Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004599

Physical Location & Seq

Genomic Coordinates Forward (+)

1717932 .. 1726103

Gene Structure 8172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G023300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3066 bp

ATGGCCACTGAGGGCCTCACGAGAATGGTGGAAAGCGGCAGAGGCAAAAAGTGGCCTTCATCTAAGGATGCTGCAACATTTGGATCTGCATTGATAAGTATGGCAGCAGAGGATTCGAGCTGCATTTCGAAGGGGCGTAGTTTTCGGAGAGATAGAGCTGAAGTTGTACCTAATCGAAGTGGTAGTGCTCCACCAAGTATGGAAGGTTCCTTTTCCTCTATTGAAAACCTGTTAAGTCAACATAACTCCCGTATGGGAACAAGCTCGACTAATTTAAGCAGCATAGTTAATAATGTTGAGTTTGACGAACACCTGCGTTCAGACCCAGCTTATTTGGCATATTATTTATCGAATATGAACTTGAATGCAAGTCTTCCTCCACCACTTATCTTACGGGAGAATCATCAAATGGTCCGTCAAATTGGGGGCTTAGGCACCAATCGGAGATTGCCTTCTTTAGATGACAGCAGCAATGGATCCTTGCATCTTTCTCAAGGTTCTCTTTCCATTCATAAGGAGGACCCTACTGATGCTAGGTCAGCCACAATATCTAAAGATAACCTGGCAGAAAATAGTGGTGCAGTAATGCCTGTCAAGAACACGGCTTCTTTGGCAAGTTATAATAAGAGTTTAGTGGATCTCATACAGCAAGACTTCCCCCGAACTCCATCTCCTGTATATAATCAATCTCTCCCATCCAGTCTTGGAACAACAGATGAACAAACTGATACTGATGTACATTCGATTTCACCAAATGCTTCTTCTCTCAACAAGTCAAAATTACCAGAACCAAATGCAGGGTCTACAAATGATTGTTCAGATACAAGTTCCCTGGATGCGCATGCTGTTGGGTACATACCAAATGATGTTCCTTTGGCTACCACCACCCCAAGTATTCAACATCGTGATGCTACAGGGAACCTACAGCAAGATGAATCTAATTTTGAGCATGATGATGGGTTGGGGAATAATGCATCAATTAGCGGTGAGCTTGGGTTGGATCTTTCCAGGGTGAGAGCATCTAATGTTGATATCAACAATAACAAGCAAAATGAGAAACAATCTTATGGGAGGTATGTGCCACAAGACCAGCTTTCTACACAACAAAGTGTTCCATATCAACTTAAGGGGGTTCAGACTCAATTAGTTTCACAAGGAATGAATCATTTGCAAAGTGGAATGGAAAATCTTCCCCACGGCTATCCAAAGTTCTCTTCTATTGATATACAACCCTCATTGCACTCACCTGGATTCACACCCCCATTGTACGCTACAACAGCAGCATATATGACTTCAGGGAATCCATTCTACCCGAATTATCAGCCATCTGGTATATTTCCTGCACAATATGGCGCCGGTGGATATGCTTTAGGTTCTACATTTCTTCCTTCATATATGCCTGGGTATGCTTCCCATGGTTCCTTTCCTATGCCTTTTGATGCTACTTCAGGGCCAAGCTTTAATGGTCGAACTGCTGATGTTTCAAGAGGGGAGAGAATTCCCCATGGAGGAGATATGCAATACCCAAGTAGATTTTATGGGCAACATGGGCCAATGCTCCAGCCACCTTTTTCGGATCCCCTAAATATGCAATACTATCCACGCCCTTTGGAGGATGCATATGGTGCCTCAAGTCAATATGGTCACTTGGCATCAAGGGTTATTGGTGGCCAACTTTCACAGCAAGAACTATATAGTACTGCTTATACGGGTGATGCTTATACGGGTGACCAAAATTTTCAGTCTTCAAGTATTGGTAATCTGGGCATTCCAAGTCCAAGAAAAGTGGGAATCAATGGTAGTGGTTATTATGGAAATAATTCTACCATGCCTATAATGACACAGTTTCCAGCCTCGCCTCTTGGTAGTCCAATATTGCCATCATCTCCAATGGGTAGAACAAATCATCTTGGTCGGAAAAATGAAATCAGGTTTCCTCAAGGTTCGATTAGTGGAGTATATTCTGGATGGCAAGGGCCGAGAAGCTTCAGCTCGGATGACCCTAAAAGACATTCTTTTCTCGAAGAACTGAAAACTAGTAATCCCCGTAAGTTTGAACTTTCTGATATAGCAGGGCGCATTGTCGAGTTCAGTGTTGATCAACATGGGAGTAGATTTATTCAGCAGAAGCTAGAATACTGCACTGCCGAAGACAAGGCATCAGTTTTCAAAGAAATTCTTCCACGTGCTTCAAAACTAATGACCGATGTATTTGGTAATTATGTTATTCAGAAGTTTTTTGAATATGGGAGTGCCGAGGAGAGAAAGGAGCTTGCAGATCAACTTGCTGGACAAATGTTGCCTTTAAGTTTGCAGATGTATGGTTGTCGTGTAATCCAAAAGGCTCTTGAAGTTATTGAGCTTGACCAGAAAACACAACTTGTGCATGAGCTTGATGGACATGTTCTGAAATGTGTACGTGATCAAAATGGAAATCATGTAATACAGAAGTGTATAGAATGCATTCCCACAGAGAAAATTGGATTTATCATTTCTGCTTTTCGAGGCCAAGTTTCCACACTTTCTACTCATCCCTATGGTTGTCGCGTCATACAGAGAGTTTTGGAGCATTGTTCAGATGACATTCAAAGTCAATCTATAGTTGATGAAATCTTGGAATCTAGTTACACTCTTGCTCAAGACCAGTATGGGAATTATGTTACCCAGCATGTTTTGGAAAGGGGAAAGCCCTATGAAAGAAGCCAAATTATCAGCAAGTTGATTGGGAAAATTGTACAATTGAGTCAGCATAAATATGCATCAAATGTTGTTGAAAAGTGTCTGGAACATGGTGATGTTGCTGAGCGGGAGCTCTTGATTGAGGAAATCATTGGGCAAATGGAGGAAAATGATAGTCTGTTGCCAATGATGAAGGACCAATTTGCCAATTATGTGGTTCAGAAGGTTCTTGAAACAAGCAATGATAGACAGCGGGAAACACTGCTCAATCTTATAAGAGTTCATATAGATGCTCTGAAAAAATATACATACGGGAAACACATAGTTGTTCGGTTTGAACAGCTATCTGGTGAAGATGGCCAAACCTCAGAAGCTGAGGGGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006417 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009615 GO:0009628 GO:0009651 GO:0009819 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051607 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1903311 GO:1903313 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NABP PUF

Protein Analysis

1022

Amino Acids

112.26

Weight (kDa)

5.71

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20250 AT3G20250 AT3G20250
fragaria_vesca	FvH4_6g36910 FvH4_6g36910 FvH4_6g36910 FvH4_6g36910 FvH4_6g36910 FvH4_6g36910 FvH4_6g36910 FvH4_6g36910
malus_domestica	MD09G1165700.v1.1 MD17G1161900.v1.1
prunus_persica	Prupe.3G023300_v2.0.a1 Prupe.3G023300_v2.0.a1 Prupe.3G023300_v2.0.a1
pyrus_communis	pycom07g18900 pycom09g08300 pycom17g15500
rosa_chinensis	RchiOBHm_Chr2g0149341
rosa_laevigata	RLG00000020394
rosa_multiflora	Rmu_sc0000873.1_g000017
rosa_roxburghii	Rroxscaffold_2G00098200
rosa_rugosa	Rorug02G0410600 Rorug02G0410700 Rorug02G0410800
rosa_samantha	Rh2AG471400 Rh2BG483600 Rh2CG457300 Rh2DG492700
rosa_wichuraiana	Rw2G038360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	621, 2954
AarI	CACCTGC	1 cut(s)	321
Acc16I	TGCGCA	1 cut(s)	840
Acc36I	ACCTGC	1 cut(s)	321
AccB1I	GGYRCC	3 cut(s)	434, 1352, 1625
AccBSI	CCGCTC	1 cut(s)	2806
AccI	GTMKAC	1 cut(s)	803
AccII	CGCG	1 cut(s)	2547
