Rmu_sc0013545.1_g000010

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013545.1
Physical Location & Seq
Reverse (-)
53784 .. 55722
1939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013545.1_g000010.1.cds

Sequence Viewer

Length: 1383 bp
atgactctgctctctgataagcttcttcatctctctgaaactatgtcttccgctacattatctctgaagcaaatgctcatgaagccaacctcattgtttggtgccaagttatgggttctgcttgtgaccttcactgttctattcacccttctggtgattgtctttgtcttggtgatctatatcatccggtaccgccggcaccggaagtcctacaattcccatttgtgtgtacaaaatcccattgcttccaaagtccctcacattgcttatggtcactcatctcttgatcggaggctgctttcgcttaacatgtccaaaattgagatgaacaatgggaaggagaggcaaactgtgctctctgatcagctgtcctctaccggcgccagtgggataacccccactagtactaaggtgagtgaatcggaatataggtactcttcggtggttaaagatgtgtggaggggtgacaagtttactctaagggaacttgaggcagcaacaaatgggtttggtagagaaaatctgattggcaatggagactatggcattgtatatcatggtattctgtttgataatattcgtgtggcggtgaagaggcttgatgacttcatagcagaaatggaggcgattgggcatgtgagacacaaaaatcttgtcaagatgcttggatacagaatcgaaagagcttacagattgcttgtgcatgagtatgtagataacaaaagtctgcaccattggcttcatgaatgttcaagaagtgtcagccctctaacatgggatattcggatgaaaataatccatggaatagcaaaaggattggcctaccttcatgaggatattgaaccaaaaattttccatagaagcctaatatctagcaatgtactgcttggtcaccaatgggatcctaagatttctgattttggccttgctaagctatacagtccggcgtggggaatcaccataatggaatcgttaggttatgttgccccagaatatgctgccactggtgattttaatgagaagtcggatgtttatagcttcggagtgttgattatggagataatttctggcaggactcctattgaccgcactcaacaccaaccatatctggtagactggttaaagtccatggttgccagtcaaagaactgcttatgtagttgatcctaaattgccagagaagccatcttcaaaagaactcaaaagggttcttctggttgctcttcgttgcgctgatcctgatttagaagataggcctagaatgggagaagttcttcacatgcttgagccccgcgacttgctaatgctcgacgatcgatggcttaagagatcgagagactgctcatcatctttgcctacaagagagcttctgcaagaacgatga

Protein Analysis

460

Amino Acids

52.66

Weight (kDa)

