Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008626

Physical Location & Seq

Genomic Coordinates Forward (+)

50919636 .. 50923481

Gene Structure 3846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0400600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGATGAGGCAGGAAAACCATGGCGACGAAATTTCCGACCTCCGCGAATCCCAAGACGAGATGGAATCTCTGGTCCTCGACGAACCACCTTCATCATCCAACGGCCAGTCTTCTCCCTCCTCCTCCGCCGCCGCCGCCGCACCACCATCAGCCGTCATAGACCGCCAGACTTCTGCCTCGCAACACTTCAACTCCATCCTCGAACCGCCGTCCTACGCCGACGCGATCTTCACCTCGTTCGATTCCTCCGCCTCCGCATCCAACGGCCACGACAGTCCCAGGCCCGAATCGGACCCTCCGGCCCGGTCCGAGTTCCTCAAGGTATGGGTCTCCGACCCGCAGAAGGAGCTCGAGCTCTCGAACTCGCTCGTCCCGGGGGGGACGTCGTACTACACCTACTTGATCACAACGCGGACCAATATGCCGGAGTACGGCGGGGACGGATCGGAGTTCACGGTGCGGCGGCGGTTCAAGGACGTGGTGACGTTATCGGACCGGTTGTCGGAGTCGTACCGCGGGTTCTTCATCCCAATCCGACCCGATAAGAGCGTGGTGGAGAGCCAGGTGATGCAAATCGAGCAGTTCGTCGAGCAGAGAAGGGCGGCGTTGAGTAAGTACCTGAACAAGCTCGCGGCGCACCCGGCGATCAGGAGGAGCGAGGAATTGAGAGTGTTTTTGGTTGTGAAAGGGAAGCTGCCGTTGATGAGGAGTGTGGATGTGGCGTCGAGGATGTTGGATGGGGCGGTGAGGCTGCCGAGGCAGTTGGTTGGTGAGGCGGTGGATGCGAACGAGGCGGCGCAGCCGGCCAAGGGCGGGAGAGACTTGATGAGGATCTTCAGAGAGTTGAAGCAGTCTGTGGTGAATGACTGGGGAGGTGTGAAGCCAATGGTGGCGGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAAGGTGGTGGAGTTTGAGCAACAGCTTAGCAATATGTCACAGCAGGCTGAGTTGCTAGTAAAAGCTCAGCAAGATATGGGAGAGACTATGGGGGAATTGGGTTTGGCGTTTGTGAAGCTGACCAAGCTTGAGACGGAAGGAGCCATGTTCGAATCTCAAACAACACGAGCCACTGACATGAAAAATGTGGCTACAGCAGCTGTTAAATCTAGCCGATTGTACCGGGAGTTAAATGCACAAACTGTTAAACATTTGGACAAACTCCATGAATATCTTGGAGTAATGTTAGCAGTCAACGGTGCGTTTTCAGACCGAACAAGCGCTTTACTAACGGTGCAAACTCTTTCATCAGACTTGGTTTCCCTGCAGTCAAGGATTGAGAAGCTTGAAGCTGCAGCATCCAAAATATTTGGTGGAGACAGGTCCAGGATGCGGAAAATAGAGGAGTTAAAAGAAACTTTAAAAGTTAGTGAGGAAGCCAAAGCTTGTGCAGTTAAAGAGTATGAATGCATCAAGGAAAATAACAGGAATGAACTTGAAAGGCTTGATAGAGAGAGACATGACGATTTTATGGGAATGTTGAAAGGATTTGTTCTTAATCAGGTTATGCAGAAAAGATGGCAAATGCATGGGAGAAGCTTGCGGAAGAAACCAGTGGGTACGCAAAAGATGGCAGCTGACACTTCTGCTGGAAATTTTTGTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf

Protein Analysis

544

Amino Acids

60.79

Weight (kDa)

5.95

Isoelectric Point (pI)

49.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	146 - 227	1.2e-16	PX domain
Vps5	PF09325	294 - 513	2.9e-17	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52200 AT5G52200 AT5G52200
