Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002903

Physical Location & Seq

Genomic Coordinates Forward (+)

4096447 .. 4101575

Gene Structure 5129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G057800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGGGAAGAAGGCAGTGGTGATTATTACCGCGGCGGCCGTGTGCACCGCAGCCGCCGCTCTGGTGGTGCGCCACCGCATCCGGAGCTCAGGCCGGTGGGCCCGGGCAACCGCCATCATCAAAGAGCTAGAGGAGAAGTGCGGGACCCCCATTGGGAAGCTGAGGCAGGTGGCTGACGCCATGGCTGTGGAGATGCACGCCGGCCTTGCCTCTGAAGGTGGCAGCAAGCTCAAGATGATCATTAGCTATGTCGACAATCTCCCTACTGGGACTGAAAAAGGGTTGTTTTATGCATTGGATCTTGGAGGAACAAACTTCCGTGTGCTGAGGGTGCAATTGGGGGGGAAGGGTCGTGGAATTATTAGTCAAGAATTTACAGAGGTCTCAATTCCTGAAAATCTTATGGTTGGGACTTCAGATGCACTGTTTGACTACATTGCAGCAGAACTTGCAAAATTTGTTGCTAAAGAAGGTCAAGATTATCAACTCCCTCCTGGCAGGCAGAGAGAACTAGGTTTTACCTTCTCATTCCCTGTGCTGCAATCATCAATTAATTCTGGGACCCTTATTAAGTGGACGAAGGGCTTCTCTATAGATGATGCAGTTGGCCAAGATGTTGTGGCTGAATTGAGTAAAGCCATTGAAAAACAAGGCCTTGATATGCGTGTGTCTGCTCTGGTTAATGACACGGTTGGGACATTAGCTGGAGGTAGGTATGTCAATGGGGATGTTGTTGCTGCTGTGATTTTAGGTACGGGTACAAATGCAGCATATGTAGAACGTGCACATGCAATACCAAAATGGCATGGTCTTCTACCTAAATCTGGAGATATGGTTATCAACATGGAGTGGGGCAATTTTAAGTCAGCACACCTTCCATTAACAGAATATGATCACTCATTGGATACCGAAAGCTTAAACCCTGGTGATCAGATTTTTGAGAAGCTAATATCTGGAATGTACTTGGGAGAAATTGTTCGCAGAGTTCTTTGTAAGATTGCTGAAGAAGCTTCCCTTTTTGGTGACACTGTTCCACCAAAGTTAAAAGTCCCATTCATTTTGAGGACACCTGACATGTCCGCAATGCATCATGACACATCCTCTGATCTTAAGGTGGTACGAGACATATTGAAGAATGTATTGGAGATATCAAATACTTCTCTTAAAGTAAGAAAAATTGTTGTGGAGCTCTGCAACATTGTTGCCACACGTGGGGCTCGCCTTGCTGCTGCTGGAATTGTAGGTGTTCTGAAAAAGGTGGGAAAAGACGCATTCAAGGATGGGGAAAAACAGAGGACAGTGGTAGCTTTGGATGGTGGATTGTACGAGCATTACAATGAATATAGTAAGTGCATGGAGAATACCCTAAGAGAATTGCTTGGAGAGGAAGTTTCTGAGAGTATCGTTATTGAACACTCTAATGATGGTTCTGGCATTGGAGCTGCCCTTCTTGCTGCCTCTCACTCACAATACCTTGGAGTCGATGAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230

Pfam Domains

Protein Families

Hexokinase_1 Hexokinase_2

Protein Analysis

498

Amino Acids

53.56

Weight (kDa)

6.17

Isoelectric Point (pI)

