RLG00000023128

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0011254
Physical Location & Seq
Reverse (-)
18556073 .. 18558389
2317 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023128

Sequence Viewer

Length: 1578 bp
ATGATCGCTACCAGACGCCATGGCTGGCAACGCCCCTTCCACCCTTTGCAGATGGTGGGAATCGCGGTTTTTAGTTTTCTGGTGGTGACCTTCTACACATTCCTGGGACTTTTCCTGGGAAATCGAATCGCTGAGATTACAGTCACCACAGTCTTCTCCTTTGTTGCTGTTTCGGTCATGTTTCTCTTCATCCGGTGCACCGCGACGGACCCAACTGACAGAACCAGCTTCAAGAAGAAGAAGAAGAAGAAGAAAGGCTCCAGAGGAGGTGGTAAAGGGTACCCGGAACTTAATCACTGGTTCATTCTGGGGCAGATTATGGTCAGGTTCTTGAGGAGAGTGGAGAAGAAGCTTCTGAGGACTTTTATAAGGAGGAGTTATCTGGATCCATGGAAGACCAGCACTCATATGGAGCCGTTGGTTCCTTTTCCATTTGTGCTCATGAAAGACGACGACGCTGTCTCTCCAGATCTCAGAGAAGACGACATCTCGTTTTGTGTACTCTGCGACTTCGAGGTGAAAAAAACAAGCAAGCATTGCAGGACATGCAACCGGTGCGTTGAAGGCTTCGATCACCACTGCAGGTGGTTAAACAACTGTGTTGGTAAAAAGAACTACACCACATTCATTCTTCTGATGGCTTTCGTTTTGTTACTTTTGATCATAGAAGGAGGAACAGCAATTGCCATATTTGTCAGGTGCTTCACCGATAAAAATGGAATAGAGCACGAGCTGAAGAGGAAACTCTACCTAGACTTTCCAAGAGCTGTTCTTGCTACAATATCGGTCTTGCTAACTCTATTGACAGCTTATGGTTCAGCAGCAATGGGACAGCTTTTTTTCTTTCATGTAGTCCTCATCAAGAAGGGAATCAGAACATATGACTATATCCTGGCAATGAAAGAGGAGATCAACCAGTCTATGGAAATGGATCCATTTAATGATGATTCAGATTTCTCCTCAGATGAGAGCATTAGTGATTTTGATTCACCCGAAAAGCCGTCATGTGTATCAAGGTTTACATGCAGAGGACATGATGCAGGAATTCAGAATCCCAGAAGGCTGTCCATAAGAATTGATGGTGATCCTCAGCCCTCCAAGTCAACCAAGCCACAAGGTTTCCGCGTCAGCATTAATCCATGGAGGCTGATAAAGTTGAGCAAAGAGAAGGCATTGCTCGCAGCTGAGAAAGCCAGAGAAAGAATTTTGAAACAGAAGCCATCTGCAGAGCATGATTCATTGAGACCACTACCATTAGAGACGAAATCCGGACCATTGACGATGAGCACAGATAGAACCACAGCCACTGCAACTACAGCAGGATCAGGCTTTACACCTTTAATATCGAAAGGGGGGTGGATGCCAGGGTCACCCGTCTCAAAGTTTTCAAGCCCAAGAAGGAGGTTTTCTGGTTCACCAACTATGTTCACTGGCATTGTTCCCTCACCAAAGCACAAGTACAAAAGTAACTTTGACTTGAAGTTGACAGAGGTGTCCAGGGAGCTGGAGACCTATATCTCGAGGCAGGTTCTGTGTTCTGTCATAAAGAAGGATGGCAGTGAAGCATCCCCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DHHC

Protein Analysis

526

Amino Acids

59.57

Weight (kDa)

9.68

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 161 - 297 1.6e-30 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011254)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01730
fragaria_vesca FvH4_1g26210 FvH4_1g26210
malus_domestica MD09G1290600.v1.1 MD17G1285300.v1.1
prunus_persica Prupe.3G002400_v2.0.a1 Prupe.3G002400_v2.0.a1
pyrus_communis pycom09g19820 pycom17g28110
rosa_chinensis RchiOBHm_Chr3g0485751
rosa_laevigata RLG00000023128
rosa_multiflora Rmu_sc0003005.1_g000002
