Prupe.3G002400_v2.0.a1

Belongs to the DHHC palmitoyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
166542 .. 169686
3145 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G002400.2

Sequence Viewer

Length: 1524 bp
ATGAATAGGAGACGCCATGGCTGGCAACGCCCTTTCCACCCTTTGCAGATTGTGGGAATTGCAGTTTACAGTTTTCTTGTGGTGTCCTTCTATACATTCTTTGGACTTTTCCTGGGAAACAGAATAGCCGAAATCACAGTCACCACAATCTTTTCCTTTGTGGCTGTTTCAGTCATGTTCCTGTTCATAAGGTGCACAGCCACTGACCCAACTGACAAAACCAGCCTTAGGAAGAAGAAACCTAAAGCTCGCAAAGGCTATCCAAAGCTCAATTACGGGTTCATTTTGGGGCAGATTATAGTGAGGTTCTTTAGAAGAATGGAGAGAAAGATCCTCAGGACTTTCATAAGGAGGAGGTATCTCGATCCGTGGAAGACCGGCGCTCAGTTGGATCCATTGCTCCCATTTCCCTTTGTCCTCATGAAAGAAGACGCGGTCTCTCCCGATTTAAGGGAAGACGACATCTCCTTCTGCGCACTCTGCGATTTTGAGGTGAAAAAACACAGCAAACACTGCAGGACCTGCAACCGTTGTGTTGATGGCTTTGATCACCACTGCAGGTGGTTAAACAACTGCGTCGGGAAAAAGAATTACACCACATTTATTCTCCTCATGATTTTCGTTCTGTTATTGCTAATCATAGAAGGAGCAACTGCAATTGCAATATTCATCAGGTGCTTCGTAGATAAAAATGGAATAGAGCAGGAGCTGAAGAGGAAACTCTACGTAGACTTCCCAAGAGGCGTTCTTGCAACGATATCGGTCTTGCTAACTTTAATGATAGCTTATGGTTCAGCAGCAATGGGACAGCTTTTTTTCTTTCATGTGGTTCTAATACGGAAGGGAATGAGAACATATGACTATATCCTGGCAATGAAAGAGGAGAGCCAATCTATAGAAATGGATCCATTTGATGATTCAGATTTCTCCTCAGACTTGAGTAGTGATTTTGATTCACCTGAAAAGCCATCATTCATATCACGGTTTATATGCAGAGGACGAGGGGTAACTCAGTTTCAGAACACCAGAAGGCTGTCCATAAGAATTGACGGAGATCCTCAGCCGTCCACCTCAACAGTGAAACAAGGCTTCCGTGTCAGCATTGACCCGTGGAGACTGATAAAGTTGAGCAAGGAGAAAGCACTGATAGCAGCAGAGAAGGCCAGAGAAAGGATTGTGAAACAGAAGCCTCCTACAGAAGAGGATCCACTGAAACCACTACCATTGGAGACAAAATGTGGACCACTCACAGATAAAAACACGGCCACAGCAGGATCAGGCTTAACACCTCTTATATCCAAAGGGTGGATGCCAGGGTCACCCGGAAGGTTTCCAAGCCCAAGAAGGCGGTTTTCTGGTTCATCAACAATGTTCTCTGGCATTGTACCATCGCCACAGCAAAAGTACAGAAACAATTTTGACTTGAAATTGACAGAGGTGTCCAGAGAGCTGGAGACCTACATCTCAAGGCAGGTTCTATGTTCTGTTATAAAGAAGGACGGTACTGAGGCATCCCCAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

508

Amino Acids

58.08

Weight (kDa)

