Prupe.3G087600_v2.0.a1

SNF1-related protein kinase regulatory subunit gamma-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
6490639 .. 6492198
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G087600.2

Sequence Viewer

Length: 1182 bp
ATGCAGCAAACAATGGAGCACAGCACCGCCAAGCACTACTCTGAGGGTGATCAGAGTACTCAACGGCTAAGAGACAAGAAACTAGGGGACTTGATGGTGAACAAGCGCAGGCTCGTGGAGGTGCCGTACACGGCGTCCCTGGCCCACACCATGAACACCTTGGTGGCGAACAAGGTGCTGGCGGTGCCCGTGGCGGCACCGCCGGGCCAGTGGATTGGAGCCGGGGGCTCCATGATCATGGAAGCTGACAAGCACACGGGGACTGTGCGGAAGCACTACATAGGGTTGGCCACCATGCTTGATCTATTGGCTCATATTGCTGGGAATGAAGATCAGTTGATGGATGAAGGAGTTCATGATGGGTTTGATCTTGATCAGAAGATGTCGGTGCCGGTGTCTTCGATCATAGGGCACTGCCTTGAGGGTTTAAGCCTGTGGACTCTAAACCCCAACACAAGTCCCAACTTCAGCATCCTAGACTGTATGGAAGTGTTTAGCAAAGGAATACACCGTGCTTTGGTACCCGTAGACAGCCACATGGACAACGTCTCTGGAGTTGAACTTGTAGAGTCTGCTTCCAGCTACCGAATGCTCACCCAGATGGATGTGTTGAGGTTTGTGAAAGAACATGGCACCTCCGGATCAGAACTCGACAACATCATATCGAGCACGGTATCGGATTTGGGAGCTGTCACGGAGAGAGTTTTCGCCATTACTGACCGCACAAAGGTCATTGATGCCATCAAGTGCATGCGGATAGCTTTGCTAAACGCGGTTCCGATTGTAAGGTCCTCGGATACGGACAATGAAGAAGATCACAAGCAGCTTGTAAATGGCAGAGGAAGGCAAGCTATAGGGACATTTTCGGCAACAGATTTGAGGGGCTGCCACTTCGCAACGCTGCAAACATGGTTGCCGATGAGTGCTCTGGATTACACCGAGACGGTTTTGGCAAACCCTCTATTGGCAGCATTCAATAATGCAGCAGGAAGTCCAACAACAAGGGAGCTGGTGGCATGTCGAGCTGATTCATCCTTAGGTGAAGTGATTGACAAGGTGGTCTCCAAACATGTGCACCGACTTTGGGTTGTGGATCAACAAGGTTTGCTCAAGGGGCTCATTTCCCTCACAGACATAATTAGAGTGTTGAGGCTTGCAATACTGTCTGAACAAAACGCCTAA

Protein Analysis

394

Amino Acids

42.92

Weight (kDa)