AciI	CCGC	4 cut(s)	36, 984, 2806, 2932
AclWI	GGATC	7 cut(s)	91, 471, 484, 645, 1008, 1571, 1584
AcoI	YGGCCR	3 cut(s)	3, 1669, 3037
AcsI	RAATTY	3 cut(s)	1497, 1735, 2175
AcuI	CTGAAG	4 cut(s)	180, 1278, 1431, 1972
AcvI	CACGTG	1 cut(s)	2186
AcyI	GRCGYC	1 cut(s)	1353
AfaI	GTAC	7 cut(s)	168, 738, 854, 1268, 1699, 2418, 2736
AfiI	CCNNNNNNNGG	3 cut(s)	797, 1508, 1612
AflII	CTTAAG	1 cut(s)	1124
AflIII	ACRYGT	1 cut(s)	2401
AhlI	ACTAGT	1 cut(s)	2036
AjnI	CCWGG	5 cut(s)	561, 831, 1007, 1246, 1399
AjuI	GAANNNNNNNTTGG	4 cut(s)	745, 777, 1198, 1230
AloI	GAACNNNNNNTCC	2 cut(s)	655, 687
Alw21I	GWGCWC	2 cut(s)	190, 2814
AlwI	GGATC	7 cut(s)	91, 471, 484, 645, 1008, 1571, 1584
AlwNI	CAGNNNCTG	1 cut(s)	3053
AoxI	GGCC	9 cut(s)	3, 13, 53, 1451, 1550, 1669, 1976, 2506, 3037
ApeKI	GCWGC	6 cut(s)	71, 104, 120, 279, 468, 1280
ApoI	RAATTY	3 cut(s)	1497, 1735, 2175
ArsI	GACNNNNNNTTYG	4 cut(s)	400, 432, 785, 817
Asp700I	GAANNNNTTC	5 cut(s)	1188, 1304, 1819, 2178, 2463
AspLEI	GCGC	3 cut(s)	841, 1355, 2079
AspS9I	GGNCC	7 cut(s)	13, 412, 520, 1451, 1550, 1976, 2875
AsuHPI	GGTGA	8 cut(s)	741, 998, 1024, 1236, 1724, 1739, 2804, 3041
AsuII	TTCGAA	1 cut(s)	128
AvaII	GGWCC	3 cut(s)	412, 520, 2875
BaeI	ACNNNNGTAYC	2 cut(s)	720, 753
BalI	TGGCCA	3 cut(s)	5, 1671, 3039
BamHI	GGATCC	2 cut(s)	476, 1576
BanI	GGYRCC	3 cut(s)	434, 1352, 1625
BanII	GRGCYC	1 cut(s)	2814
BarI	GAAGNNNNNNTAC	2 cut(s)	2120, 2152
BauI	CACGAG	1 cut(s)	19
BbrPI	CACGTG	1 cut(s)	2186
BbsI	GAAGAC	3 cut(s)	365, 1737, 2157
Bbv12I	GWGCWC	2 cut(s)	190, 2814
BbvCI	CCTCAGC	1 cut(s)	3054
BbvI	GCAGC	6 cut(s)	58, 107, 116, 291, 480, 1292
BccI	CCATC	8 cut(s)	676, 703, 950, 1333, 1888, 1962, 2390, 3029
BceAI	ACGGC	2 cut(s)	618, 1213
BcgI	CGANNNNNNTGC	2 cut(s)	96, 130
BciT130I	CCWGG	5 cut(s)	563, 833, 1009, 1248, 1401
BclI	TGATCA	2 cut(s)	2098, 2422
BcuI	ACTAGT	1 cut(s)	2036
BfaI	CTAG	4 cut(s)	534, 2037, 2132, 2622
BfmI	CTRYAG	3 cut(s)	912, 923, 2598
BfoI	RGCGCY	1 cut(s)	1356
BfrI	CTTAAG	1 cut(s)	1124
BfuAI	ACCTGC	1 cut(s)	321
BisI	GCNGC	7 cut(s)	37, 72, 105, 121, 280, 469, 1281
BlpI	GCTNAGC	1 cut(s)	2802
BlsI	GCNGC	7 cut(s)	38, 73, 106, 122, 281, 470, 1282
BmcAI	AGTACT	1 cut(s)	1699
Bme1390I	CCNGG	5 cut(s)	563, 833, 1009, 1248, 1401
Bme18I	GGWCC	3 cut(s)	412, 520, 2875
BmgT120I	GGNCC	7 cut(s)	13, 412, 520, 1451, 1550, 1976, 2875
BmiI	GGNNCC	9 cut(s)	208, 436, 478, 522, 920, 1354, 1420, 1578, 1627