9.76

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011254)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1490
AarI CACCTGC 1 cut(s) 549
AasI GACNNNNNNGTC 1 cut(s) 1438
Acc16I TGCGCA 1 cut(s) 475
Acc36I ACCTGC 3 cut(s) 530, 549, 1462
AccB7I CCANNNNNTGG 1 cut(s) 1305
AccI GTMKAC 1 cut(s) 729
AccII CGCG 1 cut(s) 434
AciI CCGC 2 cut(s) 434, 1348
AcoI YGGCCR 1 cut(s) 1263
AcuI CTGAAG 1 cut(s) 731
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 3 cut(s) 1386, 1406, 1504
AfiI CCNNNNNNNGG 4 cut(s) 228, 450, 1170, 1305
AgsI TTSAA 1 cut(s) 1426
AjnI CCWGG 3 cut(s) 111, 867, 1312
AluBI AGCT 6 cut(s) 248, 268, 709, 785, 811, 1450
AluI AGCT 6 cut(s) 248, 268, 709, 785, 811, 1450
Alw21I GWGCWC 1 cut(s) 197
Alw26I GTCTC 5 cut(s) 4, 442, 1108, 1223, 1448
Alw44I GTGCAC 1 cut(s) 193
AlwNI CAGNNNCTG 3 cut(s) 203, 522, 709
AoxI GGCC 2 cut(s) 1161, 1263
ApaLI GTGCAC 1 cut(s) 193
ApeKI GCWGC 2 cut(s) 797, 1151
ArsI GACNNNNNNTTYG 2 cut(s) 123, 155
AspLEI GCGC 2 cut(s) 383, 476
AspS9I GGNCC 2 cut(s) 519, 1241
AsuC2I CCSGG 1 cut(s) 1323
AsuHPI GGTGA 5 cut(s) 133, 505, 542, 948, 1311
AvaII GGWCC 2 cut(s) 519, 1241
AxyI CCTNAGG 2 cut(s) 227, 335
BaeGI GKGCMC 1 cut(s) 197
BamHI GGATCC 3 cut(s) 391, 904, 1204
BbsI GAAGAC 3 cut(s) 380, 435, 462
Bbv12I GWGCWC 1 cut(s) 197
BbvCI CCTCAGC 1 cut(s) 1059
BbvI GCAGC 2 cut(s) 809, 1163
BccI CCATC 3 cut(s) 533, 976, 1396
BceAI ACGGC 2 cut(s) 1048, 1278
BcgI CGANNNNNNTGC 2 cut(s) 741, 775
BciT130I CCWGG 3 cut(s) 113, 869, 1314
BclI TGATCA 1 cut(s) 547
BcnI CCSGG 1 cut(s) 1323
BcoDI GTCTC 5 cut(s) 4, 442, 1108, 1223, 1448
BfmI CTRYAG 4 cut(s) 514, 556, 894, 1194
BfoI RGCGCY 1 cut(s) 384
BfuAI ACCTGC 3 cut(s) 530, 549, 1462
BisI GCNGC 2 cut(s) 798, 1152
BlsI GCNGC 2 cut(s) 799, 1153
Bme1390I CCNGG 4 cut(s) 113, 869, 1314, 1323
Bme18I GGWCC 2 cut(s) 519, 1241
BmgT120I GGNCC 2 cut(s) 519, 1241
BmiI GGNNCC 3 cut(s) 393, 906, 1206
BmrFI CCNGG 4 cut(s) 113, 869, 1314, 1323
BmsI GCATC 2 cut(s) 1299, 1520
BpiI GAAGAC 3 cut(s) 380, 435, 462
BpmI CTGGAG 1 cut(s) 1472
Bpu10I CCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 2 cut(s) 958, 1450
BpuMI CCSGG 1 cut(s) 1323
BsaAI YACGTR 1 cut(s) 727
BsaHI GRCGYC 1 cut(s) 13
BsaI GGTCTC 2 cut(s) 442, 1448
BsaJI CCNNGG 5 cut(s) 16, 112, 368, 1109, 1313
BsaXI ACNNNNNCTCC 2 cut(s) 449, 479
Bsc4I CCNNNNNNNGG 4 cut(s) 228, 450, 1170, 1305
Bse118I RCCGGY 1 cut(s) 377
Bse21I CCTNAGG 2 cut(s) 227, 335
Bse3DI GCAATG 3 cut(s) 395, 807, 879
BseBI CCWGG 3 cut(s) 113, 869, 1314
BseDI CCNNGG 5 cut(s) 16, 112, 368, 1109, 1313
BseGI GGATG 2 cut(s) 1314, 1511
BseLI CCNNNNNNNGG 4 cut(s) 228, 450, 1170, 1305
BseMI GCAATG 3 cut(s) 395, 807, 879
BseMII CTCAG 6 cut(s) 349, 398, 945, 1025, 1073, 1497
BseRI GAGGAG 4 cut(s) 367, 599, 896, 919
BseSI GKGCMC 1 cut(s) 197
BseXI GCAGC 2 cut(s) 809, 1163
Bsh1236I CGCG 1 cut(s) 434
BshFI GGCC 2 cut(s) 1163, 1265
BsiHKAI GWGCWC 1 cut(s) 197
BsiSI CCGG 2 cut(s) 378, 1323
BslFI GGGAC 1 cut(s) 819
BslI CCNNNNNNNGG 4 cut(s) 228, 450, 1170, 1305
BsmAI GTCTC 5 cut(s) 4, 442, 1108, 1223, 1448
BsmBI CGTCTC 1 cut(s) 4
BsmFI GGGAC 1 cut(s) 819
BsnI GGCC 2 cut(s) 1163, 1265
Bso31I GGTCTC 2 cut(s) 442, 1448
Bsp1286I GDGCHC 1 cut(s) 197
Bsp143I GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
Bsp19I CCATGG 1 cut(s) 16
BspACI CCGC 2 cut(s) 434, 1348
BspANI GGCC 2 cut(s) 1163, 1265
BspCNI CTCAG 6 cut(s) 348, 397, 944, 1024, 1072, 1498
BspFNI CGCG 1 cut(s) 434
BspHI TCATGA 2 cut(s) 420, 612
BspLI GGNNCC 3 cut(s) 393, 906, 1206
BspMAI CTGCAG 2 cut(s) 518, 560
BspMI ACCTGC 3 cut(s) 530, 549, 1462
BspTNI GGTCTC 2 cut(s) 442, 1448
BsrDI GCAATG 3 cut(s) 395, 807, 879
BsrFI RCCGGY 1 cut(s) 377
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 5 cut(s) 16, 112, 368, 1109, 1313
BssMI GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
BssNI GRCGYC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 16
Bst2UI CCWGG 3 cut(s) 113, 869, 1314
Bst4CI ACNGT 6 cut(s) 71, 139, 530, 984, 1078, 1502
Bst6I CTCTTC 2 cut(s) 707, 1194
BstACI GRCGYC 1 cut(s) 13
BstAPI GCANNNNNTGC 2 cut(s) 513, 522
BstBAI YACGTR 1 cut(s) 727
BstC8I GCNNGC 2 cut(s) 23, 250
BstDEI CTNAG 7 cut(s) 227, 335, 384, 931, 1011, 1059, 1506
BstDSI CCRYGG 3 cut(s) 16, 368, 1109
BstEII GGTNACC 1 cut(s) 1317
BstF5I GGATG 2 cut(s) 1314, 1511
BstFNI CGCG 1 cut(s) 434
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 2 cut(s) 383, 476
BstKTI GATC 8 cut(s) 333, 367, 394, 550, 907, 1057, 1207, 1277
BstMAI GTCTC 5 cut(s) 4, 442, 1108, 1223, 1448
BstMBI GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
BstMWI GCNNNNNNNGC 6 cut(s) 27, 480, 513, 522, 1148, 1160
BstNI CCWGG 3 cut(s) 113, 869, 1314
BstPI GGTNACC 1 cut(s) 1317
BstSCI CCNGG 4 cut(s) 111, 867, 1312, 1321
BstSFI CTRYAG 4 cut(s) 514, 556, 894, 1194
BstSLI GKGCMC 1 cut(s) 197
BstSNI TACGTA 1 cut(s) 727
BstUI CGCG 1 cut(s) 434
BstV1I GCAGC 2 cut(s) 809, 1163
BstV2I GAAGAC 3 cut(s) 380, 435, 462
BstX2I RGATCY 5 cut(s) 330, 391, 904, 1054, 1204
BstXI CCANNNNNNTGG 1 cut(s) 1450
BstYI RGATCY 5 cut(s) 330, 391, 904, 1054, 1204
Bsu36I CCTNAGG 2 cut(s) 227, 335
BsuRI GGCC 2 cut(s) 1163, 1265
BtgI CCRYGG 3 cut(s) 16, 368, 1109
BtgZI GCGATG 1 cut(s) 1374
BtsCI GGATG 2 cut(s) 1314, 1511
BtsI GCAGTG 2 cut(s) 511, 553
BtsIMutI CAGTG 6 cut(s) 201, 511, 553, 1083, 1142, 1208
BveI ACCTGC 3 cut(s) 530, 549, 1462
Cac8I GCNNGC 2 cut(s) 23, 250
CaiI CAGNNNCTG 3 cut(s) 203, 522, 709
CciI TCATGA 2 cut(s) 420, 612
CfoI GCGC 2 cut(s) 383, 476
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 2 cut(s) 519, 1241
CseI GACGC 3 cut(s) 21, 440, 565