5.82

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1058
Acc65I GGTACC 1 cut(s) 520
AccB1I GGYRCC 6 cut(s) 121, 184, 196, 388, 520, 632
AccI GTMKAC 1 cut(s) 528
AccII CGCG 1 cut(s) 773
AccIII TCCGGA 1 cut(s) 638
AciI CCGC 8 cut(s) 27, 182, 194, 200, 268, 721, 754, 773
AclWI GGATC 2 cut(s) 649, 1101
AcoI YGGCCR 1 cut(s) 288
AcuI CTGAAG 1 cut(s) 451
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 3 cut(s) 58, 128, 522
AfiI CCNNNNNNNGG 4 cut(s) 517, 727, 964, 1084
AflIII ACRYGT 1 cut(s) 1069
AgsI TTSAA 2 cut(s) 560, 976
AjnI CCWGG 1 cut(s) 138
AleI CACNNNNGTG 1 cut(s) 161
AluBI AGCT 8 cut(s) 245, 582, 689, 761, 826, 851, 1009, 1025
AluI AGCT 8 cut(s) 245, 582, 689, 761, 826, 851, 1009, 1025
Alw21I GWGCWC 4 cut(s) 21, 671, 928, 1077
Alw26I GTCTC 4 cut(s) 66, 553, 935, 1066
Alw44I GTGCAC 1 cut(s) 1073
AlwI GGATC 2 cut(s) 649, 1101
Aor13HI TCCGGA 1 cut(s) 638
AoxI GGCC 3 cut(s) 141, 205, 288
ApaLI GTGCAC 1 cut(s) 1073
ApeKI GCWGC 6 cut(s) 4, 823, 885, 901, 968, 983
Asp700I GAANNNNTTC 1 cut(s) 351
Asp718I GGTACC 1 cut(s) 520
AspLEI GCGC 1 cut(s) 108
AspS9I GGNCC 3 cut(s) 142, 205, 789
AsuC2I CCSGG 2 cut(s) 204, 223
AsuHPI GGTGA 4 cut(s) 59, 109, 586, 1052
AvaII GGWCC 1 cut(s) 789
AxyI CCTNAGG 1 cut(s) 1036
BaeGI GKGCMC 3 cut(s) 189, 414, 1077
BalI TGGCCA 1 cut(s) 290
BanI GGYRCC 6 cut(s) 121, 184, 196, 388, 520, 632
BanII GRGCYC 2 cut(s) 230, 1119
BauI CACGAG 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 390
Bbv12I GWGCWC 4 cut(s) 21, 671, 928, 1077
BbvI GCAGC 6 cut(s) 16, 835, 872, 888, 980, 995
BccI CCATC 5 cut(s) 88, 334, 353, 595, 749
BceAI ACGGC 3 cut(s) 80, 109, 147
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 1 cut(s) 140
BciVI GTATCC 1 cut(s) 790
BclI TGATCA 3 cut(s) 49, 234, 373
BcnI CCSGG 2 cut(s) 204, 223
BcoDI GTCTC 4 cut(s) 66, 553, 935, 1066
BfaI CTAG 2 cut(s) 83, 476
BfmI CTRYAG 1 cut(s) 852
BfuI GTATCC 1 cut(s) 790
BisI GCNGC 7 cut(s) 5, 195, 824, 886, 902, 969, 984
BlsI GCNGC 7 cut(s) 6, 196, 825, 887, 903, 970, 985
BmcAI AGTACT 1 cut(s) 58
Bme1390I CCNGG 3 cut(s) 140, 204, 223
Bme18I GGWCC 1 cut(s) 789
BmgT120I GGNCC 3 cut(s) 142, 205, 789
BmiI GGNNCC 9 cut(s) 123, 186, 198, 220, 229, 390, 522, 634, 777
BmrFI CCNGG 3 cut(s) 140, 204, 223
BmsI GCATC 2 cut(s) 480, 727
BpiI GAAGAC 1 cut(s) 390
BpmI CTGGAG 1 cut(s) 573
BpuEI CTTGAG 2 cut(s) 440, 1094
BpuMI CCSGG 2 cut(s) 204, 223
BsaBI GATNNNNATC 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 1066
BsaJI CCNNGG 5 cut(s) 138, 159, 189, 222, 792
BsaWI WCCGGW 1 cut(s) 638
BsaXI ACNNNNNCTCC 2 cut(s) 110, 140
Bsc4I CCNNNNNNNGG 4 cut(s) 517, 727, 964, 1084
Bse118I RCCGGY 1 cut(s) 391
Bse1I ACTGG 1 cut(s) 208
