Rorug02G0160900

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002903
Physical Location & Seq
Reverse (-)
14391699 .. 14394623
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0160900.1

Sequence Viewer

Length: 1581 bp
ATGCAATCATCTTTCTATGCAGCCTCCAACTCCCACCACTTCCTCCTCTCATGGAAAACCCCACAACCCCAATTCACACCCCGCAAGCCACTCCCCAGGAAGCTCCGTACCACCTTCAAAGCCCCAACCTTTACCAACTCCCTCAGAACCTCAATTGGGTACGAACCGGAAGAAGGCCTCGGAGAAGACCCGGGTCCTTCAACGCCGCCGGGTCGGCTTCCGGTCGTGATTCGGAGGTCGGGTCGGGTTTCCAGGTACTTCTGGGATGGGGAGTGTTTGCAATTAGTCGGTGTTGATGGCCGTGCGGCGTCGTTTGGTTTGGATTTCGATGATGGGTTTCGGAAATTTTATAGAGTCTGTAGTTGTGCTGTCAGGGATTTCTTTATTCCCAAGCAAGTTAGTGGGAATTATATGAGCTATGTGAAATGGAAGTTCTTGCACCGCGTTTTTAGCTCTGCGCTGCAGGTTCTTGCTACTCAGGCAATGTTTCGGGCCATTGGGATTGGGTACTCTCGTTCGCTTCCAGCGGCGGCTGCTCTTAACTGGGTCTTGAAGGATGGACTTGGACGGCTGAGTAGGTGCATCTATACTGCTAGTCTAGCGTCTGCTTTTGATACCAATTTGAAGAGAGTTCGGTTTTCAACCTCTGTTCTGTTCACGTTGAGTGTTGGAGTTGAGCTGTTGACACCTGCATATCCTCAGTATTTCCTGCTTCTTGCATCTTTAGCCAACGTTGCAAAACAAATAAGCTTGGCTTGCTATATAGCGACTAGTTCTGCTGTTCATAGAAGCTTTGCAATAGCAGATAATCTTGGTGAACTTTCGGCAAAGGCACAGATTCAAACAGTGTGCTTTGATAACCTTGGCCTTTTGCTTGCTGCATTGTTGAATATGTTGTTGAAGAACAACCAAAGGTTGCAGACAGGCTTGCCCTTTGTTGTATACCCCATCTTCTCAGCACTTGACCTTTGTGGAATATATCAAGGGCTTAAACATGTCCATTTACAAACATTAAGTAAGGATAGACTTGAAATTCTGCTAAATACTTGGATCAAGTTAGGTAAAGTTCCTTCACCTGCAGAAGTGAGTAAAGAAGAAGGAATCGATTTCCTGCGGTGCAAAGACAAAGGATTATGGCCCATCAGAATAGGGTACTTGGATCCAAAGAATCAAATACCCAAGTTATCCATGATGGCGATGAGATCTACTAGTGATGATGATTATTACTTCATATCCATGGAGACATTTTATACAAGAAAACGAAGAACTAAGCAACATGGAATTCTTCTTTGTCTACGGGAAAGAGCCAGCACTCCAGATATTATCAAGGGTCTGTTGCAGGCATGCTATATCCGCAAAGTCCTGCTTATGGACGAGAATAGGTGGGCGGACATGGTAGATGCTAGAGATGCATTAGACTCTGCTCTAAACGAATGGCCAAAATTGATTGATGAGTGCAAACGGCGTGCACAGGGTGATATGTACCTGTTGAATGAACAAATGGTGGCCCGGGGTTGGGCTACTAAGAATATCTTACTGAGTACACAAGAGCAGACTCGATATAGTTTTGTAGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001678 GO:0003674 GO:0003824 GO:0004396 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009411 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010224 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0032787 GO:0033500 GO:0033554 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042592 GO:0042593 GO:0042866 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046939 GO:0048878 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0055082 GO:0055086 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

526

Amino Acids

59.48

