Protein timeless homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52910 AT5G52910 |
| fragaria_vesca | FvH4_7g30740 FvH4_7g30740 FvH4_7g30740 FvH4_7g30740 FvH4_7g30740 FvH4_7g30740 |
| malus_domestica | MD01G1212700.v1.1 |
| prunus_persica | Prupe.2G304900_v2.0.a1 Prupe.2G304900_v2.0.a1 Prupe.2G304900_v2.0.a1 Prupe.2G304900_v2.0.a1 |
| pyrus_communis | pycom01g22370 |
| rosa_chinensis | RchiOBHm_Chr1g0379691 |
| rosa_laevigata | RLG00000026367 RLG00000026369 |
| rosa_multiflora | Rmu_sc0013028.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00279950 |
| rosa_rugosa | Rorug01G0414700 |
| rosa_samantha | Rh1AG438000 Rh1BG394500 Rh1CG407500 Rh1DG424900 |
| rosa_wichuraiana | Rw1G038170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1617, 2106 |
| Acc16I | TGCGCA | 1 cut(s) | 2993 |
| Acc36I | ACCTGC | 1 cut(s) | 1993 |
| Acc65I | GGTACC | 1 cut(s) | 205 |
| AccB1I | GGYRCC | 2 cut(s) | 205, 3551 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3683 |
| AciI | CCGC | 7 cut(s) | 855, 1091, 1483, 2571, 2987, 3189, 3641 |
| AcoI | YGGCCR | 1 cut(s) | 2410 |
| AcuI | CTGAAG | 4 cut(s) | 1251, 1252, 3001, 3561 |
| AdeI | CACNNNGTG | 1 cut(s) | 2519 |
| AfaI | GTAC | 7 cut(s) | 95, 207, 459, 1496, 2125, 2602, 3714 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1208, 3683 |
| AflII | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| AgeI | ACCGGT | 1 cut(s) | 1979 |
| AhlI | ACTAGT | 1 cut(s) | 1324 |
| AjnI | CCWGG | 2 cut(s) | 2658, 3398 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 277, 309 |
| Alw21I | GWGCWC | 2 cut(s) | 2178, 2544 |
| Alw26I | GTCTC | 5 cut(s) | 741, 776, 1892, 3254, 3397 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2989, 3539 |
| Ama87I | CYCGRG | 1 cut(s) | 2171 |
| AoxI | GGCC | 4 cut(s) | 2410, 2655, 2915, 3285 |
| ApaI | GGGCCC | 1 cut(s) | 2659 |
| AseI | ATTAAT | 3 cut(s) | 2382, 2958, 3275 |
| AsiGI | ACCGGT | 1 cut(s) | 1979 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1026, 1641 |
| Asp718I | GGTACC | 1 cut(s) | 205 |
| AspLEI | GCGC | 2 cut(s) | 2889, 2994 |
| AspS9I | GGNCC | 9 cut(s) | 728, 959, 1286, 2655, 2656, 2915, 3186, 3285, 3587 |
| AsuHPI | GGTGA | 6 cut(s) | 1286, 1793, 1973, 1994, 2531, 3122 |
| AsuII | TTCGAA | 1 cut(s) | 1423 |
| AvaI | CYCGRG | 1 cut(s) | 2171 |
| AvaII | GGWCC | 5 cut(s) | 728, 959, 1286, 3186, 3587 |
| AxyI | CCTNAGG | 1 cut(s) | 732 |
| BaeGI | GKGCMC | 1 cut(s) | 2659 |
| BalI | TGGCCA | 1 cut(s) | 2412 |
