Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0017368

Physical Location & Seq

Genomic Coordinates Reverse (-)

28920382 .. 28923536

Gene Structure 3155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G301100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGTCCTCCAGTGCATTGTCTCTCAAGAAAAAGCTCTTGAAGCCAACCTCATTTTTTGGTGTCAAGTTATGGGTTTTGCTTGTAATCTTCATTGTTCTATTCACAGTTCTCACTCTTATAGTCTTCCTGCTCTGTGTCATCCATTACCGTCGTCAAAAATCCTACAAATCCCGTTTTTGCTTCCAAAATCCCATAGCTTCCAAAAATCCACACAATGCATATTGTAGTTCATCCCTTGATCGGAGGCTACTTTCGCTTAACCTTTCGGAAATTGGGATGAACAGCGGGAAGCTGCGGCAACATCATGGACAGCTGTTTTCAGATCAGCTGTCCTCTACTCAGCAGGCTAGTGGGAGAATCCAAAATAGTTATGTGACTGACTTGGAATCGGTTTCTAGGTACTCACCAATGGTGAAGGATGTGTGGAGGGGCAACAAGTTTACTCTGGGGGAGCTTGAGGTAGCAACAAACGGGTTTTCGAAAGAGAATCTGATTGGTAATGGAGATTATGGAATTGTTTATCATGGCATTCTGTTTGATAATACTCGTGTGGCAGTGAAGAGGCTTGTGAGTGACAGTTTCCAAGTCGAGGACTTCATAGCAGAAATGGAGGCAATCGGGTTTGTGAGACACAAAAATCTTGTCAAGTTGCTTGGATACCATATTGAAAAAGCATACAGATTGCTCGTGAATGAGTATGTAGATAACAAAAATCTGCAGCATTGGCTTCATGAATGCTCCACTCAAGTCAGCCCTCTAACATGGAGCATTCGGGTGAAAATAATCCAAGGCATAGCAAAAGGATTGGCCTACCTTCATGAGGATATTGAACCAAAAGTCCTACATAGAACACTAACATCTAGCAATGTACTGCTTGATCACCAGTGGGATCCTAAGATCTCAGATTTTGGCCTTGCTAAGCTTTACAATCCTGAGTGGGGGATCACTATAATGGAATCACTAGGTTACATTGATCCAGAATATGCTGCCACTGGTGATTTCACAGAGGAGTCCGATGTTTATAGTTTTGGGGTACTTATCATGGAGACCATATCTGGGAGGAACCCTATAGATCGAAGTCAACCGCAACCATATCTAGTTGACTGGTTAAAGTCCATGGTTGCCAGTCAAAAAATTGCTTGTGTGGTGGATCCTAAGTTGCCAGAGAAGCCCTCTTCAAAGGAACTCAAAAGGGTACTTTTGGTTGCTTTTCGCTGCGTTGATCCCGATTTAGAACATAGGCCTAGAATGGGAGAAGTTATTCACATGCTTGAGCCACGTGACTTGCTACTCTGTGATGATCAAAGGCTTAAGAAAGAAACTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

443

Amino Acids

50.56

Weight (kDa)

8.49

Isoelectric Point (pI)

