Rh3DG300400

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0011254
Physical Location & Seq
Forward (+)
31652347 .. 31655186
2840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG300400.1

Sequence Viewer

Length: 1530 bp
ATGGTGGGAATCGCGGTTTTTAGTTTTCTGGTGGTGACCTTCTACACATTCCTGGGACTTTTCCTGGGAAATCGAATCGCGGAGATTACAGTCACCACAGTCTTCTCCTTTGTTGCTGTTTCGGTCATGTTTCTCTTCATCCGGTGCACCGCGACGGACCCAACTGACAGAACCAGCTTCAAGAAGAAGAAGAAGAAGAAGAAGAAAGGCTCCAGAGGAGGTGGTAAAGGGTACCCGGAACTTAATCACTGGTTCATTCTGGGGCAGATTATGGTCAGGTTCTTGAAGAGAGTGGAGAAGAAGCTTCTTAGGACTTTTATAAGGAGGAGTTATCTGGATCCGTGGAAGACCAGCACTCATATGGAGCCGTTGGTTCCTTTTCCATTTGTGCTCATGAAAGACGACGACGCTGTCTCTCCCGATCTCAGAGAAGATGACATCTCCTTTTGTGCACTCTGCGACTTCGAGGTGAAAAAACGAAGCAAGCACTGCAGAACATGCAACCGATGCGTTGAAGGGTTCGATCACCACTGCAGGTGGTTAAACAACTGTGTTGGTAAAAAGAACTACACCTCATTCATTCTTCTGATGGCTTTCGTTTTGTTACTTTTGATCATAGAAGGAGGAACAGCAATTGCCATATTTGTCAGGTGCTTTACCGATAAAAATGGAATAGAGCAGGAGCTGAAGAGGAAACTCTTCCTAGACTTTCCAAGAGCTGTTCTTGCCACAATATCGGTCTTGCTAACTCTATTGACAGCTTATGGTTCAGCAGCAATGGGACAGCTTTTCTTCTTTCATATGGTTCTCATTAAGAAGGGAATCAGAACATATGATTATATCTTGGCAATGAAAGAGGAGATCAACCAGTCTATGGAAATGGATCCATTTAATGATGATTCAGATTTCTCATCAGATGAGAGCATTAGTGATTTTGATTCACCCGAAAAGCCGTCATGTGTATCAAGGTTTATATGCAGAGGACATGATGCAGGAATTCAGAATCCCAGAAGCCTGTCCATAAGAATTGATGGTGATCCTCAGCCCTCCACGTCAACCAAGCCACAAGGTTTCCGCGTCAGCATTAATCCATGGAGGCTGATAAAGTTGAGCAAAGAGAAGGCATTGCTCGCAGCTGAGAAAGCCAGAGAAAGAATTTTGAAACAGAAGCCATCTGCAGAGCATGATTCATTGAGACCACTACCATTAGAGACGAAATCCGGACCATTGACGATGAGCACAGATAGAACCACAGCCACTGCAACTACAGCAGGATCAGGCTTAACACCTTTAATATCGAAAGGGGGGTGGATGCCAGGGTCACCCGTCGCAAAGTTTTCAAGCCCAAGAAGGAGGTTTTCTGGCTCACCAACCATGTTCACTGGCATTGTTCCCTCACCAAAGCACAAGTACAAAAGTAACTTTGACTTGAAGTTGACAGAGGTGTCCAGGGAGCTGGAGACCTATATCTCGAGGCAGGTTCTGTGTTCTGTTATAAAGAAGGATGGCAGTGAAGCATCCCCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DHHC

Protein Analysis

509

Amino Acids

57.44

Weight (kDa)

9.58

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 145 - 281 1.2e-31 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011254)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01730
fragaria_vesca FvH4_1g26210 FvH4_1g26210
malus_domestica MD09G1290600.v1.1 MD17G1285300.v1.1
prunus_persica Prupe.3G002400_v2.0.a1 Prupe.3G002400_v2.0.a1
pyrus_communis pycom09g19820 pycom17g28110
rosa_chinensis RchiOBHm_Chr3g0485751
rosa_laevigata RLG00000023128
rosa_multiflora Rmu_sc0003005.1_g000002