| BanI | GGYRCC | 2 cut(s) | 205, 3551 |
| BanII | GRGCYC | 2 cut(s) | 2178, 2659 |
| BbsI | GAAGAC | 4 cut(s) | 336, 1179, 2363, 2529 |
| Bbv12I | GWGCWC | 2 cut(s) | 2178, 2544 |
| BceAI | ACGGC | 1 cut(s) | 3546 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 55, 89, 1067, 1101 |
| BciT130I | CCWGG | 2 cut(s) | 2660, 3400 |
| BciVI | GTATCC | 1 cut(s) | 1087 |
| BcoDI | GTCTC | 5 cut(s) | 741, 776, 1892, 3254, 3397 |
| BcuI | ACTAGT | 1 cut(s) | 1324 |
| BfaI | CTAG | 9 cut(s) | 401, 819, 1325, 1430, 1689, 2228, 2691, 2919, 3323 |
| BfmI | CTRYAG | 4 cut(s) | 503, 1392, 2776, 3435 |
| BfrI | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| BfuAI | ACCTGC | 1 cut(s) | 1993 |
| BfuI | GTATCC | 1 cut(s) | 1087 |
| BglII | AGATCT | 2 cut(s) | 1597, 3044 |
| BmcAI | AGTACT | 1 cut(s) | 95 |
| Bme1390I | CCNGG | 2 cut(s) | 2660, 3400 |
| Bme18I | GGWCC | 5 cut(s) | 728, 959, 1286, 3186, 3587 |
| BmeT110I | CYCGRG | 1 cut(s) | 2171 |
| BmgT120I | GGNCC | 9 cut(s) | 728, 959, 1286, 2655, 2656, 2915, 3186, 3285, 3587 |
| BmiI | GGNNCC | 7 cut(s) | 207, 960, 1288, 1470, 2656, 2657, 3553 |
| BmrFI | CCNGG | 2 cut(s) | 2660, 3400 |
| BmrI | ACTGGG | 3 cut(s) | 1701, 2446, 2922 |
| BmuI | ACTGGG | 3 cut(s) | 1701, 2446, 2922 |
| BpiI | GAAGAC | 4 cut(s) | 336, 1179, 2363, 2529 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3233, 3265 |
| BpmI | CTGGAG | 1 cut(s) | 2747 |
| Bpu10I | CCTNAGC | 2 cut(s) | 122, 3377 |
| Bpu14I | TTCGAA | 1 cut(s) | 1423 |
| BpuEI | CTTGAG | 4 cut(s) | 758, 2880, 3117, 3374 |
| Bsa29I | ATCGAT | 1 cut(s) | 2628 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1769, 3213 |
| BsaI | GGTCTC | 1 cut(s) | 3397 |
| BsaJI | CCNNGG | 4 cut(s) | 1464, 2658, 3173, 3420 |
| BsaWI | WCCGGW | 2 cut(s) | 69, 1979 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1219, 1249 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1208, 3683 |
| Bse118I | RCCGGY | 3 cut(s) | 1979, 3194, 3554 |
| Bse21I | CCTNAGG | 1 cut(s) | 732 |
| Bse3DI | GCAATG | 3 cut(s) | 992, 1290, 3108 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1769, 3213 |
| BseBI | CCWGG | 2 cut(s) | 2660, 3400 |
| BseCI | ATCGAT | 1 cut(s) | 2628 |
| BseDI | CCNNGG | 4 cut(s) | 1464, 2658, 3173, 3420 |
| BseJI | GATNNNNATC | 2 cut(s) | 1769, 3213 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1208, 3683 |
| BseMI | GCAATG | 3 cut(s) | 992, 1290, 3108 |
| BseMII | CTCAG | 5 cut(s) | 559, 1169, 1769, 2379, 3194 |
