Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009267

Physical Location & Seq

Genomic Coordinates Forward (+)

11736732 .. 11744583

Gene Structure 7852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g14190.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGGTGCGGGGGTCTCATGTCGGTGCCTGTCTCCCAAGCTCTGGAATTTGGTATCATACTCAATGCTATCTTAAGAAAGGAGCCTCCAGTACAAATACCGTTCATCACCTGGATTTTGATGCTCCAACACGTGAACATGCTCAACTACTACCTGATGACAAAAAACAAGATGAATCTCTGTTGGAAGATGTCTGGACTCTTTTAAGAGCTGGAAGACGGGAAGAGGCATGTCACCTTTGCCGGTCTGTGGGACAGCCATGGAGAGCTGCAACTTTGTGCGTATTTGGAGGAATTGATGAGTTTCCGTCAGTTGAAGCCGTGGTGAAAAATGGAAAGAAGAGAACTTTGCAAGCCATTGAGTTAGAAAGTGGCATTGGCCACCAATGGCATCTGTGGAAATGGGCATCATATTGTGCATCAGAGGTAGGGTTGAAAGGATTTAGGAACATAAAATTCTGTCCTTTTGTATGGATTTCATACATTAAAATAGCTAAGCAAGATGCTGGGAAATATGAAGCAGCAGTGTATGCAGCACAATGTAGTAATTTAAGGCGCATGCTTCCAATCTGCACTGACTGGGAGTCAGCATGCTGGGCTATGGCAAAATCATGGTTAGATGTTCAGGTGGATTTGGAATTGGCTCATTTGGAACCAGGAAGAATGGATCAATTTAAAAGCATTGGAGATGAAATTGATGGAAGTCCTGGACATATTGACAGAGCTGTTCAGCCTTCAAATGGACCAGGAATTTGGCCGCTCCAAGTTTTGAACCAACAACCACAACAACTTTCAGATCTACTCCAGAAACTTCAATCAGGGGAATTAGTTCATGAAAGTGTTACTCGAGGATGCAAGGAGCAGCAACGTCAAATTGAGATGAAACTAATGTTAGGAGATATCTCACAATTGCTGGACCTTATATGGTCATGGATAGCCCCTTCAGAAGATGATCAGAGTTTCTTCAGGCCCCATGGAGATCCTCAGATGATTCGATTTGGTGCTCATCTAGTGCTTGTGCTTAGATATTTACTTGATGATGAAAATAAGGATACTTTGAGAGAGAAGATTATGAATGTTGGTGATCTCATTGTACACATGTATGCCATGTTTCTGTTTTCCAAGCAACACGAGGAGTTGGTGGGTATATATGCTTCTCAACTTGCACGCCACCGTTGCATTGACCTCTTTGTGCACATGATGGAACTGAGGCTAAACAGCAGTGTGCATGTCAAATATAAGATCTTCCTTTCTGCTATGGGGTATTTACAATTTTCTCCCGTGGACAACTCAAAAGGAAGTTTTGAAGAAATTGTTGAGAGGGTTATGTCAAGATCTCGGGAAATGAAAGTTGGCAAGTATGATAAGTTATCAGATGTTGCAGAGCAGCACCGGCTGCAGAGCCTTCCGAAAGCTATGGTTGTCCAGTGGCTATGCTTTACACCCCCCTCAACCGTTACTAATGTTGAGGATGTCAGTACAAAACTTCTTCTACGAGCTTTGATACACAGCAACATATTGTTCCGGGAGTTTGCCCTGGTTTCAATGTGGAGAGTTCCTGCAATGCCCATTGGTGCTCACACATTACTTAGTTTCCTTGCTGAACCTTTAAAGCAACTTTCAGAATCTTCTAATACCTTGGAGAATTACAATGTGTCTCAGAACCTCAAAGAGTTCCACGATTGGAGTGAGTATTATTCTTGTGATGCAAAATATCGCAGCTGGCTCAAAATTGAATTAGAGAATGCAGAGGTTTCTCCTCTTGAACTCTCAATGGAGGAAAAACAAAGGGCCGTTTCAGCAGCCAATGAGACTCTGAATTCATCTCTGTCATTGTTACTGAGAACTGAAAATCCTTGGTTAGCTTCAGCTCAAGATCATTTGTACGAATCTGTGGAACCTATATTTCTTGAATTGCACGCCACCGCAATGCTTTGCTTGCCATCTGGTGAATGTCTGCCTCCAGATGCAACCGTGTGCACTACATTGATGAGTGCTCTTTACTCTTCAGTGAGCGAGGAAGATGTGTTGCATAGGCAACTAATGATAAATGTCACCATATCCTCAAAGGACAATTACTGTGTAGAGGTTGTGCTTCGCTGCTTGGCAGTGGCAGGTGATGGTCTTGGGCCTCGGGAACACACTGATGGGGGTCTTCTTGGTACTGTTATGGCTGCTGGCTTCAAAGGTGAGTTGCTTCGTTTTCAAGCTGGAGTTACCATCGAGATTTCCCGAATAGATGCTTGGTATTCGAGCAAAGAAGGTTCCCTAGAGAGCCCAGCAACATACATTGTGTGGGGCCTTTGTCGTAGGTGCTGTATTCCAGAAGTCATTCTTCGATGCATGCAGGTCTCTCTTTCGCTTATAGAGTTGGGTGTTCCACCTGAAAGCCATGATCAGTTGATTGAATTAGTTGCTAGCTCCGAAGCTGGGGTCCTTCATTTGTTTAGTCACCAACAATTGCAAGAGTTTTTGTTGTTTGAGAGGGAATACTCCATAAGCCAAATGGAGCTTGAAGAGGAGCTTTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0000973 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006355 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016043 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031326 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0046931 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051292 GO:0051641 GO:0051649 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup84_Nup100

Protein Analysis

844

Amino Acids

95.33

Weight (kDa)

5.42

Isoelectric Point (pI)

52.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14120 AT3G14120 AT3G14120
fragaria_vesca	FvH4_6g35170 FvH4_6g35170
malus_domestica	MD09G1178100.v1.1 MD17G1148600.v1.1
prunus_persica	Prupe.3G037400_v2.0.a1 Prupe.3G037400_v2.0.a1
pyrus_communis	pycom09g09650 pycom17g14190
rosa_chinensis	RchiOBHm_Chr2g0146431
rosa_laevigata	RLG00000020200
rosa_multiflora	Rmu_sc0001986.1_g000003 Rmu_sc0030037.1_g000003
rosa_roxburghii	Rroxscaffold_2G00100100
rosa_rugosa	Rorug02G0394300
rosa_samantha	Rh2AG451100 Rh2BG463600 Rh2CG437900 Rh2DG472600
rosa_wichuraiana	Rw2G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2102
Acc36I	ACCTGC	2 cut(s)	2102, 2335
AccB1I	GGYRCC	1 cut(s)	23
AccB7I	CCANNNNNTGG	1 cut(s)	41
AccBSI	CCGCTC	1 cut(s)	757
AciI	CCGC	3 cut(s)	7, 755, 1923
AclWI	GGATC	2 cut(s)	672, 971
AcoI	YGGCCR	2 cut(s)	376, 752
AcsI	RAATTY	4 cut(s)	45, 452, 747, 1816
AcuI	CTGAAG	4 cut(s)	924, 946, 1848, 1989