Weight (kDa)

9.45

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVB_sens_prot PF04884 123 - 352 1.4e-63 Vitamin B6 photo-protection and homoeostasis domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 697, 1084
Acc36I ACCTGC 3 cut(s) 454, 697, 1084
AccI GTMKAC 2 cut(s) 942, 1294
AccII CGCG 1 cut(s) 444
AciI CCGC 9 cut(s) 82, 206, 305, 442, 527, 530, 1114, 1354, 1388
AclI AACGTT 1 cut(s) 732
AclWI GGATC 3 cut(s) 1058, 1154, 1167
AcoI YGGCCR 2 cut(s) 298, 1436
AcsI RAATTY 3 cut(s) 344, 1032, 1281
AcyI GRCGYC 1 cut(s) 308
AdeI CACNNNGTG 1 cut(s) 1475
AfaI GTAC 7 cut(s) 109, 161, 257, 509, 1154, 1484, 1543
AfiI CCNNNNNNNGG 5 cut(s) 156, 173, 1369, 1515, 1516
AflIII ACRYGT 1 cut(s) 994
AhlI ACTAGT 2 cut(s) 770, 1208
AjnI CCWGG 2 cut(s) 95, 251
AluBI AGCT 6 cut(s) 103, 417, 453, 679, 750, 792
AluI AGCT 6 cut(s) 103, 417, 453, 679, 750, 792
Alw21I GWGCWC 1 cut(s) 1471
Alw26I GTCTC 1 cut(s) 1235
Alw44I GTGCAC 1 cut(s) 1467
AlwI GGATC 3 cut(s) 1058, 1154, 1167
Ama87I CYCGRG 2 cut(s) 190, 1509
AoxI GGCC 7 cut(s) 175, 298, 492, 865, 1136, 1436, 1506
ApaLI GTGCAC 1 cut(s) 1467
ApeKI GCWGC 4 cut(s) 20, 460, 533, 878
ApoI RAATTY 3 cut(s) 344, 1032, 1281
AspLEI GCGC 1 cut(s) 460
AspS9I GGNCC 4 cut(s) 194, 492, 1137, 1507
AsuC2I CCSGG 5 cut(s) 191, 192, 210, 1510, 1511
AsuHPI GGTGA 3 cut(s) 827, 1065, 1487
AvaI CYCGRG 2 cut(s) 190, 1509
AvaII GGWCC 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 1471
BaeI ACNNNNGTAYC 2 cut(s) 499, 532
BalI TGGCCA 1 cut(s) 1438
BamHI GGATCC 1 cut(s) 1159
BarI GAAGNNNNNNTAC 2 cut(s) 1054, 1086
BbsI GAAGAC 1 cut(s) 192
Bbv12I GWGCWC 1 cut(s) 1471
BbvI GCAGC 4 cut(s) 32, 447, 520, 865
BccI CCATC 7 cut(s) 260, 290, 326, 551, 956, 1148, 1186
BceAI ACGGC 3 cut(s) 285, 584, 1478
BciT130I CCWGG 2 cut(s) 97, 253
BcnI CCSGG 5 cut(s) 191, 192, 210, 1510, 1511
BcoDI GTCTC 1 cut(s) 1235
BcuI ACTAGT 2 cut(s) 770, 1208
BfaI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
BfmI CTRYAG 3 cut(s) 358, 461, 1077
BfuAI ACCTGC 3 cut(s) 454, 697, 1084
BglI GCCNNNNNGGC 1 cut(s) 214
BglII AGATCT 1 cut(s) 1202
BisI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
BlsI GCNGC 8 cut(s) 22, 207, 307, 462, 529, 532, 535, 880
Bme1390I CCNGG 7 cut(s) 97, 191, 192, 210, 253, 1510, 1511
Bme18I GGWCC 1 cut(s) 194
BmeT110I CYCGRG 2 cut(s) 190, 1509
BmgT120I GGNCC 4 cut(s) 194, 492, 1137, 1507
BmiI GGNNCC 2 cut(s) 195, 1161
BmrFI CCNGG 7 cut(s) 97, 191, 192, 210, 253, 1510, 1511