Bse21I CCTNAGG 1 cut(s) 1036
Bse8I GATNNNNATC 1 cut(s) 372
BseAI TCCGGA 1 cut(s) 638
BseBI CCWGG 1 cut(s) 140
BseDI CCNNGG 5 cut(s) 138, 159, 189, 222, 792
BseGI GGATG 4 cut(s) 349, 471, 610, 1031
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 4 cut(s) 517, 727, 964, 1084
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 1 cut(s) 208
BseSI GKGCMC 3 cut(s) 189, 414, 1077
BseXI GCAGC 6 cut(s) 16, 835, 872, 888, 980, 995
BseYI CCCAGC 1 cut(s) 320
Bsh1236I CGCG 1 cut(s) 773
BshFI GGCC 3 cut(s) 143, 207, 290
BshNI GGYRCC 6 cut(s) 121, 184, 196, 388, 520, 632
BsiHKAI GWGCWC 4 cut(s) 21, 671, 928, 1077
BsiSI CCGG 4 cut(s) 203, 222, 392, 639
BslFI GGGAC 5 cut(s) 101, 121, 274, 444, 871
BslI CCNNNNNNNGG 4 cut(s) 517, 727, 964, 1084
BsmAI GTCTC 4 cut(s) 66, 553, 935, 1066
BsmBI CGTCTC 2 cut(s) 553, 935
BsmFI GGGAC 5 cut(s) 101, 121, 274, 444, 871
BsmI GAATGC 2 cut(s) 594, 971
BsnI GGCC 3 cut(s) 143, 207, 290
Bso31I GGTCTC 1 cut(s) 1066
Bsp1286I GDGCHC 8 cut(s) 21, 189, 230, 414, 671, 928, 1077, 1119
Bsp13I TCCGGA 1 cut(s) 638
BspACI CCGC 8 cut(s) 27, 182, 194, 200, 268, 721, 754, 773
BspANI GGCC 3 cut(s) 143, 207, 290
BspCNI CTCAG 1 cut(s) 34
BspEI TCCGGA 1 cut(s) 638
BspFNI CGCG 1 cut(s) 773
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 9 cut(s) 123, 186, 198, 220, 229, 390, 522, 634, 777
BspPI GGATC 2 cut(s) 649, 1101
BspT107I GGYRCC 6 cut(s) 121, 184, 196, 388, 520, 632
BspTNI GGTCTC 1 cut(s) 1066
BsrFI RCCGGY 1 cut(s) 391
BsrI ACTGG 1 cut(s) 208
BssAI RCCGGY 1 cut(s) 391
BssECI CCNNGG 5 cut(s) 138, 159, 189, 222, 792
BssNI GRCGYC 1 cut(s) 134
BssSI CACGAG 1 cut(s) 113
BssT1I CCWWGG 1 cut(s) 159
Bst2BI CACGAG 1 cut(s) 113
Bst2UI CCWGG 1 cut(s) 140
Bst4CI ACNGT 6 cut(s) 265, 482, 512, 673, 946, 1164
BstACI GRCGYC 1 cut(s) 134
BstC8I GCNNGC 5 cut(s) 110, 180, 752, 849, 1155
BstDEI CTNAG 3 cut(s) 42, 68, 1036
BstDSI CCRYGG 1 cut(s) 189
BstF5I GGATG 4 cut(s) 349, 471, 610, 1031
BstFNI CGCG 1 cut(s) 773
BstHHI GCGC 1 cut(s) 108
BstMAI GTCTC 4 cut(s) 66, 553, 935, 1066
BstMWI GCNNNNNNNGC 5 cut(s) 140, 184, 317, 1022, 1114
BstNI CCWGG 1 cut(s) 140
BstNSI RCATGY 3 cut(s) 754, 1020, 1073
BstSCI CCNGG 3 cut(s) 138, 202, 221
BstSFI CTRYAG 1 cut(s) 852
BstSLI GKGCMC 3 cut(s) 189, 414, 1077
BstUI CGCG 1 cut(s) 773
BstV1I GCAGC 6 cut(s) 16, 835, 872, 888, 980, 995
BstV2I GAAGAC 1 cut(s) 390
BstXI CCANNNNNNTGG 2 cut(s) 215, 238
Bsu36I CCTNAGG 1 cut(s) 1036
BsuI GTATCC 1 cut(s) 790
BsuRI GGCC 3 cut(s) 143, 207, 290
BtgI CCRYGG 1 cut(s) 189
BtsCI GGATG 4 cut(s) 349, 471, 610, 1031
BtsI GCAGTG 1 cut(s) 412
BtsIMutI CAGTG 2 cut(s) 215, 412
Cac8I GCNNGC 5 cut(s) 110, 180, 752, 849, 1155
CciI TCATGA 1 cut(s) 355
