Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009267

Physical Location & Seq

Genomic Coordinates Reverse (-)

2706280 .. 2717646

Gene Structure 11367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G037400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3255 bp

ATGGACGTCGAAATGGATACTTCTCCAAGCTTCTTCGACCCTGAAGATCTCTCAACCAGGGAGAAATTTCGTCGATACGGGAAAAGGCACTTGGGTTCAAACATATCTCCGCACCAAGAGAATTCAGCTTCAAAATTTAGTGAATCTTGGCTACTCTATGATGGGCTGAGTATACATAGCCCGACCAATGCTGCACTTCTTCTGGAAAATATCAAGCAAGAGGTTGAAAGCATTGATCCTTATCACTTGGAAGGAACTCCTGGAAAGACTCCTGTCTCAAAATGGAGGTCACCCATTGATGGGACAGAGGTGGATGTTGGTTCTGGTTTAGTCCACCATTCAATAAAATTGCTCAAGCAGGAGGAGGACTCACTGGCTGATGATGGAGATACAACCTTTGCTTTATTTGCTTCTCTACTTGATTCTGCTCTTCAAGGGTTGATGTCTTTTCCTGACTTGATACTAAGGTTTGAAGGATCCTGCCGAGATGTTTCAGAGTCAATTAGGTATGGTTCCAACATACGGCATCGTATAGTAGAGGACAAGTTGATGAGGCAGAAGGCTCAGCTCCTTCTTGATGAGGCTGCTTCATGGTCGCTCCTGTGGTACCTTTTTGGGAAAGGAAATCCATCGCTAACCTCTGAACTTTTTATGCTAGAACTGTTGCCCTCAACATCACACTTGGAGGCTTGCCAATTCGTCGCTGAGGACCATACGGCACAATTATGTCTACGGATTGTTCAATGGCTGGAAGGCTTAGCCTCCAAAGCACTTGACTTGGAAAGAAAGGTGCGAGGGTCTCATGTTGGTGCCTGTCTCCCAAGCTCTGGAATTTGGTACCATACTCAGTGCTATCTTAAGAAAGGAGCATCCAGTACAAATACGATTCATCACTTGGATTTTGATGCTCCAACACGTGAACATGCTCAACAATTACCTGATGACAAAAAACAAGATGAATCTCTTTTGGAAGATGTCTGGACTCTTTTAAGAGCTGGAAGACTGGAAGAGGCATGTCACCTTTGCCGATCTGCAGGACAGCCATGGAGAGCTGCAACTTTGTGCGTATTTGGAGGACTTGATCAGTTTCCTTCAATTGAAGCCCTGGTGAAAAATGGAAAGGATAGAACTTTGCAAGCCATTGAGTTGGAAAGTGGCATTGGCCACCAATGGCATCTGTGGAAGTGGGCTTCTTATTGTGCATCAGAGAAAATAGCGGAGCAAGATGCTGGTAAATATGAATCAGCAGTCTATGCAGCACAATGTAGCAATTTAAAGCGCATGCTTCCAATCTGTACTGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCATGGCTAGATGTTCAGCTGGATTTGGAATTGGCTCATTTAGAACCAGGAAGATTGGATCAATTTAAAAGCATTGGCAATGCAATTGATGGAAGTCCTGGACATAGTGATGGAGCTGTTCAGCCTTCAAATGGACCAGGAATTTGGCCACTCCAAGTTTTGAACCAGCAACCACGACAACTTTCTGATCTTCTTCAGAAACTTCATTCCGGGGAAATGGTCCATGAAAGTGTTACTCGAGGATGCAAGGAGCAGCAACGCCAAATTGAGATGATTCTAATGTTAGGGGATATTGCACGATTGCTAGACCTTATATGGTCATGGATAGCACCTTCAGAAGATGATCAGAATGTCTTCAGGCCTCATGGAGATCCTCAGATGATTCGATTTGGTGCTCATCTAGTGCTTGTGCTCAGATACTTACTTGGTGATGAAATGGATGCTTTCAGAGAGAAAATTATGAATGTTGGTGATCTCATTGTACACATGTATGCCATGTTTTTGTTTTCCAAGCAACATGAGGAGTTGGTGGGTATATATGCTTCTCAACTTGCACGCCACCGATGCATTGACCTCTTTGTGCACATGATGGAACTGAGGCTGAACAGCAGTGTGCATGTCAAATATAAGATCTTCCTTTCTGCTATGGAGTATTTACAATTTTCCCCTGTGGACAACTCGAAAGGAAGTTTTGAAGAAATTGTTGAGAGGGTTTTGTCAAGATCCCGGGAAATCAAAGTTGGTAAGTATGATAAGCTATCAGATGTTGCAGAGCAGCACCGGCTGCAGAGCCTTCCGAAAGCTATGGTTATCCAGTGGCTCTGCTTCACACCCCCCTCCACAATTACTAATGTTGAGGATGTCAGTACAAAACTTCTTCTGAGAGCTTTGATGCACAGCAACATATTGTTCCGGGAGTTTGCCCTGGTTTCAATGTGGAGAGTTCCTGCAATGCCCATTGGTGCTCACACATTACTTAGTTTTCTTGCTGAACCTTTGAAGCAACTTTCAGAATCTTCTGATAGCTTGGAGGATTACAATGTTTCTCAGAACCTGGAAGAGTTCCATGATTGGAGTGAGTATTATTCTTGTGATGCAAAATATCGCAATTGGCTCAAAATTGAATTAGAGAATGCAGAGGTTTCTCCACTTGAACTCTCAATGGAGGAAAAACAAAGGGCTATTTTATCAGCCAAGGAGACAGTGAATTCGTCTTTGTCATTGTTATTGAGAAAAGAAAATCCTTGGTTAGCTCCTGGTGAAGATCATGTGTACGAATCTGTGGAACCTATTTTTCTTGAATTGCATGCCACTGCAATGCTTTGCTTGCGTTCCGGTGAATGCTTGCCTCCAGATGCAACTGTGTGCGCTACTTTAATGAGTGCTCTTTACTCTTCAGTGAGCGAGCAAGATGTGTTAAATCGGCAACTAATGATAAATGTCTCCATATCCTCAAAGGACAGTTACTGCATAGAGGTTGTGCTTCGCTGCTTGGCAGTTGCAGGTGATGGTCTTGGGCAACAGGAACACAATGATGGTGGTATTCTTAGTACTGTTATGGCTGCTGGCTTCAAAGGTGAGCTGCTTCGATTTCAATCTGGAGTCACAATGGAGATTTCCCGATTAGATGCCTGGTATTCGAGCAAAGGTGGTTCCTTAGAGAGCCCAGCAACATACATTGTGCAGGGCCTTTGTCGTAGGTGCTGTATTCCAGAAGTCATTCTTCGGTGCATGGAGGTCTCTCTTTCGCTTATAGAGTTGGGTATGCCACCTGAAGGTCATGATCAGTTGATTGGCTTAGTTGCTTCGTCCGAGGCTGGGGTTCTTCATTTGTTTAGTTACCAACAATTGCAGGAATTTTTATTGGTTGAAAGGGAATACTCCATAAGGCAAATGGAGCTTGAAGAGGAGCTTTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0000973 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006355 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016043 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031326 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0046931 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051292 GO:0051641 GO:0051649 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup84_Nup100

Protein Analysis

1085

Amino Acids

122.11

Weight (kDa)

5.15

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14120 AT3G14120 AT3G14120
fragaria_vesca	FvH4_6g35170 FvH4_6g35170
malus_domestica	MD09G1178100.v1.1 MD17G1148600.v1.1
prunus_persica	Prupe.3G037400_v2.0.a1 Prupe.3G037400_v2.0.a1
pyrus_communis	pycom09g09650 pycom17g14190
rosa_chinensis	RchiOBHm_Chr2g0146431
rosa_laevigata	RLG00000020200
rosa_multiflora	Rmu_sc0001986.1_g000003 Rmu_sc0030037.1_g000003
rosa_roxburghii	Rroxscaffold_2G00100100