AcvI	CACGTG	1 cut(s)	131
AfaI	GTAC	5 cut(s)	91, 1092, 1477, 1883, 2161
AfiI	CCNNNNNNNGG	4 cut(s)	41, 247, 737, 2427
AflII	CTTAAG	1 cut(s)	71
AflIII	ACRYGT	2 cut(s)	128, 1095
AhdI	GACNNNNNGTC	1 cut(s)	580
AjnI	CCWGG	5 cut(s)	108, 652, 703, 742, 1533
AjuI	GAANNNNNNNTTGG	6 cut(s)	357, 389, 1332, 1364, 2224, 2256
AloI	GAACNNNNNNTCC	2 cut(s)	1834, 1866
Alw21I	GWGCWC	5 cut(s)	1003, 1194, 1576, 1979, 1996
Alw26I	GTCTC	5 cut(s)	18, 35, 1659, 1802, 2353
Alw44I	GTGCAC	2 cut(s)	1190, 1975
AlwI	GGATC	2 cut(s)	672, 971
Ama87I	CYCGRG	3 cut(s)	843, 1335, 2130
AoxI	GGCC	6 cut(s)	376, 752, 965, 1788, 2126, 2296
ApaLI	GTGCAC	2 cut(s)	1190, 1975
ApoI	RAATTY	4 cut(s)	45, 452, 747, 1816
ArsI	GACNNNNNNTTYG	4 cut(s)	732, 764, 2415, 2447
Asp700I	GAANNNNTTC	2 cut(s)	825, 2328
AspLEI	GCGC	1 cut(s)	555
AspS9I	GGNCC	7 cut(s)	740, 913, 966, 1788, 2126, 2296, 2431
AsuC2I	CCSGG	1 cut(s)	1523
AsuHPI	GGTGA	9 cut(s)	98, 224, 334, 1091, 1958, 2044, 2126, 2198, 2441
AsuNHI	GCTAGC	1 cut(s)	2414
AvaI	CYCGRG	3 cut(s)	843, 1335, 2130
AvaII	GGWCC	3 cut(s)	740, 913, 2431
BaeGI	GKGCMC	2 cut(s)	1194, 1979
BalI	TGGCCA	1 cut(s)	378
BanI	GGYRCC	1 cut(s)	23
BanII	GRGCYC	1 cut(s)	2276
BarI	GAAGNNNNNNTAC	2 cut(s)	1135, 1167
BauI	CACGAG	1 cut(s)	1127
BbrPI	CACGTG	1 cut(s)	131
BbsI	GAAGAC	2 cut(s)	220, 2144
Bbv12I	GWGCWC	5 cut(s)	1003, 1194, 1576, 1979, 1996
BccI	CCATC	6 cut(s)	689, 1192, 1948, 2111, 2138, 2225
BceAI	ACGGC	2 cut(s)	302, 1775
BciT130I	CCWGG	5 cut(s)	110, 654, 705, 744, 1535
BciVI	GTATCC	1 cut(s)	1042
BclI	TGATCA	2 cut(s)	949, 2392
BcnI	CCSGG	1 cut(s)	1523
BcoDI	GTCTC	5 cut(s)	18, 35, 1659, 1802, 2353
BfaI	CTAG	3 cut(s)	1007, 2267, 2415
BfmI	CTRYAG	1 cut(s)	1394
BfrI	CTTAAG	1 cut(s)	71
BfuAI	ACCTGC	2 cut(s)	2102, 2335
BfuI	GTATCC	1 cut(s)	1042
BglII	AGATCT	3 cut(s)	793, 1239, 1331
BlpI	GCTNAGC	1 cut(s)	492
Bme1390I	CCNGG	6 cut(s)	110, 654, 705, 744, 1523, 1535
Bme18I	GGWCC	3 cut(s)	740, 913, 2431
BmeRI	GACNNNNNGTC	1 cut(s)	580
BmeT110I	CYCGRG	3 cut(s)	843, 1335, 2130
BmgT120I	GGNCC	7 cut(s)	740, 913, 966, 1788, 2126, 2296, 2431
BmiI	GGNNCC	8 cut(s)	25, 82, 651, 968, 1896, 2263, 2297, 2432
