Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14120 AT3G14120 AT3G14120 |
| fragaria_vesca | FvH4_6g35170 FvH4_6g35170 |
| malus_domestica | MD09G1178100.v1.1 MD17G1148600.v1.1 |
| prunus_persica | Prupe.3G037400_v2.0.a1 Prupe.3G037400_v2.0.a1 |
| pyrus_communis | pycom09g09650 pycom17g14190 |
| rosa_chinensis | RchiOBHm_Chr2g0146431 |
| rosa_laevigata | RLG00000020200 |
| rosa_multiflora | Rmu_sc0001986.1_g000003 Rmu_sc0030037.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00100100 |
| rosa_rugosa | Rorug02G0394300 |
| rosa_samantha | Rh2AG451100 Rh2BG463600 Rh2CG437900 Rh2DG472600 |
| rosa_wichuraiana | Rw2G036820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1031 |
| Acc36I | ACCTGC | 2 cut(s) | 1031, 1264 |
| AciI | CCGC | 1 cut(s) | 852 |
| AclI | AACGTT | 1 cut(s) | 579 |
| AcoI | YGGCCR | 1 cut(s) | 1032 |
| AcsI | RAATTY | 1 cut(s) | 745 |
| AcuI | CTGAAG | 2 cut(s) | 777, 918 |
| AfaI | GTAC | 3 cut(s) | 406, 1090, 1214 |
| AflIII | ACRYGT | 1 cut(s) | 24 |
| AgsI | TTSAA | 9 cut(s) | 233, 471, 662, 692, 839, 1111, 1133, 1334, 1442 |
| AjnI | CCWGG | 2 cut(s) | 462, 1169 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 261, 293 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 763, 795 |
| Alw21I | GWGCWC | 4 cut(s) | 123, 505, 908, 925 |
| Alw26I | GTCTC | 2 cut(s) | 731, 1282 |
| Alw44I | GTGCAC | 2 cut(s) | 119, 904 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 592 |
| AoxI | GGCC | 1 cut(s) | 1032 |
| ApaLI | GTGCAC | 2 cut(s) | 119, 904 |
| ApeKI | GCWGC | 5 cut(s) | 313, 322, 728, 1026, 1100 |
| ApoI | RAATTY | 1 cut(s) | 745 |
| AseI | ATTAAT | 1 cut(s) | 914 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 599, 1257 |
| AsuHPI | GGTGA | 5 cut(s) | 887, 973, 1055, 1127, 1370 |
| AsuNHI | GCTAGC | 1 cut(s) | 1343 |
| BaeGI | GKGCMC | 2 cut(s) | 123, 908 |
| BanII | GRGCYC | 1 cut(s) | 1205 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 64, 96 |
| Bbv12I | GWGCWC | 4 cut(s) | 123, 505, 908, 925 |
| BbvI | GCAGC | 5 cut(s) | 309, 325, 740, 1013, 1087 |
| BccI | CCATC | 5 cut(s) | 121, 877, 1040, 1067, 1154 |
| BceAI | ACGGC | 2 cut(s) | 704, 1019 |
| BciT130I | CCWGG | 2 cut(s) | 464, 1171 |
| BcoDI | GTCTC | 2 cut(s) | 731, 1282 |
| BfaI | CTAG | 1 cut(s) | 1344 |
| BfmI | CTRYAG | 2 cut(s) | 323, 1388 |
| BfuAI | ACCTGC | 2 cut(s) | 1031, 1264 |
| BglII | AGATCT | 2 cut(s) | 168, 260 |
| BisI | GCNGC | 5 cut(s) | 314, 323, 729, 1027, 1101 |
| BlsI | GCNGC | 5 cut(s) | 315, 324, 730, 1028, 1102 |
| Bme1390I | CCNGG | 2 cut(s) | 464, 1171 |
| BmiI | GGNNCC | 2 cut(s) | 825, 1192 |