rosa_roxburghii Rroxscaffold_6G00396350 Rroxscaffold_6G00396370
rosa_rugosa Rorug03G0221100
rosa_samantha Rh3AG270400 Rh3BG305900 Rh3CG304300 Rh3DG300400
rosa_wichuraiana Rw3G024080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 320, 1496
AarI CACCTGC 1 cut(s) 525
AasI GACNNNNNNGTC 2 cut(s) 410, 1444
Acc36I ACCTGC 2 cut(s) 525, 1468
Acc65I GGTACC 1 cut(s) 231
AccB1I GGYRCC 1 cut(s) 231
AccB7I CCANNNNNTGG 1 cut(s) 874
AccII CGCG 4 cut(s) 14, 80, 152, 1077
AccIII TCCGGA 1 cut(s) 1220
AciI CCGC 4 cut(s) 14, 80, 150, 1075
AclWI GGATC 6 cut(s) 332, 345, 878, 891, 1031, 1282
AcsI RAATTY 2 cut(s) 996, 1155
AcuI CTGAAG 1 cut(s) 707
AfaI GTAC 2 cut(s) 233, 1412
AfiI CCNNNNNNNGG 1 cut(s) 874
AgsI TTSAA 6 cut(s) 181, 286, 515, 1162, 1341, 1432
AjiI CACGTC 1 cut(s) 1053
AjnI CCWGG 4 cut(s) 51, 63, 1315, 1448
AluBI AGCT 8 cut(s) 177, 304, 685, 719, 761, 787, 1136, 1456
AluI AGCT 8 cut(s) 177, 304, 685, 719, 761, 787, 1136, 1456
Alw21I GWGCWC 4 cut(s) 149, 393, 454, 1241
Alw26I GTCTC 4 cut(s) 418, 1189, 1205, 1454
Alw44I GTGCAC 2 cut(s) 145, 450
AlwI GGATC 6 cut(s) 332, 345, 878, 891, 1031, 1282
AlwNI CAGNNNCTG 3 cut(s) 685, 1259, 1483
Ama87I CYCGRG 1 cut(s) 1471
Aor13HI TCCGGA 1 cut(s) 1220
ApaLI GTGCAC 2 cut(s) 145, 450
ApeKI GCWGC 2 cut(s) 773, 1133
ApoI RAATTY 2 cut(s) 996, 1155
AseI ATTAAT 1 cut(s) 1086
Asp700I GAANNNNTTC 1 cut(s) 698
Asp718I GGTACC 1 cut(s) 231
AspS9I GGNCC 2 cut(s) 157, 1223
AsuC2I CCSGG 1 cut(s) 236
AsuHPI GGTGA 9 cut(s) 46, 85, 481, 518, 933, 1046, 1314, 1359, 1389
AvaI CYCGRG 1 cut(s) 1471
AvaII GGWCC 2 cut(s) 157, 1223
BaeGI GKGCMC 2 cut(s) 149, 454
BamHI GGATCC 2 cut(s) 337, 883
BanI GGYRCC 1 cut(s) 231
BbsI GAAGAC 2 cut(s) 94, 353
Bbv12I GWGCWC 4 cut(s) 149, 393, 454, 1241
BbvCI CCTCAGC 1 cut(s) 1041
BbvI GCAGC 2 cut(s) 785, 1145
BccI CCATC 4 cut(s) 583, 1025, 1180, 1499
BceAI ACGGC 2 cut(s) 352, 937
BciT130I CCWGG 4 cut(s) 53, 65, 1317, 1450
BclI TGATCA 1 cut(s) 612
BcnI CCSGG 1 cut(s) 236
BcoDI GTCTC 4 cut(s) 418, 1189, 1205, 1454
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 4 cut(s) 490, 532, 1176, 1266
BfuAI ACCTGC 2 cut(s) 525, 1468
BisI GCNGC 2 cut(s) 774, 1134
BlsI GCNGC 2 cut(s) 775, 1135
Bme1390I CCNGG 5 cut(s) 53, 65, 236, 1317, 1450
Bme18I GGWCC 2 cut(s) 157, 1223
BmeT110I CYCGRG 1 cut(s) 1471
BmgBI CACGTC 1 cut(s) 1053
BmgT120I GGNCC 2 cut(s) 157, 1223
BmiI GGNNCC 7 cut(s) 159, 211, 233, 339, 366, 375, 885
BmrFI CCNGG 5 cut(s) 53, 65, 236, 1317, 1450
