pycom17g21720

SNF1-related protein kinase regulatory subunit gamma-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
20166909 .. 20168761
1853 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g21720.2

Sequence Viewer

Length: 1281 bp
ATGTCCGAAGCACTCATCTTACGGATAAATATCAATAACACCACCTCCTTATCTTCCACTTTCCTTGCACAAAATTCAGTACAAAAAATAAACAAAATGCAGCAAACAAAGGAGCAGTACAACACCGGCACCGCCAAGCAGCCTTCTCACGAGGCTGATCAGAGTAGTACTCAAGGGCTAAGTGACAAGAAGGTCGGGGACCTGATGGTTAACAAGCGGAGGCTCGTGGAGGTGCCGTACACGGCGACTCTTGCCCATACCATGAACGCTTTGGTGGCGAACAAGGTGCTGGCCGTGCCCGTGGCAGCACCGCCAGGCCAGTGGATTGGAGCCGGTGGTTCTATGATCATGGAAGCTGACAAGCAGACCGGGACTGTGCGGAAGCACTATATAGGATTGGCCACCATGCTTGATATCTTGGCTCATATTGCAGGGACTGAAGATCAGCTGATGGATGAAGAAGTTAATGATGGGTTTGATCTTGATCAGAAGATGTCAGTTCCGGTGTCTAAGATCATAGGGCACTGCCTTGAGGGTTTAAGCTTGTGGACACTAAACCCCAACACAAGCATCATAGACTGTATGGAAATGTTTAGCAAAGGAATACACCGTGCTTTGGTACCCGTAGACAGCCACATGGACAACATCGCTGGAGTTGAACTTGTGGAATCCGCTTCCAGCTACCGGATGCTCACCCAAATGGATGTGTTGAAGTTCCTCAAGGAACATGCCAGCTCCGGATCCGAACTCGATGGCATCCTATCACGGACGGTGTCTGATTTGGGAGTGGTAACTGAACGAGTTTTCGCTATCACTGACCGCACAGTGGTTATAGATGCCATCAAGTGCATGCGGATAGCTTTGCTGAATGCTGTTCCGATTGTCAGATCCTCAGACGCCGACAATGAAGAAGATCACAAGCAGCTTGTAAATGGCATAGGTAGGGAGGTTATAGGAACATTTTCGGCAACGGATTTGAGGGGTTGCCACTTTGCGACGCTGAAAACATGGCTGCCAATGAGTGCCCTGGACTATACGGAGACTGTCTTTGCAAACCCTCTATTGGCATCAATAGCATCGAACACAGCGGGTCCAACGTCGAGGGAACTGGTCGTATGCAAATCTGATACGCCCATAGGTCAAGTGATTGACAAGGTGGTCACCAAACATGTGCACCGAGTTTGGGTTGTGGATCAACAAGGCTTGCTCAAGGGCCTCGTTTCTCTCACGGACATAATCCGAGCGATGAGGTTTGCAATAGTTGCTGAACCAAACCCCTGA

Protein Analysis

427

Amino Acids

46.36

Weight (kDa)