| BseRI | GAGGAG | 1 cut(s) | 759 |
| BseSI | GKGCMC | 1 cut(s) | 2659 |
| BseYI | CCCAGC | 3 cut(s) | 515, 609, 867 |
| BsgI | GTGCAG | 3 cut(s) | 470, 1233, 3100 |
| BshFI | GGCC | 4 cut(s) | 2412, 2657, 2917, 3287 |
| BshNI | GGYRCC | 2 cut(s) | 205, 3551 |
| BshTI | ACCGGT | 1 cut(s) | 1979 |
| BshVI | ATCGAT | 1 cut(s) | 2628 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2178, 2544 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2171 |
| BsiSI | CCGG | 4 cut(s) | 70, 1980, 3195, 3555 |
| BslFI | GGGAC | 1 cut(s) | 1003 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1208, 3683 |
| BsmAI | GTCTC | 5 cut(s) | 741, 776, 1892, 3254, 3397 |
| BsmBI | CGTCTC | 1 cut(s) | 3254 |
| BsmFI | GGGAC | 1 cut(s) | 1003 |
| BsmI | GAATGC | 4 cut(s) | 1431, 1883, 2375, 3671 |
| BsnI | GGCC | 4 cut(s) | 2412, 2657, 2917, 3287 |
| Bso31I | GGTCTC | 1 cut(s) | 3397 |
| BsoBI | CYCGRG | 1 cut(s) | 2171 |
| Bsp119I | TTCGAA | 1 cut(s) | 1423 |
| Bsp120I | GGGCCC | 1 cut(s) | 2655 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2178, 2544, 2659 |
| Bsp1407I | TGTACA | 1 cut(s) | 1494 |
| Bsp19I | CCATGG | 1 cut(s) | 3420 |
| BspACI | CCGC | 7 cut(s) | 855, 1091, 1483, 2571, 2987, 3189, 3641 |
| BspANI | GGCC | 4 cut(s) | 2412, 2657, 2917, 3287 |
| BspCNI | CTCAG | 5 cut(s) | 558, 1168, 1768, 2380, 3195 |
| BspDI | ATCGAT | 1 cut(s) | 2628 |
| BspHI | TCATGA | 3 cut(s) | 574, 1030, 2548 |
| BspLI | GGNNCC | 7 cut(s) | 207, 960, 1288, 1470, 2656, 2657, 3553 |
| BspMAI | CTGCAG | 2 cut(s) | 1396, 3439 |
| BspMI | ACCTGC | 1 cut(s) | 1993 |
| BspQI | GCTCTTC | 1 cut(s) | 3505 |
| BspT104I | TTCGAA | 1 cut(s) | 1423 |
| BspT107I | GGYRCC | 2 cut(s) | 205, 3551 |
| BspTI | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| BspTNI | GGTCTC | 1 cut(s) | 3397 |
| BsrDI | GCAATG | 3 cut(s) | 992, 1290, 3108 |
| BsrFI | RCCGGY | 3 cut(s) | 1979, 3194, 3554 |
| BsrGI | TGTACA | 1 cut(s) | 1494 |
| BssAI | RCCGGY | 3 cut(s) | 1979, 3194, 3554 |
| BssECI | CCNNGG | 4 cut(s) | 1464, 2658, 3173, 3420 |
| BssT1I | CCWWGG | 2 cut(s) | 1464, 3420 |
| Bst2UI | CCWGG | 2 cut(s) | 2660, 3400 |
| Bst4CI | ACNGT | 6 cut(s) | 1127, 1919, 2447, 2777, 2981, 3110 |
| Bst6I | CTCTTC | 7 cut(s) | 45, 795, 2354, 2935, 3176, 3309, 3505 |
| BstAFI | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 96, 2370 |
| BstAUI | TGTACA | 1 cut(s) | 1494 |
| BstBI | TTCGAA | 1 cut(s) | 1423 |
| BstC8I | GCNNGC | 5 cut(s) | 1483, 2147, 2826, 3196, 3200 |
