Rh2DG218800

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0002903
Physical Location & Seq
Reverse (-)
21018384 .. 21022246
3863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG218800.1

Sequence Viewer

Length: 1089 bp
ATGAGGAAGGAGGTGGTGGCAGCAGCAGCATTGACCGCAGCCGCTGCAATAACAGCCATAGCTGCCTTAGTGAGGCAGAGGAAGCGCTGGAGAGAGCAACAATGGAAAGAAACGCAGAAAATTCTACGCAAATTCGCCAGAGATTGCGCCACTCCAGTGCCAAAGCTATGGCAGGTGGCAAATGCTTTCGTCGCCGACATGCGAAGTTCCCTCATAGCTTCCAATGGAACTCACACAAGTCTCAATATGCTGGTTTCCTATGTTGCTTCACTCCCATCTGGAGATGAGGAAGGAATGTATTATGGGGTGAATTTGCGGCGGACCAACGTCTTGCTCTTGTGTGCAAAACTTCGAGGGAAGAATGATCCCATTTCTGATTTTCATAGGGAGGAGATTCACATTCCGACTAATCTCTTGGATGGTACTGGTAGTACGAAGGAATTGTTTGATTTTATTGCTGTGGAGCTGGGGAAGTTTGTTGAAGCACATCCAAATAGTGAAAAAAAGGATGCACCAGCCAAGTACAACAAGCTGGGTTTTATAATGTCATGTCCGGTGGACCAAGCTGTGGCCACTTCTGGAACCGCCATCACATGGAAGAGTTTCGAGGCGGATAGCACACTGGGAAAGAAGTTGGTGAGTGACTTCAATAGAGCTCTGGAGGAACGTGGAGTAAAATTGAGTGTTTATGCAATGGTTGATGATACTGTAGGGACTTTGGCTGGAGGCAGATACTATAACAGAGAAAGTGTGGCCGCAGTTACTCTAGGGATGGGTACAGATGCTGCTTATGTAGAGCCTGCAGATGCAGCTCTGCAGTGGCATGGTCCGTCGCCTAAGTTAGGCGAGATGGTAATTAGCACACAGTGGGGAGAATTCAGTACTCCTCATCTTCCAATAACAATCTTTGATACTTGTCTAGATGCTGAAAGCTCAAATCCTGGATTCCGGAGATTTGAGAAGTTGGTTTCCGGAATGTATTTGGGAGAGGTTGTGAGAAGAGTATTACTGAAGATGGCAAAGGAAACAGCATTATTTGGCAAACGTGTTGTGCCTTCAAAACTCATGACTCCTTACCAACTCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001678 GO:0003674 GO:0003824 GO:0004396 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009411 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010224 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0032787 GO:0033500 GO:0033554 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042592 GO:0042593 GO:0042866 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046939 GO:0048878 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0055082 GO:0055086 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

362

Amino Acids

39.93

Weight (kDa)

9.1

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hexokinase_1 PF00349 42 - 245 2.6e-45 Hexokinase
Hexokinase_2 PF03727 252 - 361 3.1e-31 Hexokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 542
AarI CACCTGC 1 cut(s) 163
Acc36I ACCTGC 1 cut(s) 163
AccB7I CCANNNNNTGG 2 cut(s) 568, 594
AccIII TCCGGA 2 cut(s) 948, 971
AciI CCGC 7 cut(s) 36, 42, 316, 319, 585, 611, 756
AclWI GGATC 1 cut(s) 359
AcoI YGGCCR 2 cut(s) 570, 753
AcsI RAATTY 4 cut(s) 120, 131, 310, 875
AcuI CTGAAG 1 cut(s) 1031
AdeI CACNNNGTG 1 cut(s) 867
AfaI GTAC 5 cut(s) 424, 433, 524, 778, 883
AfeI AGCGCT 1 cut(s) 86
AfiI CCNNNNNNNGG 4 cut(s) 72, 568, 594, 842
AflIII ACRYGT 1 cut(s) 1045
AgsI TTSAA 3 cut(s) 482, 649, 1059
AjnI CCWGG 1 cut(s) 940
AleI CACNNNNGTG 1 cut(s) 155
AluBI AGCT 9 cut(s) 62, 166, 218, 466, 532, 566, 656, 812, 933
AluI AGCT 9 cut(s) 62, 166, 218, 466, 532, 566, 656, 812, 933
Alw21I GWGCWC 1 cut(s) 658
Alw26I GTCTC 1 cut(s) 245
AlwI GGATC 1 cut(s) 359
AlwNI CAGNNNCTG 2 cut(s) 44, 785
Aor13HI TCCGGA 2 cut(s) 948, 971
Aor51HI AGCGCT 1 cut(s) 86
AoxI GGCC 2 cut(s) 570, 753
ApeKI GCWGC 8 cut(s) 20, 23, 26, 38, 44, 62, 785, 809
ApoI RAATTY 4 cut(s) 120, 131, 310, 875
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 2 cut(s) 87, 149
AspS9I GGNCC 3 cut(s) 321, 559, 827
AsuHPI GGTGA 2 cut(s) 319, 649
AvaII GGWCC 3 cut(s) 321, 559, 827
BalI TGGCCA 1 cut(s) 572
BanII GRGCYC 1 cut(s) 658
Bbv12I GWGCWC 1 cut(s) 658
BbvI GCAGC 8 cut(s) 31, 32, 35, 38, 49, 50, 772, 821
BccI CCATC 6 cut(s) 283, 413, 596, 766, 844, 1009
BciT130I CCWGG 1 cut(s) 942
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 2 cut(s) 767, 920
BfmI CTRYAG 3 cut(s) 708, 801, 815
BfoI RGCGCY 1 cut(s) 88
BfuAI ACCTGC 1 cut(s) 163
BmcAI AGTACT 1 cut(s) 883
Bme1390I CCNGG 1 cut(s) 942
Bme18I GGWCC 3 cut(s) 321, 559, 827
BmgT120I GGNCC 3 cut(s) 321, 559, 827
BmiI GGNNCC 1 cut(s) 583
BmrFI CCNGG 1 cut(s) 942
BmrI ACTGGG 1 cut(s) 632
BmsI GCATC 4 cut(s) 499, 772, 796, 913
BmuI ACTGGG 1 cut(s) 632
BoxI GACNNNNGTC 1 cut(s) 326
BpmI CTGGAG 5 cut(s) 109, 138, 300, 680, 744
BsaWI WCCGGW 3 cut(s) 553, 948, 971
BsaXI ACNNNNNCTCC 2 cut(s) 978, 1008
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 568, 594, 842
Bse1I ACTGG 3 cut(s) 155, 430, 627
Bse3DI GCAATG 1 cut(s) 699
BseAI TCCGGA 2 cut(s) 948, 971
BseBI CCWGG 1 cut(s) 942
BseGI GGATG 4 cut(s) 424, 487, 514, 777
BseLI CCNNNNNNNGG 4 cut(s) 72, 568, 594, 842
BseMI GCAATG 1 cut(s) 699
BseNI ACTGG 3 cut(s) 155, 430, 627
BseRI GAGGAG 2 cut(s) 404, 876
BseXI GCAGC 8 cut(s) 31, 32, 35, 38, 49, 50, 772, 821
BseYI CCCAGC 2 cut(s) 466, 532
BshFI GGCC 2 cut(s) 572, 755
BsiHKAI GWGCWC 1 cut(s) 658
BsiSI CCGG 3 cut(s) 554, 949, 972
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 4 cut(s) 72, 568, 594, 842
BsmAI GTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 727
BsnI GGCC 2 cut(s) 572, 755
Bsp1286I GDGCHC 1 cut(s) 658
Bsp13I TCCGGA 2 cut(s) 948, 971
Bsp143I GATC 1 cut(s) 364
BspACI CCGC 7 cut(s) 36, 42, 316, 319, 585, 611, 756
BspANI GGCC 2 cut(s) 572, 755
BspEI TCCGGA 2 cut(s) 948, 971
BspHI TCATGA 1 cut(s) 1065
BspLI GGNNCC 1 cut(s) 583