| BmrFI | CCNGG | 2 cut(s) | 464, 1171 |
| BmsI | GCATC | 4 cut(s) | 622, 883, 1156, 1256 |
| BmtI | GCTAGC | 1 cut(s) | 1347 |
| BpmI | CTGGAG | 3 cut(s) | 189, 873, 1158 |
| BpuEI | CTTGAG | 1 cut(s) | 783 |
| Bsa29I | ATCGAT | 1 cut(s) | 1324 |
| BsaI | GGTCTC | 1 cut(s) | 1282 |
| BsaJI | CCNNGG | 7 cut(s) | 462, 463, 564, 732, 782, 1035, 1194 |
| Bse118I | RCCGGY | 1 cut(s) | 318 |
| Bse1I | ACTGG | 3 cut(s) | 206, 352, 653 |
| Bse3DI | GCAATG | 2 cut(s) | 495, 861 |
| BseBI | CCWGG | 2 cut(s) | 464, 1171 |
| BseCI | ATCGAT | 1 cut(s) | 1324 |
| BseDI | CCNNGG | 7 cut(s) | 462, 463, 564, 732, 782, 1035, 1194 |
| BseGI | GGATG | 1 cut(s) | 403 |
| BseMI | GCAATG | 2 cut(s) | 495, 861 |
| BseMII | CTCAG | 3 cut(s) | 125, 599, 758 |
| BseNI | ACTGG | 3 cut(s) | 206, 352, 653 |
| BseRI | GAGGAG | 2 cut(s) | 74, 1460 |
| BseSI | GKGCMC | 2 cut(s) | 123, 908 |
| BseXI | GCAGC | 5 cut(s) | 309, 325, 740, 1013, 1087 |
| BseYI | CCCAGC | 2 cut(s) | 1204, 1222 |
| BshFI | GGCC | 1 cut(s) | 1034 |
| BshVI | ATCGAT | 1 cut(s) | 1324 |
| BsiHKAI | GWGCWC | 4 cut(s) | 123, 505, 908, 925 |
| BsiSI | CCGG | 1 cut(s) | 319 |
| BslFI | GGGAC | 1 cut(s) | 667 |
| BsmAI | GTCTC | 2 cut(s) | 731, 1282 |
| BsmFI | GGGAC | 1 cut(s) | 667 |
| BsmI | GAATGC | 1 cut(s) | 676 |
| BsnI | GGCC | 1 cut(s) | 1034 |
| Bso31I | GGTCTC | 1 cut(s) | 1282 |
| Bsp1286I | GDGCHC | 5 cut(s) | 123, 505, 908, 925, 1205 |
| Bsp143I | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| BspACI | CCGC | 1 cut(s) | 852 |
| BspANI | GGCC | 1 cut(s) | 1034 |
| BspCNI | CTCAG | 3 cut(s) | 126, 598, 759 |
| BspDI | ATCGAT | 1 cut(s) | 1324 |
| BspLI | GGNNCC | 2 cut(s) | 825, 1192 |
| BspMAI | CTGCAG | 2 cut(s) | 327, 1392 |
| BspMI | ACCTGC | 2 cut(s) | 1031, 1264 |
| BspOI | GCTAGC | 1 cut(s) | 1347 |
| BspTNI | GGTCTC | 1 cut(s) | 1282 |
| BsrDI | GCAATG | 2 cut(s) | 495, 861 |
| BsrFI | RCCGGY | 1 cut(s) | 318 |
| BsrI | ACTGG | 3 cut(s) | 206, 352, 653 |
| BssAI | RCCGGY | 1 cut(s) | 318 |
| BssECI | CCNNGG | 7 cut(s) | 462, 463, 564, 732, 782, 1035, 1194 |
| BssMI | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| BssT1I | CCWWGG | 3 cut(s) | 732, 782, 1194 |
| Bst2UI | CCWGG | 2 cut(s) | 464, 1171 |
| Bst4CI | ACNGT | 6 cut(s) | 101, 382, 565, 901, 1007, 1093 |
| Bst6I | CTCTTC | 3 cut(s) | 228, 937, 1437 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 322 |
| BstC8I | GCNNGC | 6 cut(s) | 94, 846, 866, 1105, 1271, 1345 |
| BstDEI | CTNAG | 4 cut(s) | 134, 515, 585, 767 |
| BstDSI | CCRYGG | 2 cut(s) | 564, 1035 |
| BstF5I | GGATG | 1 cut(s) | 403 |
| BstKTI | GATC | 6 cut(s) | 13, 171, 263, 425, 805, 1324 |