| BstDSI | CCRYGG | 1 cut(s) | 3420 |
| BstHHI | GCGC | 2 cut(s) | 2889, 2994 |
| BstMAI | GTCTC | 5 cut(s) | 741, 776, 1892, 3254, 3397 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 96, 289, 2370, 2851, 3154, 3619, 3668 |
| BstNI | CCWGG | 2 cut(s) | 2660, 3400 |
| BstNSI | RCATGY | 6 cut(s) | 720, 1653, 1748, 2149, 3202, 3515 |
| BstSCI | CCNGG | 2 cut(s) | 2658, 3398 |
| BstSFI | CTRYAG | 4 cut(s) | 503, 1392, 2776, 3435 |
| BstSLI | GKGCMC | 1 cut(s) | 2659 |
| BstV2I | GAAGAC | 4 cut(s) | 336, 1179, 2363, 2529 |
| BstX2I | RGATCY | 5 cut(s) | 1597, 2743, 3044, 3214, 3424 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 617, 3421 |
| BstYI | RGATCY | 5 cut(s) | 1597, 2743, 3044, 3214, 3424 |
| Bsu15I | ATCGAT | 1 cut(s) | 2628 |
| Bsu36I | CCTNAGG | 1 cut(s) | 732 |
| BsuI | GTATCC | 1 cut(s) | 1087 |
| BsuRI | GGCC | 4 cut(s) | 2412, 2657, 2917, 3287 |
| BsuTUI | ATCGAT | 1 cut(s) | 2628 |
| BtgI | CCRYGG | 1 cut(s) | 3420 |
| BtsI | GCAGTG | 2 cut(s) | 220, 261 |
| BveI | ACCTGC | 1 cut(s) | 1993 |
| Cac8I | GCNNGC | 5 cut(s) | 1483, 2147, 2826, 3196, 3200 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2989, 3539 |
| CciI | TCATGA | 3 cut(s) | 574, 1030, 2548 |
| CfoI | GCGC | 2 cut(s) | 2889, 2994 |
| Cfr10I | RCCGGY | 3 cut(s) | 1979, 3194, 3554 |
| Cfr13I | GGNCC | 9 cut(s) | 728, 959, 1286, 2655, 2656, 2915, 3186, 3285, 3587 |
| ClaI | ATCGAT | 1 cut(s) | 2628 |
| CseI | GACGC | 1 cut(s) | 3271 |
| Csp6I | GTAC | 7 cut(s) | 94, 206, 458, 1495, 2124, 2601, 3713 |
| CspAI | ACCGGT | 1 cut(s) | 1979 |
| CviQI | GTAC | 7 cut(s) | 94, 206, 458, 1495, 2124, 2601, 3713 |
| DraI | TTTAAA | 2 cut(s) | 166, 249 |
| DraIII | CACNNNGTG | 1 cut(s) | 2519 |
| EaeI | YGGCCR | 1 cut(s) | 2410 |
| Eam1104I | CTCTTC | 7 cut(s) | 45, 795, 2354, 2935, 3176, 3309, 3505 |
| EarI | CTCTTC | 7 cut(s) | 45, 795, 2354, 2935, 3176, 3309, 3505 |
| EciI | GGCGGA | 1 cut(s) | 3656 |
| Ecl136II | GAGCTC | 1 cut(s) | 2176 |
| Eco130I | CCWWGG | 2 cut(s) | 1464, 3420 |
| Eco24I | GRGCYC | 2 cut(s) | 2178, 2659 |
| Eco31I | GGTCTC | 1 cut(s) | 3397 |
| Eco32I | GATATC | 1 cut(s) | 1852 |
| Eco47I | GGWCC | 5 cut(s) | 728, 959, 1286, 3186, 3587 |
| Eco53kI | GAGCTC | 1 cut(s) | 2176 |
| Eco57I | CTGAAG | 4 cut(s) | 1251, 1252, 3001, 3561 |
| Eco81I | CCTNAGG | 1 cut(s) | 732 |
| Eco88I | CYCGRG | 1 cut(s) | 2171 |
| EcoICRI | GAGCTC | 1 cut(s) | 2176 |
| EcoO109I | RGGNCCY | 2 cut(s) | 728, 2655 |