fragaria_vesca	FvH4_7g29250 FvH4_7g29250 FvH4_7g29250
malus_domestica	MD01G1199100.v1.1 MD07G1266900.v1.1
prunus_persica	Prupe.2G292500_v2.0.a1 Prupe.2G292500_v2.0.a1 Prupe.2G292500_v2.0.a1
pyrus_communis	pycom01g20900
rosa_chinensis	RchiOBHm_Chr1g0377001
rosa_laevigata	RLG00000026552
rosa_multiflora	Rmu_ssc0000155.1_g000030
rosa_roxburghii	Rroxscaffold_4G00281560
rosa_rugosa	Rorug01G0400500 Rorug01G0400600
rosa_samantha	Rh1AG417500 Rh1BG376900 Rh1CG390700 Rh1DG407700
rosa_wichuraiana	Rw1G036650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	386
AccII	CGCG	5 cut(s)	45, 224, 412, 516, 632
AclWI	GGATC	2 cut(s)	451, 839
AcoI	YGGCCR	3 cut(s)	103, 265, 804
AcsI	RAATTY	2 cut(s)	30, 1621
AcuI	CTGAAG	1 cut(s)	820
AcyI	GRCGYC	2 cut(s)	383, 722
AfaI	GTAC	6 cut(s)	389, 431, 512, 617, 1148, 1588
AfeI	AGCGCT	1 cut(s)	1249
AfiI	CCNNNNNNNGG	6 cut(s)	343, 431, 502, 809, 813, 1359
AgeI	ACCGGT	1 cut(s)	495
AgsI	TTSAA	6 cut(s)	190, 472, 847, 1316, 1466, 1510
AhdI	GACNNNNNGTC	1 cut(s)	499
AjiI	CACGTC	1 cut(s)	478
AjnI	CCWGG	3 cut(s)	278, 561, 1352
AloI	GAACNNNNNNTCC	2 cut(s)	893, 925
Alw21I	GWGCWC	2 cut(s)	351, 357
Alw26I	GTCTC	6 cut(s)	334, 813, 1004, 1052, 1338, 1477
AlwI	GGATC	2 cut(s)	451, 839
AlwNI	CAGNNNCTG	1 cut(s)	1127
Ama87I	CYCGRG	2 cut(s)	350, 373
Aor51HI	AGCGCT	1 cut(s)	1249
AoxI	GGCC	5 cut(s)	103, 265, 281, 300, 804
ApeKI	GCWGC	7 cut(s)	694, 751, 799, 1124, 1319, 1322, 1601
ApoI	RAATTY	2 cut(s)	30, 1621
AsiGI	ACCGGT	1 cut(s)	495
AspLEI	GCGC	3 cut(s)	637, 799, 1250
AspS9I	GGNCC	8 cut(s)	73, 282, 292, 301, 306, 414, 493, 1350
AsuC2I	CCSGG	5 cut(s)	304, 374, 375, 641, 1151
AsuHPI	GGTGA	6 cut(s)	223, 493, 577, 757, 782, 871
AsuII	TTCGAA	1 cut(s)	1077
AvaI	CYCGRG	2 cut(s)	350, 373
AvaII	GGWCC	6 cut(s)	73, 292, 306, 414, 493, 1350
BanII	GRGCYC	2 cut(s)	351, 357
BauI	CACGAG	1 cut(s)	1092
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	2 cut(s)	351, 357
BbvI	GCAGC	7 cut(s)	681, 738, 811, 1136, 1306, 1334, 1613
BccI	CCATC	6 cut(s)	55, 154, 203, 731, 1539, 1591
BceAI	ACGGC	6 cut(s)	118, 137, 193, 280, 448, 682
BciT130I	CCWGG	3 cut(s)	280, 563, 1354
BclI	TGATCA	1 cut(s)	402
BcnI	CCSGG	5 cut(s)	304, 374, 375, 641, 1151