rosa_roxburghii Rroxscaffold_6G00396350 Rroxscaffold_6G00396370
rosa_rugosa Rorug03G0221100
rosa_samantha Rh3AG270400 Rh3BG305900 Rh3CG304300 Rh3DG300400
rosa_wichuraiana Rw3G024080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 368
AarI CACCTGC 1 cut(s) 573
AasI GACNNNNNNGTC 2 cut(s) 458, 1492
Acc36I ACCTGC 2 cut(s) 573, 1516
Acc65I GGTACC 1 cut(s) 279
AccB1I GGYRCC 1 cut(s) 279
AccB7I CCANNNNNTGG 1 cut(s) 922
AccII CGCG 3 cut(s) 65, 203, 1125
AccIII TCCGGA 1 cut(s) 1268
AciI CCGC 3 cut(s) 65, 201, 1123
AclWI GGATC 6 cut(s) 380, 393, 926, 939, 1079, 1330
AcsI RAATTY 2 cut(s) 1044, 1203
AcuI CTGAAG 1 cut(s) 755
AcyI GRCGYC 1 cut(s) 16
AfaI GTAC 3 cut(s) 281, 501, 1460
AfiI CCNNNNNNNGG 1 cut(s) 922
AgeI ACCGGT 1 cut(s) 552
AgsI TTSAA 5 cut(s) 232, 563, 1210, 1389, 1480
AjnI CCWGG 5 cut(s) 102, 114, 891, 1363, 1496
AluBI AGCT 8 cut(s) 228, 352, 733, 767, 809, 835, 1184, 1504
AluI AGCT 8 cut(s) 228, 352, 733, 767, 809, 835, 1184, 1504
Alw21I GWGCWC 4 cut(s) 200, 441, 729, 1289
Alw26I GTCTC 5 cut(s) 466, 1237, 1253, 1381, 1502
Alw44I GTGCAC 1 cut(s) 196
AlwI GGATC 6 cut(s) 380, 393, 926, 939, 1079, 1330
AlwNI CAGNNNCTG 2 cut(s) 1307, 1531
Ama87I CYCGRG 1 cut(s) 1519
Aor13HI TCCGGA 1 cut(s) 1268
ApaLI GTGCAC 1 cut(s) 196
ApeKI GCWGC 2 cut(s) 821, 1181
ApoI RAATTY 2 cut(s) 1044, 1203
AseI ATTAAT 1 cut(s) 1134
AsiGI ACCGGT 1 cut(s) 552
Asp718I GGTACC 1 cut(s) 279
AspS9I GGNCC 2 cut(s) 208, 1271
AsuC2I CCSGG 1 cut(s) 284
AvaI CYCGRG 1 cut(s) 1519
AvaII GGWCC 2 cut(s) 208, 1271
BaeGI GKGCMC 1 cut(s) 200
BamHI GGATCC 2 cut(s) 385, 931
BanI GGYRCC 1 cut(s) 279
BauI CACGAG 1 cut(s) 728
BbsI GAAGAC 3 cut(s) 145, 401, 486
Bbv12I GWGCWC 4 cut(s) 200, 441, 729, 1289
BbvCI CCTCAGC 1 cut(s) 1089
BbvI GCAGC 2 cut(s) 833, 1193
BccI CCATC 5 cut(s) 46, 631, 1073, 1228, 1547
BceAI ACGGC 2 cut(s) 400, 985
BciT130I CCWGG 5 cut(s) 104, 116, 893, 1365, 1498
BclI TGATCA 1 cut(s) 660
BcnI CCSGG 1 cut(s) 284
BcoDI GTCTC 5 cut(s) 466, 1237, 1253, 1381, 1502
BfaI CTAG 1 cut(s) 752
BfmI CTRYAG 3 cut(s) 580, 1224, 1314
BfuAI ACCTGC 2 cut(s) 573, 1516
BglII AGATCT 1 cut(s) 469
BisI GCNGC 2 cut(s) 822, 1182
BlsI GCNGC 2 cut(s) 823, 1183
Bme1390I CCNGG 6 cut(s) 104, 116, 284, 893, 1365, 1498
Bme18I GGWCC 2 cut(s) 208, 1271
BmeT110I CYCGRG 1 cut(s) 1519
BmgT120I GGNCC 2 cut(s) 208, 1271
BmiI GGNNCC 7 cut(s) 210, 259, 281, 387, 414, 423, 933
BmrFI CCNGG 6 cut(s) 104, 116, 284, 893, 1365, 1498