9.08

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017368)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g30240
malus_domestica MD01G1208500.v1.1
prunus_persica Prupe.2G301100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0378371
rosa_laevigata RLG00000026440
rosa_multiflora Rmu_sc0013545.1_g000010
rosa_roxburghii Rroxscaffold_4G00280500
rosa_rugosa Rorug01G0408300
rosa_samantha Rh1AG429800 Rh1BG387500 Rh1CG401000 Rh1DG418600
rosa_wichuraiana Rw1G037610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 189
AccB1I GGYRCC 4 cut(s) 101, 189, 198, 380
AccB7I CCANNNNNTGG 1 cut(s) 111
AccI GTMKAC 1 cut(s) 1113
AccII CGCG 1 cut(s) 1293
AciI CCGC 5 cut(s) 51, 193, 587, 1087, 1291
AclWI GGATC 4 cut(s) 896, 909, 1157, 1229
AcsI RAATTY 1 cut(s) 849
AcuI CTGAAG 1 cut(s) 86
AcyI GRCGYC 1 cut(s) 381
AfaI GTAC 5 cut(s) 191, 231, 406, 434, 882
AfiI CCNNNNNNNGG 4 cut(s) 111, 832, 950, 1262
AflII CTTAAG 1 cut(s) 1322
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 3 cut(s) 753, 842, 1191
AhlI ACTAGT 1 cut(s) 401
AjuI GAANNNNNNNTTGG 2 cut(s) 510, 542
AluBI AGCT 6 cut(s) 22, 367, 686, 934, 1038, 1366
AluI AGCT 6 cut(s) 22, 367, 686, 934, 1038, 1366
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 3 cut(s) 531, 634, 1329
AlwI GGATC 4 cut(s) 896, 909, 1157, 1229
AoxI GGCC 3 cut(s) 819, 922, 1253
ApeKI GCWGC 3 cut(s) 295, 494, 998
ApoI RAATTY 1 cut(s) 849
ArsI GACNNNNNNTTYG 2 cut(s) 639, 671
Asp700I GAANNNNTTC 1 cut(s) 1272
Asp718I GGTACC 1 cut(s) 189
AspLEI GCGC 2 cut(s) 383, 1232
AsuHPI GGTGA 9 cut(s) 136, 166, 184, 424, 476, 601, 884, 949, 1019
BamHI GGATCC 1 cut(s) 901
BanI GGYRCC 4 cut(s) 101, 189, 198, 380
BanII GRGCYC 1 cut(s) 1290
BbsI GAAGAC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 357
BbvI GCAGC 3 cut(s) 282, 506, 985
BccI CCATC 2 cut(s) 1192, 1311
BciVI GTATCC 1 cut(s) 662
BclI TGATCA 1 cut(s) 361
BcoDI GTCTC 3 cut(s) 531, 634, 1329
BcuI ACTAGT 1 cut(s) 401
BfaI CTAG 3 cut(s) 402, 873, 1257
BfoI RGCGCY 1 cut(s) 384
BfrI CTTAAG 1 cut(s) 1322
BfuI GTATCC 1 cut(s) 662
BisI GCNGC 3 cut(s) 296, 495, 999
BlpI GCTNAGC 1 cut(s) 930
BlsI GCNGC 3 cut(s) 297, 496, 1000
BmcAI AGTACT 1 cut(s) 406
BmiI GGNNCC 5 cut(s) 103, 191, 200, 382, 903
BmsI GCATC 1 cut(s) 651
BpiI GAAGAC 1 cut(s) 39
Bpu1102I GCTNAGC 1 cut(s) 930
BpuEI CTTGAG 2 cut(s) 509, 1304
Bsa29I ATCGAT 1 cut(s) 1315
BsaBI GATNNNNATC 1 cut(s) 179
BsaHI GRCGYC 1 cut(s) 381
BsaJI CCNNGG 2 cut(s) 799, 1128
BsaWI WCCGGW 2 cut(s) 186, 201
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 832, 950, 1262
Bse118I RCCGGY 2 cut(s) 195, 377
Bse1I ACTGG 4 cut(s) 384, 1009, 1121, 1137
Bse3DI GCAATG 4 cut(s) 240, 261, 538, 883
Bse8I GATNNNNATC 1 cut(s) 179
BseCI ATCGAT 1 cut(s) 1315
BseDI CCNNGG 2 cut(s) 799, 1128
BseGI GGATG 3 cut(s) 183, 792, 1033
