Prupe.2G296400_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0014824
Physical Location & Seq
Forward (+)
28711204 .. 28712093
890 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G296400.1

Sequence Viewer

Length: 585 bp
ATGGCCAACATAGTCAAGTACCCACAAGTTCAAAACAAGCTCTTTGCAGAGATCAAAGGGGTTGTGGCAGAAACAGAGGAGGAGGTGGAGGAGGAGGTGCTGCACAAGTTGCCATATCTGAAAGCTGTGATCTTGGAGGGACTGAGGCGCCATCCGCCGGGGCACTTTCTGCTGCCGCACGCTGTAACCCAGGACGTGGTTTTGGGCGGGCGTTTGGTGCCCAAGAATGGCATTGTGAATTTCATGGTGGCTGATTTGGGGTGGGACCCAGAGGTGTGGGAGGACCCCATGGCATTCAAGCCGGAGAGGTTCTTGAGTGGTGGTGGTAAATGTGGAGGAGTAGAAGAAGCGTTCGATTTAACAGGGAGCAGAGAGATTAAGATGATGCCGTTTGGGGTGGGGAGGAGAATTTGCCCTGCCTCTGGTTTGGCAATGCTTCATCTCCAGTATTTCGTGGCGAATTTGGTTTGGAAATTTGAGTGGAGAGCCGTGGATGGAGATGACGTTGACCTTTCAGAGAAGCCATTGGTCACTGTGGTCATGAAGAATCCATTGCAGGCCCACTTGTCCTCAAGAGTGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00830 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map01100 map04913 map04917 map04927 map04934 map05204
Pfam Domains
Protein Families
p450

Protein Analysis

195

Amino Acids

21.67

Weight (kDa)