rosa_rugosa	Rorug02G0394300
rosa_samantha	Rh2AG451100 Rh2BG463600 Rh2CG437900 Rh2DG472600
rosa_wichuraiana	Rw2G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2825
AatII	GACGTC	1 cut(s)	9
Acc36I	ACCTGC	1 cut(s)	2825
Acc65I	GGTACC	2 cut(s)	606, 837
AccB1I	GGYRCC	3 cut(s)	606, 809, 837
AccB7I	CCANNNNNTGG	1 cut(s)	827
AccI	GTMKAC	2 cut(s)	172, 730
AciI	CCGC	2 cut(s)	110, 1217
AclWI	GGATC	6 cut(s)	230, 471, 484, 1398, 1697, 2049
AcoI	YGGCCR	2 cut(s)	1162, 1478
AcsI	RAATTY	7 cut(s)	65, 121, 134, 831, 1473, 2539, 3188
AcuI	CTGAAG	6 cut(s)	63, 1511, 1650, 1672, 2712, 3126
AcvI	CACGTG	1 cut(s)	917
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	8 cut(s)	608, 839, 877, 1297, 1815, 2200, 2606, 2884
AfiI	CCNNNNNNNGG	7 cut(s)	299, 300, 522, 827, 1463, 3107, 3150
AflII	CTTAAG	1 cut(s)	857
AflIII	ACRYGT	2 cut(s)	914, 1818
AhdI	GACNNNNNGTC	1 cut(s)	1306
AjuI	GAANNNNNNNTTGG	6 cut(s)	74, 106, 1143, 1175, 2055, 2087
Alw21I	GWGCWC	5 cut(s)	1729, 1746, 1917, 2299, 2719
Alw26I	GTCTC	6 cut(s)	280, 804, 821, 2525, 2779, 3076
Alw44I	GTGCAC	1 cut(s)	1913
AlwI	GGATC	6 cut(s)	230, 471, 484, 1398, 1697, 2049
AlwNI	CAGNNNCTG	2 cut(s)	2386, 2799
Ama87I	CYCGRG	2 cut(s)	1569, 2058
AoxI	GGCC	4 cut(s)	1162, 1478, 1691, 3019
ApaLI	GTGCAC	1 cut(s)	1913
ApoI	RAATTY	7 cut(s)	65, 121, 134, 831, 1473, 2539, 3188
ArsI	GACNNNNNNTTYG	6 cut(s)	272, 304, 1458, 1490, 2524, 2556
Asp700I	GAANNNNTTC	2 cut(s)	1685, 3051
Asp718I	GGTACC	2 cut(s)	606, 837
AspLEI	GCGC	2 cut(s)	1281, 2702
AspS9I	GGNCC	4 cut(s)	709, 1466, 1552, 3019
AsuC2I	CCSGG	4 cut(s)	1543, 2059, 2060, 2246
AsuHPI	GGTGA	9 cut(s)	282, 1010, 1120, 1772, 1814, 2603, 2681, 2849, 2921
AvaI	CYCGRG	2 cut(s)	1569, 2058
AvaII	GGWCC	3 cut(s)	709, 1466, 1552
BaeGI	GKGCMC	1 cut(s)	1917
BaeI	ACNNNNGTAYC	2 cut(s)	452, 485
BalI	TGGCCA	2 cut(s)	1164, 1480
BamHI	GGATCC	1 cut(s)	476
BanI	GGYRCC	3 cut(s)	606, 809, 837
BanII	GRGCYC	1 cut(s)	2999
BarI	GAAGNNNNNNTAC	2 cut(s)	1858, 1890
BbrPI	CACGTG	1 cut(s)	917
BbsI	GAAGAC	2 cut(s)	1006, 1678
Bbv12I	GWGCWC	5 cut(s)	1729, 1746, 1917, 2299, 2719
BbvCI	CCTCAGC	1 cut(s)	705
BccI	CCATC	9 cut(s)	155, 293, 377, 637, 1415, 1436, 1915, 2834, 2861
BceAI	ACGGC	2 cut(s)	539, 732
BciVI	GTATCC	1 cut(s)	10
BclI	TGATCA	3 cut(s)	1081, 1675, 3115
BcnI	CCSGG	4 cut(s)	1543, 2059, 2060, 2246