BmsI GCATC 3 cut(s) 1027, 1350, 1574
BpiI GAAGAC 3 cut(s) 145, 401, 486
BpmI CTGGAG 3 cut(s) 244, 450, 1526
Bpu10I CCTNAGC 1 cut(s) 1089
BpuEI CTTGAG 1 cut(s) 352
BpuMI CCSGG 1 cut(s) 284
BsaBI GATNNNNATC 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 16
BsaI GGTCTC 2 cut(s) 1237, 1502
BsaJI CCNNGG 7 cut(s) 19, 103, 115, 389, 1139, 1364, 1497
BsaWI WCCGGW 3 cut(s) 192, 552, 1268
Bsc4I CCNNNNNNNGG 1 cut(s) 922
Bse118I RCCGGY 1 cut(s) 552
Bse1I ACTGG 3 cut(s) 302, 916, 1435
Bse3DI GCAATG 4 cut(s) 535, 831, 903, 1172
Bse8I GATNNNNATC 1 cut(s) 1083
BseAI TCCGGA 1 cut(s) 1268
BseBI CCWGG 5 cut(s) 104, 116, 893, 1365, 1498
BseDI CCNNGG 7 cut(s) 19, 103, 115, 389, 1139, 1364, 1497
BseGI GGATG 4 cut(s) 189, 1365, 1558, 1565
BseJI GATNNNNATC 1 cut(s) 1083
BseLI CCNNNNNNNGG 1 cut(s) 922
BseMI GCAATG 4 cut(s) 535, 831, 903, 1172
BseMII CTCAG 6 cut(s) 123, 347, 487, 975, 1103, 1176
BseNI ACTGG 3 cut(s) 302, 916, 1435
BseRI GAGGAG 5 cut(s) 279, 349, 388, 920, 949
BseSI GKGCMC 1 cut(s) 200
BseXI GCAGC 2 cut(s) 833, 1193
Bsh1236I CGCG 3 cut(s) 65, 203, 1125
BshNI GGYRCC 1 cut(s) 279
BshTI ACCGGT 1 cut(s) 552
BsiHKAI GWGCWC 4 cut(s) 200, 441, 729, 1289
BsiHKCI CYCGRG 1 cut(s) 1519
BsiSI CCGG 4 cut(s) 193, 284, 553, 1269
BslFI GGGAC 2 cut(s) 120, 843
BslI CCNNNNNNNGG 1 cut(s) 922
BsmAI GTCTC 5 cut(s) 466, 1237, 1253, 1381, 1502
BsmBI CGTCTC 2 cut(s) 1253, 1381
BsmFI GGGAC 2 cut(s) 120, 843
Bso31I GGTCTC 2 cut(s) 1237, 1502
BsoBI CYCGRG 1 cut(s) 1519
Bsp1286I GDGCHC 4 cut(s) 200, 441, 729, 1289
Bsp13I TCCGGA 1 cut(s) 1268
Bsp143I GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
Bsp19I CCATGG 3 cut(s) 19, 389, 1139
BspACI CCGC 3 cut(s) 65, 201, 1123
BspCNI CTCAG 6 cut(s) 124, 348, 486, 974, 1102, 1177
BspEI TCCGGA 1 cut(s) 1268
BspFNI CGCG 3 cut(s) 65, 203, 1125
BspHI TCATGA 1 cut(s) 441
BspLI GGNNCC 7 cut(s) 210, 259, 281, 387, 414, 423, 933
BspMAI CTGCAG 2 cut(s) 584, 1228
BspMI ACCTGC 2 cut(s) 573, 1516
BspPI GGATC 6 cut(s) 380, 393, 926, 939, 1079, 1330
BspT107I GGYRCC 1 cut(s) 279
BspTNI GGTCTC 2 cut(s) 1237, 1502
BsrDI GCAATG 4 cut(s) 535, 831, 903, 1172
BsrFI RCCGGY 1 cut(s) 552
BsrI ACTGG 3 cut(s) 302, 916, 1435
BssAI RCCGGY 1 cut(s) 552
BssECI CCNNGG 7 cut(s) 19, 103, 115, 389, 1139, 1364, 1497
BssMI GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
BssNI GRCGYC 1 cut(s) 16
BssSI CACGAG 1 cut(s) 728
BssT1I CCWWGG 3 cut(s) 19, 389, 1139
Bst2BI CACGAG 1 cut(s) 728