BspMAI CTGCAG 2 cut(s) 805, 819
BspMI ACCTGC 1 cut(s) 163
BspPI GGATC 1 cut(s) 359
BsrDI GCAATG 1 cut(s) 699
BsrI ACTGG 3 cut(s) 155, 430, 627
BssMI GATC 1 cut(s) 364
Bst2UI CCWGG 1 cut(s) 942
Bst4CI ACNGT 2 cut(s) 709, 867
Bst6I CTCTTC 2 cut(s) 593, 994
BstAPI GCANNNNNTGC 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 801
BstDEI CTNAG 3 cut(s) 67, 837, 1082
BstENI CCTNNNNNAGG 2 cut(s) 70, 840
BstF5I GGATG 4 cut(s) 424, 487, 514, 777
BstH2I RGCGCY 1 cut(s) 88
BstHHI GCGC 2 cut(s) 87, 149
BstKTI GATC 1 cut(s) 367
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 1 cut(s) 364
BstMWI GCNNNNNNNGC 8 cut(s) 26, 35, 44, 53, 62, 82, 191, 809
BstNI CCWGG 1 cut(s) 942
BstNSI RCATGY 1 cut(s) 202
BstPAI GACNNNNGTC 1 cut(s) 326
BstSCI CCNGG 1 cut(s) 940
BstSFI CTRYAG 3 cut(s) 708, 801, 815
BstV1I GCAGC 8 cut(s) 31, 32, 35, 38, 49, 50, 772, 821
BstXI CCANNNNNNTGG 1 cut(s) 168
BsuRI GGCC 2 cut(s) 572, 755
BtsCI GGATG 4 cut(s) 424, 487, 514, 777
BtsI GCAGTG 1 cut(s) 824
BtsIMutI CAGTG 4 cut(s) 162, 620, 824, 872
BveI ACCTGC 1 cut(s) 163
Cac8I GCNNGC 1 cut(s) 801
CaiI CAGNNNCTG 2 cut(s) 44, 785
CciI TCATGA 1 cut(s) 1065
CfoI GCGC 2 cut(s) 87, 149
Cfr13I GGNCC 3 cut(s) 321, 559, 827
Csp6I GTAC 5 cut(s) 423, 432, 523, 777, 882
CviAII CATG 5 cut(s) 199, 549, 594, 824, 1066
CviQI GTAC 5 cut(s) 423, 432, 523, 777, 882
DdeI CTNAG 3 cut(s) 67, 837, 1082
DpnI GATC 1 cut(s) 366
DpnII GATC 1 cut(s) 364
DraIII CACNNNGTG 1 cut(s) 867
EaeI YGGCCR 2 cut(s) 570, 753
Eam1104I CTCTTC 2 cut(s) 593, 994
EarI CTCTTC 2 cut(s) 593, 994
EciI GGCGGA 2 cut(s) 334, 626
Ecl136II GAGCTC 1 cut(s) 656
Eco24I GRGCYC 1 cut(s) 658
Eco47I GGWCC 3 cut(s) 321, 559, 827
Eco47III AGCGCT 1 cut(s) 86
Eco53kI GAGCTC 1 cut(s) 656
Eco57I CTGAAG 1 cut(s) 1031
EcoICRI GAGCTC 1 cut(s) 656
EcoNI CCTNNNNNAGG 2 cut(s) 70, 840
EcoRI GAATTC 1 cut(s) 875
EcoRII CCWGG 1 cut(s) 940
EcoT38I GRGCYC 1 cut(s) 658
FaeI CATG 5 cut(s) 202, 552, 597, 827, 1069
FaqI GGGAC 1 cut(s) 727
FatI CATG 5 cut(s) 198, 548, 593, 823, 1065
FokI GGATG 4 cut(s) 431, 474, 521, 784
FriOI GRGCYC 1 cut(s) 658
FspBI CTAG 2 cut(s) 767, 920
GlaI GCGC 2 cut(s) 86, 148
GsaI CCCAGC 2 cut(s) 470, 536
GsuI CTGGAG 5 cut(s) 109, 138, 300, 680, 744
HaeII RGCGCY 1 cut(s) 88
HaeIII GGCC 2 cut(s) 572, 755
HapII CCGG 3 cut(s) 554, 949, 972
HhaI GCGC 2 cut(s) 87, 149
Hin1II CATG 5 cut(s) 202, 552, 597, 827, 1069
Hin6I GCGC 2 cut(s) 85, 147
HinP1I GCGC 2 cut(s) 85, 147
HinfI GANTC 3 cut(s) 394, 945, 1069
HpaII CCGG 3 cut(s) 554, 949, 972
HphI GGTGA 2 cut(s) 319, 649
Hpy166II GTNNAC 1 cut(s) 559
Hpy188I TCNGA 2 cut(s) 376, 405
Hpy188III TCNNGA 7 cut(s) 279, 579, 659, 920, 949, 972, 1066
Hpy8I GTNNAC 1 cut(s) 559
Hpy99I CGWCG 2 cut(s) 194, 835
HpyAV CCTTC 3 cut(s) 284, 430, 1065
HpyCH4III ACNGT 2 cut(s) 709, 867
HpyCH4IV ACGT 3 cut(s) 327, 667, 1045
HpyCH4V TGCA 7 cut(s) 47, 344, 512, 692, 803, 809, 817
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 35, 44, 53, 62, 82, 191, 809
HpyF3I CTNAG 3 cut(s) 67, 837, 1082
HpySE526I ACGT 3 cut(s) 327, 667, 1045
Hsp92II CATG 5 cut(s) 202, 552, 597, 827, 1069
HspAI GCGC 2 cut(s) 85, 147