BcoDI	GTCTC	6 cut(s)	334, 813, 1004, 1052, 1338, 1477
BfaI	CTAG	2 cut(s)	983, 1137
BfmI	CTRYAG	3 cut(s)	1119, 1292, 1320
BfoI	RGCGCY	1 cut(s)	1251
BlpI	GCTNAGC	2 cut(s)	953, 993
Bme1390I	CCNGG	8 cut(s)	280, 304, 374, 375, 563, 641, 1151, 1354
Bme18I	GGWCC	6 cut(s)	73, 292, 306, 414, 493, 1350
BmeRI	GACNNNNNGTC	1 cut(s)	499
BmeT110I	CYCGRG	2 cut(s)	350, 373
BmgBI	CACGTC	1 cut(s)	478
BmgT120I	GGNCC	8 cut(s)	73, 282, 292, 301, 306, 414, 493, 1350
BmiI	GGNNCC	2 cut(s)	294, 1069
BmrFI	CCNGG	8 cut(s)	280, 304, 374, 375, 563, 641, 1151, 1354
BmrI	ACTGGG	1 cut(s)	877
BmsI	GCATC	6 cut(s)	266, 558, 772, 1334, 1347, 1446
BmuI	ACTGGG	1 cut(s)	877
BpiI	GAAGAC	1 cut(s)	102
Bpu1102I	GCTNAGC	2 cut(s)	953, 993
Bpu14I	TTCGAA	1 cut(s)	1077
BpuEI	CTTGAG	2 cut(s)	302, 1076
BpuMI	CCSGG	5 cut(s)	304, 374, 375, 641, 1151
BsaBI	GATNNNNATC	2 cut(s)	572, 830
BsaHI	GRCGYC	2 cut(s)	383, 722
BsaI	GGTCTC	1 cut(s)	334
BsaJI	CCNNGG	7 cut(s)	19, 278, 373, 374, 514, 755, 807
BsaWI	WCCGGW	1 cut(s)	495
BsaXI	ACNNNNNCTCC	2 cut(s)	176, 206
Bsc4I	CCNNNNNNNGG	6 cut(s)	343, 431, 502, 809, 813, 1359
Bse118I	RCCGGY	2 cut(s)	495, 802
Bse1I	ACTGG	3 cut(s)	106, 872, 1580
Bse8I	GATNNNNATC	2 cut(s)	572, 830
BseBI	CCWGG	3 cut(s)	280, 563, 1354
BseDI	CCNNGG	7 cut(s)	19, 278, 373, 374, 514, 755, 807
BseJI	GATNNNNATC	2 cut(s)	572, 830
BseLI	CCNNNNNNNGG	6 cut(s)	343, 431, 502, 809, 813, 1359
BseMII	CTCAG	2 cut(s)	966, 1007
BseNI	ACTGG	3 cut(s)	106, 872, 1580
BseRI	GAGGAG	6 cut(s)	109, 112, 667, 721, 911, 1385
BseXI	GCAGC	7 cut(s)	681, 738, 811, 1136, 1306, 1334, 1613
BsgI	GTGCAG	1 cut(s)	1437
Bsh1236I	CGCG	5 cut(s)	45, 224, 412, 516, 632
BshFI	GGCC	5 cut(s)	105, 267, 283, 302, 806
BshTI	ACCGGT	1 cut(s)	495
BsiHKAI	GWGCWC	2 cut(s)	351, 357
BsiHKCI	CYCGRG	2 cut(s)	350, 373
BsiSI	CCGG	8 cut(s)	299, 304, 374, 425, 496, 641, 803, 1150
BslFI	GGGAC	4 cut(s)	261, 356, 394, 452
BslI	CCNNNNNNNGG	6 cut(s)	343, 431, 502, 809, 813, 1359
BsmAI	GTCTC	6 cut(s)	334, 813, 1004, 1052, 1338, 1477
BsmBI	CGTCTC	1 cut(s)	1052
BsmFI	GGGAC	4 cut(s)	261, 356, 394, 452
BsmI	GAATGC	1 cut(s)	1439
BsnI	GGCC	5 cut(s)	105, 267, 283, 302, 806
Bso31I	GGTCTC	1 cut(s)	334
BsoBI	CYCGRG	2 cut(s)	350, 373
Bsp119I	TTCGAA	1 cut(s)	1077
Bsp1286I	GDGCHC	2 cut(s)	351, 357
Bsp143I	GATC	5 cut(s)	225, 402, 443, 645, 831