Bst2UI CCWGG 5 cut(s) 104, 116, 893, 1365, 1498
Bst4CI ACNGT 3 cut(s) 142, 151, 599
Bst6I CTCTTC 2 cut(s) 191, 731
BstACI GRCGYC 1 cut(s) 16
BstAPI GCANNNNNTGC 3 cut(s) 537, 546, 555
BstC8I GCNNGC 3 cut(s) 26, 533, 1179
BstDEI CTNAG 6 cut(s) 132, 356, 473, 961, 1089, 1185
BstDSI CCRYGG 3 cut(s) 19, 389, 1139
BstEII GGTNACC 2 cut(s) 85, 1368
BstF5I GGATG 4 cut(s) 189, 1365, 1558, 1565
BstFNI CGCG 3 cut(s) 65, 203, 1125
BstKTI GATC 9 cut(s) 6, 388, 472, 574, 663, 912, 934, 1087, 1325
BstMAI GTCTC 5 cut(s) 466, 1237, 1253, 1381, 1502
BstMBI GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
BstMWI GCNNNNNNNGC 9 cut(s) 30, 537, 546, 555, 564, 773, 1178, 1190, 1316
BstNI CCWGG 5 cut(s) 104, 116, 893, 1365, 1498
BstNSI RCATGY 2 cut(s) 549, 1026
BstPI GGTNACC 2 cut(s) 85, 1368
BstSCI CCNGG 6 cut(s) 102, 114, 282, 891, 1363, 1496
BstSFI CTRYAG 3 cut(s) 580, 1224, 1314
BstSLI GKGCMC 1 cut(s) 200
BstUI CGCG 3 cut(s) 65, 203, 1125
BstV1I GCAGC 2 cut(s) 833, 1193
BstV2I GAAGAC 3 cut(s) 145, 401, 486
BstX2I RGATCY 3 cut(s) 385, 469, 931
BstXI CCANNNNNNTGG 1 cut(s) 1504
BstYI RGATCY 3 cut(s) 385, 469, 931
BtgI CCRYGG 3 cut(s) 19, 389, 1139
BtsCI GGATG 4 cut(s) 189, 1365, 1558, 1565
BtsI GCAGTG 3 cut(s) 577, 1305, 1564
BtsIMutI CAGTG 5 cut(s) 295, 577, 1305, 1428, 1564
BveI ACCTGC 2 cut(s) 573, 1516
Cac8I GCNNGC 3 cut(s) 26, 533, 1179
CaiI CAGNNNCTG 2 cut(s) 1307, 1531
CciI TCATGA 1 cut(s) 441
Cfr10I RCCGGY 1 cut(s) 552
Cfr13I GGNCC 2 cut(s) 208, 1271
CseI GACGC 3 cut(s) 24, 464, 1114
Csp6I GTAC 3 cut(s) 280, 500, 1459
CspAI ACCGGT 1 cut(s) 552
CviQI GTAC 3 cut(s) 280, 500, 1459
DdeI CTNAG 6 cut(s) 132, 356, 473, 961, 1089, 1185
DpnI GATC 9 cut(s) 5, 387, 471, 573, 662, 911, 933, 1086, 1324
DpnII GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
DrdI GACNNNNNNGTC 2 cut(s) 458, 1492
DseDI GACNNNNNNGTC 2 cut(s) 458, 1492
Eam1104I CTCTTC 2 cut(s) 191, 731
EarI CTCTTC 2 cut(s) 191, 731
Eco130I CCWWGG 3 cut(s) 19, 389, 1139
Eco31I GGTCTC 2 cut(s) 1237, 1502
Eco47I GGWCC 2 cut(s) 208, 1271
Eco57I CTGAAG 1 cut(s) 755
Eco88I CYCGRG 1 cut(s) 1519
Eco91I GGTNACC 2 cut(s) 85, 1368
EcoO65I GGTNACC 2 cut(s) 85, 1368
EcoRI GAATTC 1 cut(s) 1044
EcoRII CCWGG 5 cut(s) 102, 114, 891, 1363, 1496
EcoT14I CCWWGG 3 cut(s) 19, 389, 1139
ErhI CCWWGG 3 cut(s) 19, 389, 1139
Esp3I CGTCTC 2 cut(s) 1253, 1381
FaqI GGGAC 2 cut(s) 120, 843
FauNDI CATATG 2 cut(s) 408, 880
FbaI TGATCA 1 cut(s) 660