BmrFI	CCNGG	5 cut(s)	563, 833, 1009, 1248, 1401
BpiI	GAAGAC	3 cut(s)	365, 1737, 2157
BpmI	CTGGAG	1 cut(s)	1544
Bpu10I	CCTNAGC	2 cut(s)	430, 3054
Bpu1102I	GCTNAGC	1 cut(s)	2802
Bpu14I	TTCGAA	1 cut(s)	128
BpuEI	CTTGAG	4 cut(s)	477, 1615, 1923, 2622
BsaAI	YACGTR	2 cut(s)	2186, 2420
BsaHI	GRCGYC	1 cut(s)	1353
BsaJI	CCNNGG	7 cut(s)	831, 1008, 1195, 1400, 1414, 1504, 2256
BsaXI	ACNNNNNCTCC	2 cut(s)	655, 685
Bsc4I	CCNNNNNNNGG	3 cut(s)	797, 1508, 1612
Bse118I	RCCGGY	1 cut(s)	1355
Bse1I	ACTGG	2 cut(s)	699, 2644
Bse3DI	GCAATG	3 cut(s)	478, 1235, 2926
BseBI	CCWGG	5 cut(s)	563, 833, 1009, 1248, 1401
BseDI	CCNNGG	7 cut(s)	831, 1008, 1195, 1400, 1414, 1504, 2256
BseGI	GGATG	7 cut(s)	73, 695, 841, 1621, 1973, 2002, 2530
BseLI	CCNNNNNNNGG	3 cut(s)	797, 1508, 1612
BseMI	GCAATG	3 cut(s)	478, 1235, 2926
BseMII	CTCAG	3 cut(s)	2793, 3045, 3060
BseNI	ACTGG	2 cut(s)	699, 2644
BseRI	GAGGAG	2 cut(s)	1524, 2273
BseXI	GCAGC	6 cut(s)	58, 107, 116, 291, 480, 1292
BseYI	CCCAGC	2 cut(s)	325, 2664
BsgI	GTGCAG	3 cut(s)	600, 1326, 2125
Bsh1236I	CGCG	1 cut(s)	2547
BshFI	GGCC	9 cut(s)	5, 15, 55, 1453, 1552, 1671, 1978, 2508, 3039
BshNI	GGYRCC	3 cut(s)	434, 1352, 1625
BsiHKAI	GWGCWC	2 cut(s)	190, 2814
BsiSI	CCGG	1 cut(s)	1356
BslI	CCNNNNNNNGG	3 cut(s)	797, 1508, 1612
BsmI	GAATGC	4 cut(s)	370, 1767, 2463, 2465
BsnI	GGCC	9 cut(s)	5, 15, 55, 1453, 1552, 1671, 1978, 2508, 3039
Bsp119I	TTCGAA	1 cut(s)	128
Bsp1286I	GDGCHC	2 cut(s)	190, 2814
Bsp1407I	TGTACA	2 cut(s)	736, 2734
Bsp143I	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
Bsp1720I	GCTNAGC	1 cut(s)	2802
Bsp19I	CCATGG	2 cut(s)	1414, 1504
BspACI	CCGC	4 cut(s)	36, 984, 2806, 2932
BspANI	GGCC	9 cut(s)	5, 15, 55, 1453, 1552, 1671, 1978, 2508, 3039
BspCNI	CTCAG	3 cut(s)	2794, 3046, 3059
BspFNI	CGCG	1 cut(s)	2547
BspLI	GGNNCC	9 cut(s)	208, 436, 478, 522, 920, 1354, 1420, 1578, 1627
BspMI	ACCTGC	1 cut(s)	321
BspPI	GGATC	7 cut(s)	91, 471, 484, 645, 1008, 1571, 1584
BspT104I	TTCGAA	1 cut(s)	128
BspT107I	GGYRCC	3 cut(s)	434, 1352, 1625
BspTI	CTTAAG	1 cut(s)	1124
BsrBI	CCGCTC	1 cut(s)	2806
BsrDI	GCAATG	3 cut(s)	478, 1235, 2926
BsrFI	RCCGGY	1 cut(s)	1355
BsrGI	TGTACA	2 cut(s)	736, 2734
BsrI	ACTGG	2 cut(s)	699, 2644
BssAI	RCCGGY	1 cut(s)	1355
BssECI	CCNNGG	7 cut(s)	831, 1008, 1195, 1400, 1414, 1504, 2256
BssMI	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
BssNI	GRCGYC	1 cut(s)	1353
BssSI	CACGAG	1 cut(s)	19