BmrFI	CCNGG	6 cut(s)	110, 654, 705, 744, 1523, 1535
BmrI	ACTGGG	1 cut(s)	586
BmtI	GCTAGC	1 cut(s)	2418
BmuI	ACTGGG	1 cut(s)	586
BpiI	GAAGAC	2 cut(s)	220, 2144
BpmI	CTGGAG	4 cut(s)	70, 785, 1944, 2229
Bpu1102I	GCTNAGC	1 cut(s)	492
BpuEI	CTTGAG	1 cut(s)	1854
BpuMI	CCSGG	1 cut(s)	1523
BsaAI	YACGTR	1 cut(s)	131
BsaI	GGTCTC	2 cut(s)	18, 2353
BsaJI	CCNNGG	8 cut(s)	257, 318, 970, 1278, 1533, 1635, 1853, 2129
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 247, 737, 2427
Bse118I	RCCGGY	2 cut(s)	240, 1389
Bse1I	ACTGG	3 cut(s)	87, 581, 1423
Bse3DI	GCAATG	2 cut(s)	1566, 1932
BseBI	CCWGG	5 cut(s)	110, 654, 705, 744, 1535
BseDI	CCNNGG	8 cut(s)	257, 318, 970, 1278, 1533, 1635, 1853, 2129
BseGI	GGATG	2 cut(s)	854, 1474
BseLI	CCNNNNNNNGG	4 cut(s)	41, 247, 737, 2427
BseMI	GCAATG	2 cut(s)	1566, 1932
BseMII	CTCAG	4 cut(s)	995, 1196, 1670, 1829
BseNI	ACTGG	3 cut(s)	87, 581, 1423
BseRI	GAGGAG	3 cut(s)	1145, 1746, 2531
BseSI	GKGCMC	2 cut(s)	1194, 1979
BseYI	CCCAGC	4 cut(s)	503, 591, 2275, 2426
BsgI	GTGCAG	1 cut(s)	553
BshFI	GGCC	6 cut(s)	378, 754, 967, 1790, 2128, 2298
BshNI	GGYRCC	1 cut(s)	23
BsiHKAI	GWGCWC	5 cut(s)	1003, 1194, 1576, 1979, 1996
BsiHKCI	CYCGRG	3 cut(s)	843, 1335, 2130
BsiSI	CCGG	3 cut(s)	241, 1390, 1522
BslFI	GGGAC	1 cut(s)	264
BslI	CCNNNNNNNGG	4 cut(s)	41, 247, 737, 2427
BsmAI	GTCTC	5 cut(s)	18, 35, 1659, 1802, 2353
BsmFI	GGGAC	1 cut(s)	264
BsmI	GAATGC	1 cut(s)	1747
BsnI	GGCC	6 cut(s)	378, 754, 967, 1790, 2128, 2298
Bso31I	GGTCTC	2 cut(s)	18, 2353
BsoBI	CYCGRG	3 cut(s)	843, 1335, 2130
Bsp1286I	GDGCHC	6 cut(s)	1003, 1194, 1576, 1979, 1996, 2276
Bsp1407I	TGTACA	1 cut(s)	1090
Bsp143I	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
Bsp1720I	GCTNAGC	1 cut(s)	492
Bsp19I	CCATGG	2 cut(s)	257, 970
BspACI	CCGC	3 cut(s)	7, 755, 1923
BspANI	GGCC	6 cut(s)	378, 754, 967, 1790, 2128, 2298
BspCNI	CTCAG	4 cut(s)	994, 1197, 1669, 1830
BspHI	TCATGA	1 cut(s)	829
BspLI	GGNNCC	8 cut(s)	25, 82, 651, 968, 1896, 2263, 2297, 2432
BspMAI	CTGCAG	1 cut(s)	1398
BspMI	ACCTGC	2 cut(s)	2102, 2335
BspOI	GCTAGC	1 cut(s)	2418
BspPI	GGATC	2 cut(s)	672, 971
BspT107I	GGYRCC	1 cut(s)	23
BspTI	CTTAAG	1 cut(s)	71