Fnu4HI GCNGC 2 cut(s) 822, 1182
FokI GGATG 4 cut(s) 176, 1372, 1552, 1565
Fsp4HI GCNGC 2 cut(s) 822, 1182
FspBI CTAG 1 cut(s) 752
GluI GCNGC 2 cut(s) 822, 1182
GsuI CTGGAG 3 cut(s) 244, 450, 1526
HapII CCGG 4 cut(s) 193, 284, 553, 1269
HgaI GACGC 3 cut(s) 24, 464, 1114
Hin1I GRCGYC 1 cut(s) 16
HincII GTYRAC 2 cut(s) 1104, 1485
HindII GTYRAC 2 cut(s) 1104, 1485
HindIII AAGCTT 1 cut(s) 350
HinfI GANTC 7 cut(s) 60, 126, 870, 947, 986, 1051, 1235
HpaII CCGG 4 cut(s) 193, 284, 553, 1269
Hpy166II GTNNAC 7 cut(s) 198, 500, 1020, 1104, 1415, 1428, 1485
Hpy188I TCNGA 7 cut(s) 357, 476, 636, 875, 952, 964, 1050
Hpy188III TCNNGA 9 cut(s) 232, 261, 331, 383, 442, 467, 862, 1269, 1519
Hpy8I GTNNAC 7 cut(s) 198, 500, 1020, 1104, 1415, 1428, 1485
Hpy99I CGWCG 3 cut(s) 208, 455, 458
HpyAV CCTTC 9 cut(s) 46, 100, 557, 662, 859, 1053, 1162, 1392, 1543
HpyCH4III ACNGT 3 cut(s) 142, 151, 599
HpyCH4V TGCA 9 cut(s) 49, 198, 540, 549, 582, 1026, 1040, 1226, 1310
HpyF10VI GCNNNNNNNGC 9 cut(s) 30, 537, 546, 555, 564, 773, 1178, 1190, 1316
HpyF3I CTNAG 6 cut(s) 132, 356, 473, 961, 1089, 1185
Hsp92I GRCGYC 1 cut(s) 16
Kpn2I TCCGGA 1 cut(s) 1268
KpnI GGTACC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 660
Kzo9I GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
LmnI GCTCC 3 cut(s) 263, 412, 1501
Lsp1109I GCAGC 2 cut(s) 833, 1193
LweI GCATC 3 cut(s) 1027, 1350, 1574
MaeI CTAG 1 cut(s) 752
MaeIII GTNAC 5 cut(s) 85, 142, 651, 1368, 1466
MalI GATC 9 cut(s) 5, 387, 471, 573, 662, 911, 933, 1086, 1324
MboI GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
MfeI CAATTG 1 cut(s) 681
MflI RGATCY 3 cut(s) 385, 469, 931
MhlI GDGCHC 4 cut(s) 200, 441, 729, 1289
MluCI AATT 4 cut(s) 681, 1044, 1074, 1203
MroI TCCGGA 1 cut(s) 1268
MseI TTAA 5 cut(s) 291, 590, 939, 1134, 1340
MslI CAYNNNNRTG 1 cut(s) 407
MspA1I CMGCKG 1 cut(s) 1184
MspI CCGG 4 cut(s) 193, 284, 553, 1269
MspR9I CCNGG 6 cut(s) 104, 116, 284, 893, 1365, 1498
MunI CAATTG 1 cut(s) 681
MvaI CCWGG 5 cut(s) 104, 116, 893, 1365, 1498
MvnI CGCG 3 cut(s) 65, 203, 1125
MwoI GCNNNNNNNGC 9 cut(s) 30, 537, 546, 555, 564, 773, 1178, 1190, 1316
NciI CCSGG 1 cut(s) 284
NcoI CCATGG 3 cut(s) 19, 389, 1139
NdeI CATATG 2 cut(s) 408, 880
NdeII GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
NlaIV GGNNCC 7 cut(s) 210, 259, 281, 387, 414, 423, 933
NmuCI GTSAC 3 cut(s) 85, 142, 1368
NspI RCATGY 2 cut(s) 549, 1026
PaeR7I CTCGAG 1 cut(s) 1519