| EcoRII | CCWGG | 2 cut(s) | 2658, 3398 |
| EcoRV | GATATC | 1 cut(s) | 1852 |
| EcoT14I | CCWWGG | 2 cut(s) | 1464, 3420 |
| EcoT22I | ATGCAT | 2 cut(s) | 1351, 2147 |
| EcoT38I | GRGCYC | 2 cut(s) | 2178, 2659 |
| ErhI | CCWWGG | 2 cut(s) | 1464, 3420 |
| Esp3I | CGTCTC | 1 cut(s) | 3254 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 83, 115, 881, 913 |
| FaqI | GGGAC | 1 cut(s) | 1003 |
| FauI | CCCGC | 1 cut(s) | 1490 |
| FauNDI | CATATG | 1 cut(s) | 2260 |
| FriOI | GRGCYC | 2 cut(s) | 2178, 2659 |
| FspBI | CTAG | 9 cut(s) | 401, 819, 1325, 1430, 1689, 2228, 2691, 2919, 3323 |
| FspI | TGCGCA | 1 cut(s) | 2993 |
| GlaI | GCGC | 2 cut(s) | 2888, 2993 |
| GsaI | CCCAGC | 3 cut(s) | 519, 613, 871 |
| GsuI | CTGGAG | 1 cut(s) | 2747 |
| HaeIII | GGCC | 4 cut(s) | 2412, 2657, 2917, 3287 |
| HapII | CCGG | 4 cut(s) | 70, 1980, 3195, 3555 |
| HgaI | GACGC | 1 cut(s) | 3271 |
| HhaI | GCGC | 2 cut(s) | 2889, 2994 |
| Hin6I | GCGC | 2 cut(s) | 2887, 2992 |
| HinP1I | GCGC | 2 cut(s) | 2887, 2992 |
| HincII | GTYRAC | 1 cut(s) | 3490 |
| HindII | GTYRAC | 1 cut(s) | 3490 |
| HindIII | AAGCTT | 2 cut(s) | 2843, 3146 |
| HpaII | CCGG | 4 cut(s) | 70, 1980, 3195, 3555 |
| HphI | GGTGA | 6 cut(s) | 1286, 1793, 1973, 1994, 2531, 3122 |
| Hpy166II | GTNNAC | 5 cut(s) | 426, 1042, 1286, 1784, 3490 |
| Hpy8I | GTNNAC | 5 cut(s) | 426, 1042, 1286, 1784, 3490 |
| HpyCH4III | ACNGT | 6 cut(s) | 1127, 1919, 2447, 2777, 2981, 3110 |
| HpyCH4IV | ACGT | 1 cut(s) | 353 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 96, 289, 2370, 2851, 3154, 3619, 3668 |
| HpySE526I | ACGT | 1 cut(s) | 353 |
| HspAI | GCGC | 2 cut(s) | 2887, 2992 |
| KpnI | GGTACC | 1 cut(s) | 209 |
| KroI | GCCGGC | 1 cut(s) | 3194 |
| KroNI | GCCGGC | 1 cut(s) | 3196 |
| LguI | GCTCTTC | 1 cut(s) | 3505 |
| LmnI | GCTCC | 2 cut(s) | 1240, 1468 |
| MaeI | CTAG | 9 cut(s) | 401, 819, 1325, 1430, 1689, 2228, 2691, 2919, 3323 |
| MaeII | ACGT | 1 cut(s) | 353 |
| MaeIII | GTNAC | 7 cut(s) | 77, 359, 1061, 1162, 1804, 2468, 3318 |
| MfeI | CAATTG | 1 cut(s) | 285 |
| MflI | RGATCY | 5 cut(s) | 1597, 2743, 3044, 3214, 3424 |
| MhlI | GDGCHC | 3 cut(s) | 2178, 2544, 2659 |
| MlsI | TGGCCA | 1 cut(s) | 2412 |
| MluNI | TGGCCA | 1 cut(s) | 2412 |
| MlyI | GAGTC | 6 cut(s) | 1319, 1525, 2353, 3015, 3218, 3242 |
| MmeI | TCCRAC | 3 cut(s) | 1345, 2862, 3330 |
| Mox20I | TGGCCA | 1 cut(s) | 2412 |
| Mph1103I | ATGCAT | 2 cut(s) | 1351, 2147 |