BssT1I	CCWWGG	2 cut(s)	1414, 1504
Bst2BI	CACGAG	1 cut(s)	19
Bst2UI	CCWGG	5 cut(s)	563, 833, 1009, 1248, 1401
Bst4CI	ACNGT	1 cut(s)	1845
Bst6I	CTCTTC	1 cut(s)	1219
BstACI	GRCGYC	1 cut(s)	1353
BstAFI	CTTAAG	1 cut(s)	1124
BstAPI	GCANNNNNTGC	1 cut(s)	1625
BstAUI	TGTACA	2 cut(s)	736, 2734
BstBAI	YACGTR	2 cut(s)	2186, 2420
BstBI	TTCGAA	1 cut(s)	128
BstC8I	GCNNGC	2 cut(s)	843, 2274
BstDEI	CTNAG	6 cut(s)	9, 63, 430, 2802, 3046, 3054
BstDSI	CCRYGG	3 cut(s)	1195, 1414, 1504
BstEII	GGTNACC	1 cut(s)	1727
BstF5I	GGATG	7 cut(s)	73, 695, 841, 1621, 1973, 2002, 2530
BstFNI	CGCG	1 cut(s)	2547
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	3 cut(s)	841, 1355, 2079
BstKTI	GATC	8 cut(s)	86, 479, 640, 1003, 1579, 2101, 2281, 2425
BstMBI	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
BstMWI	GCNNNNNNNGC	8 cut(s)	42, 335, 539, 611, 1277, 1549, 1625, 3059
BstNI	CCWGG	5 cut(s)	563, 833, 1009, 1248, 1401
BstNSI	RCATGY	3 cut(s)	845, 2405, 2672
BstPI	GGTNACC	1 cut(s)	1727
BstSCI	CCNGG	5 cut(s)	561, 831, 1007, 1246, 1399
BstSFI	CTRYAG	3 cut(s)	912, 923, 2598
BstUI	CGCG	1 cut(s)	2547
BstV1I	GCAGC	6 cut(s)	58, 107, 116, 291, 480, 1292
BstV2I	GAAGAC	3 cut(s)	365, 1737, 2157
BstX2I	RGATCY	5 cut(s)	83, 476, 637, 1000, 1576
BstXI	CCANNNNNNTGG	1 cut(s)	2893
BstYI	RGATCY	5 cut(s)	83, 476, 637, 1000, 1576
BsuRI	GGCC	9 cut(s)	5, 15, 55, 1453, 1552, 1671, 1978, 2508, 3039
BtgI	CCRYGG	3 cut(s)	1195, 1414, 1504
BtsCI	GGATG	7 cut(s)	73, 695, 841, 1621, 1973, 2002, 2530
BtsI	GCAGTG	2 cut(s)	2142, 2939
BtsIMutI	CAGTG	4 cut(s)	6, 2098, 2142, 2939
BveI	ACCTGC	1 cut(s)	321
Cac8I	GCNNGC	2 cut(s)	843, 2274
CaiI	CAGNNNCTG	1 cut(s)	3053
CfoI	GCGC	3 cut(s)	841, 1355, 2079
Cfr10I	RCCGGY	1 cut(s)	1355
Cfr13I	GGNCC	7 cut(s)	13, 412, 520, 1451, 1550, 1976, 2875
CseI	GACGC	1 cut(s)	2536
Csp6I	GTAC	7 cut(s)	167, 737, 853, 1267, 1698, 2417, 2735
CspCI	CAANNNNNGTGG	6 cut(s)	1590, 1625, 1767, 1783, 1802, 1818
CviQI	GTAC	7 cut(s)	167, 737, 853, 1267, 1698, 2417, 2735
DdeI	CTNAG	6 cut(s)	9, 63, 430, 2802, 3046, 3054
DinI	GGCGCC	1 cut(s)	1354
DpnI	GATC	8 cut(s)	85, 478, 639, 1002, 1578, 2100, 2280, 2424
DpnII	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
EaeI	YGGCCR	3 cut(s)	3, 1669, 3037
Eam1104I	CTCTTC	1 cut(s)	1219
EarI	CTCTTC	1 cut(s)	1219
Ecl136II	GAGCTC	1 cut(s)	2812
Eco130I	CCWWGG	2 cut(s)	1414, 1504
Eco24I	GRGCYC	1 cut(s)	2814
Eco32I	GATATC	1 cut(s)	1033