| BstMAI | GTCTC | 2 cut(s) | 731, 1282 |
| BstMBI | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 102, 319, 322, 725, 865, 1279 |
| BstNI | CCWGG | 2 cut(s) | 464, 1171 |
| BstNSI | RCATGY | 3 cut(s) | 28, 158, 1273 |
| BstSCI | CCNGG | 2 cut(s) | 462, 1169 |
| BstSFI | CTRYAG | 2 cut(s) | 323, 1388 |
| BstSLI | GKGCMC | 2 cut(s) | 123, 908 |
| BstV1I | GCAGC | 5 cut(s) | 309, 325, 740, 1013, 1087 |
| BstX2I | RGATCY | 2 cut(s) | 168, 260 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 343 |
| BstYI | RGATCY | 2 cut(s) | 168, 260 |
| Bsu15I | ATCGAT | 1 cut(s) | 1324 |
| BsuRI | GGCC | 1 cut(s) | 1034 |
| BsuTUI | ATCGAT | 1 cut(s) | 1324 |
| BtgI | CCRYGG | 2 cut(s) | 564, 1035 |
| BtsCI | GGATG | 1 cut(s) | 403 |
| BtsI | GCAGTG | 1 cut(s) | 154 |
| BtsIMutI | CAGTG | 5 cut(s) | 154, 213, 359, 942, 1068 |
| BveI | ACCTGC | 2 cut(s) | 1031, 1264 |
| Cac8I | GCNNGC | 6 cut(s) | 94, 846, 866, 1105, 1271, 1345 |
| CaiI | CAGNNNCTG | 1 cut(s) | 592 |
| Cfr10I | RCCGGY | 1 cut(s) | 318 |
| ClaI | ATCGAT | 1 cut(s) | 1324 |
| Csp6I | GTAC | 3 cut(s) | 405, 1089, 1213 |
| CviAII | CATG | 7 cut(s) | 25, 34, 56, 124, 155, 1270, 1319 |
| CviQI | GTAC | 3 cut(s) | 405, 1089, 1213 |
| DdeI | CTNAG | 4 cut(s) | 134, 515, 585, 767 |
| DpnI | GATC | 6 cut(s) | 12, 170, 262, 424, 804, 1323 |
| DpnII | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| DraI | TTTAAA | 1 cut(s) | 537 |
| EaeI | YGGCCR | 1 cut(s) | 1032 |
| Eam1104I | CTCTTC | 3 cut(s) | 228, 937, 1437 |
| EarI | CTCTTC | 3 cut(s) | 228, 937, 1437 |
| Eco130I | CCWWGG | 3 cut(s) | 732, 782, 1194 |
| Eco24I | GRGCYC | 1 cut(s) | 1205 |
| Eco31I | GGTCTC | 1 cut(s) | 1282 |
| Eco57I | CTGAAG | 2 cut(s) | 777, 918 |
| EcoRI | GAATTC | 1 cut(s) | 745 |
| EcoRII | CCWGG | 2 cut(s) | 462, 1169 |
| EcoT14I | CCWWGG | 3 cut(s) | 732, 782, 1194 |
| EcoT22I | ATGCAT | 1 cut(s) | 1271 |
| EcoT38I | GRGCYC | 1 cut(s) | 1205 |
| ErhI | CCWWGG | 3 cut(s) | 732, 782, 1194 |
| FaeI | CATG | 7 cut(s) | 28, 37, 59, 127, 158, 1273, 1322 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 1245, 1277, 1434 |
| FaqI | GGGAC | 1 cut(s) | 667 |
| FatI | CATG | 7 cut(s) | 24, 33, 55, 123, 154, 1269, 1318 |
| Fnu4HI | GCNGC | 5 cut(s) | 314, 323, 729, 1027, 1101 |
| FokI | GGATG | 1 cut(s) | 410 |
| FriOI | GRGCYC | 1 cut(s) | 1205 |
| Fsp4HI | GCNGC | 5 cut(s) | 314, 323, 729, 1027, 1101 |
| FspBI | CTAG | 1 cut(s) | 1344 |
| GluI | GCNGC | 5 cut(s) | 314, 323, 729, 1027, 1101 |
| GsaI | CCCAGC | 2 cut(s) | 1208, 1226 |
| GsuI | CTGGAG | 3 cut(s) | 189, 873, 1158 |
| HaeIII | GGCC | 1 cut(s) | 1034 |
