Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0011044

Physical Location & Seq

Genomic Coordinates Reverse (-)

29942301 .. 29944387

Gene Structure 2087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G322900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 726 bp

ATGGCCACAACTCTTCGTTGCCCTCAAGCAGTAGCACCACTTCCATGGAGGGCGAGAAGGCCCAACAACAGCAGAGGCACAATCCCAATGGGGCCCCGCCAGGTGTCGAACATCCGGGCCTTCGGGCGAAGCGACATCGGAAGCTTCGCGAGGGACGCGTGGCGGAGCGCCAACGACGGATTCGAGCGGTTCCTATTCGAGGCCAAGAAGACGGCGGAGCGCTTGGACCGCCGATACGCCCTTTCGCACCGCTTCGACACCATCGCTCAGTCCGCCGCCGCTCGCGCCCGTGAAATTGACAGAGACCTCGAGATTGGGACTCGCTGGCGCGCCTTTAGCATGGATTTTAGCAGAAATTTGCCTAGGTACAGGAAGCAGCTTAATGATTTCCTGGAAACCCCATTGGGAAGAAGTTTTGCGACAATCTTCTTCCTGTGGTTTGCATTATCCGGATGGCTTTTTCGGTTATTGATATTCGCTACATGGGTACTGCCATTTGCTGCTCCTCTGGTCATTGGAGCGGTTGCCAATAACCTTGTTATTAAGGGGGCTTGTCCAGCTTGCAAGAGGCAATTTGTTGGTTACAAGAACCAAGTAATTCGTTGTGCAAGCTGCGGAAACACTGTGTGGCAGCCAAAAGGGGACTTCTTTTCAAGAGATGGTAGAGGTCCGTCTTCGTCGAAATCAGAACCGGAGATTATTGATGTTGAGTTTGAAGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

242

Amino Acids

27.45

Weight (kDa)