BmsI GCATC 4 cut(s) 497, 979, 1302, 1526
BpiI GAAGAC 2 cut(s) 94, 353
BpmI CTGGAG 2 cut(s) 196, 1478
Bpu10I CCTNAGC 1 cut(s) 1041
BpuMI CCSGG 1 cut(s) 236
BsaBI GATNNNNATC 1 cut(s) 1035
BsaI GGTCTC 2 cut(s) 1189, 1454
BsaJI CCNNGG 6 cut(s) 52, 64, 341, 1091, 1316, 1449
BsaWI WCCGGW 2 cut(s) 141, 1220
Bsc4I CCNNNNNNNGG 1 cut(s) 874
Bse1I ACTGG 3 cut(s) 254, 868, 1387
Bse3DI GCAATG 3 cut(s) 783, 855, 1124
Bse8I GATNNNNATC 1 cut(s) 1035
BseAI TCCGGA 1 cut(s) 1220
BseBI CCWGG 4 cut(s) 53, 65, 1317, 1450
BseDI CCNNGG 6 cut(s) 52, 64, 341, 1091, 1316, 1449
BseGI GGATG 4 cut(s) 138, 1317, 1510, 1517
BseJI GATNNNNATC 1 cut(s) 1035
BseLI CCNNNNNNNGG 1 cut(s) 874
BseMI GCAATG 3 cut(s) 783, 855, 1124
BseMII CTCAG 3 cut(s) 439, 1055, 1128
BseNI ACTGG 3 cut(s) 254, 868, 1387
BseRI GAGGAG 3 cut(s) 231, 340, 872
BseSI GKGCMC 2 cut(s) 149, 454
BseXI GCAGC 2 cut(s) 785, 1145
Bsh1236I CGCG 4 cut(s) 14, 80, 152, 1077
BshNI GGYRCC 1 cut(s) 231
BsiHKAI GWGCWC 4 cut(s) 149, 393, 454, 1241
BsiHKCI CYCGRG 1 cut(s) 1471
BsiSI CCGG 3 cut(s) 142, 236, 1221
BslFI GGGAC 2 cut(s) 69, 795
BslI CCNNNNNNNGG 1 cut(s) 874
BsmAI GTCTC 4 cut(s) 418, 1189, 1205, 1454
BsmBI CGTCTC 1 cut(s) 1205
BsmFI GGGAC 2 cut(s) 69, 795
Bso31I GGTCTC 2 cut(s) 1189, 1454
BsoBI CYCGRG 1 cut(s) 1471
Bsp1286I GDGCHC 4 cut(s) 149, 393, 454, 1241
Bsp13I TCCGGA 1 cut(s) 1220
Bsp143I GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
Bsp19I CCATGG 1 cut(s) 1091
BspACI CCGC 4 cut(s) 14, 80, 150, 1075
BspCNI CTCAG 3 cut(s) 438, 1054, 1129
BspEI TCCGGA 1 cut(s) 1220
BspFNI CGCG 4 cut(s) 14, 80, 152, 1077
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 7 cut(s) 159, 211, 233, 339, 366, 375, 885
BspMAI CTGCAG 3 cut(s) 494, 536, 1180
BspMI ACCTGC 2 cut(s) 525, 1468
BspPI GGATC 6 cut(s) 332, 345, 878, 891, 1031, 1282
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 2 cut(s) 1189, 1454
BsrDI GCAATG 3 cut(s) 783, 855, 1124
BsrI ACTGG 3 cut(s) 254, 868, 1387
BssECI CCNNGG 6 cut(s) 52, 64, 341, 1091, 1316, 1449
BssMI GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
BssT1I CCWWGG 1 cut(s) 1091
Bst2UI CCWGG 4 cut(s) 53, 65, 1317, 1450
Bst4CI ACNGT 3 cut(s) 91, 100, 551
Bst6I CTCTTC 4 cut(s) 140, 281, 683, 704
BstAPI GCANNNNNTGC 3 cut(s) 489, 498, 507
BstC8I GCNNGC 2 cut(s) 485, 1131
BstDEI CTNAG 4 cut(s) 308, 425, 1041, 1137
BstDSI CCRYGG 2 cut(s) 341, 1091
BstEII GGTNACC 2 cut(s) 34, 1320