Bsp1720I	GCTNAGC	2 cut(s)	953, 993
Bsp19I	CCATGG	1 cut(s)	19
BspANI	GGCC	5 cut(s)	105, 267, 283, 302, 806
BspCNI	CTCAG	2 cut(s)	967, 1006
BspFNI	CGCG	5 cut(s)	45, 224, 412, 516, 632
BspLI	GGNNCC	2 cut(s)	294, 1069
BspMAI	CTGCAG	2 cut(s)	1296, 1324
BspPI	GGATC	2 cut(s)	451, 839
BspT104I	TTCGAA	1 cut(s)	1077
BspTNI	GGTCTC	1 cut(s)	334
BsrFI	RCCGGY	2 cut(s)	495, 802
BsrI	ACTGG	3 cut(s)	106, 872, 1580
BssAI	RCCGGY	2 cut(s)	495, 802
BssECI	CCNNGG	7 cut(s)	19, 278, 373, 374, 514, 755, 807
BssMI	GATC	5 cut(s)	225, 402, 443, 645, 831
BssNI	GRCGYC	2 cut(s)	383, 722
BssSI	CACGAG	1 cut(s)	1092
BssT1I	CCWWGG	2 cut(s)	19, 807
Bst2BI	CACGAG	1 cut(s)	1092
Bst2UI	CCWGG	3 cut(s)	280, 563, 1354
Bst4CI	ACNGT	5 cut(s)	275, 457, 1171, 1226, 1261
BstACI	GRCGYC	2 cut(s)	383, 722
BstBI	TTCGAA	1 cut(s)	1077
BstC8I	GCNNGC	4 cut(s)	630, 804, 972, 1568
BstDEI	CTNAG	3 cut(s)	953, 975, 993
BstDSI	CCRYGG	2 cut(s)	19, 514
BstFNI	CGCG	5 cut(s)	45, 224, 412, 516, 632
BstH2I	RGCGCY	1 cut(s)	1251
BstHHI	GCGC	3 cut(s)	637, 799, 1250
BstKTI	GATC	5 cut(s)	228, 405, 446, 648, 834
BstMAI	GTCTC	6 cut(s)	334, 813, 1004, 1052, 1338, 1477
BstMBI	GATC	5 cut(s)	225, 402, 443, 645, 831
BstNI	CCWGG	3 cut(s)	280, 563, 1354
BstSCI	CCNGG	8 cut(s)	278, 302, 372, 373, 561, 639, 1149, 1352
BstSFI	CTRYAG	3 cut(s)	1119, 1292, 1320
BstUI	CGCG	5 cut(s)	45, 224, 412, 516, 632
BstV1I	GCAGC	7 cut(s)	681, 738, 811, 1136, 1306, 1334, 1613
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	831
BstYI	RGATCY	1 cut(s)	831
BsuRI	GGCC	5 cut(s)	105, 267, 283, 302, 806
BtgI	CCRYGG	2 cut(s)	19, 514
BtrI	CACGTC	1 cut(s)	478
BtsIMutI	CAGTG	2 cut(s)	1098, 1587
Cac8I	GCNNGC	4 cut(s)	630, 804, 972, 1568
CaiI	CAGNNNCTG	1 cut(s)	1127
CfoI	GCGC	3 cut(s)	637, 799, 1250
Cfr10I	RCCGGY	2 cut(s)	495, 802
Cfr13I	GGNCC	8 cut(s)	73, 282, 292, 301, 306, 414, 493, 1350
Cfr42I	CCGCGG	1 cut(s)	517
Cfr9I	CCCGGG	1 cut(s)	373
CpoI	CGGWCCG	2 cut(s)	306, 493
CseI	GACGC	2 cut(s)	230, 711
Csp6I	GTAC	6 cut(s)	388, 430, 511, 616, 1147, 1587
CspAI	ACCGGT	1 cut(s)	495
CspI	CGGWCCG	2 cut(s)	306, 493
CviAII	CATG	6 cut(s)	20, 1072, 1105, 1193, 1487, 1556
CviQI	GTAC	6 cut(s)	388, 430, 511, 616, 1147, 1587
DdeI	CTNAG	3 cut(s)	953, 975, 993
DpnI	GATC	5 cut(s)	227, 404, 445, 647, 833
