RLG00000026369

Protein timeless homolog

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
2447670 .. 2451763
4094 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026369

Sequence Viewer

Length: 1521 bp
ATGAACTCAAGCATAGTAGGCAAGCCATTGGATTCCTGGCCACATCAAAAACCCGAAAAGACTCTTCATGAAATAAGCCACGACCTGTGCTCAGTTACATTGTTTGACCGGCAAATGCTGATTTCAGCTTTGGACCTGTGTCAATATCTATCTCTAAGCTACTTGGATTGCTTCCCTTCGGCCTATGACATACCTGTTTCTAAGAAGTCAAGGAAGGGGAGGAAGAGGAGAAAACTGAGTGAGAAGGAAACAGAAAATAAGCTCTCAGGAGAGCATGATACAGTTCAGAAAGAAACTGACATCTCCAATGGTGAACAAGCAACAGATATGAGTGTAACTGAGAAGAGAAGCCTAGACACAAGTTCTAATGGGAAACCAGACGTCAGCATCCCTGGCCAACCTGATGAAGGCAAAAACTCTTTGTTGGAGGCAGAAAACTTCCCGGGCAGTCTGGCACAGTTAGATCACAAAAATTCTGGTGATGCGAATGGTGATCTTTGTTATAGTACAGGTGACTCCTCTGGTGATGAGGAAGTAGCTGCAACTGCCGAAGTTGATTTTAAGGTGTCAAGCTTGGTTTCTGCTTTTTTAAACAACAGCATCATCCAGAAATTGTGTTGGTTGCTTAAGTTCTATAAGAGTAACTTGACCAGAACAAATCACTCCATAGTATGCATGTTGCGAAGGATCAGTGAAGACCTGGAGCTCTCTCCAATGCTGTATCAGACTTGCAAAGATTGTTATTACATTAATGCTGAATATTTATTGCATGAGCTTGGCCAATTGAGGAATGAAAGTAGAAACTGGGGAGATACTATAGAGGATGGAGATATGGGTCGATCAATGGAGAAGGGATGGACAGGTAGAAGTTTAGCAGATGCACTTGGTGAAGATGATGCTGATGTGCTCGATTTTGGACATAACAACAATGAAGAAAATCTTGGAAAAATGAAAGGGGATGCTGCATCTACTTCAAATAATGATATTGATGGGAAAGAAGATTATGATAAAAGGGCTCCTCTTAAAAAGAAAAGACTTGTTATTGGAGAGGAACTGGAGATGTTTAAGGATCTGTATGAGAATCACCTTTTTGCTGAAGCTCTTGATCCTGATGGGAAAATTTCATCAACTCAAATTTCCAACAAGCGTAAGCAGCTTGGACTCAAAGTTGCACGAAGGAAAAGATTGCGCCATGCACAGGAATCTGTTTCTGCTGAGCCTAGTCAAACTGTTGGAGATGGAGAAGTAGAGGAAACAATTATTACTCATCACGAATCAAAAACTCGGCCTTTGAACACAAGAAAAAGAGTCCATGGCTTAAGCGAAGAACAGGAAGCTCAAATTAGATCACTTTATTATCAGTTTAAAGACCATAAAAGTTGCAACCACATGATTGCCACTGCAATGGATGGGGATGATAAATTGACAGCTCCTCAAGTTTACGAAGCAGCTTGGGTTATATATTCCTCGGAAGAAGAGGTCTGGAGCCAACATGCTGATGAGGGATCAGGACCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

507

Amino Acids

56.82

Weight (kDa)