BcoDI	GTCTC	6 cut(s)	280, 804, 821, 2525, 2779, 3076
BfaI	CTAG	4 cut(s)	656, 1340, 1637, 1733
BfmI	CTRYAG	2 cut(s)	1032, 2117
BfrI	CTTAAG	1 cut(s)	857
BfuAI	ACCTGC	1 cut(s)	2825
BfuI	GTATCC	1 cut(s)	10
BglII	AGATCT	2 cut(s)	46, 1962
BlpI	GCTNAGC	2 cut(s)	564, 757
BmcAI	AGTACT	1 cut(s)	2884
Bme18I	GGWCC	3 cut(s)	709, 1466, 1552
BmeRI	GACNNNNNGTC	1 cut(s)	1306
BmeT110I	CYCGRG	2 cut(s)	1569, 2058
BmgT120I	GGNCC	4 cut(s)	709, 1466, 1552, 3019
BmiI	GGNNCC	7 cut(s)	478, 514, 608, 811, 839, 2619, 2986
BmrI	ACTGGG	1 cut(s)	1312
BmuI	ACTGGG	1 cut(s)	1312
BoxI	GACNNNNGTC	1 cut(s)	272
BpiI	GAAGAC	2 cut(s)	1006, 1678
BplI	GAGNNNNNCTC	2 cut(s)	353, 385
BpmI	CTGGAG	2 cut(s)	2667, 2952
Bpu10I	CCTNAGC	1 cut(s)	705
Bpu1102I	GCTNAGC	2 cut(s)	564, 757
BpuEI	CTTGAG	1 cut(s)	338
BpuMI	CCSGG	4 cut(s)	1543, 2059, 2060, 2246
BsaAI	YACGTR	1 cut(s)	917
BsaBI	GATNNNNATC	2 cut(s)	240, 2926
BsaHI	GRCGYC	1 cut(s)	6
BsaI	GGTCTC	2 cut(s)	804, 3076
BsaJI	CCNNGG	9 cut(s)	57, 1043, 1104, 1542, 2058, 2256, 2526, 2576, 3144
BsaWI	WCCGGW	1 cut(s)	2666
Bsc4I	CCNNNNNNNGG	7 cut(s)	299, 300, 522, 827, 1463, 3107, 3150
Bse118I	RCCGGY	1 cut(s)	2112
Bse1I	ACTGG	5 cut(s)	378, 873, 1008, 1307, 2146
Bse3DI	GCAATG	4 cut(s)	1329, 1417, 2289, 2655
Bse8I	GATNNNNATC	2 cut(s)	240, 2926
BseDI	CCNNGG	9 cut(s)	57, 1043, 1104, 1542, 2058, 2256, 2526, 2576, 3144
BseGI	GGATG	5 cut(s)	319, 869, 1580, 1777, 2197
BseJI	GATNNNNATC	2 cut(s)	240, 2926
BseLI	CCNNNNNNNGG	7 cut(s)	299, 300, 522, 827, 1463, 3107, 3150
BseMI	GCAATG	4 cut(s)	1329, 1417, 2289, 2655
BseMII	CTCAG	9 cut(s)	158, 578, 696, 860, 1721, 1759, 1919, 2204, 2393
BseNI	ACTGG	5 cut(s)	378, 873, 1008, 1307, 2146
BseRI	GAGGAG	3 cut(s)	377, 1868, 3254
BseSI	GKGCMC	1 cut(s)	1917
BseYI	CCCAGC	3 cut(s)	1317, 2998, 3149
BsgI	GTGCAG	2 cut(s)	177, 3035
BshFI	GGCC	4 cut(s)	1164, 1480, 1693, 3021
BshNI	GGYRCC	3 cut(s)	606, 809, 837
BsiHKAI	GWGCWC	5 cut(s)	1729, 1746, 1917, 2299, 2719
BsiHKCI	CYCGRG	2 cut(s)	1569, 2058
BsiSI	CCGG	5 cut(s)	1542, 2059, 2113, 2245, 2667
BslFI	GGGAC	1 cut(s)	316
BslI	CCNNNNNNNGG	7 cut(s)	299, 300, 522, 827, 1463, 3107, 3150
BsmAI	GTCTC	6 cut(s)	280, 804, 821, 2525, 2779, 3076
BsmFI	GGGAC	1 cut(s)	316
BsmI	GAATGC	2 cut(s)	2470, 2678
BsnI	GGCC	4 cut(s)	1164, 1480, 1693, 3021
Bso31I	GGTCTC	2 cut(s)	804, 3076