5.75

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 191, 1157
Acc65I GGTACC 1 cut(s) 619
AccB1I GGYRCC 3 cut(s) 128, 232, 619
AccI GTMKAC 1 cut(s) 627
AccIII TCCGGA 1 cut(s) 737
AciI CCGC 8 cut(s) 132, 217, 311, 379, 672, 820, 853, 1088
AclWI GGATC 4 cut(s) 735, 748, 882, 1200
AcoI YGGCCR 2 cut(s) 291, 399
AcsI RAATTY 1 cut(s) 73
AcuI CTGAAG 1 cut(s) 459
AcyI GRCGYC 1 cut(s) 897
AfaI GTAC 5 cut(s) 81, 119, 169, 239, 621
AfiI CCNNNNNNNGG 5 cut(s) 616, 684, 826, 1063, 1183
AflIII ACRYGT 1 cut(s) 1168
AgsI TTSAA 2 cut(s) 659, 712
AjnI CCWGG 2 cut(s) 313, 1026
AluBI AGCT 7 cut(s) 356, 448, 543, 681, 735, 860, 925
AluI AGCT 7 cut(s) 356, 448, 543, 681, 735, 860, 925
Alw21I GWGCWC 1 cut(s) 1176
Alw26I GTCTC 1 cut(s) 1034
Alw44I GTGCAC 1 cut(s) 1172
AlwI GGATC 4 cut(s) 735, 748, 882, 1200
AlwNI CAGNNNCTG 1 cut(s) 437
Aor13HI TCCGGA 1 cut(s) 737
AoxI GGCC 4 cut(s) 291, 316, 399, 1213
ApaLI GTGCAC 1 cut(s) 1172
ApeKI GCWGC 5 cut(s) 100, 139, 305, 922, 1012
ApoI RAATTY 1 cut(s) 73
Asp700I GAANNNNTTC 1 cut(s) 961
Asp718I GGTACC 1 cut(s) 619
AspS9I GGNCC 3 cut(s) 199, 1091, 1213
AsuC2I CCSGG 1 cut(s) 370
AsuHPI GGTGA 2 cut(s) 685, 1153
AvaII GGWCC 2 cut(s) 199, 1091
BaeGI GKGCMC 4 cut(s) 300, 525, 1027, 1176
BalI TGGCCA 1 cut(s) 401
BamHI GGATCC 1 cut(s) 740
BanI GGYRCC 3 cut(s) 128, 232, 619
BauI CACGAG 2 cut(s) 149, 224
Bbv12I GWGCWC 1 cut(s) 1176
BbvI GCAGC 5 cut(s) 112, 151, 317, 934, 999
BccI CCATC 5 cut(s) 199, 445, 464, 746, 848
BceAI ACGGC 3 cut(s) 220, 258, 278
BcgI CGANNNNNNTGC 2 cut(s) 268, 302
BciT130I CCWGG 2 cut(s) 315, 1028
BclI TGATCA 3 cut(s) 157, 345, 484
BcnI CCSGG 1 cut(s) 370
BcoDI GTCTC 1 cut(s) 1034
BisI GCNGC 5 cut(s) 101, 140, 306, 923, 1013
BlsI GCNGC 5 cut(s) 102, 141, 307, 924, 1014
BmcAI AGTACT 1 cut(s) 169
Bme1390I CCNGG 3 cut(s) 315, 370, 1028
Bme18I GGWCC 2 cut(s) 199, 1091
BmgT120I GGNCC 3 cut(s) 199, 1091, 1213
BmiI GGNNCC 7 cut(s) 130, 200, 234, 331, 621, 742, 1092
BmrFI CCNGG 3 cut(s) 315, 370, 1028
BmsI GCATC 6 cut(s) 579, 678, 765, 826, 1076, 1085
BplI GAGNNNNNCTC 2 cut(s) 154, 186
BpmI CTGGAG 1 cut(s) 672
BpuEI CTTGAG 4 cut(s) 156, 551, 704, 1193
BpuMI CCSGG 1 cut(s) 370
BsaBI GATNNNNATC 2 cut(s) 29, 483
BsaHI GRCGYC 1 cut(s) 897
BsaJI CCNNGG 2 cut(s) 300, 1026
BsaWI WCCGGW 3 cut(s) 502, 684, 737
BsaXI ACNNNNNCTCC 4 cut(s) 29, 59, 221, 251
Bsc4I CCNNNNNNNGG 5 cut(s) 616, 684, 826, 1063, 1183
Bse118I RCCGGY 2 cut(s) 125, 332
Bse1I ACTGG 2 cut(s) 319, 1113
Bse8I GATNNNNATC 2 cut(s) 29, 483
BseAI TCCGGA 1 cut(s) 737
BseBI CCWGG 2 cut(s) 315, 1028
BseDI CCNNGG 2 cut(s) 300, 1026
BseGI GGATG 4 cut(s) 460, 693, 709, 756