31.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017368)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g30240
malus_domestica	MD01G1208500.v1.1
prunus_persica	Prupe.2G301100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0378371
rosa_laevigata	RLG00000026440
rosa_multiflora	Rmu_sc0013545.1_g000010
rosa_roxburghii	Rroxscaffold_4G00280500
rosa_rugosa	Rorug01G0408300
rosa_samantha	Rh1AG429800 Rh1BG387500 Rh1CG401000 Rh1DG418600
rosa_wichuraiana	Rw1G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	285, 295, 1085
AclWI	GGATC	7 cut(s)	884, 897, 950, 968, 1145, 1158, 1217
AcvI	CACGTG	1 cut(s)	1280
AfaI	GTAC	4 cut(s)	401, 870, 1035, 1197
AfiI	CCNNNNNNNGG	6 cut(s)	240, 589, 820, 938, 1056, 1250
AflII	CTTAAG	1 cut(s)	1310
AgsI	TTSAA	4 cut(s)	40, 668, 830, 1179
AloI	GAACNNNNNNTCC	2 cut(s)	822, 854
AluBI	AGCT	7 cut(s)	34, 197, 292, 313, 328, 454, 922
AluI	AGCT	7 cut(s)	34, 197, 292, 313, 328, 454, 922
Alw26I	GTCTC	3 cut(s)	24, 622, 1040
AlwI	GGATC	7 cut(s)	884, 897, 950, 968, 1145, 1158, 1217
AoxI	GGCC	3 cut(s)	807, 910, 1241
ApeKI	GCWGC	4 cut(s)	292, 718, 986, 1215
ArsI	GACNNNNNNTTYG	2 cut(s)	627, 659
Asp700I	GAANNNNTTC	1 cut(s)	1260
AsuHPI	GGTGA	5 cut(s)	396, 424, 787, 872, 1007
AsuII	TTCGAA	1 cut(s)	479
BamHI	GGATCC	2 cut(s)	889, 1150
BauI	CACGAG	2 cut(s)	546, 686
BbrPI	CACGTG	1 cut(s)	1280
BbsI	GAAGAC	1 cut(s)	115
BbvI	GCAGC	4 cut(s)	279, 730, 973, 1202
BciVI	GTATCC	1 cut(s)	650
BclI	TGATCA	2 cut(s)	877, 1300
BcoDI	GTCTC	3 cut(s)	24, 622, 1040
BfaI	CTAG	6 cut(s)	348, 396, 861, 962, 1097, 1245
BfmI	CTRYAG	2 cut(s)	716, 1068
BfrI	CTTAAG	1 cut(s)	1310
BfuI	GTATCC	1 cut(s)	650
BglII	AGATCT	1 cut(s)	897
BisI	GCNGC	5 cut(s)	293, 296, 719, 987, 1216
BlpI	GCTNAGC	1 cut(s)	918
BlsI	GCNGC	5 cut(s)	294, 297, 720, 988, 1217
BmiI	GGNNCC	3 cut(s)	891, 1064, 1152
BpiI	GAAGAC	1 cut(s)	115
BplI	GAGNNNNNCTC	2 cut(s)	1157, 1189
Bpu1102I	GCTNAGC	1 cut(s)	918
Bpu14I	TTCGAA	1 cut(s)	479
BpuEI	CTTGAG	4 cut(s)	8, 476, 729, 1292
BsaAI	YACGTR	1 cut(s)	1280
BsaI	GGTCTC	1 cut(s)	1040
BsaJI	CCNNGG	2 cut(s)	787, 1116
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 589, 820, 938, 1056, 1250
Bse1I	ACTGG	5 cut(s)	9, 883, 997, 1109, 1125
Bse3DI	GCAATG	1 cut(s)	871