29.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37840
fragaria_vesca	FvH4_1g18730 FvH4_6g32470 FvH4_6g32470 FvH4_6g32470 FvH4_6g32470
malus_domestica	MD02G1194700.v1.1 MD09G1202200.v1.1 MD15G1305100.v1.1 MD17G1183100.v1.1
prunus_persica	Prupe.3G057800_v2.0.a1 Prupe.6G212100_v2.0.a1
pyrus_communis	pycom07g16990 pycom09g11900 pycom09g11910 pycom15g26750 pycom17g19210
rosa_chinensis	RchiOBHm_Chr2g0109591 RchiOBHm_Chr2g0140711
rosa_laevigata	RLG00000017748 RLG00000019894
rosa_multiflora	Rmu_sc0000332.1_g000047 Rmu_sc0003342.1_g000014
rosa_roxburghii	Rroxscaffold_2G00134120
rosa_rugosa	Rorug02G0160900 Rorug02G0161000 Rorug02G0364300 Rorug02G0364400 Rorug02G0364500
rosa_samantha	Rh2AG213300 Rh2AG416000 Rh2BG223500 Rh2BG425600 Rh2CG215300 Rh2CG402200 Rh2DG218800 Rh2DG435500
rosa_wichuraiana	Rw2G034040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	157
Acc36I	ACCTGC	1 cut(s)	157
AccBSI	CCGCTC	1 cut(s)	59
AccI	GTMKAC	1 cut(s)	252
AccII	CGCG	1 cut(s)	32
AccIII	TCCGGA	1 cut(s)	81
AclWI	GGATC	1 cut(s)	306
AcoI	YGGCCR	2 cut(s)	36, 607
AcsI	RAATTY	2 cut(s)	371, 455
AcuI	CTGAAG	3 cut(s)	234, 399, 1023
AcvI	CACGTG	1 cut(s)	1211
AcyI	GRCGYC	1 cut(s)	177
AfaI	GTAC	5 cut(s)	754, 760, 962, 1119, 1325
AfiI	CCNNNNNNNGG	3 cut(s)	153, 824, 1212
AflII	CTTAAG	1 cut(s)	1109
AflIII	ACRYGT	2 cut(s)	1074, 1208
AgsI	TTSAA	4 cut(s)	644, 1132, 1276, 1412
AjnI	CCWGG	2 cut(s)	493, 922
AjuI	GAANNNNNNNTTGG	2 cut(s)	1124, 1156
AloI	GAACNNNNNNTCC	2 cut(s)	960, 992
Alw21I	GWGCWC	4 cut(s)	47, 89, 787, 1191
Alw26I	GTCTC	2 cut(s)	388, 1116
Alw44I	GTGCAC	2 cut(s)	43, 783
AlwI	GGATC	1 cut(s)	306
Ama87I	CYCGRG	1 cut(s)	102
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	6 cut(s)	36, 91, 99, 202, 607, 652
ApaI	GGGCCC	1 cut(s)	103
ApaLI	GTGCAC	2 cut(s)	43, 783
ApoI	RAATTY	2 cut(s)	371, 455
AseI	ATTAAT	1 cut(s)	552
Asp700I	GAANNNNTTC	2 cut(s)	584, 975
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	4 cut(s)	99, 100, 144, 561
AsuC2I	CCSGG	2 cut(s)	103, 104
AsuHPI	GGTGA	3 cut(s)	31, 938, 1034
AvaI	CYCGRG	1 cut(s)	102
AvaII	GGWCC	2 cut(s)	144, 561
BaeGI	GKGCMC	3 cut(s)	47, 103, 787
BalI	TGGCCA	1 cut(s)	609
BanII	GRGCYC	4 cut(s)	89, 103, 1191, 1219
BbrPI	CACGTG	1 cut(s)	1211
BbsI	GAAGAC	1 cut(s)	803
Bbv12I	GWGCWC	4 cut(s)	47, 89, 787, 1191