BstF5I GGATG 4 cut(s) 138, 1317, 1510, 1517
BstFNI CGCG 4 cut(s) 14, 80, 152, 1077
BstKTI GATC 8 cut(s) 340, 424, 526, 615, 864, 886, 1039, 1277
BstMAI GTCTC 4 cut(s) 418, 1189, 1205, 1454
BstMBI GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
BstMWI GCNNNNNNNGC 7 cut(s) 489, 498, 507, 725, 1130, 1142, 1268
BstNI CCWGG 4 cut(s) 53, 65, 1317, 1450
BstNSI RCATGY 1 cut(s) 501
BstPI GGTNACC 2 cut(s) 34, 1320
BstSCI CCNGG 5 cut(s) 51, 63, 234, 1315, 1448
BstSFI CTRYAG 4 cut(s) 490, 532, 1176, 1266
BstSLI GKGCMC 2 cut(s) 149, 454
BstUI CGCG 4 cut(s) 14, 80, 152, 1077
BstV1I GCAGC 2 cut(s) 785, 1145
BstV2I GAAGAC 2 cut(s) 94, 353
BstX2I RGATCY 2 cut(s) 337, 883
BstXI CCANNNNNNTGG 1 cut(s) 1456
BstYI RGATCY 2 cut(s) 337, 883
BtgI CCRYGG 2 cut(s) 341, 1091
BtrI CACGTC 1 cut(s) 1053
BtsCI GGATG 4 cut(s) 138, 1317, 1510, 1517
BtsI GCAGTG 4 cut(s) 487, 529, 1257, 1516
BtsIMutI CAGTG 6 cut(s) 247, 487, 529, 1257, 1380, 1516
BveI ACCTGC 2 cut(s) 525, 1468
Cac8I GCNNGC 2 cut(s) 485, 1131
CaiI CAGNNNCTG 3 cut(s) 685, 1259, 1483
CciI TCATGA 1 cut(s) 393
Cfr13I GGNCC 2 cut(s) 157, 1223
CseI GACGC 2 cut(s) 416, 1066
Csp6I GTAC 2 cut(s) 232, 1411
CviAII CATG 8 cut(s) 127, 394, 498, 957, 986, 1092, 1184, 1375
CviQI GTAC 2 cut(s) 232, 1411
DdeI CTNAG 4 cut(s) 308, 425, 1041, 1137
DpnI GATC 8 cut(s) 339, 423, 525, 614, 863, 885, 1038, 1276
DpnII GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
DrdI GACNNNNNNGTC 2 cut(s) 410, 1444
DseDI GACNNNNNNGTC 2 cut(s) 410, 1444
Eam1104I CTCTTC 4 cut(s) 140, 281, 683, 704
EarI CTCTTC 4 cut(s) 140, 281, 683, 704
Eco130I CCWWGG 1 cut(s) 1091
Eco31I GGTCTC 2 cut(s) 1189, 1454
Eco47I GGWCC 2 cut(s) 157, 1223
Eco57I CTGAAG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 1471
Eco91I GGTNACC 2 cut(s) 34, 1320
EcoO65I GGTNACC 2 cut(s) 34, 1320
EcoRI GAATTC 1 cut(s) 996
EcoRII CCWGG 4 cut(s) 51, 63, 1315, 1448
EcoT14I CCWWGG 1 cut(s) 1091
ErhI CCWWGG 1 cut(s) 1091
Esp3I CGTCTC 1 cut(s) 1205
FaeI CATG 8 cut(s) 130, 397, 501, 960, 989, 1095, 1187, 1378
FaqI GGGAC 2 cut(s) 69, 795
FatI CATG 8 cut(s) 126, 393, 497, 956, 985, 1091, 1183, 1374
FauNDI CATATG 3 cut(s) 360, 801, 832
FbaI TGATCA 1 cut(s) 612
Fnu4HI GCNGC 2 cut(s) 774, 1134
FokI GGATG 4 cut(s) 125, 1324, 1504, 1517
Fsp4HI GCNGC 2 cut(s) 774, 1134
FspBI CTAG 1 cut(s) 704
GluI GCNGC 2 cut(s) 774, 1134
GsuI CTGGAG 2 cut(s) 196, 1478
HapII CCGG 3 cut(s) 142, 236, 1221
HgaI GACGC 2 cut(s) 416, 1066