BseJI GATNNNNATC 2 cut(s) 29, 483
BseLI CCNNNNNNNGG 5 cut(s) 616, 684, 826, 1063, 1183
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 2 cut(s) 319, 1113
BseSI GKGCMC 4 cut(s) 300, 525, 1027, 1176
BseXI GCAGC 5 cut(s) 112, 151, 317, 934, 999
BshFI GGCC 4 cut(s) 293, 318, 401, 1215
BshNI GGYRCC 3 cut(s) 128, 232, 619
BsiHKAI GWGCWC 1 cut(s) 1176
BsiSI CCGG 6 cut(s) 126, 333, 369, 503, 685, 738
BslFI GGGAC 3 cut(s) 212, 385, 448
BslI CCNNNNNNNGG 5 cut(s) 616, 684, 826, 1063, 1183
BsmAI GTCTC 1 cut(s) 1034
BsmFI GGGAC 3 cut(s) 212, 385, 448
BsmI GAATGC 1 cut(s) 874
BsnI GGCC 4 cut(s) 293, 318, 401, 1215
Bsp1286I GDGCHC 4 cut(s) 300, 525, 1027, 1176
Bsp13I TCCGGA 1 cut(s) 737
BspACI CCGC 8 cut(s) 132, 217, 311, 379, 672, 820, 853, 1088
BspANI GGCC 4 cut(s) 293, 318, 401, 1215
BspCNI CTCAG 1 cut(s) 905
BspEI TCCGGA 1 cut(s) 737
BspLI GGNNCC 7 cut(s) 130, 200, 234, 331, 621, 742, 1092
BspPI GGATC 4 cut(s) 735, 748, 882, 1200
BspT107I GGYRCC 3 cut(s) 128, 232, 619
BsrFI RCCGGY 2 cut(s) 125, 332
BsrI ACTGG 2 cut(s) 319, 1113
BssAI RCCGGY 2 cut(s) 125, 332
BssECI CCNNGG 2 cut(s) 300, 1026
BssNI GRCGYC 1 cut(s) 897
BssSI CACGAG 2 cut(s) 149, 224
Bst2BI CACGAG 2 cut(s) 149, 224
Bst2UI CCWGG 2 cut(s) 315, 1028
Bst4CI ACNGT 6 cut(s) 376, 581, 611, 772, 826, 1045
BstACI GRCGYC 1 cut(s) 897
BstAPI GCANNNNNTGC 1 cut(s) 1262
BstC8I GCNNGC 4 cut(s) 291, 733, 851, 1205
BstDEI CTNAG 3 cut(s) 179, 510, 892
BstDSI CCRYGG 1 cut(s) 300
BstEII GGTNACC 1 cut(s) 1159
BstF5I GGATG 4 cut(s) 460, 693, 709, 756
BstMAI GTCTC 1 cut(s) 1034
BstMWI GCNNNNNNNGC 6 cut(s) 251, 275, 295, 428, 1073, 1262
BstNI CCWGG 2 cut(s) 315, 1028
BstNSI RCATGY 3 cut(s) 731, 853, 1172
BstPI GGTNACC 1 cut(s) 1159
BstSCI CCNGG 3 cut(s) 313, 368, 1026
BstSLI GKGCMC 4 cut(s) 300, 525, 1027, 1176
BstV1I GCAGC 5 cut(s) 112, 151, 317, 934, 999
BstX2I RGATCY 2 cut(s) 740, 887
BstXI CCANNNNNNTGG 2 cut(s) 321, 326
BstYI RGATCY 2 cut(s) 740, 887
BsuRI GGCC 4 cut(s) 293, 318, 401, 1215
BtgI CCRYGG 1 cut(s) 300
BtgZI GCGATG 2 cut(s) 631, 1259
BtsCI GGATG 4 cut(s) 460, 693, 709, 756
BtsI GCAGTG 1 cut(s) 523
BtsIMutI CAGTG 4 cut(s) 326, 523, 813, 831
Cac8I GCNNGC 4 cut(s) 291, 733, 851, 1205
CaiI CAGNNNCTG 1 cut(s) 437
Cfr10I RCCGGY 2 cut(s) 125, 332
Cfr13I GGNCC 3 cut(s) 199, 1091, 1213
CseI GACGC 2 cut(s) 905, 1006
Csp6I GTAC 5 cut(s) 80, 118, 168, 238, 620
CspCI CAANNNNNGTGG 4 cut(s) 46, 81, 391, 426
CviAII CATG 8 cut(s) 262, 349, 406, 637, 728, 850, 1008, 1169
CviQI GTAC 5 cut(s) 80, 118, 168, 238, 620
DdeI CTNAG 3 cut(s) 179, 510, 892
DrdI GACNNNNNNGTC 2 cut(s) 191, 1157
DseDI GACNNNNNNGTC 2 cut(s) 191, 1157