BbvCI	CCTCAGC	2 cut(s)	161, 326
BccI	CCATC	4 cut(s)	122, 1274, 1307, 1418
BceAI	ACGGC	1 cut(s)	23
BciT130I	CCWGG	2 cut(s)	495, 924
BciVI	GTATCC	1 cut(s)	898
BclI	TGATCA	3 cut(s)	237, 892, 928
BcnI	CCSGG	2 cut(s)	103, 104
BcoDI	GTCTC	2 cut(s)	388, 1116
BfaI	CTAG	2 cut(s)	128, 512
BfmI	CTRYAG	1 cut(s)	591
BfrI	CTTAAG	1 cut(s)	1109
BfuAI	ACCTGC	1 cut(s)	157
BfuI	GTATCC	1 cut(s)	898
Bme1390I	CCNGG	4 cut(s)	103, 104, 495, 924
Bme18I	GGWCC	2 cut(s)	144, 561
BmeT110I	CYCGRG	1 cut(s)	102
BmgT120I	GGNCC	4 cut(s)	99, 100, 144, 561
BmiI	GGNNCC	5 cut(s)	101, 145, 146, 562, 563
BmrFI	CCNGG	4 cut(s)	103, 104, 495, 924
BmrI	ACTGGG	1 cut(s)	276
BmsI	GCATC	5 cut(s)	87, 183, 409, 589, 1096
BmuI	ACTGGG	1 cut(s)	276
BpiI	GAAGAC	1 cut(s)	803
BpmI	CTGGAG	2 cut(s)	726, 846
Bpu10I	CCTNAGC	3 cut(s)	88, 161, 326
BpuEI	CTTGAG	1 cut(s)	215
BpuMI	CCSGG	2 cut(s)	103, 104
BsaAI	YACGTR	1 cut(s)	1211
BsaHI	GRCGYC	1 cut(s)	177
BsaI	GGTCTC	1 cut(s)	388
BsaJI	CCNNGG	5 cut(s)	30, 102, 180, 922, 1474
BsaWI	WCCGGW	1 cut(s)	81
BsaXI	ACNNNNNCTCC	6 cut(s)	819, 849, 960, 990, 1374, 1404
Bsc4I	CCNNNNNNNGG	3 cut(s)	153, 824, 1212
Bse118I	RCCGGY	2 cut(s)	93, 200
Bse1I	ACTGG	1 cut(s)	271
Bse3DI	GCAATG	2 cut(s)	435, 1089
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	2 cut(s)	495, 924
BseDI	CCNNGG	5 cut(s)	30, 102, 180, 922, 1474
BseGI	GGATG	5 cut(s)	78, 733, 1097, 1285, 1318
BseLI	CCNNNNNNNGG	3 cut(s)	153, 824, 1212
BseMI	GCAATG	2 cut(s)	435, 1089
BseMII	CTCAG	4 cut(s)	102, 152, 317, 1386
BseNI	ACTGG	1 cut(s)	271
BseRI	GAGGAG	1 cut(s)	146
BseSI	GKGCMC	3 cut(s)	47, 103, 787
BseX3I	CGGCCG	1 cut(s)	36
Bsh1236I	CGCG	1 cut(s)	32
Bsh1285I	CGRYCG	1 cut(s)	39
BshFI	GGCC	6 cut(s)	38, 93, 101, 204, 609, 654
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	4 cut(s)	47, 89, 787, 1191
BsiHKCI	CYCGRG	1 cut(s)	102
BsiSI	CCGG	4 cut(s)	82, 94, 103, 201
BslFI	GGGAC	6 cut(s)	157, 283, 424, 574, 709, 1034
BslI	CCNNNNNNNGG	3 cut(s)	153, 824, 1212
BsmAI	GTCTC	2 cut(s)	388, 1116
BsmFI	GGGAC	6 cut(s)	157, 283, 424, 574, 709, 1034
BsmI	GAATGC	1 cut(s)	1271
BsnI	GGCC	6 cut(s)	38, 93, 101, 204, 609, 654
Bso31I	GGTCTC	1 cut(s)	388
BsoBI	CYCGRG	1 cut(s)	102
Bsp120I	GGGCCC	1 cut(s)	99
Bsp1286I	GDGCHC	6 cut(s)	47, 89, 103, 787, 1191, 1219
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	5 cut(s)	237, 298, 892, 928, 1105