10.39

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44870
fragaria_vesca	FvH4_7g33420
malus_domestica	MD01G1232400.v1.1 MD07G1304300.v1.1
prunus_persica	Prupe.2G322900_v2.0.a1 Prupe.2G322900_v2.0.a1 Prupe.2G322900_v2.0.a1
pyrus_communis	pycom01g24090
rosa_chinensis	RchiOBHm_Chr1g0383391
rosa_laevigata	RLG00000026105
rosa_multiflora	Rmu_co8439237.1_g000001 Rmu_sc0007173.1_g000010 Rmu_sc0012471.1_g000027
rosa_roxburghii	Rroxscaffold_4G00277330
rosa_rugosa	Rorug01G0441200
rosa_samantha	Rh1AG467000 Rh1BG424300 Rh1CG437400 Rh1DG457000
rosa_wichuraiana	Rw1G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	3 cut(s)	187, 281, 521
AccII	CGCG	4 cut(s)	149, 158, 285, 330
AccIII	TCCGGA	1 cut(s)	449
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	355
AdeI	CACNNNGTG	1 cut(s)	627
AfaI	GTAC	2 cut(s)	368, 489
AfeI	AGCGCT	1 cut(s)	221
AfiI	CCNNNNNNNGG	1 cut(s)	199
AflIII	ACRYGT	1 cut(s)	156
AgsI	TTSAA	2 cut(s)	654, 716
AjnI	CCWGG	2 cut(s)	99, 390
AjuI	GAANNNNNNNTTGG	2 cut(s)	164, 196
AluBI	AGCT	4 cut(s)	144, 379, 560, 612
AluI	AGCT	4 cut(s)	144, 379, 560, 612
Alw26I	GTCTC	1 cut(s)	297
Ama87I	CYCGRG	1 cut(s)	308
Aor13HI	TCCGGA	1 cut(s)	449
Aor51HI	AGCGCT	1 cut(s)	221
AoxI	GGCC	5 cut(s)	3, 59, 92, 117, 201
ApaI	GGGCCC	1 cut(s)	96
ApeKI	GCWGC	4 cut(s)	376, 500, 612, 631
ApoI	RAATTY	1 cut(s)	355
AscI	GGCGCGCC	1 cut(s)	328
AspA2I	CCTAGG	1 cut(s)	362
AspLEI	GCGC	5 cut(s)	170, 222, 287, 330, 332
AspS9I	GGNCC	6 cut(s)	60, 92, 93, 117, 226, 668
AsuC2I	CCSGG	1 cut(s)	116
AvaI	CYCGRG	1 cut(s)	308
AvaII	GGWCC	2 cut(s)	226, 668
AvrII	CCTAGG	1 cut(s)	362
BaeGI	GKGCMC	1 cut(s)	96
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	96
BarI	GAAGNNNNNNTAC	2 cut(s)	24, 56
BbsI	GAAGAC	2 cut(s)	215, 666
BbvI	GCAGC	4 cut(s)	388, 487, 599, 643
BccI	CCATC	3 cut(s)	269, 447, 653
BceAI	ACGGC	1 cut(s)	228
BciT130I	CCWGG	2 cut(s)	101, 392
BcnI	CCSGG	1 cut(s)	116
BcoDI	GTCTC	1 cut(s)	297
BfaI	CTAG	1 cut(s)	363
BfoI	RGCGCY	2 cut(s)	171, 223
BisI	GCNGC	6 cut(s)	276, 279, 377, 501, 613, 632
BlnI	CCTAGG	1 cut(s)	362
BlsI	GCNGC	6 cut(s)	277, 280, 378, 502, 614, 633
Bme1390I	CCNGG	3 cut(s)	101, 116, 392
Bme18I	GGWCC	2 cut(s)	226, 668
BmeT110I	CYCGRG	1 cut(s)	308
BmgT120I	GGNCC	6 cut(s)	60, 92, 93, 117, 226, 668
BmiI	GGNNCC	4 cut(s)	93, 94, 95, 191
BmrFI	CCNGG	3 cut(s)	101, 116, 392
BpiI	GAAGAC	2 cut(s)	215, 666
BpuEI	CTTGAG	1 cut(s)	9
BpuMI	CCSGG	1 cut(s)	116
BsaI	GGTCTC	1 cut(s)	297
BsaJI	CCNNGG	2 cut(s)	44, 362
BsaWI	WCCGGW	2 cut(s)	449, 691
Bsc4I	CCNNNNNNNGG	1 cut(s)	199
BseAI	TCCGGA	1 cut(s)	449
BseBI	CCWGG	2 cut(s)	101, 392
BseDI	CCNNGG	2 cut(s)	44, 362
BseGI	GGATG	2 cut(s)	111, 458
BseLI	CCNNNNNNNGG	1 cut(s)	199
BseMII	CTCAG	1 cut(s)	281
BsePI	GCGCGC	1 cut(s)	328
BseRI	GAGGAG	1 cut(s)	495
BseSI	GKGCMC	1 cut(s)	96
BseXI	GCAGC	4 cut(s)	388, 487, 599, 643
Bsh1236I	CGCG	4 cut(s)	149, 158, 285, 330
BshFI	GGCC	5 cut(s)	5, 61, 94, 119, 203
BsiHKCI	CYCGRG	1 cut(s)	308
BsiSI	CCGG	3 cut(s)	115, 450, 692
BslFI	GGGAC	3 cut(s)	167, 331, 656
BslI	CCNNNNNNNGG	1 cut(s)	199
BsmAI	GTCTC	1 cut(s)	297
BsmFI	GGGAC	3 cut(s)	167, 331, 656