BsoBI	CYCGRG	2 cut(s)	1569, 2058
Bsp1286I	GDGCHC	6 cut(s)	1729, 1746, 1917, 2299, 2719, 2999
Bsp1407I	TGTACA	1 cut(s)	1813
Bsp1720I	GCTNAGC	2 cut(s)	564, 757
Bsp19I	CCATGG	1 cut(s)	1043
BspACI	CCGC	2 cut(s)	110, 1217
BspANI	GGCC	4 cut(s)	1164, 1480, 1693, 3021
BspCNI	CTCAG	9 cut(s)	159, 577, 697, 859, 1720, 1758, 1920, 2205, 2392
BspHI	TCATGA	1 cut(s)	3112
BspLI	GGNNCC	7 cut(s)	478, 514, 608, 811, 839, 2619, 2986
BspMAI	CTGCAG	2 cut(s)	1036, 2121
BspMI	ACCTGC	1 cut(s)	2825
BspPI	GGATC	6 cut(s)	230, 471, 484, 1398, 1697, 2049
BspQI	GCTCTTC	1 cut(s)	435
BspT107I	GGYRCC	3 cut(s)	606, 809, 837
BspTI	CTTAAG	1 cut(s)	857
BspTNI	GGTCTC	2 cut(s)	804, 3076
BsrDI	GCAATG	4 cut(s)	1329, 1417, 2289, 2655
BsrFI	RCCGGY	1 cut(s)	2112
BsrGI	TGTACA	1 cut(s)	1813
BsrI	ACTGG	5 cut(s)	378, 873, 1008, 1307, 2146
BssAI	RCCGGY	1 cut(s)	2112
BssECI	CCNNGG	9 cut(s)	57, 1043, 1104, 1542, 2058, 2256, 2526, 2576, 3144
BssNAI	GTATAC	1 cut(s)	173
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	3 cut(s)	1043, 2526, 2576
Bst1107I	GTATAC	1 cut(s)	173
Bst4CI	ACNGT	5 cut(s)	663, 2536, 2695, 2795, 2887
Bst6I	CTCTTC	5 cut(s)	435, 1002, 2385, 2731, 3231
BstACI	GRCGYC	1 cut(s)	6
BstAFI	CTTAAG	1 cut(s)	857
BstAPI	GCANNNNNTGC	2 cut(s)	1253, 2116
BstAUI	TGTACA	1 cut(s)	1813
BstBAI	YACGTR	1 cut(s)	917
BstDSI	CCRYGG	1 cut(s)	1043
BstEII	GGTNACC	1 cut(s)	288
BstF5I	GGATG	5 cut(s)	319, 869, 1580, 1777, 2197
BstHHI	GCGC	2 cut(s)	1281, 2702
BstMAI	GTCTC	6 cut(s)	280, 804, 821, 2525, 2779, 3076
BstMWI	GCNNNNNNNGC	9 cut(s)	407, 767, 1253, 1319, 1896, 2113, 2116, 2659, 3229
BstNSI	RCATGY	7 cut(s)	926, 1017, 1285, 1317, 1822, 1952, 2642
BstPAI	GACNNNNGTC	1 cut(s)	272
BstPI	GGTNACC	1 cut(s)	288
BstSFI	CTRYAG	2 cut(s)	1032, 2117
BstSLI	GKGCMC	1 cut(s)	1917
BstV2I	GAAGAC	2 cut(s)	1006, 1678
BstX2I	RGATCY	5 cut(s)	46, 476, 1702, 1962, 2054
BstXI	CCANNNNNNTGG	2 cut(s)	1147, 1476
BstYI	RGATCY	5 cut(s)	46, 476, 1702, 1962, 2054
BstZ17I	GTATAC	1 cut(s)	173
BsuI	GTATCC	1 cut(s)	10
BsuRI	GGCC	4 cut(s)	1164, 1480, 1693, 3021
BtgI	CCRYGG	1 cut(s)	1043
BtgZI	GCGATG	1 cut(s)	615
BtsCI	GGATG	5 cut(s)	319, 869, 1580, 1777, 2197
BtsI	GCAGTG	2 cut(s)	1948, 2643
BtsIMutI	CAGTG	7 cut(s)	371, 854, 1948, 2153, 2541, 2643, 2736
BveI	ACCTGC	1 cut(s)	2825
CaiI	CAGNNNCTG	2 cut(s)	2386, 2799