Eco47I	GGWCC	3 cut(s)	412, 520, 2875
Eco53kI	GAGCTC	1 cut(s)	2812
Eco57I	CTGAAG	4 cut(s)	180, 1278, 1431, 1972
Eco72I	CACGTG	1 cut(s)	2186
Eco91I	GGTNACC	1 cut(s)	1727
EcoICRI	GAGCTC	1 cut(s)	2812
EcoO109I	RGGNCCY	2 cut(s)	13, 520
EcoO65I	GGTNACC	1 cut(s)	1727
EcoRI	GAATTC	1 cut(s)	1497
EcoRII	CCWGG	5 cut(s)	561, 831, 1007, 1246, 1399
EcoRV	GATATC	1 cut(s)	1033
EcoT14I	CCWWGG	2 cut(s)	1414, 1504
EcoT22I	ATGCAT	4 cut(s)	976, 1621, 2465, 2761
EcoT38I	GRGCYC	1 cut(s)	2814
EgeI	GGCGCC	1 cut(s)	1354
EheI	GGCGCC	1 cut(s)	1354
ErhI	CCWWGG	2 cut(s)	1414, 1504
FalI	AAGNNNNNCTT	8 cut(s)	486, 518, 1077, 1109, 1999, 2031, 2163, 2195
FauI	CCCGC	2 cut(s)	2799, 2925
FauNDI	CATATG	1 cut(s)	1621
FbaI	TGATCA	2 cut(s)	2098, 2422
FblI	GTMKAC	1 cut(s)	803
Fnu4HI	GCNGC	7 cut(s)	37, 72, 105, 121, 280, 469, 1281
FokI	GGATG	7 cut(s)	80, 682, 848, 1628, 1980, 2009, 2517
FriOI	GRGCYC	1 cut(s)	2814
Fsp4HI	GCNGC	7 cut(s)	37, 72, 105, 121, 280, 469, 1281
FspAI	RTGCGCAY	1 cut(s)	840
FspBI	CTAG	4 cut(s)	534, 2037, 2132, 2622
FspI	TGCGCA	1 cut(s)	840
GlaI	GCGC	3 cut(s)	840, 1354, 2078
GluI	GCNGC	7 cut(s)	37, 72, 105, 121, 280, 469, 1281
GsaI	CCCAGC	2 cut(s)	329, 2668
GsuI	CTGGAG	1 cut(s)	1544
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	9 cut(s)	5, 15, 55, 1453, 1552, 1671, 1978, 2508, 3039
HapII	CCGG	1 cut(s)	1356
HgaI	GACGC	1 cut(s)	2536
HhaI	GCGC	3 cut(s)	841, 1355, 2079
Hin1I	GRCGYC	1 cut(s)	1353
Hin6I	GCGC	3 cut(s)	839, 1353, 2077
HinP1I	GCGC	3 cut(s)	839, 1353, 2077
HincII	GTYRAC	1 cut(s)	239
HindII	GTYRAC	1 cut(s)	239
HindIII	AAGCTT	2 cut(s)	1456, 1984
HpaII	CCGG	1 cut(s)	1356
HphI	GGTGA	8 cut(s)	741, 998, 1024, 1236, 1724, 1739, 2804, 3041
Hpy166II	GTNNAC	3 cut(s)	239, 804, 2417
Hpy8I	GTNNAC	3 cut(s)	239, 804, 2417
HpyAV	CCTTC	7 cut(s)	66, 124, 197, 462, 1398, 2866, 2896
HpyCH4III	ACNGT	1 cut(s)	1845
HpyCH4IV	ACGT	2 cut(s)	2185, 2419
HpyF10VI	GCNNNNNNNGC	8 cut(s)	42, 335, 539, 611, 1277, 1549, 1625, 3059
HpyF3I	CTNAG	6 cut(s)	9, 63, 430, 2802, 3046, 3054
HpySE526I	ACGT	2 cut(s)	2185, 2419
Hsp92I	GRCGYC	1 cut(s)	1353
HspAI	GCGC	3 cut(s)	839, 1353, 2077
KasI	GGCGCC	1 cut(s)	1352
Ksp22I	TGATCA	2 cut(s)	2098, 2422
Kzo9I	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
LmnI	GCTCC	5 cut(s)	193, 1563, 2269, 2566, 2809
Lsp1109I	GCAGC	6 cut(s)	58, 107, 116, 291, 480, 1292
MaeI	CTAG	4 cut(s)	534, 2037, 2132, 2622