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 4 cut(s) 591, 728, 1390, 1399
BmuI ACTGGG 1 cut(s) 553
BoxI GACNNNNGTC 1 cut(s) 192
BpiI GAAGAC 1 cut(s) 192
BpmI CTGGAG 1 cut(s) 1299
BpuMI CCSGG 5 cut(s) 191, 192, 210, 1510, 1511
Bsa29I ATCGAT 1 cut(s) 1104
BsaHI GRCGYC 1 cut(s) 308
BsaJI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BsaWI WCCGGW 2 cut(s) 166, 220
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 5 cut(s) 156, 173, 1369, 1515, 1516
Bse1I ACTGG 1 cut(s) 548
Bse3DI GCAATG 1 cut(s) 489
BseBI CCWGG 2 cut(s) 97, 253
BseCI ATCGAT 1 cut(s) 1104
BseDI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BseGI GGATG 2 cut(s) 271, 562
BseLI CCNNNNNNNGG 5 cut(s) 156, 173, 1369, 1515, 1516
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 6 cut(s) 157, 491, 563, 713, 969, 1529
BseNI ACTGG 1 cut(s) 548
BseRI GAGGAG 1 cut(s) 35
BseSI GKGCMC 1 cut(s) 1471
BseXI GCAGC 4 cut(s) 32, 447, 520, 865
Bsh1236I CGCG 1 cut(s) 444
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BshVI ATCGAT 1 cut(s) 1104
BsiEI CGRYCG 1 cut(s) 225
BsiHKAI GWGCWC 1 cut(s) 1471
BsiHKCI CYCGRG 2 cut(s) 190, 1509
BsiSI CCGG 5 cut(s) 167, 191, 209, 221, 1510
BslI CCNNNNNNNGG 5 cut(s) 156, 173, 1369, 1515, 1516
BsmAI GTCTC 1 cut(s) 1235
BsnI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BsoBI CYCGRG 2 cut(s) 190, 1509
Bsp1286I GDGCHC 1 cut(s) 1471
Bsp143I GATC 3 cut(s) 1050, 1159, 1202
Bsp19I CCATGG 1 cut(s) 1236
BspACI CCGC 9 cut(s) 82, 206, 305, 442, 527, 530, 1114, 1354, 1388
BspANI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BspCNI CTCAG 6 cut(s) 156, 490, 564, 712, 968, 1530
BspDI ATCGAT 1 cut(s) 1104
BspFNI CGCG 1 cut(s) 444
BspLI GGNNCC 2 cut(s) 195, 1161
BspMAI CTGCAG 2 cut(s) 465, 1081
BspMI ACCTGC 3 cut(s) 454, 697, 1084
BspPI GGATC 3 cut(s) 1058, 1154, 1167
BsrDI GCAATG 1 cut(s) 489
BsrI ACTGG 1 cut(s) 548
BssECI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BssMI GATC 3 cut(s) 1050, 1159, 1202
BssNAI GTATAC 1 cut(s) 943
BssNI GRCGYC 1 cut(s) 308
BssT1I CCWWGG 2 cut(s) 862, 1236
Bst1107I GTATAC 1 cut(s) 943
Bst2UI CCWGG 2 cut(s) 97, 253
Bst4CI ACNGT 1 cut(s) 847
Bst6I CTCTTC 1 cut(s) 620
BstACI GRCGYC 1 cut(s) 308
BstC8I GCNNGC 8 cut(s) 86, 757, 876, 929, 1309, 1341, 1345, 1467
BstDEI CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
BstDSI CCRYGG 1 cut(s) 1236
BstF5I GGATG 2 cut(s) 271, 562
BstFNI CGCG 1 cut(s) 444
BstHHI GCGC 1 cut(s) 460
