 cut(s) 128
HpyCH4III ACNGT 1 cut(s) 166
HpyCH4IV ACGT 1 cut(s) 316
HpyCH4V TGCA 3 cut(s) 338, 370, 590
HpyF10VI GCNNNNNNNGC 1 cut(s) 497
HpyF3I CTNAG 1 cut(s) 429
HpySE526I ACGT 1 cut(s) 316
Hsp92II CATG 3 cut(s) 59, 281, 362
Kzo9I GATC 4 cut(s) 148, 220, 406, 451
LmnI GCTCC 3 cut(s) 374, 382, 593
LweI GCATC 2 cut(s) 203, 289
MaeI CTAG 2 cut(s) 449, 616
MaeII ACGT 1 cut(s) 316
MalI GATC 4 cut(s) 150, 222, 408, 453
MboI GATC 4 cut(s) 148, 220, 406, 451
MboII GAAGA 4 cut(s) 233, 281, 335, 344
MflI RGATCY 3 cut(s) 220, 406, 451
MhlI GDGCHC 2 cut(s) 379, 586
MlsI TGGCCA 1 cut(s) 395
MluCI AATT 2 cut(s) 153, 294
MluNI TGGCCA 1 cut(s) 395
MlyI GAGTC 1 cut(s) 15
MmeI TCCRAC 2 cut(s) 185, 444
MnlI CCTC 6 cut(s) 153, 221, 355, 390, 424, 538
Mox20I TGGCCA 1 cut(s) 395
MroXI GAANNNNTTC 1 cut(s) 348
MscI TGGCCA 1 cut(s) 395
MseI TTAA 3 cut(s) 174, 456, 519
Msp20I TGGCCA 1 cut(s) 395
MspA1I CMGCKG 1 cut(s) 428
MspR9I CCNGG 1 cut(s) 237
MvaI CCWGG 1 cut(s) 237
MwoI GCNNNNNNNGC 1 cut(s) 497
NdeI CATATG 1 cut(s) 502
NdeII GATC 4 cut(s) 148, 220, 406, 451
NlaIII CATG 3 cut(s) 59, 281, 362
NspI RCATGY 1 cut(s) 281
PaeR7I CTCGAG 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 2 cut(s) 72, 326
PleI GAGTC 1 cut(s) 15
PpsI GAGTC 1 cut(s) 15
Psp124BI GAGCTC 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 235
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 1 cut(s) 235
PspPI GGNCC 1 cut(s) 602
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 3 cut(s) 220, 406, 451
PvuII CAGCTG 1 cut(s) 428
RsaI GTAC 1 cut(s) 60
RsaNI GTAC 1 cut(s) 59
SacI GAGCTC 1 cut(s) 379
SaqAI TTAA 3 cut(s) 174, 456, 519
Sau3AI GATC 4 cut(s) 148, 220, 406, 451
Sau96I GGNCC 1 cut(s) 602
SchI GAGTC 1 cut(s) 15
ScrFI CCNGG 1 cut(s) 237
SduI GDGCHC 2 cut(s) 379, 586
SetI ASST 7 cut(s) 85, 139, 232, 319, 379, 430, 549
SfaNI GCATC 2 cut(s) 203, 289
Sfr274I CTCGAG 1 cut(s) 101
SlaI CTCGAG 1 cut(s) 101
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
Sse9I AATT 2 cut(s) 153, 294
SspI AATATT 2 cut(s) 178, 263
SspMI CTAG 2 cut(s) 449, 616
SstI GAGCTC 1 cut(s) 379
StyD4I CCNGG 1 cut(s) 235
TaaI ACNGT 1 cut(s) 166
TaiI ACGT 1 cut(s) 319
TaqI TCGA 4 cut(s) 75, 102, 151, 442
TasI AATT 2 cut(s) 153, 294
TatI WGTACW 1 cut(s) 58
TfiI GAWTC 2 cut(s) 72, 326
Tru1I TTAA 3 cut(s) 174, 456, 519
Tru9I TTAA 3 cut(s) 174, 456, 519
TspDTI ATGAA 3 cut(s) 44, 282, 483
XbaI TCTAGA 1 cut(s) 448
XceI RCATGY 1 cut(s) 281
XhoI CTCGAG 1 cut(s) 101
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 2 cut(s) 449, 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.