5.88

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 147, 217
AccB7I CCANNNNNTGG 1 cut(s) 196
AciI CCGC 3 cut(s) 155, 176, 207
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 238, 408, 460, 473
AcyI GRCGYC 1 cut(s) 148
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 4 cut(s) 157, 196, 227, 422
AgsI TTSAA 2 cut(s) 32, 298
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 1 cut(s) 189
AluBI AGCT 2 cut(s) 40, 125
AluI AGCT 2 cut(s) 40, 125
AoxI GGCC 2 cut(s) 3, 558
ApeKI GCWGC 2 cut(s) 100, 172
ApoI RAATTY 4 cut(s) 238, 408, 460, 473
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 3 cut(s) 265, 283, 559
AsuC2I CCSGG 1 cut(s) 159
AvaII GGWCC 2 cut(s) 265, 283
BaeGI GKGCMC 2 cut(s) 165, 222
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 147, 217
BbvI GCAGC 2 cut(s) 87, 159
BccI CCATC 2 cut(s) 159, 488
BceAI ACGGC 2 cut(s) 373, 473
BciT130I CCWGG 1 cut(s) 191
BcnI CCSGG 1 cut(s) 159
BfoI RGCGCY 1 cut(s) 151
BisI GCNGC 3 cut(s) 101, 173, 176
BlsI GCNGC 3 cut(s) 102, 174, 177
Bme1390I CCNGG 2 cut(s) 159, 191
Bme18I GGWCC 2 cut(s) 265, 283
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 3 cut(s) 265, 283, 559
BmiI GGNNCC 5 cut(s) 149, 219, 266, 267, 285
BmrFI CCNGG 2 cut(s) 159, 191
BmsI GCATC 1 cut(s) 375
BpmI CTGGAG 1 cut(s) 428
BpuEI CTTGAG 2 cut(s) 334, 556
BpuMI CCSGG 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 148
BsaJI CCNNGG 4 cut(s) 158, 189, 288, 489
BsaXI ACNNNNNCTCC 2 cut(s) 489, 519
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 196, 227, 422
Bse1I ACTGG 1 cut(s) 445
Bse3DI GCAATG 2 cut(s) 438, 551
BseBI CCWGG 1 cut(s) 191
BseDI CCNNGG 4 cut(s) 158, 189, 288, 489
BseGI GGATG 2 cut(s) 151, 499
BseLI CCNNNNNNNGG 4 cut(s) 157, 196, 227, 422
BseMI GCAATG 2 cut(s) 438, 551
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 445
BseRI GAGGAG 6 cut(s) 92, 95, 104, 107, 351, 418
BseSI GKGCMC 2 cut(s) 165, 222
BseXI GCAGC 2 cut(s) 87, 159
BsgI GTGCAG 1 cut(s) 86
BshFI GGCC 2 cut(s) 5, 560
BshNI GGYRCC 2 cut(s) 147, 217
BsiSI CCGG 2 cut(s) 158, 302
BslFI GGGAC 2 cut(s) 153, 278
BslI CCNNNNNNNGG 4 cut(s) 157, 196, 227, 422
BsmFI GGGAC 2 cut(s) 153, 278
BsmI GAATGC 1 cut(s) 293
BsnI GGCC 2 cut(s) 5, 560
Bsp1286I GDGCHC 2 cut(s) 165, 222
Bsp143I GATC 2 cut(s) 51, 129
Bsp19I CCATGG 1 cut(s) 288
BspACI CCGC 3 cut(s) 155, 176, 207
BspANI GGCC 2 cut(s) 5, 560
BspCNI CTCAG 1 cut(s) 135
BspHI TCATGA 1 cut(s) 540
BspLI GGNNCC 5 cut(s) 149, 219, 266, 267, 285
BspT107I GGYRCC 2 cut(s) 147, 217
BsrDI GCAATG 2 cut(s) 438, 551
BsrI ACTGG 1 cut(s) 445
BssECI CCNNGG 4 cut(s) 158, 189, 288, 489
BssMI GATC 2 cut(s) 51, 129
BssNI GRCGYC 1 cut(s) 148
BssT1I CCWWGG 1 cut(s) 288
Bst2UI CCWGG 1 cut(s) 191
Bst4CI ACNGT 1 cut(s) 535
BstACI GRCGYC 1 cut(s) 148
BstAPI GCANNNNNTGC 2 cut(s) 109, 169
BstC8I GCNNGC 3 cut(s) 180, 209, 558
BstDEI CTNAG 1 cut(s) 143
BstDSI CCRYGG 2 cut(s) 288, 489
BstF5I GGATG 2 cut(s) 151, 499
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 2 cut(s) 54, 132
BstMBI GATC 2 cut(s) 51, 129
BstMWI GCNNNNNNNGC 4 cut(s) 109, 154, 169, 217
BstNI CCWGG 1 cut(s) 191
BstSCI CCNGG 2 cut(s) 157, 189
BstSLI GKGCMC 2 cut(s) 165, 222
BstV1I GCAGC 2 cut(s) 87, 159
BstXI CCANNNNNNTGG 1 cut(s) 276
BsuRI GGCC 2 cut(s) 5, 560
BtgI CCRYGG 2 cut(s) 288, 489
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 2 cut(s) 151, 499
BtsIMutI CAGTG 1 cut(s) 531
Cac8I GCNNGC 3 cut(s) 180, 209, 558
CciI TCATGA 1 cut(s) 540
CfoI GCGC 1 cut(s) 150
Cfr13I GGNCC 3 cut(s) 265, 283, 559
Csp6I GTAC 1 cut(s) 19
CviAII CATG 3 cut(s) 244, 289, 541
CviJI RGCY 8 cut(s) 5, 40, 125, 251, 301, 488, 523, 560
CviKI_1 RGCY 8 cut(s) 5, 40, 125, 251, 301, 488, 523, 560
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 1 cut(s) 143
DinI GGCGCC 1 cut(s) 149
DpnI GATC 2 cut(s) 53, 131
DpnII GATC 2 cut(s) 51, 129