BstKTI GATC 3 cut(s) 1053, 1162, 1205
BstMAI GTCTC 1 cut(s) 1235
BstMBI GATC 3 cut(s) 1050, 1159, 1202
BstMCI CGRYCG 1 cut(s) 225
BstNI CCWGG 2 cut(s) 97, 253
BstNSI RCATGY 2 cut(s) 998, 1347
BstPAI GACNNNNGTC 1 cut(s) 192
BstSCI CCNGG 7 cut(s) 95, 189, 190, 208, 251, 1508, 1509
BstSFI CTRYAG 3 cut(s) 358, 461, 1077
BstSLI GKGCMC 1 cut(s) 1471
BstUI CGCG 1 cut(s) 444
BstV1I GCAGC 4 cut(s) 32, 447, 520, 865
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 2 cut(s) 1159, 1202
BstYI RGATCY 2 cut(s) 1159, 1202
BstZ17I GTATAC 1 cut(s) 943
Bsu15I ATCGAT 1 cut(s) 1104
BsuRI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BsuTUI ATCGAT 1 cut(s) 1104
BtgI CCRYGG 1 cut(s) 1236
BtgZI GCGATG 1 cut(s) 1211
BtsCI GGATG 2 cut(s) 271, 562
BtsIMutI CAGTG 1 cut(s) 852
BveI ACCTGC 3 cut(s) 454, 697, 1084
Cac8I GCNNGC 8 cut(s) 86, 757, 876, 929, 1309, 1341, 1345, 1467
CfoI GCGC 1 cut(s) 460
Cfr13I GGNCC 4 cut(s) 194, 492, 1137, 1507
Cfr9I CCCGGG 2 cut(s) 190, 1509
ClaI ATCGAT 1 cut(s) 1104
CseI GACGC 2 cut(s) 297, 591
Csp6I GTAC 7 cut(s) 108, 160, 256, 508, 1153, 1483, 1542
CviAII CATG 7 cut(s) 51, 995, 1189, 1237, 1277, 1344, 1393
CviQI GTAC 7 cut(s) 108, 160, 256, 508, 1153, 1483, 1542
DdeI CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
DpnI GATC 3 cut(s) 1052, 1161, 1204
DpnII GATC 3 cut(s) 1050, 1159, 1202
DraIII CACNNNGTG 1 cut(s) 1475
EaeI YGGCCR 2 cut(s) 298, 1436
Eam1104I CTCTTC 1 cut(s) 620
EarI CTCTTC 1 cut(s) 620
EciI GGCGGA 1 cut(s) 1403
Eco130I CCWWGG 2 cut(s) 862, 1236
Eco147I AGGCCT 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 194
Eco88I CYCGRG 2 cut(s) 190, 1509
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 1281
EcoRII CCWGG 2 cut(s) 95, 251
EcoT14I CCWWGG 2 cut(s) 862, 1236
EcoT22I ATGCAT 1 cut(s) 1414
ErhI CCWWGG 2 cut(s) 862, 1236
FaeI CATG 7 cut(s) 54, 998, 1192, 1240, 1280, 1347, 1396
FalI AAGNNNNNCTT 6 cut(s) 739, 771, 1350, 1382, 1517, 1549
FatI CATG 7 cut(s) 50, 994, 1188, 1236, 1276, 1343, 1392
FauI CCCGC 1 cut(s) 89
FblI GTMKAC 2 cut(s) 942, 1294
Fnu4HI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
FokI GGATG 2 cut(s) 278, 569
Fsp4HI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
FspBI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
GlaI GCGC 1 cut(s) 459
GluI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
GsuI CTGGAG 1 cut(s) 1299
HaeIII GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