| MroNI | GCCGGC | 1 cut(s) | 3194 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1026, 1641 |
| MscI | TGGCCA | 1 cut(s) | 2412 |
| MslI | CAYNNNNRTG | 4 cut(s) | 579, 683, 1248, 2248 |
| Msp20I | TGGCCA | 1 cut(s) | 2412 |
| MspA1I | CMGCKG | 4 cut(s) | 454, 1397, 2571, 2989 |
| MspCI | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| MspI | CCGG | 4 cut(s) | 70, 1980, 3195, 3555 |
| MspR9I | CCNGG | 2 cut(s) | 2660, 3400 |
| MunI | CAATTG | 1 cut(s) | 285 |
| Mva1269I | GAATGC | 4 cut(s) | 1431, 1883, 2375, 3671 |
| MvaI | CCWGG | 2 cut(s) | 2660, 3400 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 96, 289, 2370, 2851, 3154, 3619, 3668 |
| NaeI | GCCGGC | 1 cut(s) | 3196 |
| NcoI | CCATGG | 1 cut(s) | 3420 |
| NdeI | CATATG | 1 cut(s) | 2260 |
| NgoMIV | GCCGGC | 1 cut(s) | 3194 |
| NlaIV | GGNNCC | 7 cut(s) | 207, 960, 1288, 1470, 2656, 2657, 3553 |
| NmuCI | GTSAC | 3 cut(s) | 359, 1804, 2468 |
| NsbI | TGCGCA | 1 cut(s) | 2993 |
| NsiI | ATGCAT | 2 cut(s) | 1351, 2147 |
| NspI | RCATGY | 6 cut(s) | 720, 1653, 1748, 2149, 3202, 3515 |
| NspV | TTCGAA | 1 cut(s) | 1423 |
| PaeI | GCATGC | 2 cut(s) | 2149, 3202 |
| PaeR7I | CTCGAG | 1 cut(s) | 2171 |
| PagI | TCATGA | 3 cut(s) | 574, 1030, 2548 |
| PciSI | GCTCTTC | 1 cut(s) | 3505 |
| PctI | GAATGC | 4 cut(s) | 1431, 1883, 2375, 3671 |
| PdiI | GCCGGC | 1 cut(s) | 3196 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1026, 1641 |
| PfeI | GAWTC | 9 cut(s) | 151, 623, 1420, 1985, 2900, 2972, 3306, 3359, 3644 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3683 |
| PinAI | ACCGGT | 1 cut(s) | 1979 |
| PleI | GAGTC | 6 cut(s) | 1318, 1525, 2353, 3014, 3218, 3242 |
| PpsI | GAGTC | 6 cut(s) | 1318, 1525, 2353, 3014, 3218, 3242 |
| PpuMI | RGGWCCY | 1 cut(s) | 728 |
| PshBI | ATTAAT | 3 cut(s) | 2382, 2958, 3275 |
| PsiI | TTATAA | 2 cut(s) | 1617, 2106 |
| Psp124BI | GAGCTC | 1 cut(s) | 2178 |
| Psp5II | RGGWCCY | 1 cut(s) | 728 |
| Psp6I | CCWGG | 2 cut(s) | 2658, 3398 |
| PspFI | CCCAGC | 3 cut(s) | 515, 609, 867 |
| PspGI | CCWGG | 2 cut(s) | 2658, 3398 |
| PspN4I | GGNNCC | 7 cut(s) | 207, 960, 1288, 1470, 2656, 2657, 3553 |
| PspOMI | GGGCCC | 1 cut(s) | 2655 |
| PspPI | GGNCC | 9 cut(s) | 728, 959, 1286, 2655, 2656, 2915, 3186, 3285, 3587 |
| PspPPI | RGGWCCY | 1 cut(s) | 728 |
| PspXI | VCTCGAGB | 1 cut(s) | 2171 |
| PstI | CTGCAG | 2 cut(s) | 1396, 3439 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2989, 3539 |
| PsuI | RGATCY | 5 cut(s) | 1597, 2743, 3044, 3214, 3424 |