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 288
Eco47I GGWCC 2 cut(s) 265, 283
EcoO109I RGGNCCY 2 cut(s) 265, 283
EcoRII CCWGG 1 cut(s) 189
EcoT14I CCWWGG 1 cut(s) 288
EgeI GGCGCC 1 cut(s) 149
EheI GGCGCC 1 cut(s) 149
ErhI CCWWGG 1 cut(s) 288
FaeI CATG 3 cut(s) 247, 292, 544
FaiI YATR 5 cut(s) 11, 115, 245, 290, 542
FaqI GGGAC 2 cut(s) 153, 278
FatI CATG 3 cut(s) 243, 288, 540
FauI CCCGC 1 cut(s) 200
Fnu4HI GCNGC 3 cut(s) 101, 173, 176
FokI GGATG 2 cut(s) 138, 506
Fsp4HI GCNGC 3 cut(s) 101, 173, 176
GlaI GCGC 1 cut(s) 149
GluI GCNGC 3 cut(s) 101, 173, 176
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 2 cut(s) 5, 560
HapII CCGG 2 cut(s) 158, 302
HhaI GCGC 1 cut(s) 150
Hin1I GRCGYC 1 cut(s) 148
Hin1II CATG 3 cut(s) 247, 292, 544
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HinfI GANTC 1 cut(s) 547
HpaII CCGG 2 cut(s) 158, 302
Hpy166II GTNNAC 1 cut(s) 508
Hpy188I TCNGA 2 cut(s) 120, 517
Hpy188III TCNNGA 3 cut(s) 313, 541, 573
Hpy8I GTNNAC 1 cut(s) 508
HpyCH4III ACNGT 1 cut(s) 535
HpyCH4IV ACGT 2 cut(s) 195, 504
HpyCH4V TGCA 3 cut(s) 47, 103, 556
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 154, 169, 217
HpyF3I CTNAG 1 cut(s) 143
HpySE526I ACGT 2 cut(s) 195, 504
Hsp92I GRCGYC 1 cut(s) 148
Hsp92II CATG 3 cut(s) 247, 292, 544
HspAI GCGC 1 cut(s) 148
KasI GGCGCC 1 cut(s) 147
KflI GGGWCCC 1 cut(s) 265
Kzo9I GATC 2 cut(s) 51, 129
LmnI GCTCC 1 cut(s) 366
Lsp1109I GCAGC 2 cut(s) 87, 159
LweI GCATC 1 cut(s) 375
MaeII ACGT 2 cut(s) 195, 504
MaeIII GTNAC 2 cut(s) 184, 529
MalI GATC 2 cut(s) 53, 131
MboI GATC 2 cut(s) 51, 129
MboII GAAGA 2 cut(s) 356, 556
MhlI GDGCHC 2 cut(s) 165, 222
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 238, 408, 460, 473
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 148
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 359, 378
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 158, 302
MspR9I CCNGG 2 cut(s) 159, 191
Mva1269I GAATGC 1 cut(s) 293
MvaI CCWGG 1 cut(s) 191
MwoI GCNNNNNNNGC 4 cut(s) 109, 154, 169, 217
NarI GGCGCC 1 cut(s) 148
NciI CCSGG 1 cut(s) 159
NcoI CCATGG 1 cut(s) 288
NdeII GATC 2 cut(s) 51, 129
NlaIII CATG 3 cut(s) 247, 292, 544
NlaIV GGNNCC 5 cut(s) 149, 219, 266, 267, 285
NmuCI GTSAC 1 cut(s) 529
PagI TCATGA 1 cut(s) 540
PctI GAATGC 1 cut(s) 293
PfeI GAWTC 1 cut(s) 547
PflMI CCANNNNNTGG 1 cut(s) 196
PkrI GCNGC 3 cut(s) 102, 174, 177
PluTI GGCGCC 1 cut(s) 151
PpuMI RGGWCCY 2 cut(s) 265, 283
Psp5II RGGWCCY 2 cut(s) 265, 283
Psp6I CCWGG 1 cut(s) 189
PspGI CCWGG 1 cut(s) 189
PspN4I GGNNCC 5 cut(s) 149, 219, 266, 267, 285
PspPI GGNCC 3 cut(s) 265, 283, 559
PspPPI RGGWCCY 2 cut(s) 265, 283
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
SaqAI TTAA 2 cut(s) 359, 378
SatI GCNGC 3 cut(s) 101, 173, 176
Sau3AI GATC 2 cut(s) 51, 129
Sau96I GGNCC 3 cut(s) 265, 283, 559
ScrFI CCNGG 2 cut(s) 159, 191
SduI GDGCHC 2 cut(s) 165, 222
SetI ASST 9 cut(s) 42, 87, 99, 127, 198, 276, 311, 507, 513
SfaNI GCATC 1 cut(s) 375
SfoI GGCGCC 1 cut(s) 149
SinI GGWCC 2 cut(s) 265, 283
SmlI CTYRAG 2 cut(s) 313, 571
SmoI CTYRAG 2 cut(s) 313, 571
Sse9I AATT 4 cut(s) 238, 408, 460, 473
SsiI CCGC 3 cut(s) 155, 176, 207
SspDI GGCGCC 1 cut(s) 147
StyD4I CCNGG 2 cut(s) 157, 189
StyI CCWWGG 1 cut(s) 288
TaaI ACNGT 1 cut(s) 535
TaiI ACGT 2 cut(s) 198, 507
TaqI TCGA 1 cut(s) 354
TasI AATT 4 cut(s) 238, 408, 460, 473
TauI GCSGC 1 cut(s) 178
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 2 cut(s) 359, 378
Tru9I TTAA 2 cut(s) 359, 378
TscAI CASTG 1 cut(s) 538
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 2 cut(s) 100, 172
Tsp45I GTSAC 1 cut(s) 529
TspDTI ATGAA 3 cut(s) 232, 428, 557
TspRI CASTG 1 cut(s) 538
Van91I CCANNNNNTGG 1 cut(s) 196
VpaK11BI GGWCC 2 cut(s) 265, 283
XapI RAATTY 4 cut(s) 238, 408, 460, 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.