5.21

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 384
AclWI GGATC 4 cut(s) 695, 1077, 1100, 1513
AcoI YGGCCR 3 cut(s) 38, 394, 778
AcsI RAATTY 3 cut(s) 472, 1119, 1134
AcuI CTGAAG 1 cut(s) 1116
AcyI GRCGYC 1 cut(s) 381
AdeI CACNNNGTG 1 cut(s) 887
AfaI GTAC 1 cut(s) 508
AfiI CCNNNNNNNGG 2 cut(s) 407, 1198
AflII CTTAAG 2 cut(s) 626, 1318
AgsI TTSAA 2 cut(s) 975, 1294
AjnI CCWGG 3 cut(s) 35, 391, 699
AjuI GAANNNNNNNTTGG 2 cut(s) 924, 956
Alw21I GWGCWC 3 cut(s) 92, 708, 909
AlwI GGATC 4 cut(s) 695, 1077, 1100, 1513
Ama87I CYCGRG 1 cut(s) 442
AoxI GGCC 5 cut(s) 38, 180, 394, 778, 1286
ApeKI GCWGC 4 cut(s) 539, 962, 1153, 1448
ApoI RAATTY 3 cut(s) 472, 1119, 1134
AseI ATTAAT 1 cut(s) 750
AspLEI GCGC 1 cut(s) 1191
AspS9I GGNCC 2 cut(s) 133, 1511
AsuC2I CCSGG 2 cut(s) 443, 444
AsuHPI GGTGA 7 cut(s) 323, 491, 503, 524, 536, 899, 1076
AvaI CYCGRG 1 cut(s) 442
AvaII GGWCC 2 cut(s) 133, 1511
BalI TGGCCA 3 cut(s) 40, 396, 780
BanII GRGCYC 2 cut(s) 708, 1018
BbsI GAAGAC 1 cut(s) 702
Bbv12I GWGCWC 3 cut(s) 92, 708, 909
BbvI GCAGC 4 cut(s) 526, 949, 1165, 1460
BccI CCATC 6 cut(s) 818, 849, 983, 1106, 1232, 1403
BciT130I CCWGG 3 cut(s) 37, 393, 701
BcnI CCSGG 2 cut(s) 443, 444
BfaI CTAG 2 cut(s) 353, 1221
BfmI CTRYAG 1 cut(s) 816
BfrI CTTAAG 2 cut(s) 626, 1318
BisI GCNGC 4 cut(s) 540, 963, 1154, 1449
BlpI GCTNAGC 1 cut(s) 1215
BlsI GCNGC 4 cut(s) 541, 964, 1155, 1450
Bme1390I CCNGG 5 cut(s) 37, 393, 443, 444, 701
Bme18I GGWCC 2 cut(s) 133, 1511
BmeT110I CYCGRG 1 cut(s) 442
BmgT120I GGNCC 2 cut(s) 133, 1511
BmiI GGNNCC 2 cut(s) 1017, 1487
BmrFI CCNGG 5 cut(s) 37, 393, 443, 444, 701
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 7 cut(s) 396, 472, 609, 868, 886, 949, 974
BmuI ACTGGG 1 cut(s) 814
BoxI GACNNNNGTC 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 702
BpmI CTGGAG 3 cut(s) 722, 1076, 1504
Bpu1102I GCTNAGC 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 1419
BpuMI CCSGG 2 cut(s) 443, 444
BsaHI GRCGYC 1 cut(s) 381
BsaJI CCNNGG 4 cut(s) 391, 442, 1312, 1467
Bsc4I CCNNNNNNNGG 2 cut(s) 407, 1198
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 2 cut(s) 809, 1059
Bse3DI GCAATG 1 cut(s) 1410
BseBI CCWGG 3 cut(s) 37, 393, 701
BseDI CCNNGG 4 cut(s) 391, 442, 1312, 1467
BseGI GGATG 7 cut(s) 387, 603, 829, 860, 964, 1414, 1420
BseLI CCNNNNNNNGG 2 cut(s) 407, 1198
BseMI GCAATG 1 cut(s) 1410
BseMII CTCAG 5 cut(s) 105, 227, 279, 330, 1206
BseNI ACTGG 2 cut(s) 809, 1059
BseRI GAGGAG 4 cut(s) 241, 508, 1008, 1422
BseXI GCAGC 4 cut(s) 526, 949, 1165, 1460
BshFI GGCC 5 cut(s) 40, 182, 396, 780, 1288
BsiHKAI GWGCWC 3 cut(s) 92, 708, 909
BsiHKCI CYCGRG 1 cut(s) 442
BsiSI CCGG 2 cut(s) 109, 443
BslI CCNNNNNNNGG 2 cut(s) 407, 1198
BsnI GGCC 5 cut(s) 40, 182, 396, 780, 1288