BspTNI	GGTCTC	2 cut(s)	18, 2353
BsrBI	CCGCTC	1 cut(s)	757
BsrDI	GCAATG	2 cut(s)	1566, 1932
BsrFI	RCCGGY	2 cut(s)	240, 1389
BsrGI	TGTACA	1 cut(s)	1090
BsrI	ACTGG	3 cut(s)	87, 581, 1423
BssAI	RCCGGY	2 cut(s)	240, 1389
BssECI	CCNNGG	8 cut(s)	257, 318, 970, 1278, 1533, 1635, 1853, 2129
BssMI	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
BssSI	CACGAG	1 cut(s)	1127
BssT1I	CCWWGG	4 cut(s)	257, 970, 1635, 1853
Bst2BI	CACGAG	1 cut(s)	1127
Bst2UI	CCWGG	5 cut(s)	110, 654, 705, 744, 1535
Bst4CI	ACNGT	6 cut(s)	100, 1172, 1453, 1972, 2078, 2164
Bst6I	CTCTTC	4 cut(s)	216, 332, 2008, 2508
BstAFI	CTTAAG	1 cut(s)	71
BstAPI	GCANNNNNTGC	2 cut(s)	527, 1393
BstAUI	TGTACA	1 cut(s)	1090
BstBAI	YACGTR	1 cut(s)	131
BstDEI	CTNAG	7 cut(s)	492, 981, 1019, 1205, 1586, 1656, 1838
BstDSI	CCRYGG	4 cut(s)	257, 318, 970, 1278
BstF5I	GGATG	2 cut(s)	854, 1474
BstHHI	GCGC	1 cut(s)	555
BstKTI	GATC	9 cut(s)	667, 796, 952, 979, 1084, 1242, 1334, 1876, 2395
BstMAI	GTCTC	5 cut(s)	18, 35, 1659, 1802, 2353
BstMBI	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
BstMWI	GCNNNNNNNGC	7 cut(s)	527, 593, 1173, 1390, 1393, 1796, 1936
BstNI	CCWGG	5 cut(s)	110, 654, 705, 744, 1535
BstNSI	RCATGY	7 cut(s)	140, 231, 559, 591, 1099, 1229, 2344
BstSCI	CCNGG	6 cut(s)	108, 652, 703, 742, 1521, 1533
BstSFI	CTRYAG	1 cut(s)	1394
BstSLI	GKGCMC	2 cut(s)	1194, 1979
BstV2I	GAAGAC	2 cut(s)	220, 2144
BstX2I	RGATCY	4 cut(s)	793, 976, 1239, 1331
BstXI	CCANNNNNNTGG	1 cut(s)	750
BstYI	RGATCY	4 cut(s)	793, 976, 1239, 1331
BsuI	GTATCC	1 cut(s)	1042
BsuRI	GGCC	6 cut(s)	378, 754, 967, 1790, 2128, 2298
BtgI	CCRYGG	4 cut(s)	257, 318, 970, 1278
BtsCI	GGATG	2 cut(s)	854, 1474
BtsI	GCAGTG	3 cut(s)	528, 1225, 2112
BtsIMutI	CAGTG	7 cut(s)	528, 570, 1225, 1430, 2013, 2112, 2139
BveI	ACCTGC	2 cut(s)	2102, 2335
CciI	TCATGA	1 cut(s)	829
CfoI	GCGC	1 cut(s)	555
Cfr10I	RCCGGY	2 cut(s)	240, 1389
Cfr13I	GGNCC	7 cut(s)	740, 913, 966, 1788, 2126, 2296, 2431
Csp6I	GTAC	5 cut(s)	90, 1091, 1476, 1882, 2160
CviQI	GTAC	5 cut(s)	90, 1091, 1476, 1882, 2160
DdeI	CTNAG	7 cut(s)	492, 981, 1019, 1205, 1586, 1656, 1838
DpnI	GATC	9 cut(s)	666, 795, 951, 978, 1083, 1241, 1333, 1875, 2394