| PvuII | CAGCTG | 2 cut(s) | 454, 1397 |
| RsaI | GTAC | 7 cut(s) | 95, 207, 459, 1496, 2125, 2602, 3714 |
| RsaNI | GTAC | 7 cut(s) | 94, 206, 458, 1495, 2124, 2601, 3713 |
| RseI | CAYNNNNRTG | 4 cut(s) | 579, 683, 1248, 2248 |
| SacI | GAGCTC | 1 cut(s) | 2178 |
| SapI | GCTCTTC | 1 cut(s) | 3505 |
| Sau96I | GGNCC | 9 cut(s) | 728, 959, 1286, 2655, 2656, 2915, 3186, 3285, 3587 |
| ScaI | AGTACT | 1 cut(s) | 95 |
| SchI | GAGTC | 6 cut(s) | 1319, 1525, 2353, 3015, 3218, 3242 |
| ScrFI | CCNGG | 2 cut(s) | 2660, 3400 |
| SduI | GDGCHC | 3 cut(s) | 2178, 2544, 2659 |
| SfcI | CTRYAG | 4 cut(s) | 503, 1392, 2776, 3435 |
| Sfr274I | CTCGAG | 1 cut(s) | 2171 |
| SfuI | TTCGAA | 1 cut(s) | 1423 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1979 |
| SinI | GGWCC | 5 cut(s) | 728, 959, 1286, 3186, 3587 |
| SlaI | CTCGAG | 1 cut(s) | 2171 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 579, 683, 1248, 2248 |
| SmlI | CTYRAG | 8 cut(s) | 773, 1442, 2096, 2171, 2895, 3132, 3149, 3389 |
| SmoI | CTYRAG | 8 cut(s) | 773, 1442, 2096, 2171, 2895, 3132, 3149, 3389 |
| SpeI | ACTAGT | 1 cut(s) | 1324 |
| SphI | GCATGC | 2 cut(s) | 2149, 3202 |
| SsiI | CCGC | 7 cut(s) | 855, 1091, 1483, 2571, 2987, 3189, 3641 |
| SspMI | CTAG | 9 cut(s) | 401, 819, 1325, 1430, 1689, 2228, 2691, 2919, 3323 |
| SstI | GAGCTC | 1 cut(s) | 2178 |
| StyD4I | CCNGG | 2 cut(s) | 2658, 3398 |
| StyI | CCWWGG | 2 cut(s) | 1464, 3420 |
| TaaI | ACNGT | 6 cut(s) | 1127, 1919, 2447, 2777, 2981, 3110 |
| TaiI | ACGT | 1 cut(s) | 356 |
| TaqI | TCGA | 3 cut(s) | 1423, 2172, 2628 |
| TatI | WGTACW | 3 cut(s) | 93, 1494, 2123 |
| TauI | GCSGC | 1 cut(s) | 2989 |
| TfiI | GAWTC | 9 cut(s) | 151, 623, 1420, 1985, 2900, 2972, 3306, 3359, 3644 |
| TseFI | GTSAC | 3 cut(s) | 359, 1804, 2468 |
| Tsp45I | GTSAC | 3 cut(s) | 359, 1804, 2468 |
| TspGWI | ACGGA | 1 cut(s) | 443 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3683 |
| Vha464I | CTTAAG | 3 cut(s) | 1442, 2096, 3149 |
| VpaK11BI | GGWCC | 5 cut(s) | 728, 959, 1286, 3186, 3587 |
| VspI | ATTAAT | 3 cut(s) | 2382, 2958, 3275 |
| XbaI | TCTAGA | 2 cut(s) | 818, 2690 |
| XceI | RCATGY | 6 cut(s) | 720, 1653, 1748, 2149, 3202, 3515 |
| XhoI | CTCGAG | 1 cut(s) | 2171 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1026, 1641 |
| XspI | CTAG | 9 cut(s) | 401, 819, 1325, 1430, 1689, 2228, 2691, 2919, 3323 |
| ZrmI | AGTACT | 1 cut(s) | 95 |
| Zsp2I | ATGCAT | 2 cut(s) | 1351, 2147 |