BsnI	GGCC	5 cut(s)	5, 61, 94, 119, 203
Bso31I	GGTCTC	1 cut(s)	297
BsoBI	CYCGRG	1 cut(s)	308
Bsp120I	GGGCCC	1 cut(s)	92
Bsp1286I	GDGCHC	1 cut(s)	96
Bsp13I	TCCGGA	1 cut(s)	449
Bsp19I	CCATGG	1 cut(s)	44
Bsp68I	TCGCGA	1 cut(s)	149
BspANI	GGCC	5 cut(s)	5, 61, 94, 119, 203
BspCNI	CTCAG	1 cut(s)	280
BspEI	TCCGGA	1 cut(s)	449
BspFNI	CGCG	4 cut(s)	149, 158, 285, 330
BspLI	GGNNCC	4 cut(s)	93, 94, 95, 191
BspTNI	GGTCTC	1 cut(s)	297
BsrBI	CCGCTC	3 cut(s)	187, 281, 521
BssECI	CCNNGG	2 cut(s)	44, 362
BssHII	GCGCGC	1 cut(s)	328
BssT1I	CCWWGG	2 cut(s)	44, 362
Bst2UI	CCWGG	2 cut(s)	101, 392
Bst4CI	ACNGT	1 cut(s)	625
Bst6I	CTCTTC	2 cut(s)	18, 711
BstC8I	GCNNGC	5 cut(s)	283, 326, 330, 562, 610
BstDEI	CTNAG	1 cut(s)	267
BstDSI	CCRYGG	1 cut(s)	44
BstENI	CCTNNNNNAGG	1 cut(s)	197
BstF5I	GGATG	2 cut(s)	111, 458
BstFNI	CGCG	4 cut(s)	149, 158, 285, 330
BstH2I	RGCGCY	2 cut(s)	171, 223
BstHHI	GCGC	5 cut(s)	170, 222, 287, 330, 332
BstMAI	GTCTC	1 cut(s)	297
BstMWI	GCNNNNNNNGC	6 cut(s)	155, 228, 272, 284, 336, 557
BstNI	CCWGG	2 cut(s)	101, 392
BstSCI	CCNGG	3 cut(s)	99, 114, 390
BstSLI	GKGCMC	1 cut(s)	96
BstUI	CGCG	4 cut(s)	149, 158, 285, 330
BstV1I	GCAGC	4 cut(s)	388, 487, 599, 643
BstV2I	GAAGAC	2 cut(s)	215, 666
BstXI	CCANNNNNNTGG	1 cut(s)	45
BsuRI	GGCC	5 cut(s)	5, 61, 94, 119, 203
BtgI	CCRYGG	1 cut(s)	44
BtgZI	GCGATG	1 cut(s)	247
BtsCI	GGATG	2 cut(s)	111, 458
BtsIMutI	CAGTG	1 cut(s)	621
BtuMI	TCGCGA	1 cut(s)	149
Cac8I	GCNNGC	5 cut(s)	283, 326, 330, 562, 610
CfoI	GCGC	5 cut(s)	170, 222, 287, 330, 332
Cfr13I	GGNCC	6 cut(s)	60, 92, 93, 117, 226, 668
CseI	GACGC	1 cut(s)	164
Csp6I	GTAC	2 cut(s)	367, 488
CviAII	CATG	3 cut(s)	45, 340, 483
CviQI	GTAC	2 cut(s)	367, 488
DdeI	CTNAG	1 cut(s)	267
DraIII	CACNNNGTG	1 cut(s)	627
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	18, 711
EarI	CTCTTC	2 cut(s)	18, 711
EciI	GGCGGA	3 cut(s)	178, 230, 262
Eco130I	CCWWGG	2 cut(s)	44, 362
Eco24I	GRGCYC	1 cut(s)	96
Eco31I	GGTCTC	1 cut(s)	297
Eco47I	GGWCC	2 cut(s)	226, 668
Eco47III	AGCGCT	1 cut(s)	221
Eco88I	CYCGRG	1 cut(s)	308
EcoNI	CCTNNNNNAGG	1 cut(s)	197
EcoO109I	RGGNCCY	2 cut(s)	92, 93
EcoRII	CCWGG	2 cut(s)	99, 390
EcoT14I	CCWWGG	2 cut(s)	44, 362
EcoT38I	GRGCYC	1 cut(s)	96
ErhI	CCWWGG	2 cut(s)	44, 362
FaeI	CATG	3 cut(s)	48, 343, 486
FaiI	YATR	3 cut(s)	46, 341, 484
FaqI	GGGAC	3 cut(s)	167, 331, 656
FatI	CATG	3 cut(s)	44, 339, 482
FauI	CCCGC	1 cut(s)	104
Fnu4HI	GCNGC	6 cut(s)	276, 279, 377, 501, 613, 632
FokI	GGATG	2 cut(s)	98, 465
FriOI	GRGCYC	1 cut(s)	96
Fsp4HI	GCNGC	6 cut(s)	276, 279, 377, 501, 613, 632
FspBI	CTAG	1 cut(s)	363
GlaI	GCGC	5 cut(s)	169, 221, 286, 329, 331
GluI	GCNGC	6 cut(s)	276, 279, 377, 501, 613, 632
HaeII	RGCGCY	2 cut(s)	171, 223
HaeIII	GGCC	5 cut(s)	5, 61, 94, 119, 203
HapII	CCGG	3 cut(s)	115, 450, 692
HgaI	GACGC	1 cut(s)	164
HhaI	GCGC	5 cut(s)	170, 222, 287, 330, 332
Hin1II	CATG	3 cut(s)	48, 343, 486
Hin6I	GCGC	5 cut(s)	168, 220, 285, 328, 330
HinP1I	GCGC	5 cut(s)	168, 220, 285, 328, 330
HindIII	AAGCTT	1 cut(s)	142
HinfI	GANTC	2 cut(s)	180, 319
HpaII	CCGG	3 cut(s)	115, 450, 692
Hpy188I	TCNGA	2 cut(s)	140, 688
Hpy188III	TCNNGA	4 cut(s)	148, 310, 450, 654