BsoBI CYCGRG 1 cut(s) 442
Bsp1286I GDGCHC 4 cut(s) 92, 708, 909, 1018
Bsp143I GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
Bsp1720I GCTNAGC 1 cut(s) 1215
Bsp19I CCATGG 1 cut(s) 1312
BspANI GGCC 5 cut(s) 40, 182, 396, 780, 1288
BspCNI CTCAG 5 cut(s) 104, 228, 278, 331, 1207
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 2 cut(s) 1017, 1487
BspPI GGATC 4 cut(s) 695, 1077, 1100, 1513
BspTI CTTAAG 2 cut(s) 626, 1318
BsrDI GCAATG 1 cut(s) 1410
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 2 cut(s) 809, 1059
BssAI RCCGGY 1 cut(s) 108
BssECI CCNNGG 4 cut(s) 391, 442, 1312, 1467
BssMI GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
BssNI GRCGYC 1 cut(s) 381
BssT1I CCWWGG 1 cut(s) 1312
Bst2UI CCWGG 3 cut(s) 37, 393, 701
Bst4CI ACNGT 3 cut(s) 283, 459, 1231
Bst6I CTCTTC 4 cut(s) 69, 218, 338, 1470
BstACI GRCGYC 1 cut(s) 381
BstAFI CTTAAG 2 cut(s) 626, 1318
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 7 cut(s) 91, 155, 201, 236, 265, 339, 1215
BstDSI CCRYGG 1 cut(s) 1312
BstENI CCTNNNNNAGG 1 cut(s) 405
BstF5I GGATG 7 cut(s) 387, 603, 829, 860, 964, 1414, 1420
BstHHI GCGC 1 cut(s) 1191
BstKTI GATC 8 cut(s) 466, 496, 690, 842, 1072, 1108, 1349, 1508
BstMBI GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
BstMWI GCNNNNNNNGC 4 cut(s) 18, 393, 545, 1153
BstNI CCWGG 3 cut(s) 37, 393, 701
BstNSI RCATGY 2 cut(s) 679, 1496
BstPAI GACNNNNGTC 1 cut(s) 138
BstSCI CCNGG 5 cut(s) 35, 391, 441, 442, 699
BstSFI CTRYAG 1 cut(s) 816
BstV1I GCAGC 4 cut(s) 526, 949, 1165, 1460
BstV2I GAAGAC 1 cut(s) 702
BstX2I RGATCY 1 cut(s) 1069
BstXI CCANNNNNNTGG 1 cut(s) 1405
BstYI RGATCY 1 cut(s) 1069
BsuRI GGCC 5 cut(s) 40, 182, 396, 780, 1288
BtgI CCRYGG 1 cut(s) 1312
BtsCI GGATG 7 cut(s) 387, 603, 829, 860, 964, 1414, 1420
BtsI GCAGTG 1 cut(s) 1398
BtsIMutI CAGTG 2 cut(s) 697, 1398
Cac8I GCNNGC 1 cut(s) 23
CciI TCATGA 1 cut(s) 67
CfoI GCGC 1 cut(s) 1191
Cfr10I RCCGGY 1 cut(s) 108
Cfr13I GGNCC 2 cut(s) 133, 1511
Cfr9I CCCGGG 1 cut(s) 442
Csp6I GTAC 1 cut(s) 507
CviAII CATG 8 cut(s) 68, 275, 676, 770, 1193, 1313, 1390, 1493
CviQI GTAC 1 cut(s) 507
DdeI CTNAG 7 cut(s) 91, 155, 201, 236, 265, 339, 1215
DpnI GATC 8 cut(s) 465, 495, 689, 841, 1071, 1107, 1348, 1507
DpnII GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
DraI TTTAAA 2 cut(s) 591, 1366
DraIII CACNNNGTG 1 cut(s) 887
EaeI YGGCCR 3 cut(s) 38, 394, 778
Eam1104I CTCTTC 4 cut(s) 69, 218, 338, 1470
EarI CTCTTC 4 cut(s) 69, 218, 338, 1470
Ecl136II GAGCTC 1 cut(s) 706
Eco130I CCWWGG 1 cut(s) 1312
Eco24I GRGCYC 2 cut(s) 708, 1018
Eco47I GGWCC 2 cut(s) 133, 1511
Eco53kI GAGCTC 1 cut(s) 706
Eco57I CTGAAG 1 cut(s) 1116
Eco88I CYCGRG 1 cut(s) 442
EcoICRI GAGCTC 1 cut(s) 706
EcoNI CCTNNNNNAGG 1 cut(s) 405