CfoI GCGC 1 cut(s) 108
Cfr10I RCCGGY 1 cut(s) 391
Cfr13I GGNCC 3 cut(s) 142, 205, 789
CseI GACGC 1 cut(s) 123
Csp6I GTAC 3 cut(s) 57, 127, 521
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviQI GTAC 3 cut(s) 57, 127, 521
DdeI CTNAG 3 cut(s) 42, 68, 1036
DrdI GACNNNNNNGTC 1 cut(s) 1058
DseDI GACNNNNNNGTC 1 cut(s) 1058
EaeI YGGCCR 1 cut(s) 288
Eco130I CCWWGG 1 cut(s) 159
Eco24I GRGCYC 2 cut(s) 230, 1119
Eco31I GGTCTC 1 cut(s) 1066
Eco47I GGWCC 1 cut(s) 789
Eco57I CTGAAG 1 cut(s) 451
Eco81I CCTNAGG 1 cut(s) 1036
EcoO109I RGGNCCY 1 cut(s) 789
EcoRII CCWGG 1 cut(s) 138
EcoT14I CCWWGG 1 cut(s) 159
EcoT38I GRGCYC 2 cut(s) 230, 1119
ErhI CCWWGG 1 cut(s) 159
Esp3I CGTCTC 2 cut(s) 553, 935
FaqI GGGAC 5 cut(s) 101, 121, 274, 444, 871
FbaI TGATCA 3 cut(s) 49, 234, 373
FblI GTMKAC 1 cut(s) 528
Fnu4HI GCNGC 7 cut(s) 5, 195, 824, 886, 902, 969, 984
FokI GGATG 4 cut(s) 356, 458, 617, 1018
FriOI GRGCYC 2 cut(s) 230, 1119
Fsp4HI GCNGC 7 cut(s) 5, 195, 824, 886, 902, 969, 984
FspBI CTAG 2 cut(s) 83, 476
GlaI GCGC 1 cut(s) 107
GluI GCNGC 7 cut(s) 5, 195, 824, 886, 902, 969, 984
GsaI CCCAGC 1 cut(s) 324
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 3 cut(s) 143, 207, 290
HapII CCGG 4 cut(s) 203, 222, 392, 639
HgaI GACGC 1 cut(s) 123
HhaI GCGC 1 cut(s) 108
Hin1I GRCGYC 1 cut(s) 134
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HinfI GANTC 3 cut(s) 439, 569, 1028
HpaII CCGG 4 cut(s) 203, 222, 392, 639
HphI GGTGA 4 cut(s) 59, 109, 586, 1052
Hpy166II GTNNAC 5 cut(s) 100, 129, 438, 529, 1075
Hpy188I TCNGA 8 cut(s) 43, 54, 378, 646, 679, 780, 796, 1168
Hpy188III TCNNGA 5 cut(s) 356, 371, 552, 639, 929
Hpy8I GTNNAC 5 cut(s) 100, 129, 438, 529, 1075
HpyAV CCTTC 2 cut(s) 341, 837
HpyCH4III ACNGT 6 cut(s) 265, 482, 512, 673, 946, 1164
HpyCH4IV ACGT 1 cut(s) 546
HpyCH4V TGCA 6 cut(s) 4, 750, 904, 983, 1075, 1157
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 184, 317, 1022, 1114
HpyF3I CTNAG 3 cut(s) 42, 68, 1036
HpySE526I ACGT 1 cut(s) 546
Hsp92I GRCGYC 1 cut(s) 134
HspAI GCGC 1 cut(s) 106
Kpn2I TCCGGA 1 cut(s) 638
KpnI GGTACC 1 cut(s) 524
Ksp22I TGATCA 3 cut(s) 49, 234, 373
LmnI GCTCC 5 cut(s) 16, 218, 233, 686, 1006
Lsp1109I GCAGC 6 cut(s) 16, 835, 872, 888, 980, 995
LweI GCATC 2 cut(s) 480, 727
MaeI CTAG 2 cut(s) 83, 476
MaeII ACGT 1 cut(s) 546
MaeIII GTNAC 1 cut(s) 691
MboII GAAGA 5 cut(s) 341, 390, 391, 821, 824
MhlI GDGCHC 8 cut(s) 21, 189, 230, 414, 671, 928, 1077, 1119
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 1 cut(s) 1137
MluNI TGGCCA 1 cut(s) 290
MlyI GAGTC 2 cut(s) 433, 578
MmeI TCCRAC 1 cut(s) 1019
Mox20I TGGCCA 1 cut(s) 290
MroI TCCGGA 1 cut(s) 638
MroXI GAANNNNTTC 1 cut(s) 351