MaeII	ACGT	2 cut(s)	2185, 2419
MaeIII	GTNAC	4 cut(s)	1643, 1727, 2624, 2659
MalI	GATC	8 cut(s)	85, 478, 639, 1002, 1578, 2100, 2280, 2424
MbiI	CCGCTC	1 cut(s)	2806
MboI	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
MfeI	CAATTG	1 cut(s)	2738
MflI	RGATCY	5 cut(s)	83, 476, 637, 1000, 1576
MhlI	GDGCHC	2 cut(s)	190, 2814
MlsI	TGGCCA	3 cut(s)	5, 1671, 3039
MluNI	TGGCCA	3 cut(s)	5, 1671, 3039
Mly113I	GGCGCC	1 cut(s)	1353
MlyI	GAGTC	2 cut(s)	1132, 2752
MmeI	TCCRAC	2 cut(s)	978, 1895
Mox20I	TGGCCA	3 cut(s)	5, 1671, 3039
Mph1103I	ATGCAT	4 cut(s)	976, 1621, 2465, 2761
MroXI	GAANNNNTTC	5 cut(s)	1188, 1304, 1819, 2178, 2463
MscI	TGGCCA	3 cut(s)	5, 1671, 3039
MseI	TTAA	6 cut(s)	233, 275, 288, 1125, 1461, 2306
MslI	CAYNNNNRTG	7 cut(s)	23, 906, 954, 2535, 2754, 2793, 2967
Msp20I	TGGCCA	3 cut(s)	5, 1671, 3039
MspA1I	CMGCKG	1 cut(s)	2932
MspCI	CTTAAG	1 cut(s)	1124
MspI	CCGG	1 cut(s)	1356
MspR9I	CCNGG	5 cut(s)	563, 833, 1009, 1248, 1401
MunI	CAATTG	1 cut(s)	2738
Mva1269I	GAATGC	4 cut(s)	370, 1767, 2463, 2465
MvaI	CCWGG	5 cut(s)	563, 833, 1009, 1248, 1401
MvnI	CGCG	1 cut(s)	2547
MwoI	GCNNNNNNNGC	8 cut(s)	42, 335, 539, 611, 1277, 1549, 1625, 3059
NarI	GGCGCC	1 cut(s)	1353
NcoI	CCATGG	2 cut(s)	1414, 1504
NdeI	CATATG	1 cut(s)	1621
NdeII	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
NlaIV	GGNNCC	9 cut(s)	208, 436, 478, 522, 920, 1354, 1420, 1578, 1627
NmeAIII	GCCGAG	2 cut(s)	2004, 2281
NmuCI	GTSAC	2 cut(s)	1643, 1727
NsbI	TGCGCA	1 cut(s)	840
NsiI	ATGCAT	4 cut(s)	976, 1621, 2465, 2761
NspI	RCATGY	3 cut(s)	845, 2405, 2672
NspV	TTCGAA	1 cut(s)	128
PaeI	GCATGC	1 cut(s)	845
PaqCI	CACCTGC	1 cut(s)	321
PciI	ACATGT	1 cut(s)	2401
PctI	GAATGC	4 cut(s)	370, 1767, 2463, 2465
PdmI	GAANNNNTTC	5 cut(s)	1188, 1304, 1819, 2178, 2463
PfeI	GAWTC	8 cut(s)	113, 400, 935, 1162, 1251, 1300, 1791, 2618
PkrI	GCNGC	7 cut(s)	38, 73, 106, 122, 281, 470, 1282
PleI	GAGTC	2 cut(s)	1132, 2751
PluTI	GGCGCC	1 cut(s)	1356
PmaCI	CACGTG	1 cut(s)	2186
PmlI	CACGTG	1 cut(s)	2186
PpsI	GAGTC	2 cut(s)	1132, 2751
Ppu21I	YACGTR	2 cut(s)	2186, 2420
PpuMI	RGGWCCY	1 cut(s)	520
PscI	ACATGT	1 cut(s)	2401
PsiI	TTATAA	2 cut(s)	621, 2954
Psp124BI	GAGCTC	1 cut(s)	2814
Psp5II	RGGWCCY	1 cut(s)	520
Psp6I	CCWGG	5 cut(s)	561, 831, 1007, 1246, 1399
PspCI	CACGTG	1 cut(s)	2186
PspEI	GGTNACC	1 cut(s)	1727
PspFI	CCCAGC	2 cut(s)	325, 2664
PspGI	CCWGG	5 cut(s)	561, 831, 1007, 1246, 1399