Bsp19I	CCATGG	1 cut(s)	180
BspANI	GGCC	6 cut(s)	38, 93, 101, 204, 609, 654
BspCNI	CTCAG	4 cut(s)	101, 153, 318, 1387
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	1 cut(s)	32
BspHI	TCATGA	1 cut(s)	1090
BspLI	GGNNCC	5 cut(s)	101, 145, 146, 562, 563
BspMI	ACCTGC	1 cut(s)	157
BspPI	GGATC	1 cut(s)	306
BspTI	CTTAAG	1 cut(s)	1109
BspTNI	GGTCTC	1 cut(s)	388
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	2 cut(s)	435, 1089
BsrFI	RCCGGY	2 cut(s)	93, 200
BsrI	ACTGG	1 cut(s)	271
BssAI	RCCGGY	2 cut(s)	93, 200
BssECI	CCNNGG	5 cut(s)	30, 102, 180, 922, 1474
BssMI	GATC	5 cut(s)	237, 298, 892, 928, 1105
BssNI	GRCGYC	1 cut(s)	177
BssT1I	CCWWGG	2 cut(s)	180, 1474
Bst2UI	CCWGG	2 cut(s)	495, 924
Bst4CI	ACNGT	4 cut(s)	426, 691, 1030, 1300
BstACI	GRCGYC	1 cut(s)	177
BstAFI	CTTAAG	1 cut(s)	1109
BstAPI	GCANNNNNTGC	1 cut(s)	449
BstBAI	YACGTR	1 cut(s)	1211
BstC8I	GCNNGC	5 cut(s)	198, 202, 227, 500, 1219
BstDEI	CTNAG	5 cut(s)	88, 161, 326, 1367, 1395
BstDSI	CCRYGG	2 cut(s)	30, 180
BstF5I	GGATG	5 cut(s)	78, 733, 1097, 1285, 1318
BstFNI	CGCG	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	72
BstKTI	GATC	5 cut(s)	240, 301, 895, 931, 1108
BstMAI	GTCTC	2 cut(s)	388, 1116
BstMBI	GATC	5 cut(s)	237, 298, 892, 928, 1105
BstMCI	CGRYCG	1 cut(s)	39
BstMWI	GCNNNNNNNGC	8 cut(s)	56, 84, 206, 331, 449, 1007, 1223, 1451
BstNI	CCWGG	2 cut(s)	495, 924
BstNSI	RCATGY	2 cut(s)	791, 1078
BstSCI	CCNGG	4 cut(s)	101, 102, 493, 922
BstSFI	CTRYAG	1 cut(s)	591
BstSLI	GKGCMC	3 cut(s)	47, 103, 787
BstUI	CGCG	1 cut(s)	32
BstV2I	GAAGAC	1 cut(s)	803
BstX2I	RGATCY	1 cut(s)	298
BstXI	CCANNNNNNTGG	1 cut(s)	187
BstYI	RGATCY	1 cut(s)	298
BstZI	CGGCCG	1 cut(s)	36
BsuI	GTATCC	1 cut(s)	898
BsuRI	GGCC	6 cut(s)	38, 93, 101, 204, 609, 654
BtgI	CCRYGG	2 cut(s)	30, 180
BtsCI	GGATG	5 cut(s)	78, 733, 1097, 1285, 1318
BtsI	GCAGTG	1 cut(s)	21
BtsIMutI	CAGTG	4 cut(s)	21, 422, 1026, 1305
BveI	ACCTGC	1 cut(s)	157
Cac8I	GCNNGC	5 cut(s)	198, 202, 227, 500, 1219
CciI	TCATGA	1 cut(s)	1090
CfoI	GCGC	1 cut(s)	72
Cfr10I	RCCGGY	2 cut(s)	93, 200
Cfr13I	GGNCC	4 cut(s)	99, 100, 144, 561
Cfr42I	CCGCGG	1 cut(s)	33
Cfr9I	CCCGGG	1 cut(s)	102
CseI	GACGC	2 cut(s)	185, 1277
Csp6I	GTAC	5 cut(s)	753, 759, 961, 1118, 1324
CviAII	CATG	7 cut(s)	181, 788, 806, 844, 1075, 1091, 1354
