RchiOBHm_Chr7g0221591

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0014824
Physical Location & Seq
Reverse (-)
42663848 .. 42664241
394 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19829

Sequence Viewer

Length: 288 bp
ATGGAGTTTAAGCCGGAGAGGTTTTTCAGCAAGGAGGGAGGAGATCAGGGGTTTGATATAACAGGGAGCAGAGAGATTAAGATGATGCCGTTTGGGGTTGGGAGGAGGATTTGCCCTGGACTTGGTTTGGCTGTGCTTCATCTGGAGTATTTTGTGGCGAATTTGGTGTGGAAATTCGAGTGGAGAGGTGTGGAGGGAGAGGATGTTGACTTCGCAGAGAAGCAAGAGTTCACAATGGTCATGAGGAATCCATTGAAGGCGAACATTTCACCAAGAGTGATGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00830 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map01100 map04913 map04917 map04927 map04934 map05204
Pfam Domains
Protein Families
p450

Protein Analysis

95

Amino Acids

10.97

Weight (kDa)

6.58

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 88 4.8e-15 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 160, 173
AfiI CCNNNNNNNGG 1 cut(s) 122
AgsI TTSAA 1 cut(s) 256
AjnI CCWGG 1 cut(s) 115
ApoI RAATTY 2 cut(s) 160, 173
AsuHPI GGTGA 1 cut(s) 261
BceAI ACGGC 1 cut(s) 73
BciT130I CCWGG 1 cut(s) 117
Bme1390I CCNGG 1 cut(s) 117
BmrFI CCNGG 1 cut(s) 117
BmsI GCATC 1 cut(s) 75
BpmI CTGGAG 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 115
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 122
BseBI CCWGG 1 cut(s) 117
BseDI CCNNGG 1 cut(s) 115
BseGI GGATG 1 cut(s) 208
BseLI CCNNNNNNNGG 1 cut(s) 122
BseRI GAGGAG 2 cut(s) 54, 118
BsiSI CCGG 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 122
Bsp143I GATC 1 cut(s) 43
BspHI TCATGA 1 cut(s) 240
BssECI CCNNGG 1 cut(s) 115
BssMI GATC 1 cut(s) 43
Bst2UI CCWGG 1 cut(s) 117
BstF5I GGATG 1 cut(s) 208
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 117
BstSCI CCNGG 1 cut(s) 115
BtsCI GGATG 1 cut(s) 208
CciI TCATGA 1 cut(s) 240
CviAII CATG 1 cut(s) 241
CviJI RGCY 2 cut(s) 13, 131
CviKI_1 RGCY 2 cut(s) 13, 131
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 115
FaeI CATG 1 cut(s) 244
FaiI YATR 2 cut(s) 59, 242
FatI CATG 1 cut(s) 240
FokI GGATG 1 cut(s) 215
GsuI CTGGAG 1 cut(s) 164
HapII CCGG 1 cut(s) 14
Hin1II CATG 1 cut(s) 244
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HinfI GANTC 1 cut(s) 247
HpaII CCGG 1 cut(s) 14
HphI GGTGA 1 cut(s) 261
Hpy166II GTNNAC 2 cut(s) 208, 231
Hpy188III TCNNGA 2 cut(s) 143, 241
Hpy8I GTNNAC 2 cut(s) 208, 231
HpyAV CCTTC 1 cut(s) 250
Hsp92II CATG 1 cut(s) 244
Kzo9I GATC 1 cut(s) 43
LmnI GCTCC 1 cut(s) 66
LpnPI CCDG 6 cut(s) 27, 32, 48, 102, 128, 129
LweI GCATC 1 cut(s) 75
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MluCI AATT 2 cut(s) 160, 173
MnlI CCTC 9 cut(s) 12, 28, 32, 96, 99, 179, 187, 193, 237
MseI TTAA 2 cut(s) 9, 78
MspI CCGG 1 cut(s) 14
MspR9I CCNGG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 117
NdeII GATC 1 cut(s) 43
NlaIII CATG 1 cut(s) 244
PagI TCATGA 1 cut(s) 240
PfeI GAWTC 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
SaqAI TTAA 2 cut(s) 9, 78
Sau3AI GATC 1 cut(s) 43
ScrFI CCNGG 1 cut(s) 117
SetI ASST 2 cut(s) 23, 190
SfaNI GCATC 1 cut(s) 75
Sse9I AATT 2 cut(s) 160, 173
StyD4I CCNGG 1 cut(s) 115
TaqI TCGA 1 cut(s) 177
TasI AATT 2 cut(s) 160, 173
TfiI GAWTC 1 cut(s) 247
Tru1I TTAA 2 cut(s) 9, 78
Tru9I TTAA 2 cut(s) 9, 78
TspDTI ATGAA 1 cut(s) 128
XapI RAATTY 2 cut(s) 160, 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.