Csp6I GTAC 3 cut(s) 1385, 1405, 1503
CspCI CAANNNNNGTGG 2 cut(s) 1206, 1241
CviAII CATG 5 cut(s) 17, 175, 421, 613, 824
CviQI GTAC 3 cut(s) 1385, 1405, 1503
DdeI CTNAG 7 cut(s) 227, 335, 384, 931, 1011, 1059, 1506
DpnI GATC 8 cut(s) 332, 366, 393, 549, 906, 1056, 1206, 1276
DpnII GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
DrdI GACNNNNNNGTC 1 cut(s) 1438
DseDI GACNNNNNNGTC 1 cut(s) 1438
EaeI YGGCCR 1 cut(s) 1263
Eam1104I CTCTTC 2 cut(s) 707, 1194
EarI CTCTTC 2 cut(s) 707, 1194
Eco105I TACGTA 1 cut(s) 727
Eco130I CCWWGG 1 cut(s) 16
Eco31I GGTCTC 2 cut(s) 442, 1448
Eco32I GATATC 1 cut(s) 759
Eco47I GGWCC 2 cut(s) 519, 1241
Eco57I CTGAAG 1 cut(s) 731
Eco81I CCTNAGG 2 cut(s) 227, 335
Eco91I GGTNACC 1 cut(s) 1317
EcoO109I RGGNCCY 1 cut(s) 519
EcoO65I GGTNACC 1 cut(s) 1317
EcoRII CCWGG 3 cut(s) 111, 867, 1312
EcoRV GATATC 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 16
Esp3I CGTCTC 1 cut(s) 4
FaeI CATG 5 cut(s) 20, 178, 424, 616, 827
FaqI GGGAC 1 cut(s) 819
FatI CATG 5 cut(s) 16, 174, 420, 612, 823
FauNDI CATATG 1 cut(s) 856
FbaI TGATCA 1 cut(s) 547
FblI GTMKAC 1 cut(s) 729
Fnu4HI GCNGC 2 cut(s) 798, 1152
FokI GGATG 2 cut(s) 1321, 1498
Fsp4HI GCNGC 2 cut(s) 798, 1152
FspI TGCGCA 1 cut(s) 475
GlaI GCGC 2 cut(s) 382, 475
GluI GCNGC 2 cut(s) 798, 1152
GsuI CTGGAG 1 cut(s) 1472
HaeII RGCGCY 1 cut(s) 384
HaeIII GGCC 2 cut(s) 1163, 1265
HapII CCGG 2 cut(s) 378, 1323
HgaI GACGC 3 cut(s) 21, 440, 565
HhaI GCGC 2 cut(s) 383, 476
Hin1I GRCGYC 1 cut(s) 13
Hin1II CATG 5 cut(s) 20, 178, 424, 616, 827
Hin6I GCGC 2 cut(s) 381, 474
HinP1I GCGC 2 cut(s) 381, 474
HinfI GANTC 2 cut(s) 917, 953
HpaII CCGG 2 cut(s) 378, 1323
HphI GGTGA 5 cut(s) 133, 505, 542, 948, 1311
Hpy166II GTNNAC 5 cut(s) 67, 195, 730, 1068, 1241
Hpy188I TCNGA 3 cut(s) 922, 934, 1020
Hpy188III TCNNGA 7 cut(s) 337, 362, 421, 443, 580, 613, 1443
Hpy8I GTNNAC 5 cut(s) 67, 195, 730, 1068, 1241
Hpy99I CGWCG 1 cut(s) 581
HpyAV CCTTC 9 cut(s) 97, 478, 638, 835, 1023, 1153, 1320, 1338, 1489
HpyCH4III ACNGT 6 cut(s) 71, 139, 530, 984, 1078, 1502
HpyCH4IV ACGT 1 cut(s) 726
HpyF10VI GCNNNNNNNGC 6 cut(s) 27, 480, 513, 522, 1148, 1160
HpyF3I CTNAG 7 cut(s) 227, 335, 384, 931, 1011, 1059, 1506
HpySE526I ACGT 1 cut(s) 726
Hsp92I GRCGYC 1 cut(s) 13
Hsp92II CATG 5 cut(s) 20, 178, 424, 616, 827
HspAI GCGC 2 cut(s) 381, 474
Ksp22I TGATCA 1 cut(s) 547
Kzo9I GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
LmnI GCTCC 3 cut(s) 405, 647, 706
Lsp1109I GCAGC 2 cut(s) 809, 1163
LweI GCATC 2 cut(s) 1299, 1520
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 3 cut(s) 139, 1006, 1317
MalI GATC 8 cut(s) 332, 366, 393, 549, 906, 1056, 1206, 1276
MboI GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
MboII GAAGA 8 cut(s) 244, 247, 327, 385, 440, 467, 724, 1211