CciI	TCATGA	1 cut(s)	3112
CfoI	GCGC	2 cut(s)	1281, 2702
Cfr10I	RCCGGY	1 cut(s)	2112
Cfr13I	GGNCC	4 cut(s)	709, 1466, 1552, 3019
Cfr9I	CCCGGG	1 cut(s)	2058
Csp6I	GTAC	8 cut(s)	607, 838, 876, 1296, 1814, 2199, 2605, 2883
CspCI	CAANNNNNGTGG	2 cut(s)	2851, 2886
CviQI	GTAC	8 cut(s)	607, 838, 876, 1296, 1814, 2199, 2605, 2883
DraI	TTTAAA	2 cut(s)	1275, 1399
DriI	GACNNNNNGTC	1 cut(s)	1306
EaeI	YGGCCR	2 cut(s)	1162, 1478
Eam1104I	CTCTTC	5 cut(s)	435, 1002, 2385, 2731, 3231
Eam1105I	GACNNNNNGTC	1 cut(s)	1306
EarI	CTCTTC	5 cut(s)	435, 1002, 2385, 2731, 3231
Eco130I	CCWWGG	3 cut(s)	1043, 2526, 2576
Eco147I	AGGCCT	1 cut(s)	1693
Eco24I	GRGCYC	1 cut(s)	2999
Eco31I	GGTCTC	2 cut(s)	804, 3076
Eco47I	GGWCC	3 cut(s)	709, 1466, 1552
Eco57I	CTGAAG	6 cut(s)	63, 1511, 1650, 1672, 2712, 3126
Eco72I	CACGTG	1 cut(s)	917
Eco88I	CYCGRG	2 cut(s)	1569, 2058
Eco91I	GGTNACC	1 cut(s)	288
EcoO109I	RGGNCCY	1 cut(s)	3019
EcoO65I	GGTNACC	1 cut(s)	288
EcoRI	GAATTC	2 cut(s)	121, 2539
EcoT14I	CCWWGG	3 cut(s)	1043, 2526, 2576
EcoT22I	ATGCAT	1 cut(s)	1901
EcoT38I	GRGCYC	1 cut(s)	2999
ErhI	CCWWGG	3 cut(s)	1043, 2526, 2576
FalI	AAGNNNNNCTT	3 cut(s)	3039, 3071, 3228
FaqI	GGGAC	1 cut(s)	316
FbaI	TGATCA	3 cut(s)	1081, 1675, 3115
FblI	GTMKAC	2 cut(s)	172, 730
FokI	GGATG	5 cut(s)	326, 856, 1587, 1784, 2204
FriOI	GRGCYC	1 cut(s)	2999
FspBI	CTAG	4 cut(s)	656, 1340, 1637, 1733
GlaI	GCGC	2 cut(s)	1280, 2701
GsaI	CCCAGC	3 cut(s)	1321, 3002, 3153
GsuI	CTGGAG	2 cut(s)	2667, 2952
HaeIII	GGCC	4 cut(s)	1164, 1480, 1693, 3021
HapII	CCGG	5 cut(s)	1542, 2059, 2113, 2245, 2667
HhaI	GCGC	2 cut(s)	1281, 2702
Hin1I	GRCGYC	1 cut(s)	6
Hin6I	GCGC	2 cut(s)	1279, 2700
HinP1I	GCGC	2 cut(s)	1279, 2700
HindIII	AAGCTT	1 cut(s)	28
HpaII	CCGG	5 cut(s)	1542, 2059, 2113, 2245, 2667
HphI	GGTGA	9 cut(s)	282, 1010, 1120, 1772, 1814, 2603, 2681, 2849, 2921
Hpy166II	GTNNAC	8 cut(s)	173, 334, 731, 920, 1816, 1915, 2005, 2605
Hpy8I	GTNNAC	8 cut(s)	173, 334, 731, 920, 1816, 1915, 2005, 2605
Hpy99I	CGWCG	3 cut(s)	11, 75, 704
HpyCH4III	ACNGT	5 cut(s)	663, 2536, 2695, 2795, 2887
HpyCH4IV	ACGT	2 cut(s)	6, 916
HpyF10VI	GCNNNNNNNGC	9 cut(s)	407, 767, 1253, 1319, 1896, 2113, 2116, 2659, 3229
HpySE526I	ACGT	2 cut(s)	6, 916
Hsp92I	GRCGYC	1 cut(s)	6
HspAI	GCGC	2 cut(s)	1279, 2700
KpnI	GGTACC	2 cut(s)	610, 841