BseDI	CCNNGG	2 cut(s)	787, 1116
BseGI	GGATG	4 cut(s)	138, 230, 282, 424
BseLI	CCNNNNNNNGG	6 cut(s)	240, 589, 820, 938, 1056, 1250
BseMI	GCAATG	1 cut(s)	871
BseMII	CTCAG	3 cut(s)	353, 915, 924
BseNI	ACTGG	5 cut(s)	9, 883, 997, 1109, 1125
BseRI	GAGGAG	1 cut(s)	1022
BseXI	GCAGC	4 cut(s)	279, 730, 973, 1202
BshFI	GGCC	3 cut(s)	809, 912, 1243
BslI	CCNNNNNNNGG	6 cut(s)	240, 589, 820, 938, 1056, 1250
BsmAI	GTCTC	3 cut(s)	24, 622, 1040
BsmI	GAATGC	3 cut(s)	528, 740, 768
BsnI	GGCC	3 cut(s)	809, 912, 1243
Bso31I	GGTCTC	1 cut(s)	1040
Bsp119I	TTCGAA	1 cut(s)	479
Bsp1720I	GCTNAGC	1 cut(s)	918
Bsp19I	CCATGG	1 cut(s)	1116
BspACI	CCGC	3 cut(s)	285, 295, 1085
BspANI	GGCC	3 cut(s)	809, 912, 1243
BspCNI	CTCAG	3 cut(s)	352, 914, 925
BspHI	TCATGA	2 cut(s)	730, 817
BspLI	GGNNCC	3 cut(s)	891, 1064, 1152
BspMAI	CTGCAG	1 cut(s)	720
BspPI	GGATC	7 cut(s)	884, 897, 950, 968, 1145, 1158, 1217
BspT104I	TTCGAA	1 cut(s)	479
BspTI	CTTAAG	1 cut(s)	1310
BspTNI	GGTCTC	1 cut(s)	1040
BsrDI	GCAATG	1 cut(s)	871
BsrI	ACTGG	5 cut(s)	9, 883, 997, 1109, 1125
BssECI	CCNNGG	2 cut(s)	787, 1116
BssSI	CACGAG	2 cut(s)	546, 686
BssT1I	CCWWGG	2 cut(s)	787, 1116
Bst2BI	CACGAG	2 cut(s)	546, 686
Bst4CI	ACNGT	3 cut(s)	106, 149, 578
Bst6I	CTCTTC	2 cut(s)	554, 1180
BstAFI	CTTAAG	1 cut(s)	1310
BstBAI	YACGTR	1 cut(s)	1280
BstBI	TTCGAA	1 cut(s)	479
BstC8I	GCNNGC	1 cut(s)	345
BstDEI	CTNAG	6 cut(s)	339, 894, 901, 918, 933, 1155
BstDSI	CCRYGG	1 cut(s)	1116
BstENI	CCTNNNNNAGG	1 cut(s)	818
BstF5I	GGATG	4 cut(s)	138, 230, 282, 424
BstMAI	GTCTC	3 cut(s)	24, 622, 1040
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 253, 724, 1168
BstNSI	RCATGY	1 cut(s)	1270
BstSFI	CTRYAG	2 cut(s)	716, 1068
BstV1I	GCAGC	4 cut(s)	279, 730, 973, 1202
BstV2I	GAAGAC	1 cut(s)	115
BstX2I	RGATCY	3 cut(s)	889, 897, 1150
BstYI	RGATCY	3 cut(s)	889, 897, 1150
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	3 cut(s)	809, 912, 1243
BtgI	CCRYGG	1 cut(s)	1116
BtsCI	GGATG	4 cut(s)	138, 230, 282, 424
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	4 cut(s)	16, 561, 890, 990
Cac8I	GCNNGC	1 cut(s)	345
CciI	TCATGA	2 cut(s)	730, 817
Csp6I	GTAC	4 cut(s)	400, 869, 1034, 1196
CspCI	CAANNNNNGTGG	2 cut(s)	1266, 1301
CviAII	CATG	8 cut(s)	305, 524, 731, 762, 818, 1042, 1117, 1267