Kpn2I TCCGGA 2 cut(s) 948, 971
Kzo9I GATC 1 cut(s) 364
LmnI GCTCC 1 cut(s) 463
Lsp1109I GCAGC 8 cut(s) 31, 32, 35, 38, 49, 50, 772, 821
LweI GCATC 4 cut(s) 499, 772, 796, 913
MaeI CTAG 2 cut(s) 767, 920
MaeII ACGT 3 cut(s) 327, 667, 1045
MaeIII GTNAC 2 cut(s) 641, 760
MalI GATC 1 cut(s) 366
MboI GATC 1 cut(s) 364
MboII GAAGA 5 cut(s) 370, 610, 884, 1011, 1024
MhlI GDGCHC 1 cut(s) 658
MlsI TGGCCA 1 cut(s) 572
MluCI AATT 7 cut(s) 120, 131, 310, 440, 677, 855, 875
MluNI TGGCCA 1 cut(s) 572
MlyI GAGTC 1 cut(s) 1063
MmeI TCCRAC 1 cut(s) 428
Mox20I TGGCCA 1 cut(s) 572
MroI TCCGGA 2 cut(s) 948, 971
MroXI GAANNNNTTC 1 cut(s) 602
MscI TGGCCA 1 cut(s) 572
MslI CAYNNNNRTG 1 cut(s) 155
Msp20I TGGCCA 1 cut(s) 572
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 3 cut(s) 554, 949, 972
MspR9I CCNGG 1 cut(s) 942
MvaI CCWGG 1 cut(s) 942
MwoI GCNNNNNNNGC 8 cut(s) 26, 35, 44, 53, 62, 82, 191, 809
NdeII GATC 1 cut(s) 364
NlaIII CATG 5 cut(s) 202, 552, 597, 827, 1069
NlaIV GGNNCC 1 cut(s) 583
NmuCI GTSAC 1 cut(s) 641
NspI RCATGY 1 cut(s) 202
OliI CACNNNNGTG 1 cut(s) 155
PagI TCATGA 1 cut(s) 1065
PaqCI CACCTGC 1 cut(s) 163
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 2 cut(s) 394, 945
PflMI CCANNNNNTGG 2 cut(s) 568, 594
PfoI TCCNGGA 1 cut(s) 940
PleI GAGTC 1 cut(s) 1063
PpsI GAGTC 1 cut(s) 1063
PshAI GACNNNNGTC 1 cut(s) 326
PsiI TTATAA 1 cut(s) 542
Psp124BI GAGCTC 1 cut(s) 658
Psp6I CCWGG 1 cut(s) 940
PspFI CCCAGC 2 cut(s) 466, 532
PspGI CCWGG 1 cut(s) 940
PspN4I GGNNCC 1 cut(s) 583
PspPI GGNCC 3 cut(s) 321, 559, 827
PstI CTGCAG 2 cut(s) 805, 819
PstNI CAGNNNCTG 2 cut(s) 44, 785
RsaI GTAC 5 cut(s) 424, 433, 524, 778, 883
RsaNI GTAC 5 cut(s) 423, 432, 523, 777, 882
RseI CAYNNNNRTG 1 cut(s) 155
SacI GAGCTC 1 cut(s) 658
Sau3AI GATC 1 cut(s) 364
Sau96I GGNCC 3 cut(s) 321, 559, 827
ScaI AGTACT 1 cut(s) 883
SchI GAGTC 1 cut(s) 1063
ScrFI CCNGG 1 cut(s) 942
SduI GDGCHC 1 cut(s) 658
SfaNI GCATC 4 cut(s) 499, 772, 796, 913
SfcI CTRYAG 3 cut(s) 708, 801, 815
SinI GGWCC 3 cut(s) 321, 559, 827
SmiMI CAYNNNNRTG 1 cut(s) 155
Sse9I AATT 7 cut(s) 120, 131, 310, 440, 677, 855, 875
SsiI CCGC 7 cut(s) 36, 42, 316, 319, 585, 611, 756
SspMI CTAG 2 cut(s) 767, 920
SstI GAGCTC 1 cut(s) 658
StyD4I CCNGG 1 cut(s) 940
TaaI ACNGT 2 cut(s) 709, 867
TaiI ACGT 3 cut(s) 330, 670, 1048
TaqI TCGA 2 cut(s) 352, 606
TasI AATT 7 cut(s) 120, 131, 310, 440, 677, 855, 875
TatI WGTACW 2 cut(s) 522, 881
TauI GCSGC 3 cut(s) 44, 319, 758
TfiI GAWTC 2 cut(s) 394, 945
TscAI CASTG 4 cut(s) 162, 627, 824, 872
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 8 cut(s) 20, 23, 26, 38, 44, 62, 785, 809
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 1 cut(s) 371
TspGWI ACGGA 1 cut(s) 819
TspRI CASTG 4 cut(s) 162, 627, 824, 872
Van91I CCANNNNNTGG 2 cut(s) 568, 594
VpaK11BI GGWCC 3 cut(s) 321, 559, 827
XagI CCTNNNNNAGG 2 cut(s) 70, 840
XapI RAATTY 4 cut(s) 120, 131, 310, 875
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 1 cut(s) 202
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 2 cut(s) 767, 920
ZrmI AGTACT 1 cut(s) 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.