Hpy99I	CGWCG	2 cut(s)	179, 682
HpyAV	CCTTC	2 cut(s)	51, 130
HpyCH4III	ACNGT	1 cut(s)	625
HpyCH4V	TGCA	3 cut(s)	443, 564, 608
HpyF10VI	GCNNNNNNNGC	6 cut(s)	155, 228, 272, 284, 336, 557
HpyF3I	CTNAG	1 cut(s)	267
Hsp92II	CATG	3 cut(s)	48, 343, 486
HspAI	GCGC	5 cut(s)	168, 220, 285, 328, 330
Kpn2I	TCCGGA	1 cut(s)	449
LmnI	GCTCC	4 cut(s)	165, 217, 508, 518
Lsp1109I	GCAGC	4 cut(s)	388, 487, 599, 643
MaeI	CTAG	1 cut(s)	363
MaeIII	GTNAC	1 cut(s)	581
MbiI	CCGCTC	3 cut(s)	187, 281, 521
MboII	GAAGA	6 cut(s)	5, 220, 418, 420, 421, 666
MhlI	GDGCHC	1 cut(s)	96
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	4 cut(s)	294, 355, 572, 597
MluI	ACGCGT	1 cut(s)	156
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	313
MnlI	CCTC	9 cut(s)	33, 42, 68, 144, 193, 317, 516, 561, 659
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	449
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	381, 543
MslI	CAYNNNNRTG	1 cut(s)	43
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	3 cut(s)	115, 450, 692
MspR9I	CCNGG	3 cut(s)	101, 116, 392
MvaI	CCWGG	2 cut(s)	101, 392
MvnI	CGCG	4 cut(s)	149, 158, 285, 330
MwoI	GCNNNNNNNGC	6 cut(s)	155, 228, 272, 284, 336, 557
NciI	CCSGG	1 cut(s)	116
NcoI	CCATGG	1 cut(s)	44
NlaIII	CATG	3 cut(s)	48, 343, 486
NlaIV	GGNNCC	4 cut(s)	93, 94, 95, 191
NruI	TCGCGA	1 cut(s)	149
PaeR7I	CTCGAG	1 cut(s)	308
PalAI	GGCGCGCC	1 cut(s)	328
PauI	GCGCGC	1 cut(s)	328
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 180
PfeI	GAWTC	1 cut(s)	180
PfoI	TCCNGGA	1 cut(s)	390
PkrI	GCNGC	6 cut(s)	277, 280, 378, 502, 614, 633
PleI	GAGTC	1 cut(s)	313
PpsI	GAGTC	1 cut(s)	313
Psp6I	CCWGG	2 cut(s)	99, 390
PspGI	CCWGG	2 cut(s)	99, 390
PspN4I	GGNNCC	4 cut(s)	93, 94, 95, 191
PspOMI	GGGCCC	1 cut(s)	92
PspPI	GGNCC	6 cut(s)	60, 92, 93, 117, 226, 668
PteI	GCGCGC	1 cut(s)	328
RruI	TCGCGA	1 cut(s)	149
RsaI	GTAC	2 cut(s)	368, 489
RsaNI	GTAC	2 cut(s)	367, 488
RseI	CAYNNNNRTG	1 cut(s)	43
SaqAI	TTAA	2 cut(s)	381, 543
SatI	GCNGC	6 cut(s)	276, 279, 377, 501, 613, 632
Sau96I	GGNCC	6 cut(s)	60, 92, 93, 117, 226, 668
SchI	GAGTC	1 cut(s)	313
ScrFI	CCNGG	3 cut(s)	101, 116, 392
SduI	GDGCHC	1 cut(s)	96
SetI	ASST	9 cut(s)	105, 146, 309, 368, 381, 537, 562, 614, 670
Sfr274I	CTCGAG	1 cut(s)	308
SgsI	GGCGCGCC	1 cut(s)	328
SinI	GGWCC	2 cut(s)	226, 668
SlaI	CTCGAG	1 cut(s)	308
SmiMI	CAYNNNNRTG	1 cut(s)	43
SmlI	CTYRAG	2 cut(s)	24, 308
SmoI	CTYRAG	2 cut(s)	24, 308
Sse9I	AATT	4 cut(s)	294, 355, 572, 597
SspMI	CTAG	1 cut(s)	363
StyD4I	CCNGG	3 cut(s)	99, 114, 390
StyI	CCWWGG	2 cut(s)	44, 362
TaaI	ACNGT	1 cut(s)	625
TaqI	TCGA	6 cut(s)	107, 183, 198, 255, 309, 680
TasI	AATT	4 cut(s)	294, 355, 572, 597
TauI	GCSGC	2 cut(s)	278, 281
TfiI	GAWTC	1 cut(s)	180
Tru1I	TTAA	2 cut(s)	381, 543
Tru9I	TTAA	2 cut(s)	381, 543
TscAI	CASTG	1 cut(s)	628
TseI	GCWGC	4 cut(s)	376, 500, 612, 631
TspGWI	ACGGA	2 cut(s)	192, 660
TspRI	CASTG	1 cut(s)	628
VpaK11BI	GGWCC	2 cut(s)	226, 668
XagI	CCTNNNNNAGG	1 cut(s)	197
XapI	RAATTY	1 cut(s)	355
XhoI	CTCGAG	1 cut(s)	308
XmaJI	CCTAGG	1 cut(s)	362
XspI	CTAG	1 cut(s)	363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.