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 4 cut(s) 111, 832, 950, 1262
BseMI GCAATG 4 cut(s) 240, 261, 538, 883
BseNI ACTGG 4 cut(s) 384, 1009, 1121, 1137
BseXI GCAGC 3 cut(s) 282, 506, 985
BsgI GTGCAG 1 cut(s) 713
Bsh1236I CGCG 1 cut(s) 1293
Bsh1285I CGRYCG 1 cut(s) 1315
BshFI GGCC 3 cut(s) 821, 924, 1255
BshNI GGYRCC 4 cut(s) 101, 189, 198, 380
BshVI ATCGAT 1 cut(s) 1315
BsiEI CGRYCG 1 cut(s) 1315
BsiHKAI GWGCWC 1 cut(s) 357
BsiSI CCGG 5 cut(s) 187, 196, 202, 378, 944
BslFI GGGAC 1 cut(s) 239
BslI CCNNNNNNNGG 4 cut(s) 111, 832, 950, 1262
BsmAI GTCTC 3 cut(s) 531, 634, 1329
BsmFI GGGAC 1 cut(s) 239
BsnI GGCC 3 cut(s) 821, 924, 1255
Bsp1286I GDGCHC 2 cut(s) 357, 1290
Bsp1407I TGTACA 1 cut(s) 229
Bsp143I GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
Bsp1720I GCTNAGC 1 cut(s) 930
Bsp19I CCATGG 2 cut(s) 799, 1128
BspACI CCGC 5 cut(s) 51, 193, 587, 1087, 1291
BspANI GGCC 3 cut(s) 821, 924, 1255
BspDI ATCGAT 1 cut(s) 1315
BspFNI CGCG 1 cut(s) 1293
BspHI TCATGA 3 cut(s) 78, 742, 829
BspLI GGNNCC 5 cut(s) 103, 191, 200, 382, 903
BspPI GGATC 4 cut(s) 896, 909, 1157, 1229
BspQI GCTCTTC 1 cut(s) 1227
BspT107I GGYRCC 4 cut(s) 101, 189, 198, 380
BspTI CTTAAG 1 cut(s) 1322
BsrDI GCAATG 4 cut(s) 240, 261, 538, 883
BsrFI RCCGGY 2 cut(s) 195, 377
BsrGI TGTACA 1 cut(s) 229
BsrI ACTGG 4 cut(s) 384, 1009, 1121, 1137
BssAI RCCGGY 2 cut(s) 195, 377
BssECI CCNNGG 2 cut(s) 799, 1128
BssMI GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
BssNI GRCGYC 1 cut(s) 381
BssT1I CCWWGG 2 cut(s) 799, 1128
Bst4CI ACNGT 3 cut(s) 136, 352, 941
Bst6I CTCTTC 3 cut(s) 442, 587, 1227
BstACI GRCGYC 1 cut(s) 381
BstAFI CTTAAG 1 cut(s) 1322
BstAPI GCANNNNNTGC 1 cut(s) 352
BstAUI TGTACA 1 cut(s) 229
BstC8I GCNNGC 1 cut(s) 197
BstDEI CTNAG 4 cut(s) 408, 479, 906, 930
BstDSI CCRYGG 2 cut(s) 799, 1128
BstEII GGTNACC 1 cut(s) 890
BstENI CCTNNNNNAGG 1 cut(s) 830
BstF5I GGATG 3 cut(s) 183, 792, 1033
BstFNI CGCG 1 cut(s) 1293
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 2 cut(s) 383, 1232
BstKTI GATC 8 cut(s) 177, 289, 364, 904, 1165, 1237, 1315, 1331
BstMAI GTCTC 3 cut(s) 531, 634, 1329
BstMBI GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
BstMCI CGRYCG 1 cut(s) 1315
BstMWI GCNNNNNNNGC 5 cut(s) 82, 301, 352, 736, 1180
BstNSI RCATGY 3 cut(s) 313, 638, 1282
BstPI GGTNACC 1 cut(s) 890
BstUI CGCG 1 cut(s) 1293
BstV1I GCAGC 3 cut(s) 282, 506, 985
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 901
BstYI RGATCY 1 cut(s) 901
Bsu15I ATCGAT 1 cut(s) 1315
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 3 cut(s) 821, 924, 1255
BsuTUI ATCGAT 1 cut(s) 1315
BtgI CCRYGG 2 cut(s) 799, 1128
BtsCI GGATG 3 cut(s) 183, 792, 1033
BtsIMutI CAGTG 3 cut(s) 132, 391, 1002
Cac8I GCNNGC 1 cut(s) 197
CciI TCATGA 3 cut(s) 78, 742, 829
CfoI GCGC 2 cut(s) 383, 1232