PagI TCATGA 1 cut(s) 441
PaqCI CACCTGC 1 cut(s) 573
PfeI GAWTC 7 cut(s) 60, 126, 870, 947, 986, 1051, 1235
PflFI GACNNNGTC 1 cut(s) 458
PflMI CCANNNNNTGG 1 cut(s) 922
PinAI ACCGGT 1 cut(s) 552
PkrI GCNGC 2 cut(s) 823, 1183
PshBI ATTAAT 1 cut(s) 1134
PsiI TTATAA 1 cut(s) 368
Psp6I CCWGG 5 cut(s) 102, 114, 891, 1363, 1496
PspEI GGTNACC 2 cut(s) 85, 1368
PspGI CCWGG 5 cut(s) 102, 114, 891, 1363, 1496
PspN4I GGNNCC 7 cut(s) 210, 259, 281, 387, 414, 423, 933
PspPI GGNCC 2 cut(s) 208, 1271
PstI CTGCAG 2 cut(s) 584, 1228
PstNI CAGNNNCTG 2 cut(s) 1307, 1531
PsuI RGATCY 3 cut(s) 385, 469, 931
PsyI GACNNNGTC 1 cut(s) 458
PvuII CAGCTG 1 cut(s) 1184
RsaI GTAC 3 cut(s) 281, 501, 1460
RsaNI GTAC 3 cut(s) 280, 500, 1459
RseI CAYNNNNRTG 1 cut(s) 407
SaqAI TTAA 5 cut(s) 291, 590, 939, 1134, 1340
SatI GCNGC 2 cut(s) 822, 1182
Sau3AI GATC 9 cut(s) 3, 385, 469, 571, 660, 909, 931, 1084, 1322
Sau96I GGNCC 2 cut(s) 208, 1271
ScrFI CCNGG 6 cut(s) 104, 116, 284, 893, 1365, 1498
SduI GDGCHC 4 cut(s) 200, 441, 729, 1289
SfaNI GCATC 3 cut(s) 1027, 1350, 1574
SfcI CTRYAG 3 cut(s) 580, 1224, 1314
Sfr274I CTCGAG 1 cut(s) 1519
SinI GGWCC 2 cut(s) 208, 1271
SlaI CTCGAG 1 cut(s) 1519
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 2 cut(s) 331, 1519
SmoI CTYRAG 2 cut(s) 331, 1519
Sse9I AATT 4 cut(s) 681, 1044, 1074, 1203
SsiI CCGC 3 cut(s) 65, 201, 1123
SspMI CTAG 1 cut(s) 752
StyD4I CCNGG 6 cut(s) 102, 114, 282, 891, 1363, 1496
StyI CCWWGG 3 cut(s) 19, 389, 1139
TaaI ACNGT 3 cut(s) 142, 151, 599
TaqI TCGA 5 cut(s) 124, 513, 570, 1346, 1520
TaqII GACCGA 2 cut(s) 163, 775
TasI AATT 4 cut(s) 681, 1044, 1074, 1203
TatI WGTACW 2 cut(s) 499, 1458
TfiI GAWTC 7 cut(s) 60, 126, 870, 947, 986, 1051, 1235
Tru1I TTAA 5 cut(s) 291, 590, 939, 1134, 1340
Tru9I TTAA 5 cut(s) 291, 590, 939, 1134, 1340
TscAI CASTG 5 cut(s) 302, 584, 1312, 1435, 1564
TseFI GTSAC 3 cut(s) 85, 142, 1368
TseI GCWGC 2 cut(s) 821, 1181
Tsp45I GTSAC 3 cut(s) 85, 142, 1368
TspDTI ATGAA 7 cut(s) 178, 292, 458, 616, 836, 914, 1227
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 5 cut(s) 302, 584, 1312, 1435, 1564
Tth111I GACNNNGTC 1 cut(s) 458
Van91I CCANNNNNTGG 1 cut(s) 922
VneI GTGCAC 1 cut(s) 196
VpaK11BI GGWCC 2 cut(s) 208, 1271
VspI ATTAAT 1 cut(s) 1134
XapI RAATTY 2 cut(s) 1044, 1203
XceI RCATGY 2 cut(s) 549, 1026
XcmI CCANNNNNNNNNTGG 1 cut(s) 406
XhoI CTCGAG 1 cut(s) 1519
XspI CTAG 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.