MfeI CAATTG 1 cut(s) 657
MflI RGATCY 5 cut(s) 330, 391, 904, 1054, 1204
MhlI GDGCHC 1 cut(s) 197
MluCI AATT 7 cut(s) 57, 271, 589, 657, 1044, 1414, 1427
MmeI TCCRAC 1 cut(s) 369
MseI TTAA 4 cut(s) 449, 566, 776, 1283
MspI CCGG 2 cut(s) 378, 1323
MspR9I CCNGG 4 cut(s) 113, 869, 1314, 1323
MunI CAATTG 1 cut(s) 657
MvaI CCWGG 3 cut(s) 113, 869, 1314
MvnI CGCG 1 cut(s) 434
MwoI GCNNNNNNNGC 6 cut(s) 27, 480, 513, 522, 1148, 1160
NciI CCSGG 1 cut(s) 1323
NcoI CCATGG 1 cut(s) 16
NdeI CATATG 1 cut(s) 856
NdeII GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
NlaIII CATG 5 cut(s) 20, 178, 424, 616, 827
NlaIV GGNNCC 3 cut(s) 393, 906, 1206
NmuCI GTSAC 2 cut(s) 139, 1317
NsbI TGCGCA 1 cut(s) 475
PagI TCATGA 2 cut(s) 420, 612
PaqCI CACCTGC 1 cut(s) 549
PfeI GAWTC 2 cut(s) 917, 953
PflFI GACNNNGTC 1 cut(s) 434
PflMI CCANNNNNTGG 1 cut(s) 1305
PkrI GCNGC 2 cut(s) 799, 1153
Ppu21I YACGTR 1 cut(s) 727
PpuMI RGGWCCY 1 cut(s) 519
PsiI TTATAA 1 cut(s) 1490
Psp5II RGGWCCY 1 cut(s) 519
Psp6I CCWGG 3 cut(s) 111, 867, 1312
PspEI GGTNACC 1 cut(s) 1317
PspGI CCWGG 3 cut(s) 111, 867, 1312
PspN4I GGNNCC 3 cut(s) 393, 906, 1206
PspPI GGNCC 2 cut(s) 519, 1241
PspPPI RGGWCCY 1 cut(s) 519
PstI CTGCAG 2 cut(s) 518, 560
PstNI CAGNNNCTG 3 cut(s) 203, 522, 709
PsuI RGATCY 5 cut(s) 330, 391, 904, 1054, 1204
PsyI GACNNNGTC 1 cut(s) 434
RsaI GTAC 3 cut(s) 1386, 1406, 1504
RsaNI GTAC 3 cut(s) 1385, 1405, 1503
SaqAI TTAA 4 cut(s) 449, 566, 776, 1283
SatI GCNGC 2 cut(s) 798, 1152
Sau3AI GATC 8 cut(s) 330, 364, 391, 547, 904, 1054, 1204, 1274
Sau96I GGNCC 2 cut(s) 519, 1241
ScrFI CCNGG 4 cut(s) 113, 869, 1314, 1323
SduI GDGCHC 1 cut(s) 197
SfaNI GCATC 2 cut(s) 1299, 1520
SfcI CTRYAG 4 cut(s) 514, 556, 894, 1194
SinI GGWCC 2 cut(s) 519, 1241
SmlI CTYRAG 2 cut(s) 937, 1465
SmoI CTYRAG 2 cut(s) 937, 1465
SnaBI TACGTA 1 cut(s) 727
Sse9I AATT 7 cut(s) 57, 271, 589, 657, 1044, 1414, 1427
SsiI CCGC 2 cut(s) 434, 1348
SspI AATATT 1 cut(s) 666
StyD4I CCNGG 4 cut(s) 111, 867, 1312, 1321
StyI CCWWGG 1 cut(s) 16
TaaI ACNGT 6 cut(s) 71, 139, 530, 984, 1078, 1502
TaiI ACGT 1 cut(s) 729
TaqI TCGA 1 cut(s) 363
TaqII GACCGA 1 cut(s) 751
TasI AATT 7 cut(s) 57, 271, 589, 657, 1044, 1414, 1427
TatI WGTACW 1 cut(s) 1404
TfiI GAWTC 2 cut(s) 917, 953
Tru1I TTAA 4 cut(s) 449, 566, 776, 1283
Tru9I TTAA 4 cut(s) 449, 566, 776, 1283
TscAI CASTG 6 cut(s) 208, 518, 560, 1083, 1149, 1215
TseFI GTSAC 2 cut(s) 139, 1317
TseI GCWGC 2 cut(s) 797, 1151
Tsp45I GTSAC 2 cut(s) 139, 1317
TspGWI ACGGA 4 cut(s) 357, 853, 1065, 1082
TspRI CASTG 6 cut(s) 208, 518, 560, 1083, 1149, 1215
Tth111I GACNNNGTC 1 cut(s) 434
Van91I CCANNNNNTGG 1 cut(s) 1305
VneI GTGCAC 1 cut(s) 193
VpaK11BI GGWCC 2 cut(s) 519, 1241
XmiI GTMKAC 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.