CviQI	GTAC	5 cut(s)	753, 759, 961, 1118, 1324
DdeI	CTNAG	5 cut(s)	88, 161, 326, 1367, 1395
DpnI	GATC	5 cut(s)	239, 300, 894, 930, 1107
DpnII	GATC	5 cut(s)	237, 298, 892, 928, 1105
EaeI	YGGCCR	2 cut(s)	36, 607
EagI	CGGCCG	1 cut(s)	36
Ecl136II	GAGCTC	2 cut(s)	87, 1189
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	2 cut(s)	180, 1474
Eco147I	AGGCCT	1 cut(s)	654
Eco24I	GRGCYC	4 cut(s)	89, 103, 1191, 1219
Eco31I	GGTCTC	1 cut(s)	388
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	2 cut(s)	144, 561
Eco52I	CGGCCG	1 cut(s)	36
Eco53kI	GAGCTC	2 cut(s)	87, 1189
Eco57I	CTGAAG	3 cut(s)	234, 399, 1023
Eco72I	CACGTG	1 cut(s)	1211
Eco88I	CYCGRG	1 cut(s)	102
EcoICRI	GAGCTC	2 cut(s)	87, 1189
EcoO109I	RGGNCCY	2 cut(s)	144, 561
EcoRII	CCWGG	2 cut(s)	493, 922
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	2 cut(s)	180, 1474
EcoT22I	ATGCAT	2 cut(s)	295, 1089
EcoT38I	GRGCYC	4 cut(s)	89, 103, 1191, 1219
ErhI	CCWWGG	2 cut(s)	180, 1474
FaeI	CATG	7 cut(s)	184, 791, 809, 847, 1078, 1094, 1357
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FaqI	GGGAC	6 cut(s)	157, 283, 424, 574, 709, 1034
FatI	CATG	7 cut(s)	180, 787, 805, 843, 1074, 1090, 1353
FauI	CCCGC	1 cut(s)	134
FauNDI	CATATG	1 cut(s)	772
FbaI	TGATCA	3 cut(s)	237, 892, 928
FblI	GTMKAC	1 cut(s)	252
FokI	GGATG	5 cut(s)	65, 740, 1084, 1292, 1325
FriOI	GRGCYC	4 cut(s)	89, 103, 1191, 1219
FspBI	CTAG	2 cut(s)	128, 512
GlaI	GCGC	1 cut(s)	71
GsuI	CTGGAG	2 cut(s)	726, 846
HaeIII	GGCC	6 cut(s)	38, 93, 101, 204, 609, 654
HapII	CCGG	4 cut(s)	82, 94, 103, 201
HgaI	GACGC	2 cut(s)	185, 1277
HhaI	GCGC	1 cut(s)	72
Hin1I	GRCGYC	1 cut(s)	177
Hin1II	CATG	7 cut(s)	184, 791, 809, 847, 1078, 1094, 1357
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	1 cut(s)	253
HindII	GTYRAC	1 cut(s)	253
HindIII	AAGCTT	2 cut(s)	913, 1008
HinfI	GANTC	2 cut(s)	1479, 1487
HpaII	CCGG	4 cut(s)	82, 94, 103, 201
HphI	GGTGA	3 cut(s)	31, 938, 1034
Hpy166II	GTNNAC	4 cut(s)	45, 253, 576, 785
Hpy188I	TCNGA	6 cut(s)	214, 418, 933, 1105, 1251, 1396
Hpy188III	TCNNGA	9 cut(s)	82, 232, 368, 392, 476, 825, 954, 1091, 1491
Hpy8I	GTNNAC	4 cut(s)	45, 253, 576, 785
HpyAV	CCTTC	8 cut(s)	4, 209, 340, 464, 532, 574, 884, 1457
HpyCH4III	ACNGT	4 cut(s)	426, 691, 1030, 1300
HpyCH4IV	ACGT	2 cut(s)	781, 1210
HpyF10VI	GCNNNNNNNGC	8 cut(s)	56, 84, 206, 331, 449, 1007, 1223, 1451