DpnII	GATC	5 cut(s)	225, 402, 443, 645, 831
DraI	TTTAAA	1 cut(s)	1389
DriI	GACNNNNNGTC	1 cut(s)	499
EaeI	YGGCCR	3 cut(s)	103, 265, 804
Eam1105I	GACNNNNNGTC	1 cut(s)	499
EciI	GGCGGA	3 cut(s)	115, 238, 908
Ecl136II	GAGCTC	2 cut(s)	349, 355
Eco130I	CCWWGG	2 cut(s)	19, 807
Eco24I	GRGCYC	2 cut(s)	351, 357
Eco31I	GGTCTC	1 cut(s)	334
Eco47I	GGWCC	6 cut(s)	73, 292, 306, 414, 493, 1350
Eco47III	AGCGCT	1 cut(s)	1249
Eco53kI	GAGCTC	2 cut(s)	349, 355
Eco57I	CTGAAG	1 cut(s)	820
Eco88I	CYCGRG	2 cut(s)	350, 373
EcoICRI	GAGCTC	2 cut(s)	349, 355
EcoRII	CCWGG	3 cut(s)	278, 561, 1352
EcoT14I	CCWWGG	2 cut(s)	19, 807
EcoT22I	ATGCAT	2 cut(s)	1439, 1557
EcoT38I	GRGCYC	2 cut(s)	351, 357
ErhI	CCWWGG	2 cut(s)	19, 807
Esp3I	CGTCTC	1 cut(s)	1052
FaeI	CATG	6 cut(s)	23, 1075, 1108, 1196, 1490, 1559
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	4 cut(s)	261, 356, 394, 452
FatI	CATG	6 cut(s)	19, 1071, 1104, 1192, 1486, 1555
FauI	CCCGC	4 cut(s)	345, 428, 509, 806
FbaI	TGATCA	1 cut(s)	402
FriOI	GRGCYC	2 cut(s)	351, 357
FspBI	CTAG	2 cut(s)	983, 1137
GlaI	GCGC	3 cut(s)	636, 798, 1249
HaeII	RGCGCY	1 cut(s)	1251
HaeIII	GGCC	5 cut(s)	105, 267, 283, 302, 806
HapII	CCGG	8 cut(s)	299, 304, 374, 425, 496, 641, 803, 1150
HgaI	GACGC	2 cut(s)	230, 711
HhaI	GCGC	3 cut(s)	637, 799, 1250
Hin1I	GRCGYC	2 cut(s)	383, 722
Hin1II	CATG	6 cut(s)	23, 1075, 1108, 1196, 1490, 1559
Hin6I	GCGC	3 cut(s)	635, 797, 1248
HinP1I	GCGC	3 cut(s)	635, 797, 1248
HincII	GTYRAC	1 cut(s)	1222
HindII	GTYRAC	1 cut(s)	1222
HindIII	AAGCTT	4 cut(s)	1052, 1310, 1410, 1564
HinfI	GANTC	6 cut(s)	47, 65, 242, 287, 506, 1079
HpaII	CCGG	8 cut(s)	299, 304, 374, 425, 496, 641, 803, 1150
HphI	GGTGA	6 cut(s)	223, 493, 577, 757, 782, 871
Hpy166II	GTNNAC	2 cut(s)	453, 1222
Hpy188III	TCNNGA	2 cut(s)	358, 649
Hpy8I	GTNNAC	2 cut(s)	453, 1222
Hpy99I	CGWCG	6 cut(s)	29, 83, 224, 388, 590, 727
HpyAV	CCTTC	6 cut(s)	99, 337, 591, 916, 922, 1058
HpyCH4III	ACNGT	5 cut(s)	275, 457, 1171, 1226, 1261
HpyCH4IV	ACGT	3 cut(s)	383, 477, 485
HpyCH4V	TGCA	9 cut(s)	571, 1163, 1264, 1294, 1322, 1418, 1437, 1537, 1555
HpyF3I	CTNAG	3 cut(s)	953, 975, 993
HpySE526I	ACGT	3 cut(s)	383, 477, 485
Hsp92I	GRCGYC	2 cut(s)	383, 722
Hsp92II	CATG	6 cut(s)	23, 1075, 1108, 1196, 1490, 1559