EaeI YGGCCR 2 cut(s) 291, 399
Eco32I GATATC 1 cut(s) 415
Eco47I GGWCC 2 cut(s) 199, 1091
Eco57I CTGAAG 1 cut(s) 459
Eco91I GGTNACC 1 cut(s) 1159
EcoO109I RGGNCCY 2 cut(s) 199, 1213
EcoO65I GGTNACC 1 cut(s) 1159
EcoRII CCWGG 2 cut(s) 313, 1026
EcoRV GATATC 1 cut(s) 415
FaeI CATG 8 cut(s) 265, 352, 409, 640, 731, 853, 1011, 1172
FaqI GGGAC 3 cut(s) 212, 385, 448
FatI CATG 8 cut(s) 261, 348, 405, 636, 727, 849, 1007, 1168
FauI CCCGC 1 cut(s) 1081
FbaI TGATCA 3 cut(s) 157, 345, 484
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 5 cut(s) 101, 140, 306, 923, 1013
FokI GGATG 4 cut(s) 467, 700, 716, 743
Fsp4HI GCNGC 5 cut(s) 101, 140, 306, 923, 1013
GluI GCNGC 5 cut(s) 101, 140, 306, 923, 1013
GsuI CTGGAG 1 cut(s) 672
HaeIII GGCC 4 cut(s) 293, 318, 401, 1215
HapII CCGG 6 cut(s) 126, 333, 369, 503, 685, 738
HgaI GACGC 2 cut(s) 905, 1006
Hin1I GRCGYC 1 cut(s) 897
Hin1II CATG 8 cut(s) 265, 352, 409, 640, 731, 853, 1011, 1172
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HindIII AAGCTT 1 cut(s) 541
HinfI GANTC 2 cut(s) 247, 668
HpaI GTTAAC 1 cut(s) 211
HpaII CCGG 6 cut(s) 126, 333, 369, 503, 685, 738
HphI GGTGA 2 cut(s) 685, 1153
Hpy166II GTNNAC 5 cut(s) 211, 240, 549, 628, 1174
Hpy188III TCNNGA 3 cut(s) 149, 482, 738
Hpy8I GTNNAC 5 cut(s) 211, 240, 549, 628, 1174
Hpy99I CGWCG 2 cut(s) 1000, 1102
HpyAV CCTTC 2 cut(s) 153, 184
HpyCH4III ACNGT 6 cut(s) 376, 581, 611, 772, 826, 1045
HpyCH4IV ACGT 1 cut(s) 1097
HpyCH4V TGCA 8 cut(s) 68, 100, 431, 849, 1052, 1119, 1174, 1256
HpyF10VI GCNNNNNNNGC 6 cut(s) 251, 275, 295, 428, 1073, 1262
HpyF3I CTNAG 3 cut(s) 179, 510, 892
HpySE526I ACGT 1 cut(s) 1097
Hsp92I GRCGYC 1 cut(s) 897
Hsp92II CATG 8 cut(s) 265, 352, 409, 640, 731, 853, 1011, 1172
Kpn2I TCCGGA 1 cut(s) 737
KpnI GGTACC 1 cut(s) 623
Ksp22I TGATCA 3 cut(s) 157, 345, 484
KspAI GTTAAC 1 cut(s) 211
LmnI GCTCC 3 cut(s) 112, 329, 740
Lsp1109I GCAGC 5 cut(s) 112, 151, 317, 934, 999
LweI GCATC 6 cut(s) 579, 678, 765, 826, 1076, 1085
MaeII ACGT 1 cut(s) 1097
MaeIII GTNAC 3 cut(s) 182, 790, 1159
MboII GAAGA 6 cut(s) 45, 452, 470, 502, 920, 923
MflI RGATCY 2 cut(s) 740, 887
MhlI GDGCHC 4 cut(s) 300, 525, 1027, 1176
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 1 cut(s) 73
MluNI TGGCCA 1 cut(s) 401
MlyI GAGTC 1 cut(s) 241
MmeI TCCRAC 1 cut(s) 1118
Mox20I TGGCCA 1 cut(s) 401
MroI TCCGGA 1 cut(s) 737
MroXI GAANNNNTTC 1 cut(s) 961
MscI TGGCCA 1 cut(s) 401
MseI TTAA 3 cut(s) 210, 465, 539
MslI CAYNNNNRTG 1 cut(s) 698
Msp20I TGGCCA 1 cut(s) 401
MspA1I CMGCKG 2 cut(s) 448, 1088
MspI CCGG 6 cut(s) 126, 333, 369, 503, 685, 738
MspR9I CCNGG 3 cut(s) 315, 370, 1028