Ksp22I	TGATCA	3 cut(s)	1081, 1675, 3115
LguI	GCTCTTC	1 cut(s)	435
MaeI	CTAG	4 cut(s)	656, 1340, 1637, 1733
MaeII	ACGT	2 cut(s)	6, 916
MaeIII	GTNAC	6 cut(s)	288, 1016, 1564, 2795, 2935, 3170
MfeI	CAATTG	4 cut(s)	1095, 1416, 2440, 3179
MflI	RGATCY	5 cut(s)	46, 476, 1702, 1962, 2054
MhlI	GDGCHC	6 cut(s)	1729, 1746, 1917, 2299, 2719, 2999
MlsI	TGGCCA	2 cut(s)	1164, 1480
MluNI	TGGCCA	2 cut(s)	1164, 1480
MlyI	GAGTC	6 cut(s)	262, 362, 506, 976, 1316, 2943
MmeI	TCCRAC	3 cut(s)	540, 935, 1128
Mox20I	TGGCCA	2 cut(s)	1164, 1480
Mph1103I	ATGCAT	1 cut(s)	1901
MroXI	GAANNNNTTC	2 cut(s)	1685, 3051
MscI	TGGCCA	2 cut(s)	1164, 1480
MseI	TTAA	6 cut(s)	858, 989, 1274, 1398, 2708, 2750
MslI	CAYNNNNRTG	7 cut(s)	724, 807, 1440, 1560, 1821, 2648, 2865
Msp20I	TGGCCA	2 cut(s)	1164, 1480
MspA1I	CMGCKG	1 cut(s)	1351
MspCI	CTTAAG	1 cut(s)	857
MspI	CCGG	5 cut(s)	1542, 2059, 2113, 2245, 2667
MunI	CAATTG	4 cut(s)	1095, 1416, 2440, 3179
Mva1269I	GAATGC	2 cut(s)	2470, 2678
MwoI	GCNNNNNNNGC	9 cut(s)	407, 767, 1253, 1319, 1896, 2113, 2116, 2659, 3229
NciI	CCSGG	4 cut(s)	1543, 2059, 2060, 2246
NcoI	CCATGG	1 cut(s)	1043
NlaIV	GGNNCC	7 cut(s)	478, 514, 608, 811, 839, 2619, 2986
NmeAIII	GCCGAG	1 cut(s)	509
NmuCI	GTSAC	3 cut(s)	288, 1016, 2935
NsiI	ATGCAT	1 cut(s)	1901
NspI	RCATGY	7 cut(s)	926, 1017, 1285, 1317, 1822, 1952, 2642
PaeI	GCATGC	3 cut(s)	1285, 1317, 2642
PaeR7I	CTCGAG	1 cut(s)	1569
PagI	TCATGA	1 cut(s)	3112
PaqCI	CACCTGC	1 cut(s)	2825
PceI	AGGCCT	1 cut(s)	1693
PciI	ACATGT	1 cut(s)	1818
PciSI	GCTCTTC	1 cut(s)	435
PctI	GAATGC	2 cut(s)	2470, 2678
PdmI	GAANNNNTTC	2 cut(s)	1685, 3051
PfeI	GAWTC	9 cut(s)	143, 422, 886, 959, 1241, 1606, 1714, 2345, 2609
PflMI	CCANNNNNTGG	1 cut(s)	827
PfoI	TCCNGGA	3 cut(s)	259, 1429, 2244
PleI	GAGTC	6 cut(s)	262, 362, 505, 976, 1315, 2942
PmaCI	CACGTG	1 cut(s)	917
PmlI	CACGTG	1 cut(s)	917
PpsI	GAGTC	6 cut(s)	262, 362, 505, 976, 1315, 2942
Ppu21I	YACGTR	1 cut(s)	917
PscI	ACATGT	1 cut(s)	1818
PshAI	GACNNNNGTC	1 cut(s)	272
PspCI	CACGTG	1 cut(s)	917
PspEI	GGTNACC	1 cut(s)	288
PspFI	CCCAGC	3 cut(s)	1317, 2998, 3149
PspN4I	GGNNCC	7 cut(s)	478, 514, 608, 811, 839, 2619, 2986
PspPI	GGNCC	4 cut(s)	709, 1466, 1552, 3019
PspXI	VCTCGAGB	1 cut(s)	1569
PstI	CTGCAG	2 cut(s)	1036, 2121
PstNI	CAGNNNCTG	2 cut(s)	2386, 2799