Hin1II CATG 8 cut(s) 130, 397, 501, 960, 989, 1095, 1187, 1378
HincII GTYRAC 2 cut(s) 1056, 1437
HindII GTYRAC 2 cut(s) 1056, 1437
HindIII AAGCTT 1 cut(s) 302
HinfI GANTC 7 cut(s) 9, 75, 822, 899, 938, 1003, 1187
HpaII CCGG 3 cut(s) 142, 236, 1221
HphI GGTGA 9 cut(s) 46, 85, 481, 518, 933, 1046, 1314, 1359, 1389
Hpy166II GTNNAC 5 cut(s) 147, 452, 1056, 1380, 1437
Hpy188I TCNGA 6 cut(s) 428, 588, 827, 904, 916, 1002
Hpy188III TCNNGA 8 cut(s) 181, 213, 283, 335, 394, 419, 1221, 1471
Hpy8I GTNNAC 5 cut(s) 147, 452, 1056, 1380, 1437
Hpy99I CGWCG 4 cut(s) 157, 407, 410, 1331
HpyAV CCTTC 7 cut(s) 49, 509, 614, 811, 1114, 1344, 1495
HpyCH4III ACNGT 3 cut(s) 91, 100, 551
HpyCH4IV ACGT 1 cut(s) 1052
HpyCH4V TGCA 9 cut(s) 147, 452, 492, 501, 534, 978, 992, 1178, 1262
HpyF10VI GCNNNNNNNGC 7 cut(s) 489, 498, 507, 725, 1130, 1142, 1268
HpyF3I CTNAG 4 cut(s) 308, 425, 1041, 1137
HpySE526I ACGT 1 cut(s) 1052
Hsp92II CATG 8 cut(s) 130, 397, 501, 960, 989, 1095, 1187, 1378
Kpn2I TCCGGA 1 cut(s) 1220
KpnI GGTACC 1 cut(s) 235
Ksp22I TGATCA 1 cut(s) 612
Kzo9I GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
LmnI GCTCC 4 cut(s) 215, 364, 682, 1453
Lsp1109I GCAGC 2 cut(s) 785, 1145
LweI GCATC 4 cut(s) 497, 979, 1302, 1526
MaeI CTAG 1 cut(s) 704
MaeII ACGT 1 cut(s) 1052
MaeIII GTNAC 5 cut(s) 34, 91, 603, 1320, 1418
MalI GATC 8 cut(s) 339, 423, 525, 614, 863, 885, 1038, 1276
MboI GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
MfeI CAATTG 1 cut(s) 633
MflI RGATCY 2 cut(s) 337, 883
MhlI GDGCHC 4 cut(s) 149, 393, 454, 1241
MluCI AATT 4 cut(s) 633, 996, 1026, 1155
MroI TCCGGA 1 cut(s) 1220
MroXI GAANNNNTTC 1 cut(s) 698
MseI TTAA 7 cut(s) 243, 542, 813, 891, 1086, 1283, 1292
MslI CAYNNNNRTG 1 cut(s) 359
MspA1I CMGCKG 1 cut(s) 1136
MspI CCGG 3 cut(s) 142, 236, 1221
MspR9I CCNGG 5 cut(s) 53, 65, 236, 1317, 1450
MunI CAATTG 1 cut(s) 633
MvaI CCWGG 4 cut(s) 53, 65, 1317, 1450
MvnI CGCG 4 cut(s) 14, 80, 152, 1077
MwoI GCNNNNNNNGC 7 cut(s) 489, 498, 507, 725, 1130, 1142, 1268
NciI CCSGG 1 cut(s) 236
NcoI CCATGG 1 cut(s) 1091
NdeI CATATG 3 cut(s) 360, 801, 832
NdeII GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
NlaIII CATG 8 cut(s) 130, 397, 501, 960, 989, 1095, 1187, 1378
NlaIV GGNNCC 7 cut(s) 159, 211, 233, 339, 366, 375, 885
NmuCI GTSAC 3 cut(s) 34, 91, 1320
NspI RCATGY 1 cut(s) 501
PaeR7I CTCGAG 1 cut(s) 1471
PagI TCATGA 1 cut(s) 393
PaqCI CACCTGC 1 cut(s) 525