| HapII | CCGG | 1 cut(s) | 319 |
| Hin1II | CATG | 7 cut(s) | 28, 37, 59, 127, 158, 1273, 1322 |
| HinfI | GANTC | 4 cut(s) | 215, 551, 739, 815 |
| HpaII | CCGG | 1 cut(s) | 319 |
| HphI | GGTGA | 5 cut(s) | 887, 973, 1055, 1127, 1370 |
| Hpy166II | GTNNAC | 4 cut(s) | 121, 211, 574, 906 |
| Hpy188I | TCNGA | 6 cut(s) | 301, 550, 559, 588, 744, 1351 |
| Hpy188III | TCNNGA | 9 cut(s) | 258, 266, 452, 800, 890, 1150, 1158, 1250, 1458 |
| Hpy8I | GTNNAC | 4 cut(s) | 121, 211, 574, 906 |
| HpyAV | CCTTC | 2 cut(s) | 341, 1181 |
| HpyCH4III | ACNGT | 6 cut(s) | 101, 382, 565, 901, 1007, 1093 |
| HpyCH4IV | ACGT | 2 cut(s) | 579, 1211 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 102, 319, 322, 725, 865, 1279 |
| HpyF3I | CTNAG | 4 cut(s) | 134, 515, 585, 767 |
| HpySE526I | ACGT | 2 cut(s) | 579, 1211 |
| Hsp92II | CATG | 7 cut(s) | 28, 37, 59, 127, 158, 1273, 1322 |
| Kzo9I | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| LmnI | GCTCC | 5 cut(s) | 612, 1139, 1352, 1435, 1447 |
| Lsp1109I | GCAGC | 5 cut(s) | 309, 325, 740, 1013, 1087 |
| LweI | GCATC | 4 cut(s) | 622, 883, 1156, 1256 |
| MaeI | CTAG | 1 cut(s) | 1344 |
| MaeII | ACGT | 2 cut(s) | 579, 1211 |
| MaeIII | GTNAC | 5 cut(s) | 382, 762, 979, 1056, 1376 |
| MalI | GATC | 6 cut(s) | 12, 170, 262, 424, 804, 1323 |
| MboI | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| MflI | RGATCY | 2 cut(s) | 168, 260 |
| MhlI | GDGCHC | 5 cut(s) | 123, 505, 908, 925, 1205 |
| MluCI | AATT | 8 cut(s) | 197, 471, 657, 662, 745, 839, 1000, 1334 |
| MlyI | GAGTC | 2 cut(s) | 209, 733 |
| MmeI | TCCRAC | 1 cut(s) | 259 |
| Mph1103I | ATGCAT | 1 cut(s) | 1271 |
| MroXI | GAANNNNTTC | 2 cut(s) | 599, 1257 |
| MseI | TTAA | 2 cut(s) | 536, 914 |
| MslI | CAYNNNNRTG | 3 cut(s) | 27, 810, 854 |
| MspI | CCGG | 1 cut(s) | 319 |
| MspR9I | CCNGG | 2 cut(s) | 464, 1171 |
| Mva1269I | GAATGC | 1 cut(s) | 676 |
| MvaI | CCWGG | 2 cut(s) | 464, 1171 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 102, 319, 322, 725, 865, 1279 |
| NdeII | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| NheI | GCTAGC | 1 cut(s) | 1343 |
| NlaIII | CATG | 7 cut(s) | 28, 37, 59, 127, 158, 1273, 1322 |
| NlaIV | GGNNCC | 2 cut(s) | 825, 1192 |
| NmuCI | GTSAC | 3 cut(s) | 979, 1056, 1376 |
| NsiI | ATGCAT | 1 cut(s) | 1271 |
| NspI | RCATGY | 3 cut(s) | 28, 158, 1273 |
| PaeI | GCATGC | 1 cut(s) | 1273 |
| PaqCI | CACCTGC | 1 cut(s) | 1031 |
| PasI | CCCWGGG | 1 cut(s) | 463 |
| PciI | ACATGT | 1 cut(s) | 24 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 612 |
| PctI | GAATGC | 1 cut(s) | 676 |