PsuI	RGATCY	5 cut(s)	46, 476, 1702, 1962, 2054
PvuII	CAGCTG	1 cut(s)	1351
RsaI	GTAC	8 cut(s)	608, 839, 877, 1297, 1815, 2200, 2606, 2884
RsaNI	GTAC	8 cut(s)	607, 838, 876, 1296, 1814, 2199, 2605, 2883
RseI	CAYNNNNRTG	7 cut(s)	724, 807, 1440, 1560, 1821, 2648, 2865
SapI	GCTCTTC	1 cut(s)	435
SaqAI	TTAA	6 cut(s)	858, 989, 1274, 1398, 2708, 2750
Sau96I	GGNCC	4 cut(s)	709, 1466, 1552, 3019
ScaI	AGTACT	1 cut(s)	2884
SchI	GAGTC	6 cut(s)	262, 362, 506, 976, 1316, 2943
SduI	GDGCHC	6 cut(s)	1729, 1746, 1917, 2299, 2719, 2999
SfcI	CTRYAG	2 cut(s)	1032, 2117
Sfr274I	CTCGAG	1 cut(s)	1569
SinI	GGWCC	3 cut(s)	709, 1466, 1552
SlaI	CTCGAG	1 cut(s)	1569
SmaI	CCCGGG	1 cut(s)	2060
SmiMI	CAYNNNNRTG	7 cut(s)	724, 807, 1440, 1560, 1821, 2648, 2865
SmlI	CTYRAG	3 cut(s)	353, 857, 1569
SmoI	CTYRAG	3 cut(s)	353, 857, 1569
SphI	GCATGC	3 cut(s)	1285, 1317, 2642
SseBI	AGGCCT	1 cut(s)	1693
SsiI	CCGC	2 cut(s)	110, 1217
SspMI	CTAG	4 cut(s)	656, 1340, 1637, 1733
StuI	AGGCCT	1 cut(s)	1693
StyI	CCWWGG	3 cut(s)	1043, 2526, 2576
TaaI	ACNGT	5 cut(s)	663, 2536, 2695, 2795, 2887
TaiI	ACGT	2 cut(s)	9, 919
TaqI	TCGA	8 cut(s)	9, 36, 73, 1570, 1717, 2012, 2920, 2972
TatI	WGTACW	5 cut(s)	875, 1295, 1813, 2198, 2882
TfiI	GAWTC	9 cut(s)	143, 422, 886, 959, 1241, 1606, 1714, 2345, 2609
Tru1I	TTAA	6 cut(s)	858, 989, 1274, 1398, 2708, 2750
Tru9I	TTAA	6 cut(s)	858, 989, 1274, 1398, 2708, 2750
TscAI	CASTG	7 cut(s)	378, 854, 1948, 2153, 2541, 2650, 2736
TseFI	GTSAC	3 cut(s)	288, 1016, 2935
Tsp45I	GTSAC	3 cut(s)	288, 1016, 2935
TspDTI	ATGAA	9 cut(s)	579, 878, 972, 1254, 1526, 1572, 1779, 1808, 3149
TspGWI	ACGGA	1 cut(s)	748
TspMI	CCCGGG	1 cut(s)	2058
TspRI	CASTG	7 cut(s)	378, 854, 1948, 2153, 2541, 2650, 2736
Van91I	CCANNNNNTGG	1 cut(s)	827
Vha464I	CTTAAG	1 cut(s)	857
VneI	GTGCAC	1 cut(s)	1913
VpaK11BI	GGWCC	3 cut(s)	709, 1466, 1552
XapI	RAATTY	7 cut(s)	65, 121, 134, 831, 1473, 2539, 3188
XceI	RCATGY	7 cut(s)	926, 1017, 1285, 1317, 1822, 1952, 2642
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3223
XhoI	CTCGAG	1 cut(s)	1569
XmaI	CCCGGG	1 cut(s)	2058
XmiI	GTMKAC	2 cut(s)	172, 730
XmnI	GAANNNNTTC	2 cut(s)	1685, 3051
XspI	CTAG	4 cut(s)	656, 1340, 1637, 1733
ZraI	GACGTC	1 cut(s)	7
ZrmI	AGTACT	1 cut(s)	2884
Zsp2I	ATGCAT	1 cut(s)	1901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.