DpnII	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
DraI	TTTAAA	2 cut(s)	673, 1608
DriI	GACNNNNNGTC	1 cut(s)	580
EaeI	YGGCCR	2 cut(s)	376, 752
Eam1104I	CTCTTC	4 cut(s)	216, 332, 2008, 2508
Eam1105I	GACNNNNNGTC	1 cut(s)	580
EarI	CTCTTC	4 cut(s)	216, 332, 2008, 2508
Eco130I	CCWWGG	4 cut(s)	257, 970, 1635, 1853
Eco24I	GRGCYC	1 cut(s)	2276
Eco31I	GGTCTC	2 cut(s)	18, 2353
Eco32I	GATATC	1 cut(s)	898
Eco47I	GGWCC	3 cut(s)	740, 913, 2431
Eco57I	CTGAAG	4 cut(s)	924, 946, 1848, 1989
Eco72I	CACGTG	1 cut(s)	131
Eco88I	CYCGRG	3 cut(s)	843, 1335, 2130
EcoO109I	RGGNCCY	3 cut(s)	966, 2296, 2431
EcoRI	GAATTC	1 cut(s)	1816
EcoRII	CCWGG	5 cut(s)	108, 652, 703, 742, 1533
EcoRV	GATATC	1 cut(s)	898
EcoT14I	CCWWGG	4 cut(s)	257, 970, 1635, 1853
EcoT22I	ATGCAT	1 cut(s)	2342
EcoT38I	GRGCYC	1 cut(s)	2276
ErhI	CCWWGG	4 cut(s)	257, 970, 1635, 1853
FalI	AAGNNNNNCTT	3 cut(s)	2316, 2348, 2505
FaqI	GGGAC	1 cut(s)	264
FbaI	TGATCA	2 cut(s)	949, 2392
FokI	GGATG	2 cut(s)	861, 1481
FriOI	GRGCYC	1 cut(s)	2276
FspBI	CTAG	3 cut(s)	1007, 2267, 2415
GlaI	GCGC	1 cut(s)	554
GsaI	CCCAGC	4 cut(s)	507, 595, 2279, 2430
GsuI	CTGGAG	4 cut(s)	70, 785, 1944, 2229
HaeIII	GGCC	6 cut(s)	378, 754, 967, 1790, 2128, 2298
HapII	CCGG	3 cut(s)	241, 1390, 1522
HhaI	GCGC	1 cut(s)	555
Hin6I	GCGC	1 cut(s)	553
HinP1I	GCGC	1 cut(s)	553
HinfI	GANTC	7 cut(s)	173, 196, 581, 988, 1622, 1810, 1886
HpaII	CCGG	3 cut(s)	241, 1390, 1522
HphI	GGTGA	9 cut(s)	98, 224, 334, 1091, 1958, 2044, 2126, 2198, 2441
Hpy166II	GTNNAC	5 cut(s)	134, 1093, 1192, 1282, 1977
Hpy8I	GTNNAC	5 cut(s)	134, 1093, 1192, 1282, 1977
HpyAV	CCTTC	5 cut(s)	741, 948, 1412, 2252, 2444
HpyCH4III	ACNGT	6 cut(s)	100, 1172, 1453, 1972, 2078, 2164
HpyCH4IV	ACGT	2 cut(s)	130, 865
HpyF10VI	GCNNNNNNNGC	7 cut(s)	527, 593, 1173, 1390, 1393, 1796, 1936
HpyF3I	CTNAG	7 cut(s)	492, 981, 1019, 1205, 1586, 1656, 1838
HpySE526I	ACGT	2 cut(s)	130, 865
HspAI	GCGC	1 cut(s)	553
Ksp22I	TGATCA	2 cut(s)	949, 2392
Kzo9I	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
LmnI	GCTCC	7 cut(s)	80, 127, 762, 856, 2423, 2506, 2518
MaeI	CTAG	3 cut(s)	1007, 2267, 2415
MaeII	ACGT	2 cut(s)	130, 865