MscI TGGCCA 1 cut(s) 290
MseI TTAA 1 cut(s) 428
MslI CAYNNNNRTG 3 cut(s) 161, 236, 599
Msp20I TGGCCA 1 cut(s) 290
MspI CCGG 4 cut(s) 203, 222, 392, 639
MspR9I CCNGG 3 cut(s) 140, 204, 223
Mva1269I GAATGC 2 cut(s) 594, 971
MvaI CCWGG 1 cut(s) 140
MvnI CGCG 1 cut(s) 773
MwoI GCNNNNNNNGC 5 cut(s) 140, 184, 317, 1022, 1114
NciI CCSGG 2 cut(s) 204, 223
NlaIV GGNNCC 9 cut(s) 123, 186, 198, 220, 229, 390, 522, 634, 777
NmuCI GTSAC 1 cut(s) 691
NspI RCATGY 3 cut(s) 754, 1020, 1073
OliI CACNNNNGTG 1 cut(s) 161
PaeI GCATGC 1 cut(s) 754
PagI TCATGA 1 cut(s) 355
PciI ACATGT 1 cut(s) 1069
PctI GAATGC 2 cut(s) 594, 971
PdmI GAANNNNTTC 1 cut(s) 351
PfeI GAWTC 1 cut(s) 1028
PflFI GACNNNGTC 1 cut(s) 545
PkrI GCNGC 7 cut(s) 6, 196, 825, 887, 903, 970, 985
PleI GAGTC 2 cut(s) 433, 577
PpsI GAGTC 2 cut(s) 433, 577
PpuMI RGGWCCY 1 cut(s) 789
PscI ACATGT 1 cut(s) 1069
Psp5II RGGWCCY 1 cut(s) 789
Psp6I CCWGG 1 cut(s) 138
PspFI CCCAGC 1 cut(s) 320
PspGI CCWGG 1 cut(s) 138
PspN4I GGNNCC 9 cut(s) 123, 186, 198, 220, 229, 390, 522, 634, 777
PspPI GGNCC 3 cut(s) 142, 205, 789
PspPPI RGGWCCY 1 cut(s) 789
PsyI GACNNNGTC 1 cut(s) 545
RsaI GTAC 3 cut(s) 58, 128, 522
RsaNI GTAC 3 cut(s) 57, 127, 521
RseI CAYNNNNRTG 3 cut(s) 161, 236, 599
SaqAI TTAA 1 cut(s) 428
SatI GCNGC 7 cut(s) 5, 195, 824, 886, 902, 969, 984
Sau96I GGNCC 3 cut(s) 142, 205, 789
ScaI AGTACT 1 cut(s) 58
SchI GAGTC 2 cut(s) 433, 578
ScrFI CCNGG 3 cut(s) 140, 204, 223
SduI GDGCHC 8 cut(s) 21, 189, 230, 414, 671, 928, 1077, 1119
SfaNI GCATC 2 cut(s) 480, 727
SfcI CTRYAG 1 cut(s) 852
SinI GGWCC 1 cut(s) 789
SmiMI CAYNNNNRTG 3 cut(s) 161, 236, 599
SmlI CTYRAG 2 cut(s) 419, 1109
SmoI CTYRAG 2 cut(s) 419, 1109
SphI GCATGC 1 cut(s) 754
Sse9I AATT 1 cut(s) 1137
SsiI CCGC 8 cut(s) 27, 182, 194, 200, 268, 721, 754, 773
SspMI CTAG 2 cut(s) 83, 476
StyD4I CCNGG 3 cut(s) 138, 202, 221
StyI CCWWGG 1 cut(s) 159
TaaI ACNGT 6 cut(s) 265, 482, 512, 673, 946, 1164
TaiI ACGT 1 cut(s) 549
TaqI TCGA 4 cut(s) 401, 651, 665, 1021
TasI AATT 1 cut(s) 1137
TatI WGTACW 1 cut(s) 56
TauI GCSGC 1 cut(s) 197
TfiI GAWTC 1 cut(s) 1028
Tru1I TTAA 1 cut(s) 428
Tru9I TTAA 1 cut(s) 428
TscAI CASTG 2 cut(s) 215, 419
TseFI GTSAC 1 cut(s) 691
TseI GCWGC 6 cut(s) 4, 823, 885, 901, 968, 983
Tsp45I GTSAC 1 cut(s) 691
TspDTI ATGAA 6 cut(s) 167, 342, 344, 360, 822, 1020
TspGWI ACGGA 2 cut(s) 710, 815
TspRI CASTG 2 cut(s) 215, 419
Tth111I GACNNNGTC 1 cut(s) 545
VneI GTGCAC 1 cut(s) 1073
VpaK11BI GGWCC 1 cut(s) 789
XceI RCATGY 3 cut(s) 754, 1020, 1073
XcmI CCANNNNNNNNNTGG 1 cut(s) 157
XmiI GTMKAC 1 cut(s) 528
XmnI GAANNNNTTC 1 cut(s) 351
XspI CTAG 2 cut(s) 83, 476
ZrmI AGTACT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.