CviQI	GTAC	4 cut(s)	400, 869, 1034, 1196
DdeI	CTNAG	6 cut(s)	339, 894, 901, 918, 933, 1155
Eam1104I	CTCTTC	2 cut(s)	554, 1180
EarI	CTCTTC	2 cut(s)	554, 1180
Eco130I	CCWWGG	2 cut(s)	787, 1116
Eco147I	AGGCCT	1 cut(s)	1243
Eco31I	GGTCTC	1 cut(s)	1040
Eco72I	CACGTG	1 cut(s)	1280
EcoNI	CCTNNNNNAGG	1 cut(s)	818
EcoT14I	CCWWGG	2 cut(s)	787, 1116
EcoT22I	ATGCAT	1 cut(s)	220
ErhI	CCWWGG	2 cut(s)	787, 1116
FaeI	CATG	8 cut(s)	308, 527, 734, 765, 821, 1045, 1120, 1270
FatI	CATG	8 cut(s)	304, 523, 730, 761, 817, 1041, 1116, 1266
FauI	CCCGC	1 cut(s)	278
FbaI	TGATCA	2 cut(s)	877, 1300
Fnu4HI	GCNGC	5 cut(s)	293, 296, 719, 987, 1216
FokI	GGATG	4 cut(s)	125, 217, 289, 431
Fsp4HI	GCNGC	5 cut(s)	293, 296, 719, 987, 1216
FspBI	CTAG	6 cut(s)	348, 396, 861, 962, 1097, 1245
GluI	GCNGC	5 cut(s)	293, 296, 719, 987, 1216
HaeIII	GGCC	3 cut(s)	809, 912, 1243
Hin1II	CATG	8 cut(s)	308, 527, 734, 765, 821, 1045, 1120, 1270
HincII	GTYRAC	2 cut(s)	1082, 1102
HindII	GTYRAC	2 cut(s)	1082, 1102
HindIII	AAGCTT	1 cut(s)	920
HinfI	GANTC	5 cut(s)	357, 386, 487, 956, 1010
HphI	GGTGA	5 cut(s)	396, 424, 787, 872, 1007
Hpy166II	GTNNAC	3 cut(s)	441, 1082, 1102
Hpy188I	TCNGA	6 cut(s)	243, 268, 322, 492, 904, 1015
Hpy188III	TCNNGA	8 cut(s)	25, 37, 688, 731, 818, 932, 977, 1226
Hpy8I	GTNNAC	3 cut(s)	441, 1082, 1102
Hpy99I	CGWCG	1 cut(s)	153
HpyAV	CCTTC	2 cut(s)	409, 824
HpyCH4III	ACNGT	3 cut(s)	106, 149, 578
HpyCH4IV	ACGT	1 cut(s)	1279
HpyCH4V	TGCA	3 cut(s)	14, 218, 718
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 253, 724, 1168
HpyF3I	CTNAG	6 cut(s)	339, 894, 901, 918, 933, 1155
HpySE526I	ACGT	1 cut(s)	1279
Hsp92II	CATG	8 cut(s)	308, 527, 734, 765, 821, 1045, 1120, 1270
Ksp22I	TGATCA	2 cut(s)	877, 1300
LmnI	GCTCC	3 cut(s)	451, 743, 765
Lsp1109I	GCAGC	4 cut(s)	279, 730, 973, 1202
MaeI	CTAG	6 cut(s)	348, 396, 861, 962, 1097, 1245
MaeII	ACGT	1 cut(s)	1279
MaeIII	GTNAC	4 cut(s)	373, 572, 965, 1280
MboII	GAAGA	4 cut(s)	79, 115, 571, 1167
MflI	RGATCY	3 cut(s)	889, 897, 1150
MluCI	AATT	3 cut(s)	270, 513, 1134
MlyI	GAGTC	1 cut(s)	1019
Mph1103I	ATGCAT	1 cut(s)	220
MroXI	GAANNNNTTC	1 cut(s)	1260
MseI	TTAA	3 cut(s)	258, 1109, 1311
MslI	CAYNNNNRTG	2 cut(s)	773, 950
MspA1I	CMGCKG	3 cut(s)	285, 313, 328