HapII CCGG 5 cut(s) 167, 191, 209, 221, 1510
HgaI GACGC 2 cut(s) 297, 591
HhaI GCGC 1 cut(s) 460
Hin1I GRCGYC 1 cut(s) 308
Hin1II CATG 7 cut(s) 54, 998, 1192, 1240, 1280, 1347, 1396
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HincII GTYRAC 1 cut(s) 684
HindII GTYRAC 1 cut(s) 684
HindIII AAGCTT 2 cut(s) 748, 790
HinfI GANTC 7 cut(s) 229, 354, 838, 1101, 1168, 1418, 1555
HpaII CCGG 5 cut(s) 167, 191, 209, 221, 1510
HphI GGTGA 3 cut(s) 827, 1065, 1487
Hpy166II GTNNAC 7 cut(s) 657, 684, 818, 943, 1295, 1469, 1544
Hpy188I TCNGA 5 cut(s) 146, 182, 234, 342, 1145
Hpy188III TCNNGA 3 cut(s) 226, 550, 1316
Hpy8I GTNNAC 7 cut(s) 657, 684, 818, 943, 1295, 1469, 1544
Hpy99I CGWCG 1 cut(s) 313
HpyAV CCTTC 6 cut(s) 124, 167, 207, 547, 1080, 1091
HpyCH4III ACNGT 1 cut(s) 847
HpyCH4IV ACGT 2 cut(s) 659, 732
HpyF3I CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
HpySE526I ACGT 2 cut(s) 659, 732
Hsp92I GRCGYC 1 cut(s) 308
Hsp92II CATG 7 cut(s) 54, 998, 1192, 1240, 1280, 1347, 1396
HspAI GCGC 1 cut(s) 458
Kzo9I GATC 3 cut(s) 1050, 1159, 1202
LmnI GCTCC 1 cut(s) 108
Lsp1109I GCAGC 4 cut(s) 32, 447, 520, 865
LweI GCATC 4 cut(s) 591, 728, 1390, 1399
MaeI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
MaeII ACGT 2 cut(s) 659, 732
MalI GATC 3 cut(s) 1052, 1161, 1204
MboI GATC 3 cut(s) 1050, 1159, 1202
MboII GAAGA 8 cut(s) 182, 197, 637, 913, 943, 1106, 1275, 1277
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 2 cut(s) 1159, 1202
MhlI GDGCHC 1 cut(s) 1471
MlsI TGGCCA 1 cut(s) 1438
MluCI AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
MluNI TGGCCA 1 cut(s) 1438
MlyI GAGTC 3 cut(s) 363, 1412, 1549
MmeI TCCRAC 2 cut(s) 51, 649
MnlI CCTC 9 cut(s) 34, 53, 56, 152, 160, 188, 228, 655, 708
Mox20I TGGCCA 1 cut(s) 1438
Mph1103I ATGCAT 1 cut(s) 1414
MscI TGGCCA 1 cut(s) 1438
MseI TTAA 3 cut(s) 540, 990, 1013
MslI CAYNNNNRTG 1 cut(s) 1235
Msp20I TGGCCA 1 cut(s) 1438
MspA1I CMGCKG 1 cut(s) 527
MspI CCGG 5 cut(s) 167, 191, 209, 221, 1510
MspR9I CCNGG 7 cut(s) 97, 191, 192, 210, 253, 1510, 1511
MunI CAATTG 1 cut(s) 153
MvaI CCWGG 2 cut(s) 97, 253
MvnI CGCG 1 cut(s) 444
NciI CCSGG 5 cut(s) 191, 192, 210, 1510, 1511
NcoI CCATGG 1 cut(s) 1236
NdeII GATC 3 cut(s) 1050, 1159, 1202
NlaIII CATG 7 cut(s) 54, 998, 1192, 1240, 1280, 1347, 1396
NlaIV GGNNCC 2 cut(s) 195, 1161
NsiI ATGCAT 1 cut(s) 1414
NspI RCATGY 2 cut(s) 998, 1347
PaeI GCATGC 1 cut(s) 1347
PaqCI CACCTGC 2 cut(s) 697, 1084