PdmI GAANNNNTTC 1 cut(s) 698
PfeI GAWTC 7 cut(s) 9, 75, 822, 899, 938, 1003, 1187
PflFI GACNNNGTC 1 cut(s) 410
PflMI CCANNNNNTGG 1 cut(s) 874
PkrI GCNGC 2 cut(s) 775, 1135
PshBI ATTAAT 1 cut(s) 1086
PsiI TTATAA 2 cut(s) 320, 1496
Psp6I CCWGG 4 cut(s) 51, 63, 1315, 1448
PspEI GGTNACC 2 cut(s) 34, 1320
PspGI CCWGG 4 cut(s) 51, 63, 1315, 1448
PspN4I GGNNCC 7 cut(s) 159, 211, 233, 339, 366, 375, 885
PspPI GGNCC 2 cut(s) 157, 1223
PstI CTGCAG 3 cut(s) 494, 536, 1180
PstNI CAGNNNCTG 3 cut(s) 685, 1259, 1483
PsuI RGATCY 2 cut(s) 337, 883
PsyI GACNNNGTC 1 cut(s) 410
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 2 cut(s) 233, 1412
RsaNI GTAC 2 cut(s) 232, 1411
RseI CAYNNNNRTG 1 cut(s) 359
SaqAI TTAA 7 cut(s) 243, 542, 813, 891, 1086, 1283, 1292
SatI GCNGC 2 cut(s) 774, 1134
Sau3AI GATC 8 cut(s) 337, 421, 523, 612, 861, 883, 1036, 1274
Sau96I GGNCC 2 cut(s) 157, 1223
ScrFI CCNGG 5 cut(s) 53, 65, 236, 1317, 1450
SduI GDGCHC 4 cut(s) 149, 393, 454, 1241
SfaNI GCATC 4 cut(s) 497, 979, 1302, 1526
SfcI CTRYAG 4 cut(s) 490, 532, 1176, 1266
Sfr274I CTCGAG 1 cut(s) 1471
SinI GGWCC 2 cut(s) 157, 1223
SlaI CTCGAG 1 cut(s) 1471
SmiMI CAYNNNNRTG 1 cut(s) 359
SmlI CTYRAG 1 cut(s) 1471
SmoI CTYRAG 1 cut(s) 1471
Sse9I AATT 4 cut(s) 633, 996, 1026, 1155
SsiI CCGC 4 cut(s) 14, 80, 150, 1075
SspMI CTAG 1 cut(s) 704
StyD4I CCNGG 5 cut(s) 51, 63, 234, 1315, 1448
StyI CCWWGG 1 cut(s) 1091
TaaI ACNGT 3 cut(s) 91, 100, 551
TaiI ACGT 1 cut(s) 1055
TaqI TCGA 5 cut(s) 73, 465, 522, 1298, 1472
TaqII GACCGA 2 cut(s) 112, 727
TasI AATT 4 cut(s) 633, 996, 1026, 1155
TatI WGTACW 1 cut(s) 1410
TfiI GAWTC 7 cut(s) 9, 75, 822, 899, 938, 1003, 1187
Tru1I TTAA 7 cut(s) 243, 542, 813, 891, 1086, 1283, 1292
Tru9I TTAA 7 cut(s) 243, 542, 813, 891, 1086, 1283, 1292
TscAI CASTG 6 cut(s) 254, 494, 536, 1264, 1387, 1516
TseFI GTSAC 3 cut(s) 34, 91, 1320
TseI GCWGC 2 cut(s) 773, 1133
Tsp45I GTSAC 3 cut(s) 34, 91, 1320
TspDTI ATGAA 7 cut(s) 127, 244, 410, 568, 788, 866, 1179
TspGWI ACGGA 2 cut(s) 170, 330
TspRI CASTG 6 cut(s) 254, 494, 536, 1264, 1387, 1516
Tth111I GACNNNGTC 1 cut(s) 410
Van91I CCANNNNNTGG 1 cut(s) 874
VneI GTGCAC 2 cut(s) 145, 450
VpaK11BI GGWCC 2 cut(s) 157, 1223
VspI ATTAAT 1 cut(s) 1086
XapI RAATTY 2 cut(s) 996, 1155
XceI RCATGY 1 cut(s) 501
XcmI CCANNNNNNNNNTGG 1 cut(s) 358
XhoI CTCGAG 1 cut(s) 1471
XmnI GAANNNNTTC 1 cut(s) 698
XspI CTAG 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.