MspCI	CTTAAG	1 cut(s)	1310
Mva1269I	GAATGC	3 cut(s)	528, 740, 768
MwoI	GCNNNNNNNGC	4 cut(s)	40, 253, 724, 1168
NcoI	CCATGG	1 cut(s)	1116
NlaIII	CATG	8 cut(s)	308, 527, 734, 765, 821, 1045, 1120, 1270
NlaIV	GGNNCC	3 cut(s)	891, 1064, 1152
NmuCI	GTSAC	3 cut(s)	373, 572, 1280
NsiI	ATGCAT	1 cut(s)	220
NspI	RCATGY	1 cut(s)	1270
NspV	TTCGAA	1 cut(s)	479
PagI	TCATGA	2 cut(s)	730, 817
PceI	AGGCCT	1 cut(s)	1243
PctI	GAATGC	3 cut(s)	528, 740, 768
PdmI	GAANNNNTTC	1 cut(s)	1260
PfeI	GAWTC	4 cut(s)	357, 386, 487, 956
PkrI	GCNGC	5 cut(s)	294, 297, 720, 988, 1217
PleI	GAGTC	1 cut(s)	1018
PmaCI	CACGTG	1 cut(s)	1280
PmlI	CACGTG	1 cut(s)	1280
PpsI	GAGTC	1 cut(s)	1018
Ppu21I	YACGTR	1 cut(s)	1280
PspCI	CACGTG	1 cut(s)	1280
PspN4I	GGNNCC	3 cut(s)	891, 1064, 1152
PstI	CTGCAG	1 cut(s)	720
PsuI	RGATCY	3 cut(s)	889, 897, 1150
PvuII	CAGCTG	2 cut(s)	313, 328
RsaI	GTAC	4 cut(s)	401, 870, 1035, 1197
RsaNI	GTAC	4 cut(s)	400, 869, 1034, 1196
RseI	CAYNNNNRTG	2 cut(s)	773, 950
SaqAI	TTAA	3 cut(s)	258, 1109, 1311
SatI	GCNGC	5 cut(s)	293, 296, 719, 987, 1216
SchI	GAGTC	1 cut(s)	1019
SfcI	CTRYAG	2 cut(s)	716, 1068
SfuI	TTCGAA	1 cut(s)	479
SmiMI	CAYNNNNRTG	2 cut(s)	773, 950
SmlI	CTYRAG	5 cut(s)	23, 455, 744, 1271, 1310
SmoI	CTYRAG	5 cut(s)	23, 455, 744, 1271, 1310
Sse9I	AATT	3 cut(s)	270, 513, 1134
SseBI	AGGCCT	1 cut(s)	1243
SsiI	CCGC	3 cut(s)	285, 295, 1085
SspMI	CTAG	6 cut(s)	348, 396, 861, 962, 1097, 1245
StuI	AGGCCT	1 cut(s)	1243
StyI	CCWWGG	2 cut(s)	787, 1116
TaaI	ACNGT	3 cut(s)	106, 149, 578
TaiI	ACGT	1 cut(s)	1282
TaqI	TCGA	3 cut(s)	479, 588, 1075
TasI	AATT	3 cut(s)	270, 513, 1134
TatI	WGTACW	1 cut(s)	868
TauI	GCSGC	1 cut(s)	298
TfiI	GAWTC	4 cut(s)	357, 386, 487, 956
Tru1I	TTAA	3 cut(s)	258, 1109, 1311
Tru9I	TTAA	3 cut(s)	258, 1109, 1311
TscAI	CASTG	4 cut(s)	16, 561, 890, 997
TseFI	GTSAC	3 cut(s)	373, 572, 1280
TseI	GCWGC	4 cut(s)	292, 718, 986, 1215
Tsp45I	GTSAC	3 cut(s)	373, 572, 1280
TspDTI	ATGAA	7 cut(s)	79, 219, 293, 586, 719, 747, 806
TspRI	CASTG	4 cut(s)	16, 561, 890, 997
Vha464I	CTTAAG	1 cut(s)	1310
XagI	CCTNNNNNAGG	1 cut(s)	818
XceI	RCATGY	1 cut(s)	1270
XmnI	GAANNNNTTC	1 cut(s)	1260
XspI	CTAG	6 cut(s)	348, 396, 861, 962, 1097, 1245
Zsp2I	ATGCAT	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.