Mva1269I GAATGC 1 cut(s) 874
MvaI CCWGG 2 cut(s) 315, 1028
MwoI GCNNNNNNNGC 6 cut(s) 251, 275, 295, 428, 1073, 1262
NciI CCSGG 1 cut(s) 370
NlaIII CATG 8 cut(s) 265, 352, 409, 640, 731, 853, 1011, 1172
NlaIV GGNNCC 7 cut(s) 130, 200, 234, 331, 621, 742, 1092
NmuCI GTSAC 2 cut(s) 182, 1159
NspI RCATGY 3 cut(s) 731, 853, 1172
PaeI GCATGC 1 cut(s) 853
PciI ACATGT 1 cut(s) 1168
PctI GAATGC 1 cut(s) 874
PdmI GAANNNNTTC 1 cut(s) 961
PfeI GAWTC 1 cut(s) 668
PflFI GACNNNGTC 1 cut(s) 772
PkrI GCNGC 5 cut(s) 102, 141, 307, 924, 1014
PleI GAGTC 1 cut(s) 241
PpsI GAGTC 1 cut(s) 241
PpuMI RGGWCCY 1 cut(s) 199
PscI ACATGT 1 cut(s) 1168
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 2 cut(s) 313, 1026
PspEI GGTNACC 1 cut(s) 1159
PspGI CCWGG 2 cut(s) 313, 1026
PspN4I GGNNCC 7 cut(s) 130, 200, 234, 331, 621, 742, 1092
PspPI GGNCC 3 cut(s) 199, 1091, 1213
PspPPI RGGWCCY 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 437
PsuI RGATCY 2 cut(s) 740, 887
PsyI GACNNNGTC 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 448
RsaI GTAC 5 cut(s) 81, 119, 169, 239, 621
RsaNI GTAC 5 cut(s) 80, 118, 168, 238, 620
RseI CAYNNNNRTG 1 cut(s) 698
SaqAI TTAA 3 cut(s) 210, 465, 539
SatI GCNGC 5 cut(s) 101, 140, 306, 923, 1013
Sau96I GGNCC 3 cut(s) 199, 1091, 1213
ScaI AGTACT 1 cut(s) 169
SchI GAGTC 1 cut(s) 241
ScrFI CCNGG 3 cut(s) 315, 370, 1028
SduI GDGCHC 4 cut(s) 300, 525, 1027, 1176
SfaNI GCATC 6 cut(s) 579, 678, 765, 826, 1076, 1085
SinI GGWCC 2 cut(s) 199, 1091
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 4 cut(s) 171, 530, 719, 1208
SmoI CTYRAG 4 cut(s) 171, 530, 719, 1208
SphI GCATGC 1 cut(s) 853
Sse9I AATT 1 cut(s) 73
SsiI CCGC 8 cut(s) 132, 217, 311, 379, 672, 820, 853, 1088
StyD4I CCNGG 3 cut(s) 313, 368, 1026
TaaI ACNGT 6 cut(s) 376, 581, 611, 772, 826, 1045
TaiI ACGT 1 cut(s) 1100
TaqI TCGA 3 cut(s) 750, 1079, 1100
TasI AATT 1 cut(s) 73
TatI WGTACW 3 cut(s) 79, 117, 167
TfiI GAWTC 1 cut(s) 668
Tru1I TTAA 3 cut(s) 210, 465, 539
Tru9I TTAA 3 cut(s) 210, 465, 539
TscAI CASTG 4 cut(s) 326, 530, 820, 831
TseFI GTSAC 2 cut(s) 182, 1159
TseI GCWGC 5 cut(s) 100, 139, 305, 922, 1012
Tsp45I GTSAC 2 cut(s) 182, 1159
TspDTI ATGAA 3 cut(s) 278, 471, 921
TspGWI ACGGA 5 cut(s) 37, 781, 986, 1052, 1244
TspRI CASTG 4 cut(s) 326, 530, 820, 831
Tth111I GACNNNGTC 1 cut(s) 772
VneI GTGCAC 1 cut(s) 1172
VpaK11BI GGWCC 2 cut(s) 199, 1091
XapI RAATTY 1 cut(s) 73
XceI RCATGY 3 cut(s) 731, 853, 1172
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
XmiI GTMKAC 1 cut(s) 627
XmnI GAANNNNTTC 1 cut(s) 961
ZrmI AGTACT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.