EcoO109I RGGNCCY 1 cut(s) 1511
EcoRII CCWGG 3 cut(s) 35, 391, 699
EcoT14I CCWWGG 1 cut(s) 1312
EcoT22I ATGCAT 1 cut(s) 677
EcoT38I GRGCYC 2 cut(s) 708, 1018
ErhI CCWWGG 1 cut(s) 1312
FaeI CATG 8 cut(s) 71, 278, 679, 773, 1196, 1316, 1393, 1496
FalI AAGNNNNNCTT 4 cut(s) 629, 661, 924, 956
FatI CATG 8 cut(s) 67, 274, 675, 769, 1192, 1312, 1389, 1492
Fnu4HI GCNGC 4 cut(s) 540, 963, 1154, 1449
FokI GGATG 7 cut(s) 374, 590, 836, 867, 971, 1421, 1427
FriOI GRGCYC 2 cut(s) 708, 1018
Fsp4HI GCNGC 4 cut(s) 540, 963, 1154, 1449
FspBI CTAG 2 cut(s) 353, 1221
GlaI GCGC 1 cut(s) 1190
GluI GCNGC 4 cut(s) 540, 963, 1154, 1449
GsuI CTGGAG 3 cut(s) 722, 1076, 1504
HaeIII GGCC 5 cut(s) 40, 182, 396, 780, 1288
HapII CCGG 2 cut(s) 109, 443
HhaI GCGC 1 cut(s) 1191
Hin1I GRCGYC 1 cut(s) 381
Hin1II CATG 8 cut(s) 71, 278, 679, 773, 1196, 1316, 1393, 1496
Hin6I GCGC 1 cut(s) 1189
HinP1I GCGC 1 cut(s) 1189
HindIII AAGCTT 1 cut(s) 571
HinfI GANTC 8 cut(s) 32, 61, 515, 1081, 1161, 1202, 1274, 1308
HpaII CCGG 2 cut(s) 109, 443
HphI GGTGA 7 cut(s) 323, 491, 503, 524, 536, 899, 1076
Hpy166II GTNNAC 2 cut(s) 314, 1441
Hpy188I TCNGA 3 cut(s) 288, 726, 1471
Hpy188III TCNNGA 8 cut(s) 68, 267, 607, 1103, 1109, 1271, 1483, 1509
Hpy8I GTNNAC 2 cut(s) 314, 1441
HpyAV CCTTC 7 cut(s) 186, 208, 238, 401, 678, 844, 1170
HpyCH4III ACNGT 3 cut(s) 283, 459, 1231
HpyCH4IV ACGT 1 cut(s) 381
HpyF10VI GCNNNNNNNGC 4 cut(s) 18, 393, 545, 1153
HpyF3I CTNAG 7 cut(s) 91, 155, 201, 236, 265, 339, 1215
HpySE526I ACGT 1 cut(s) 381
Hsp92I GRCGYC 1 cut(s) 381
Hsp92II CATG 8 cut(s) 71, 278, 679, 773, 1196, 1316, 1393, 1496
HspAI GCGC 1 cut(s) 1189
Kzo9I GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
LmnI GCTCC 4 cut(s) 703, 1021, 1435, 1485
Lsp1109I GCAGC 4 cut(s) 526, 949, 1165, 1460
LweI GCATC 7 cut(s) 396, 472, 609, 868, 886, 949, 974
MaeI CTAG 2 cut(s) 353, 1221
MaeII ACGT 1 cut(s) 381
MaeIII GTNAC 4 cut(s) 94, 334, 512, 641
MalI GATC 8 cut(s) 465, 495, 689, 841, 1071, 1107, 1348, 1507
MboI GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 1 cut(s) 1069
MhlI GDGCHC 4 cut(s) 92, 708, 909, 1018
MlsI TGGCCA 3 cut(s) 40, 396, 780
MluCI AATT 8 cut(s) 472, 611, 782, 1119, 1134, 1257, 1341, 1421
MluNI TGGCCA 3 cut(s) 40, 396, 780
MlyI GAGTC 4 cut(s) 55, 509, 1155, 1317
MmeI TCCRAC 3 cut(s) 405, 1164, 1213
Mox20I TGGCCA 3 cut(s) 40, 396, 780
Mph1103I ATGCAT 1 cut(s) 677
MscI TGGCCA 3 cut(s) 40, 396, 780
MseI TTAA 8 cut(s) 561, 590, 627, 750, 1023, 1065, 1319, 1365
MslI CAYNNNNRTG 2 cut(s) 1403, 1497
Msp20I TGGCCA 3 cut(s) 40, 396, 780
MspCI CTTAAG 2 cut(s) 626, 1318
MspI CCGG 2 cut(s) 109, 443
MspR9I CCNGG 5 cut(s) 37, 393, 443, 444, 701
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 3 cut(s) 37, 393, 701
MwoI GCNNNNNNNGC 4 cut(s) 18, 393, 545, 1153