MaeIII	GTNAC	7 cut(s)	230, 838, 1453, 1833, 2050, 2212, 2447
MalI	GATC	9 cut(s)	666, 795, 951, 978, 1083, 1241, 1333, 1875, 2394
MbiI	CCGCTC	1 cut(s)	757
MboI	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
MfeI	CAATTG	2 cut(s)	905, 2456
MflI	RGATCY	4 cut(s)	793, 976, 1239, 1331
MhlI	GDGCHC	6 cut(s)	1003, 1194, 1576, 1979, 1996, 2276
MlsI	TGGCCA	1 cut(s)	378
MluNI	TGGCCA	1 cut(s)	378
MlyI	GAGTC	3 cut(s)	190, 590, 1804
MmeI	TCCRAC	2 cut(s)	149, 162
Mox20I	TGGCCA	1 cut(s)	378
Mph1103I	ATGCAT	1 cut(s)	2342
MroXI	GAANNNNTTC	2 cut(s)	825, 2328
MscI	TGGCCA	1 cut(s)	378
MseI	TTAA	6 cut(s)	72, 203, 483, 548, 672, 1607
MslI	CAYNNNNRTG	5 cut(s)	21, 834, 1098, 1925, 2142
Msp20I	TGGCCA	1 cut(s)	378
MspA1I	CMGCKG	1 cut(s)	1719
MspCI	CTTAAG	1 cut(s)	71
MspI	CCGG	3 cut(s)	241, 1390, 1522
MspR9I	CCNGG	6 cut(s)	110, 654, 705, 744, 1523, 1535
MunI	CAATTG	2 cut(s)	905, 2456
Mva1269I	GAATGC	1 cut(s)	1747
MvaI	CCWGG	5 cut(s)	110, 654, 705, 744, 1535
MwoI	GCNNNNNNNGC	7 cut(s)	527, 593, 1173, 1390, 1393, 1796, 1936
NciI	CCSGG	1 cut(s)	1523
NcoI	CCATGG	2 cut(s)	257, 970
NdeII	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
NheI	GCTAGC	1 cut(s)	2414
NlaIV	GGNNCC	8 cut(s)	25, 82, 651, 968, 1896, 2263, 2297, 2432
NmuCI	GTSAC	3 cut(s)	230, 2050, 2447
NsiI	ATGCAT	1 cut(s)	2342
NspI	RCATGY	7 cut(s)	140, 231, 559, 591, 1099, 1229, 2344
PaeI	GCATGC	3 cut(s)	559, 591, 2344
PaeR7I	CTCGAG	1 cut(s)	843
PagI	TCATGA	1 cut(s)	829
PaqCI	CACCTGC	1 cut(s)	2102
PciI	ACATGT	1 cut(s)	1095
PctI	GAATGC	1 cut(s)	1747
PdmI	GAANNNNTTC	2 cut(s)	825, 2328
PfeI	GAWTC	4 cut(s)	173, 988, 1622, 1886
PflMI	CCANNNNNTGG	1 cut(s)	41
PfoI	TCCNGGA	2 cut(s)	703, 1521
PleI	GAGTC	3 cut(s)	190, 589, 1804
PmaCI	CACGTG	1 cut(s)	131
PmlI	CACGTG	1 cut(s)	131
PpsI	GAGTC	3 cut(s)	190, 589, 1804
Ppu21I	YACGTR	1 cut(s)	131
PpuMI	RGGWCCY	1 cut(s)	2431
PscI	ACATGT	1 cut(s)	1095
Psp5II	RGGWCCY	1 cut(s)	2431
Psp6I	CCWGG	5 cut(s)	108, 652, 703, 742, 1533
PspCI	CACGTG	1 cut(s)	131
PspFI	CCCAGC	4 cut(s)	503, 591, 2275, 2426
PspGI	CCWGG	5 cut(s)	108, 652, 703, 742, 1533
PspN4I	GGNNCC	8 cut(s)	25, 82, 651, 968, 1896, 2263, 2297, 2432