HpyF3I	CTNAG	5 cut(s)	88, 161, 326, 1367, 1395
HpySE526I	ACGT	2 cut(s)	781, 1210
Hsp92I	GRCGYC	1 cut(s)	177
Hsp92II	CATG	7 cut(s)	184, 791, 809, 847, 1078, 1094, 1357
HspAI	GCGC	1 cut(s)	70
KflI	GGGWCCC	2 cut(s)	144, 561
Kpn2I	TCCGGA	1 cut(s)	81
KroI	GCCGGC	1 cut(s)	200
KroNI	GCCGGC	1 cut(s)	202
Ksp22I	TGATCA	3 cut(s)	237, 892, 928
KspI	CCGCGG	1 cut(s)	33
Kzo9I	GATC	5 cut(s)	237, 298, 892, 928, 1105
LmnI	GCTCC	3 cut(s)	84, 1186, 1439
LweI	GCATC	5 cut(s)	87, 183, 409, 589, 1096
MaeI	CTAG	2 cut(s)	128, 512
MaeII	ACGT	2 cut(s)	781, 1210
MaeIII	GTNAC	1 cut(s)	1022
MalI	GATC	5 cut(s)	239, 300, 894, 930, 1107
MbiI	CCGCTC	1 cut(s)	59
MboI	GATC	5 cut(s)	237, 298, 892, 928, 1105
MboII	GAAGA	4 cut(s)	19, 803, 1016, 1144
MfeI	CAATTG	1 cut(s)	335
MflI	RGATCY	1 cut(s)	298
MhlI	GDGCHC	6 cut(s)	47, 89, 103, 787, 1191, 1219
MlsI	TGGCCA	1 cut(s)	609
MluNI	TGGCCA	1 cut(s)	609
MlyI	GAGTC	1 cut(s)	1488
Mox20I	TGGCCA	1 cut(s)	609
Mph1103I	ATGCAT	2 cut(s)	295, 1089
MroI	TCCGGA	1 cut(s)	81
MroNI	GCCGGC	1 cut(s)	200
MroXI	GAANNNNTTC	2 cut(s)	584, 975
MscI	TGGCCA	1 cut(s)	609
MseI	TTAA	9 cut(s)	552, 570, 681, 861, 881, 917, 1043, 1110, 1164
MslI	CAYNNNNRTG	3 cut(s)	185, 1335, 1419
Msp20I	TGGCCA	1 cut(s)	609
MspA1I	CMGCKG	1 cut(s)	32
MspCI	CTTAAG	1 cut(s)	1109
MspI	CCGG	4 cut(s)	82, 94, 103, 201
MspR9I	CCNGG	4 cut(s)	103, 104, 495, 924
MunI	CAATTG	1 cut(s)	335
Mva1269I	GAATGC	1 cut(s)	1271
MvaI	CCWGG	2 cut(s)	495, 924
MvnI	CGCG	1 cut(s)	32
MwoI	GCNNNNNNNGC	8 cut(s)	56, 84, 206, 331, 449, 1007, 1223, 1451
NaeI	GCCGGC	1 cut(s)	202
NciI	CCSGG	2 cut(s)	103, 104
NcoI	CCATGG	1 cut(s)	180
NdeI	CATATG	1 cut(s)	772
NdeII	GATC	5 cut(s)	237, 298, 892, 928, 1105
NgoMIV	GCCGGC	1 cut(s)	200
NlaIII	CATG	7 cut(s)	184, 791, 809, 847, 1078, 1094, 1357
NlaIV	GGNNCC	5 cut(s)	101, 145, 146, 562, 563
NmuCI	GTSAC	1 cut(s)	1022
NsiI	ATGCAT	2 cut(s)	295, 1089
NspI	RCATGY	2 cut(s)	791, 1078
PagI	TCATGA	1 cut(s)	1090
PaqCI	CACCTGC	1 cut(s)	157
PceI	AGGCCT	1 cut(s)	654
PciI	ACATGT	1 cut(s)	1074
PctI	GAATGC	1 cut(s)	1271
PdiI	GCCGGC	1 cut(s)	202
PdmI	GAANNNNTTC	2 cut(s)	584, 975
PfeI	GAWTC	1 cut(s)	1487
PleI	GAGTC	1 cut(s)	1487
PmaCI	CACGTG	1 cut(s)	1211
PmlI	CACGTG	1 cut(s)	1211
PpsI	GAGTC	1 cut(s)	1487
Ppu21I	YACGTR	1 cut(s)	1211
PpuMI	RGGWCCY	2 cut(s)	144, 561