PspN4I	GGNNCC	9 cut(s)	208, 436, 478, 522, 920, 1354, 1420, 1578, 1627
PspPI	GGNCC	7 cut(s)	13, 412, 520, 1451, 1550, 1976, 2875
PspPPI	RGGWCCY	1 cut(s)	520
PsrI	GAACNNNNNNTAC	2 cut(s)	190, 222
PstNI	CAGNNNCTG	1 cut(s)	3053
PsuI	RGATCY	5 cut(s)	83, 476, 637, 1000, 1576
RsaI	GTAC	7 cut(s)	168, 738, 854, 1268, 1699, 2418, 2736
RsaNI	GTAC	7 cut(s)	167, 737, 853, 1267, 1698, 2417, 2735
RseI	CAYNNNNRTG	7 cut(s)	23, 906, 954, 2535, 2754, 2793, 2967
SacI	GAGCTC	1 cut(s)	2814
SaqAI	TTAA	6 cut(s)	233, 275, 288, 1125, 1461, 2306
SatI	GCNGC	7 cut(s)	37, 72, 105, 121, 280, 469, 1281
Sau3AI	GATC	8 cut(s)	83, 476, 637, 1000, 1576, 2098, 2278, 2422
Sau96I	GGNCC	7 cut(s)	13, 412, 520, 1451, 1550, 1976, 2875
ScaI	AGTACT	1 cut(s)	1699
SchI	GAGTC	2 cut(s)	1132, 2752
ScrFI	CCNGG	5 cut(s)	563, 833, 1009, 1248, 1401
SduI	GDGCHC	2 cut(s)	190, 2814
SfcI	CTRYAG	3 cut(s)	912, 923, 2598
SfoI	GGCGCC	1 cut(s)	1354
SfuI	TTCGAA	1 cut(s)	128
SgrAI	CRCCGGYG	1 cut(s)	1355
SinI	GGWCC	3 cut(s)	412, 520, 2875
SmiMI	CAYNNNNRTG	7 cut(s)	23, 906, 954, 2535, 2754, 2793, 2967
SmlI	CTYRAG	5 cut(s)	492, 1124, 1630, 1938, 2637
SmoI	CTYRAG	5 cut(s)	492, 1124, 1630, 1938, 2637
SpeI	ACTAGT	1 cut(s)	2036
SphI	GCATGC	1 cut(s)	845
SsiI	CCGC	4 cut(s)	36, 984, 2806, 2932
SspDI	GGCGCC	1 cut(s)	1352
SspI	AATATT	1 cut(s)	1875
SspMI	CTAG	4 cut(s)	534, 2037, 2132, 2622
SstI	GAGCTC	1 cut(s)	2814
StyD4I	CCNGG	5 cut(s)	561, 831, 1007, 1246, 1399
StyI	CCWWGG	2 cut(s)	1414, 1504
TaaI	ACNGT	1 cut(s)	1845
TaiI	ACGT	2 cut(s)	2188, 2422
TaqII	GACCGA	1 cut(s)	2219
TatI	WGTACW	3 cut(s)	736, 1697, 2734
TauI	GCSGC	1 cut(s)	39
TfiI	GAWTC	8 cut(s)	113, 400, 935, 1162, 1251, 1300, 1791, 2618
Tru1I	TTAA	6 cut(s)	233, 275, 288, 1125, 1461, 2306
Tru9I	TTAA	6 cut(s)	233, 275, 288, 1125, 1461, 2306
TscAI	CASTG	4 cut(s)	13, 2098, 2149, 2946
TseFI	GTSAC	2 cut(s)	1643, 1727
TseI	GCWGC	6 cut(s)	71, 104, 120, 279, 468, 1280
Tsp45I	GTSAC	2 cut(s)	1643, 1727
TspGWI	ACGGA	1 cut(s)	404
TspRI	CASTG	4 cut(s)	13, 2098, 2149, 2946
Vha464I	CTTAAG	1 cut(s)	1124
VpaK11BI	GGWCC	3 cut(s)	412, 520, 2875
XapI	RAATTY	3 cut(s)	1497, 1735, 2175
XceI	RCATGY	3 cut(s)	845, 2405, 2672
XmiI	GTMKAC	1 cut(s)	803
XmnI	GAANNNNTTC	5 cut(s)	1188, 1304, 1819, 2178, 2463
XspI	CTAG	4 cut(s)	534, 2037, 2132, 2622
ZrmI	AGTACT	1 cut(s)	1699
Zsp2I	ATGCAT	4 cut(s)	976, 1621, 2465, 2761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.