PspPI	GGNCC	7 cut(s)	740, 913, 966, 1788, 2126, 2296, 2431
PspPPI	RGGWCCY	1 cut(s)	2431
PspXI	VCTCGAGB	1 cut(s)	843
PstI	CTGCAG	1 cut(s)	1398
PsuI	RGATCY	4 cut(s)	793, 976, 1239, 1331
PvuII	CAGCTG	1 cut(s)	1719
RsaI	GTAC	5 cut(s)	91, 1092, 1477, 1883, 2161
RsaNI	GTAC	5 cut(s)	90, 1091, 1476, 1882, 2160
RseI	CAYNNNNRTG	5 cut(s)	21, 834, 1098, 1925, 2142
SaqAI	TTAA	6 cut(s)	72, 203, 483, 548, 672, 1607
Sau3AI	GATC	9 cut(s)	664, 793, 949, 976, 1081, 1239, 1331, 1873, 2392
Sau96I	GGNCC	7 cut(s)	740, 913, 966, 1788, 2126, 2296, 2431
SchI	GAGTC	3 cut(s)	190, 590, 1804
ScrFI	CCNGG	6 cut(s)	110, 654, 705, 744, 1523, 1535
SduI	GDGCHC	6 cut(s)	1003, 1194, 1576, 1979, 1996, 2276
SfcI	CTRYAG	1 cut(s)	1394
Sfr274I	CTCGAG	1 cut(s)	843
SinI	GGWCC	3 cut(s)	740, 913, 2431
SlaI	CTCGAG	1 cut(s)	843
SmiMI	CAYNNNNRTG	5 cut(s)	21, 834, 1098, 1925, 2142
SmlI	CTYRAG	3 cut(s)	71, 843, 1869
SmoI	CTYRAG	3 cut(s)	71, 843, 1869
SphI	GCATGC	3 cut(s)	559, 591, 2344
SsiI	CCGC	3 cut(s)	7, 755, 1923
SspMI	CTAG	3 cut(s)	1007, 2267, 2415
StyD4I	CCNGG	6 cut(s)	108, 652, 703, 742, 1521, 1533
StyI	CCWWGG	4 cut(s)	257, 970, 1635, 1853
TaaI	ACNGT	6 cut(s)	100, 1172, 1453, 1972, 2078, 2164
TaiI	ACGT	2 cut(s)	133, 868
TaqI	TCGA	5 cut(s)	844, 991, 2220, 2249, 2335
TatI	WGTACW	3 cut(s)	89, 1090, 1475
TauI	GCSGC	1 cut(s)	757
TfiI	GAWTC	4 cut(s)	173, 988, 1622, 1886
Tru1I	TTAA	6 cut(s)	72, 203, 483, 548, 672, 1607
Tru9I	TTAA	6 cut(s)	72, 203, 483, 548, 672, 1607
TscAI	CASTG	7 cut(s)	528, 577, 1225, 1430, 2013, 2112, 2146
TseFI	GTSAC	3 cut(s)	230, 2050, 2447
Tsp45I	GTSAC	3 cut(s)	230, 2050, 2447
TspGWI	ACGGA	1 cut(s)	294
TspRI	CASTG	7 cut(s)	528, 577, 1225, 1430, 2013, 2112, 2146
Van91I	CCANNNNNTGG	1 cut(s)	41
Vha464I	CTTAAG	1 cut(s)	71
VneI	GTGCAC	2 cut(s)	1190, 1975
VpaK11BI	GGWCC	3 cut(s)	740, 913, 2431
XapI	RAATTY	4 cut(s)	45, 452, 747, 1816
XceI	RCATGY	7 cut(s)	140, 231, 559, 591, 1099, 1229, 2344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2500
XhoI	CTCGAG	1 cut(s)	843
XmnI	GAANNNNTTC	2 cut(s)	825, 2328
XspI	CTAG	3 cut(s)	1007, 2267, 2415
Zsp2I	ATGCAT	1 cut(s)	2342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.