PceI AGGCCT 1 cut(s) 177
PciI ACATGT 1 cut(s) 994
PfeI GAWTC 4 cut(s) 229, 838, 1101, 1168
PkrI GCNGC 8 cut(s) 22, 207, 307, 462, 529, 532, 535, 880
PleI GAGTC 3 cut(s) 362, 1412, 1549
PpsI GAGTC 3 cut(s) 362, 1412, 1549
PpuMI RGGWCCY 1 cut(s) 194
PscI ACATGT 1 cut(s) 994
PshAI GACNNNNGTC 1 cut(s) 192
Psp1406I AACGTT 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 2 cut(s) 95, 251
PspGI CCWGG 2 cut(s) 95, 251
PspN4I GGNNCC 2 cut(s) 195, 1161
PspPI GGNCC 4 cut(s) 194, 492, 1137, 1507
PspPPI RGGWCCY 1 cut(s) 194
PstI CTGCAG 2 cut(s) 465, 1081
PsuI RGATCY 2 cut(s) 1159, 1202
RsaI GTAC 7 cut(s) 109, 161, 257, 509, 1154, 1484, 1543
RsaNI GTAC 7 cut(s) 108, 160, 256, 508, 1153, 1483, 1542
RseI CAYNNNNRTG 1 cut(s) 1235
SaqAI TTAA 3 cut(s) 540, 990, 1013
SatI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
Sau3AI GATC 3 cut(s) 1050, 1159, 1202
Sau96I GGNCC 4 cut(s) 194, 492, 1137, 1507
SchI GAGTC 3 cut(s) 363, 1412, 1549
ScrFI CCNGG 7 cut(s) 97, 191, 192, 210, 253, 1510, 1511
SduI GDGCHC 1 cut(s) 1471
SfaNI GCATC 4 cut(s) 591, 728, 1390, 1399
SfcI CTRYAG 3 cut(s) 358, 461, 1077
SinI GGWCC 1 cut(s) 194
SmaI CCCGGG 2 cut(s) 192, 1511
SmiMI CAYNNNNRTG 1 cut(s) 1235
SpeI ACTAGT 2 cut(s) 770, 1208
SphI GCATGC 1 cut(s) 1347
Sse9I AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
SseBI AGGCCT 1 cut(s) 177
SsiI CCGC 9 cut(s) 82, 206, 305, 442, 527, 530, 1114, 1354, 1388
SspMI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
StuI AGGCCT 1 cut(s) 177
StyD4I CCNGG 7 cut(s) 95, 189, 190, 208, 251, 1508, 1509
StyI CCWWGG 2 cut(s) 862, 1236
TaaI ACNGT 1 cut(s) 847
TaiI ACGT 2 cut(s) 662, 735
TaqI TCGA 3 cut(s) 327, 1104, 1558
TasI AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
TatI WGTACW 1 cut(s) 1541
TauI GCSGC 4 cut(s) 208, 308, 530, 533
TfiI GAWTC 4 cut(s) 229, 838, 1101, 1168
Tru1I TTAA 3 cut(s) 540, 990, 1013
Tru9I TTAA 3 cut(s) 540, 990, 1013
TscAI CASTG 1 cut(s) 852
TseI GCWGC 4 cut(s) 20, 460, 533, 878
TspDTI ATGAA 3 cut(s) 773, 1219, 1509
TspGWI ACGGA 1 cut(s) 95
TspMI CCCGGG 2 cut(s) 190, 1509
TspRI CASTG 1 cut(s) 852
VneI GTGCAC 1 cut(s) 1467
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 3 cut(s) 344, 1032, 1281
XceI RCATGY 2 cut(s) 998, 1347
XmaI CCCGGG 2 cut(s) 190, 1509
XmiI GTMKAC 2 cut(s) 942, 1294
XspI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
Zsp2I ATGCAT 1 cut(s) 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.