PscI	ACATGT	1 cut(s)	1074
PshBI	ATTAAT	1 cut(s)	552
Psp124BI	GAGCTC	2 cut(s)	89, 1191
Psp5II	RGGWCCY	2 cut(s)	144, 561
Psp6I	CCWGG	2 cut(s)	493, 922
PspCI	CACGTG	1 cut(s)	1211
PspGI	CCWGG	2 cut(s)	493, 922
PspN4I	GGNNCC	5 cut(s)	101, 145, 146, 562, 563
PspOMI	GGGCCC	1 cut(s)	99
PspPI	GGNCC	4 cut(s)	99, 100, 144, 561
PspPPI	RGGWCCY	2 cut(s)	144, 561
PsuI	RGATCY	1 cut(s)	298
RsaI	GTAC	5 cut(s)	754, 760, 962, 1119, 1325
RsaNI	GTAC	5 cut(s)	753, 759, 961, 1118, 1324
RseI	CAYNNNNRTG	3 cut(s)	185, 1335, 1419
SacI	GAGCTC	2 cut(s)	89, 1191
SacII	CCGCGG	1 cut(s)	33
SalI	GTCGAC	1 cut(s)	251
SaqAI	TTAA	9 cut(s)	552, 570, 681, 861, 881, 917, 1043, 1110, 1164
Sau3AI	GATC	5 cut(s)	237, 298, 892, 928, 1105
Sau96I	GGNCC	4 cut(s)	99, 100, 144, 561
SchI	GAGTC	1 cut(s)	1488
ScrFI	CCNGG	4 cut(s)	103, 104, 495, 924
SduI	GDGCHC	6 cut(s)	47, 89, 103, 787, 1191, 1219
SfaNI	GCATC	5 cut(s)	87, 183, 409, 589, 1096
SfcI	CTRYAG	1 cut(s)	591
Sfr303I	CCGCGG	1 cut(s)	33
SgrBI	CCGCGG	1 cut(s)	33
SinI	GGWCC	2 cut(s)	144, 561
SmaI	CCCGGG	1 cut(s)	104
SmiMI	CAYNNNNRTG	3 cut(s)	185, 1335, 1419
SmlI	CTYRAG	2 cut(s)	230, 1109
SmoI	CTYRAG	2 cut(s)	230, 1109
SrfI	GCCCGGGC	1 cut(s)	104
SseBI	AGGCCT	1 cut(s)	654
SspMI	CTAG	2 cut(s)	128, 512
SstI	GAGCTC	2 cut(s)	89, 1191
StuI	AGGCCT	1 cut(s)	654
StyD4I	CCNGG	4 cut(s)	101, 102, 493, 922
StyI	CCWWGG	2 cut(s)	180, 1474
TaaI	ACNGT	4 cut(s)	426, 691, 1030, 1300
TaiI	ACGT	2 cut(s)	784, 1213
TaqI	TCGA	2 cut(s)	252, 1482
TatI	WGTACW	1 cut(s)	960
TauI	GCSGC	4 cut(s)	35, 38, 56, 59
TfiI	GAWTC	1 cut(s)	1487
Tru1I	TTAA	9 cut(s)	552, 570, 681, 861, 881, 917, 1043, 1110, 1164
Tru9I	TTAA	9 cut(s)	552, 570, 681, 861, 881, 917, 1043, 1110, 1164
TscAI	CASTG	4 cut(s)	21, 429, 1033, 1305
TseFI	GTSAC	1 cut(s)	1022
Tsp45I	GTSAC	1 cut(s)	1022
TspDTI	ATGAA	2 cut(s)	1045, 1353
TspGWI	ACGGA	1 cut(s)	308
TspMI	CCCGGG	1 cut(s)	102
TspRI	CASTG	4 cut(s)	21, 429, 1033, 1305
Vha464I	CTTAAG	1 cut(s)	1109
VneI	GTGCAC	2 cut(s)	43, 783
VpaK11BI	GGWCC	2 cut(s)	144, 561
VspI	ATTAAT	1 cut(s)	552
XapI	RAATTY	2 cut(s)	371, 455
XceI	RCATGY	2 cut(s)	791, 1078
XmaI	CCCGGG	1 cut(s)	102
XmiI	GTMKAC	1 cut(s)	252
XmnI	GAANNNNTTC	2 cut(s)	584, 975
XspI	CTAG	2 cut(s)	128, 512
Zsp2I	ATGCAT	2 cut(s)	295, 1089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.