Cfr10I RCCGGY 2 cut(s) 195, 377
ClaI ATCGAT 1 cut(s) 1315
Csp6I GTAC 5 cut(s) 190, 230, 405, 433, 881
CviQI GTAC 5 cut(s) 190, 230, 405, 433, 881
DdeI CTNAG 4 cut(s) 408, 479, 906, 930
DinI GGCGCC 1 cut(s) 382
DpnI GATC 8 cut(s) 176, 288, 363, 903, 1164, 1236, 1314, 1330
DpnII GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
Eam1104I CTCTTC 3 cut(s) 442, 587, 1227
EarI CTCTTC 3 cut(s) 442, 587, 1227
Eco130I CCWWGG 2 cut(s) 799, 1128
Eco147I AGGCCT 1 cut(s) 1255
Eco24I GRGCYC 1 cut(s) 1290
Eco57I CTGAAG 1 cut(s) 86
Eco91I GGTNACC 1 cut(s) 890
EcoNI CCTNNNNNAGG 1 cut(s) 830
EcoO65I GGTNACC 1 cut(s) 890
EcoT14I CCWWGG 2 cut(s) 799, 1128
EcoT38I GRGCYC 1 cut(s) 1290
EgeI GGCGCC 1 cut(s) 382
EheI GGCGCC 1 cut(s) 382
ErhI CCWWGG 2 cut(s) 799, 1128
FalI AAGNNNNNCTT 2 cut(s) 1135, 1167
FaqI GGGAC 1 cut(s) 239
FauI CCCGC 1 cut(s) 1298
FbaI TGATCA 1 cut(s) 361
FblI GTMKAC 1 cut(s) 1113
Fnu4HI GCNGC 3 cut(s) 296, 495, 999
FokI GGATG 3 cut(s) 170, 799, 1040
FriOI GRGCYC 1 cut(s) 1290
Fsp4HI GCNGC 3 cut(s) 296, 495, 999
FspBI CTAG 3 cut(s) 402, 873, 1257
GlaI GCGC 2 cut(s) 382, 1231
GluI GCNGC 3 cut(s) 296, 495, 999
HaeII RGCGCY 1 cut(s) 384
HaeIII GGCC 3 cut(s) 821, 924, 1255
HapII CCGG 5 cut(s) 187, 196, 202, 378, 944
HhaI GCGC 2 cut(s) 383, 1232
Hin1I GRCGYC 1 cut(s) 381
Hin6I GCGC 2 cut(s) 381, 1230
HinP1I GCGC 2 cut(s) 381, 1230
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 6 cut(s) 4, 419, 675, 954, 968, 1075
HpaII CCGG 5 cut(s) 187, 196, 202, 378, 944
HphI GGTGA 9 cut(s) 136, 166, 184, 424, 476, 601, 884, 949, 1019
Hpy166II GTNNAC 3 cut(s) 230, 474, 1114
Hpy188III TCNNGA 8 cut(s) 79, 284, 658, 743, 753, 830, 1238, 1332
Hpy8I GTNNAC 3 cut(s) 230, 474, 1114
Hpy99I CGWCG 1 cut(s) 1313
HpyAV CCTTC 4 cut(s) 139, 158, 331, 836
HpyCH4III ACNGT 3 cut(s) 136, 352, 941
HpyCH4V TGCA 3 cut(s) 703, 730, 1372
HpyF10VI GCNNNNNNNGC 5 cut(s) 82, 301, 352, 736, 1180
HpyF3I CTNAG 4 cut(s) 408, 479, 906, 930
Hsp92I GRCGYC 1 cut(s) 381
HspAI GCGC 2 cut(s) 381, 1230
KasI GGCGCC 1 cut(s) 380
KpnI GGTACC 1 cut(s) 193
KroI GCCGGC 1 cut(s) 195
KroNI GCCGGC 1 cut(s) 197
Ksp22I TGATCA 1 cut(s) 361
Kzo9I GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
LguI GCTCTTC 1 cut(s) 1227
Lsp1109I GCAGC 3 cut(s) 282, 506, 985
LweI GCATC 1 cut(s) 651
MaeI CTAG 3 cut(s) 402, 873, 1257
MaeIII GTNAC 4 cut(s) 124, 272, 464, 890
MalI GATC 8 cut(s) 176, 288, 363, 903, 1164, 1236, 1314, 1330
MboI GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
MboII GAAGA 9 cut(s) 17, 39, 429, 604, 1179, 1202, 1214, 1259, 1265
MflI RGATCY 1 cut(s) 901
MhlI GDGCHC 2 cut(s) 357, 1290
MluCI AATT 5 cut(s) 214, 318, 849, 1062, 1169
Mly113I GGCGCC 1 cut(s) 381
MlyI GAGTC 1 cut(s) 1069
MmeI TCCRAC 1 cut(s) 1005
MroNI GCCGGC 1 cut(s) 195
MroXI GAANNNNTTC 1 cut(s) 1272