| PdmI | GAANNNNTTC | 2 cut(s) | 599, 1257 |
| PfeI | GAWTC | 2 cut(s) | 551, 815 |
| PkrI | GCNGC | 5 cut(s) | 315, 324, 730, 1028, 1102 |
| PleI | GAGTC | 2 cut(s) | 209, 733 |
| PpsI | GAGTC | 2 cut(s) | 209, 733 |
| PscI | ACATGT | 1 cut(s) | 24 |
| PshBI | ATTAAT | 1 cut(s) | 914 |
| Psp1406I | AACGTT | 1 cut(s) | 579 |
| Psp6I | CCWGG | 2 cut(s) | 462, 1169 |
| PspFI | CCCAGC | 2 cut(s) | 1204, 1222 |
| PspGI | CCWGG | 2 cut(s) | 462, 1169 |
| PspN4I | GGNNCC | 2 cut(s) | 825, 1192 |
| PstI | CTGCAG | 2 cut(s) | 327, 1392 |
| PstNI | CAGNNNCTG | 1 cut(s) | 592 |
| PsuI | RGATCY | 2 cut(s) | 168, 260 |
| RsaI | GTAC | 3 cut(s) | 406, 1090, 1214 |
| RsaNI | GTAC | 3 cut(s) | 405, 1089, 1213 |
| RseI | CAYNNNNRTG | 3 cut(s) | 27, 810, 854 |
| SaqAI | TTAA | 2 cut(s) | 536, 914 |
| SatI | GCNGC | 5 cut(s) | 314, 323, 729, 1027, 1101 |
| Sau3AI | GATC | 6 cut(s) | 10, 168, 260, 422, 802, 1321 |
| SchI | GAGTC | 2 cut(s) | 209, 733 |
| ScrFI | CCNGG | 2 cut(s) | 464, 1171 |
| SduI | GDGCHC | 5 cut(s) | 123, 505, 908, 925, 1205 |
| SfaNI | GCATC | 4 cut(s) | 622, 883, 1156, 1256 |
| SfcI | CTRYAG | 2 cut(s) | 323, 1388 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 27, 810, 854 |
| SmlI | CTYRAG | 1 cut(s) | 798 |
| SmoI | CTYRAG | 1 cut(s) | 798 |
| SphI | GCATGC | 1 cut(s) | 1273 |
| Sse9I | AATT | 8 cut(s) | 197, 471, 657, 662, 745, 839, 1000, 1334 |
| SsiI | CCGC | 1 cut(s) | 852 |
| SspI | AATATT | 1 cut(s) | 1418 |
| SspMI | CTAG | 1 cut(s) | 1344 |
| StyD4I | CCNGG | 2 cut(s) | 462, 1169 |
| StyI | CCWWGG | 3 cut(s) | 732, 782, 1194 |
| TaaI | ACNGT | 6 cut(s) | 101, 382, 565, 901, 1007, 1093 |
| TaiI | ACGT | 2 cut(s) | 582, 1214 |
| TaqI | TCGA | 6 cut(s) | 9, 1011, 1149, 1178, 1264, 1324 |
| TasI | AATT | 8 cut(s) | 197, 471, 657, 662, 745, 839, 1000, 1334 |
| TatI | WGTACW | 1 cut(s) | 404 |
| TfiI | GAWTC | 2 cut(s) | 551, 815 |
| Tru1I | TTAA | 2 cut(s) | 536, 914 |
| Tru9I | TTAA | 2 cut(s) | 536, 914 |
| TscAI | CASTG | 5 cut(s) | 154, 213, 359, 942, 1075 |
| TseFI | GTSAC | 3 cut(s) | 979, 1056, 1376 |
| TseI | GCWGC | 5 cut(s) | 313, 322, 728, 1026, 1100 |
| Tsp45I | GTSAC | 3 cut(s) | 979, 1056, 1376 |
| TspDTI | ATGAA | 4 cut(s) | 287, 738, 828, 1355 |
| TspRI | CASTG | 5 cut(s) | 154, 213, 359, 942, 1075 |
| VneI | GTGCAC | 2 cut(s) | 119, 904 |
| VspI | ATTAAT | 1 cut(s) | 914 |
| XapI | RAATTY | 1 cut(s) | 745 |
| XceI | RCATGY | 3 cut(s) | 28, 158, 1273 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1429 |
| XmnI | GAANNNNTTC | 2 cut(s) | 599, 1257 |
| XspI | CTAG | 1 cut(s) | 1344 |
| Zsp2I | ATGCAT | 1 cut(s) | 1271 |