NciI CCSGG 2 cut(s) 443, 444
NcoI CCATGG 1 cut(s) 1312
NdeII GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
NlaIII CATG 8 cut(s) 71, 278, 679, 773, 1196, 1316, 1393, 1496
NlaIV GGNNCC 2 cut(s) 1017, 1487
NmeAIII GCCGAG 1 cut(s) 1264
NmuCI GTSAC 1 cut(s) 512
NsiI ATGCAT 1 cut(s) 677
NspI RCATGY 2 cut(s) 679, 1496
PagI TCATGA 1 cut(s) 67
PfeI GAWTC 4 cut(s) 32, 1081, 1202, 1274
PkrI GCNGC 4 cut(s) 541, 964, 1155, 1450
PleI GAGTC 4 cut(s) 55, 509, 1155, 1316
PpsI GAGTC 4 cut(s) 55, 509, 1155, 1316
PpuMI RGGWCCY 1 cut(s) 1511
PshAI GACNNNNGTC 1 cut(s) 138
PshBI ATTAAT 1 cut(s) 750
Psp124BI GAGCTC 1 cut(s) 708
Psp5II RGGWCCY 1 cut(s) 1511
Psp6I CCWGG 3 cut(s) 35, 391, 699
PspGI CCWGG 3 cut(s) 35, 391, 699
PspN4I GGNNCC 2 cut(s) 1017, 1487
PspPI GGNCC 2 cut(s) 133, 1511
PspPPI RGGWCCY 1 cut(s) 1511
PsuI RGATCY 1 cut(s) 1069
RsaI GTAC 1 cut(s) 508
RsaNI GTAC 1 cut(s) 507
RseI CAYNNNNRTG 2 cut(s) 1403, 1497
SacI GAGCTC 1 cut(s) 708
SaqAI TTAA 8 cut(s) 561, 590, 627, 750, 1023, 1065, 1319, 1365
SatI GCNGC 4 cut(s) 540, 963, 1154, 1449
Sau3AI GATC 8 cut(s) 463, 493, 687, 839, 1069, 1105, 1346, 1505
Sau96I GGNCC 2 cut(s) 133, 1511
SchI GAGTC 4 cut(s) 55, 509, 1155, 1317
ScrFI CCNGG 5 cut(s) 37, 393, 443, 444, 701
SduI GDGCHC 4 cut(s) 92, 708, 909, 1018
SfaNI GCATC 7 cut(s) 396, 472, 609, 868, 886, 949, 974
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 2 cut(s) 133, 1511
SmaI CCCGGG 1 cut(s) 444
SmiMI CAYNNNNRTG 2 cut(s) 1403, 1497
SmlI CTYRAG 4 cut(s) 7, 626, 1318, 1434
SmoI CTYRAG 4 cut(s) 7, 626, 1318, 1434
Sse9I AATT 8 cut(s) 472, 611, 782, 1119, 1134, 1257, 1341, 1421
SspI AATATT 1 cut(s) 761
SspMI CTAG 2 cut(s) 353, 1221
SstI GAGCTC 1 cut(s) 708
StyD4I CCNGG 5 cut(s) 35, 391, 441, 442, 699
StyI CCWWGG 1 cut(s) 1312
TaaI ACNGT 3 cut(s) 283, 459, 1231
TaiI ACGT 1 cut(s) 384
TaqI TCGA 2 cut(s) 838, 909
TasI AATT 8 cut(s) 472, 611, 782, 1119, 1134, 1257, 1341, 1421
TatI WGTACW 1 cut(s) 506
TfiI GAWTC 4 cut(s) 32, 1081, 1202, 1274
Tru1I TTAA 8 cut(s) 561, 590, 627, 750, 1023, 1065, 1319, 1365
Tru9I TTAA 8 cut(s) 561, 590, 627, 750, 1023, 1065, 1319, 1365
TscAI CASTG 2 cut(s) 697, 1405
TseFI GTSAC 1 cut(s) 512
TseI GCWGC 4 cut(s) 539, 962, 1153, 1448
Tsp45I GTSAC 1 cut(s) 512
TspDTI ATGAA 8 cut(s) 17, 56, 84, 420, 807, 945, 965, 1113
TspMI CCCGGG 1 cut(s) 442
TspRI CASTG 2 cut(s) 697, 1405
Vha464I CTTAAG 2 cut(s) 626, 1318
VpaK11BI GGWCC 2 cut(s) 133, 1511
VspI ATTAAT 1 cut(s) 750
XagI CCTNNNNNAGG 1 cut(s) 405
XapI RAATTY 3 cut(s) 472, 1119, 1134
XceI RCATGY 2 cut(s) 679, 1496
XcmI CCANNNNNNNNNTGG 1 cut(s) 33
XmaI CCCGGG 1 cut(s) 442
XspI CTAG 2 cut(s) 353, 1221
ZraI GACGTC 1 cut(s) 382
Zsp2I ATGCAT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.