HspAI	GCGC	3 cut(s)	635, 797, 1248
KroI	GCCGGC	1 cut(s)	802
KroNI	GCCGGC	1 cut(s)	804
Ksp22I	TGATCA	1 cut(s)	402
KspI	CCGCGG	1 cut(s)	517
Kzo9I	GATC	5 cut(s)	225, 402, 443, 645, 831
LmnI	GCTCC	3 cut(s)	346, 654, 1067
Lsp1109I	GCAGC	7 cut(s)	681, 738, 811, 1136, 1306, 1334, 1613
LweI	GCATC	6 cut(s)	266, 558, 772, 1334, 1347, 1446
MaeI	CTAG	2 cut(s)	983, 1137
MaeII	ACGT	3 cut(s)	383, 477, 485
MaeIII	GTNAC	2 cut(s)	481, 963
MalI	GATC	5 cut(s)	227, 404, 445, 647, 833
MboI	GATC	5 cut(s)	225, 402, 443, 645, 831
MboII	GAAGA	6 cut(s)	102, 220, 514, 826, 931, 1585
MflI	RGATCY	1 cut(s)	831
MhlI	GDGCHC	2 cut(s)	351, 357
MluCI	AATT	4 cut(s)	30, 662, 1022, 1621
MlyI	GAGTC	1 cut(s)	515
MmeI	TCCRAC	7 cut(s)	60, 123, 285, 357, 483, 559, 714
Mph1103I	ATGCAT	2 cut(s)	1439, 1557
MroNI	GCCGGC	1 cut(s)	802
MseI	TTAA	7 cut(s)	1131, 1157, 1173, 1376, 1388, 1422, 1524
MslI	CAYNNNNRTG	1 cut(s)	1103
MspA1I	CMGCKG	3 cut(s)	516, 1127, 1604
MspI	CCGG	8 cut(s)	299, 304, 374, 425, 496, 641, 803, 1150
MspR9I	CCNGG	8 cut(s)	280, 304, 374, 375, 563, 641, 1151, 1354
Mva1269I	GAATGC	1 cut(s)	1439
MvaI	CCWGG	3 cut(s)	280, 563, 1354
MvnI	CGCG	5 cut(s)	45, 224, 412, 516, 632
NaeI	GCCGGC	1 cut(s)	804
NciI	CCSGG	5 cut(s)	304, 374, 375, 641, 1151
NcoI	CCATGG	1 cut(s)	19
NdeII	GATC	5 cut(s)	225, 402, 443, 645, 831
NgoMIV	GCCGGC	1 cut(s)	802
NlaIII	CATG	6 cut(s)	23, 1075, 1108, 1196, 1490, 1559
NlaIV	GGNNCC	2 cut(s)	294, 1069
NmeAIII	GCCGAG	1 cut(s)	780
NmuCI	GTSAC	2 cut(s)	481, 963
NsiI	ATGCAT	2 cut(s)	1439, 1557
NspV	TTCGAA	1 cut(s)	1077
PaeR7I	CTCGAG	1 cut(s)	350
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 582
PctI	GAATGC	1 cut(s)	1439
PdiI	GCCGGC	1 cut(s)	804
PfeI	GAWTC	5 cut(s)	47, 65, 242, 287, 1079
PfoI	TCCNGGA	1 cut(s)	1352
PinAI	ACCGGT	1 cut(s)	495
PleI	GAGTC	1 cut(s)	514
PpsI	GAGTC	1 cut(s)	514
Psp124BI	GAGCTC	2 cut(s)	351, 357
Psp6I	CCWGG	3 cut(s)	278, 561, 1352
PspGI	CCWGG	3 cut(s)	278, 561, 1352
PspN4I	GGNNCC	2 cut(s)	294, 1069
PspPI	GGNCC	8 cut(s)	73, 282, 292, 301, 306, 414, 493, 1350
PspXI	VCTCGAGB	1 cut(s)	350
PsrI	GAACNNNNNNTAC	2 cut(s)	503, 535
PstI	CTGCAG	2 cut(s)	1296, 1324
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	1 cut(s)	831
PvuII	CAGCTG	2 cut(s)	1127, 1604