MseI TTAA 5 cut(s) 306, 447, 1014, 1121, 1323
MslI CAYNNNNRTG 3 cut(s) 225, 708, 962
MspA1I CMGCKG 1 cut(s) 367
MspCI CTTAAG 1 cut(s) 1322
MspI CCGG 5 cut(s) 187, 196, 202, 378, 944
MvnI CGCG 1 cut(s) 1293
MwoI GCNNNNNNNGC 5 cut(s) 82, 301, 352, 736, 1180
NaeI GCCGGC 1 cut(s) 197
NarI GGCGCC 1 cut(s) 381
NcoI CCATGG 2 cut(s) 799, 1128
NdeII GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
NgoMIV GCCGGC 1 cut(s) 195
NlaIV GGNNCC 5 cut(s) 103, 191, 200, 382, 903
NmuCI GTSAC 4 cut(s) 124, 272, 464, 890
NspI RCATGY 3 cut(s) 313, 638, 1282
PagI TCATGA 3 cut(s) 78, 742, 829
PceI AGGCCT 1 cut(s) 1255
PciI ACATGT 1 cut(s) 309
PciSI GCTCTTC 1 cut(s) 1227
PdiI GCCGGC 1 cut(s) 197
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 4 cut(s) 419, 675, 954, 968
PflMI CCANNNNNTGG 1 cut(s) 111
PkrI GCNGC 3 cut(s) 297, 496, 1000
Ple19I CGATCG 1 cut(s) 1315
PleI GAGTC 1 cut(s) 1069
PluTI GGCGCC 1 cut(s) 384
PpsI GAGTC 1 cut(s) 1069
PscI ACATGT 1 cut(s) 309
PspEI GGTNACC 1 cut(s) 890
PspN4I GGNNCC 5 cut(s) 103, 191, 200, 382, 903
PsuI RGATCY 1 cut(s) 901
PvuI CGATCG 1 cut(s) 1315
PvuII CAGCTG 1 cut(s) 367
RsaI GTAC 5 cut(s) 191, 231, 406, 434, 882
RsaNI GTAC 5 cut(s) 190, 230, 405, 433, 881
RseI CAYNNNNRTG 3 cut(s) 225, 708, 962
SapI GCTCTTC 1 cut(s) 1227
SaqAI TTAA 5 cut(s) 306, 447, 1014, 1121, 1323
SatI GCNGC 3 cut(s) 296, 495, 999
Sau3AI GATC 8 cut(s) 174, 286, 361, 901, 1162, 1234, 1312, 1328
ScaI AGTACT 1 cut(s) 406
SchI GAGTC 1 cut(s) 1069
SduI GDGCHC 2 cut(s) 357, 1290
SfaNI GCATC 1 cut(s) 651
SfoI GGCGCC 1 cut(s) 382
SmiMI CAYNNNNRTG 3 cut(s) 225, 708, 962
SmlI CTYRAG 3 cut(s) 488, 1283, 1322
SmoI CTYRAG 3 cut(s) 488, 1283, 1322
SpeI ACTAGT 1 cut(s) 401
Sse9I AATT 5 cut(s) 214, 318, 849, 1062, 1169
SseBI AGGCCT 1 cut(s) 1255
SsiI CCGC 5 cut(s) 51, 193, 587, 1087, 1291
SspDI GGCGCC 1 cut(s) 380
SspI AATATT 1 cut(s) 577
SspMI CTAG 3 cut(s) 402, 873, 1257
StuI AGGCCT 1 cut(s) 1255
StyI CCWWGG 2 cut(s) 799, 1128
TaaI ACNGT 3 cut(s) 136, 352, 941
TaqI TCGA 4 cut(s) 678, 1308, 1315, 1331
TasI AATT 5 cut(s) 214, 318, 849, 1062, 1169
TatI WGTACW 3 cut(s) 229, 404, 880
TfiI GAWTC 4 cut(s) 419, 675, 954, 968
Tru1I TTAA 5 cut(s) 306, 447, 1014, 1121, 1323
Tru9I TTAA 5 cut(s) 306, 447, 1014, 1121, 1323
TscAI CASTG 3 cut(s) 139, 391, 1009
TseFI GTSAC 4 cut(s) 124, 272, 464, 890
TseI GCWGC 3 cut(s) 295, 494, 998
Tsp45I GTSAC 4 cut(s) 124, 272, 464, 890
TspDTI ATGAA 8 cut(s) 17, 95, 341, 598, 731, 759, 803, 818
TspRI CASTG 3 cut(s) 139, 391, 1009
Van91I CCANNNNNTGG 1 cut(s) 111
Vha464I CTTAAG 1 cut(s) 1322
XagI CCTNNNNNAGG 1 cut(s) 830
XapI RAATTY 1 cut(s) 849
XceI RCATGY 3 cut(s) 313, 638, 1282
XmiI GTMKAC 1 cut(s) 1113
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 3 cut(s) 402, 873, 1257
ZrmI AGTACT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.