RsaI	GTAC	6 cut(s)	389, 431, 512, 617, 1148, 1588
RsaNI	GTAC	6 cut(s)	388, 430, 511, 616, 1147, 1587
RseI	CAYNNNNRTG	1 cut(s)	1103
Rsr2I	CGGWCCG	2 cut(s)	306, 493
RsrII	CGGWCCG	2 cut(s)	306, 493
SacI	GAGCTC	2 cut(s)	351, 357
SacII	CCGCGG	1 cut(s)	517
SaqAI	TTAA	7 cut(s)	1131, 1157, 1173, 1376, 1388, 1422, 1524
Sau3AI	GATC	5 cut(s)	225, 402, 443, 645, 831
Sau96I	GGNCC	8 cut(s)	73, 282, 292, 301, 306, 414, 493, 1350
SchI	GAGTC	1 cut(s)	515
ScrFI	CCNGG	8 cut(s)	280, 304, 374, 375, 563, 641, 1151, 1354
SduI	GDGCHC	2 cut(s)	351, 357
SfaNI	GCATC	6 cut(s)	266, 558, 772, 1334, 1347, 1446
SfcI	CTRYAG	3 cut(s)	1119, 1292, 1320
Sfr274I	CTCGAG	1 cut(s)	350
Sfr303I	CCGCGG	1 cut(s)	517
SfuI	TTCGAA	1 cut(s)	1077
SgrBI	CCGCGG	1 cut(s)	517
SinI	GGWCC	6 cut(s)	73, 292, 306, 414, 493, 1350
SlaI	CTCGAG	1 cut(s)	350
SmaI	CCCGGG	1 cut(s)	375
SmiMI	CAYNNNNRTG	1 cut(s)	1103
SmlI	CTYRAG	3 cut(s)	317, 350, 1055
SmoI	CTYRAG	3 cut(s)	317, 350, 1055
Sse9I	AATT	4 cut(s)	30, 662, 1022, 1621
SspI	AATATT	1 cut(s)	1335
SspMI	CTAG	2 cut(s)	983, 1137
SstI	GAGCTC	2 cut(s)	351, 357
StyD4I	CCNGG	8 cut(s)	278, 302, 372, 373, 561, 639, 1149, 1352
StyI	CCWWGG	2 cut(s)	19, 807
TaaI	ACNGT	5 cut(s)	275, 457, 1171, 1226, 1261
TaiI	ACGT	3 cut(s)	386, 480, 488
TaqI	TCGA	9 cut(s)	78, 201, 240, 351, 359, 576, 588, 725, 1077
TaqII	GACCGA	1 cut(s)	1254
TasI	AATT	4 cut(s)	30, 662, 1022, 1621
TauI	GCSGC	9 cut(s)	131, 134, 137, 140, 463, 466, 605, 635, 797
TfiI	GAWTC	5 cut(s)	47, 65, 242, 287, 1079
Tru1I	TTAA	7 cut(s)	1131, 1157, 1173, 1376, 1388, 1422, 1524
Tru9I	TTAA	7 cut(s)	1131, 1157, 1173, 1376, 1388, 1422, 1524
TscAI	CASTG	2 cut(s)	1105, 1587
TseFI	GTSAC	2 cut(s)	481, 963
TseI	GCWGC	7 cut(s)	694, 751, 799, 1124, 1319, 1322, 1601
Tsp45I	GTSAC	2 cut(s)	481, 963
TspDTI	ATGAA	7 cut(s)	81, 514, 1121, 1209, 1263, 1446, 1473
TspGWI	ACGGA	2 cut(s)	456, 1076
TspMI	CCCGGG	1 cut(s)	373
TspRI	CASTG	2 cut(s)	1105, 1587
VpaK11BI	GGWCC	6 cut(s)	73, 292, 306, 414, 493, 1350
XapI	RAATTY	2 cut(s)	30, 1621
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1199
XhoI	CTCGAG	1 cut(s)	350
XmaI	CCCGGG	1 cut(s)	373
XspI	CTAG	2 cut(s)	983, 1137
ZraI	GACGTC	1 cut(s)	384
Zsp2I	ATGCAT	2 cut(s)	1439, 1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.