Rmu_sc0002732.1_g000009

SNF1-related protein kinase regulatory subunit gamma-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002732.1
Physical Location & Seq
Forward (+)
23780 .. 26641
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002732.1_g000009.1.cds

Sequence Viewer

Length: 1404 bp
atgtgtagagggaaggctcaaggcaggcatagggcaagggccggtccgatttttccgacagccggttcaggggttttccggcgggttccggtggttccgccaccggttctgggctccttgagtcgagggcttcgatatgtggggcggtggttgcaggattttgaaggttacgaaattagggttttcagggttagggcttccctagatactttcattggcaaagtcaaactcagagagtaccaaaacatgcagcaaatgatggagcaaagcaatactcagttctctgagactactcagaggctgagagacaagaaggttgtggacatgatggcaaacaagaggaggctggtggaggttccgtatacggcgactctggctcacaccatgaacgcattggtggccaaccaggtgctggcggtgcccgtggcggcccctccgggtcattggatcggagcaggcggctcgatgattgtggaagctgacaagcaaaccgggtctgtgcggaagcactatatagggatggcaaccatgcttgatatcctggctcatattgcaggaaatgatggagatcaattgatggttgatgagggaggcgttcatgatggggggtttgatctagagcataagatgtctgtccccgtttcttcgattattgggcattgcctcgagggtttaagcttgtggactctaaaccccaacacaagcgtcatagactgtatggaagtgtttagcaaaggaatacaccgtgctttggtaccactagacagccacatggacaacgtctctggagttgaacttgtggagtctgcttccagctatcgaatgctaacacaaatggatgtcctaaggttcctgaaggaacatgctgaagctagcactgaactgaacggcattctgtcacacactgtttctgaattgggggctgtgacagagagggtttatgcaattactgatcgcaccaaggttatagatgccatcaagtgcatgcgaattgctttgctgaacgctgttccgatagttaggtcctcccctgccaacgaagatgaccacaagcagcttgtaaatggaaggggtaggcaggtattgggcacattttctgcaacagatataaggggatgccacctgtcaacactgaaaacatggttaccaataagcgcactggagtacacagagacgatttcagccagccctttattatcaaccaatcctaatgcgggcgagagtgcaagagaacttgtggcgtgtcgagttgactcgacagtggctgaagtaatcgacaaggtcgtcactaaacacgtgcacagaatttgggtggtggatcaacaaggtttgctcatggggcttatttcactcactgatataatccgagtgttgaggcacgccttgatgtctgaaacctcttga

Protein Analysis

467

Amino Acids

51.33

Weight (kDa)

7.75

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1283
AbsI CCTCGAGG 1 cut(s) 665
Acc36I ACCTGC 1 cut(s) 1069
Acc65I GGTACC 1 cut(s) 754
AccB1I GGYRCC 2 cut(s) 418, 754
AccB7I CCANNNNNTGG 1 cut(s) 412
AccI GTMKAC 1 cut(s) 362
AciI CCGC 8 cut(s) 82, 98, 145, 416, 428, 459, 502, 1214
AclWI GGATC 2 cut(s) 455, 1326
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 1 cut(s) 1305
AcuI CTGAAG 3 cut(s) 875, 888, 1287
AcvI CACGTG 1 cut(s) 1297
AfaI GTAC 3 cut(s) 239, 756, 1166
AfiI CCNNNNNNNGG 6 cut(s) 62, 69, 110, 412, 751, 1214
AflIII ACRYGT 1 cut(s) 1294
AgeI ACCGGT 1 cut(s) 103
AgsI TTSAA 2 cut(s) 164, 794
AjnI CCWGG 2 cut(s) 405, 540
AluBI AGCT 5 cut(s) 479, 678, 816, 872, 1057
AluI AGCT 5 cut(s) 479, 678, 816, 872, 1057
Alw21I GWGCWC 1 cut(s) 1302
Alw26I GTCTC 4 cut(s) 281, 300, 787, 1166
Alw44I GTGCAC 1 cut(s) 1298
AlwI GGATC 2 cut(s) 455, 1326
AlwNI CAGNNNCTG 3 cut(s) 301, 412, 1265
Ama87I CYCGRG 1 cut(s) 665
AoxI GGCC 3 cut(s) 39, 399, 429
ApaLI GTGCAC 1 cut(s) 1298
ApeKI GCWGC 2 cut(s) 250, 1054
ApoI RAATTY 1 cut(s) 1305
AsiGI ACCGGT 1 cut(s) 103
Asp718I GGTACC 1 cut(s) 754
AspLEI GCGC 1 cut(s) 1157
AspS9I GGNCC 4 cut(s) 39, 44, 430, 1023
AsuC2I CCSGG 2 cut(s) 438, 493
AsuNHI GCTAGC 1 cut(s) 872
AvaI CYCGRG 1 cut(s) 665
AvaII GGWCC 2 cut(s) 44, 1023
AxyI CCTNAGG 1 cut(s) 845
BaeGI GKGCMC 3 cut(s) 423, 1091, 1302
BalI TGGCCA 1 cut(s) 401
BanI GGYRCC 2 cut(s) 418, 754
BanII GRGCYC 1 cut(s) 116
BbrPI CACGTG 1 cut(s) 1297
Bbv12I GWGCWC 1 cut(s) 1302
BbvI GCAGC 2 cut(s) 262, 1066
BccI CCATC 7 cut(s) 253, 322, 514, 557, 571, 596, 983
BceAI ACGGC 2 cut(s) 381, 904
BcgI CGANNNNNNTGC 2 cut(s) 444, 478
BciT130I CCWGG 2 cut(s) 407, 542
BcnI CCSGG 2 cut(s) 438, 493
BcoDI GTCTC 4 cut(s) 281, 300, 787, 1166
BfaI CTAG 4 cut(s) 203, 617, 761, 873
BfuAI ACCTGC 1 cut(s) 1069
BisI GCNGC 4 cut(s) 251, 429, 460, 1055
BlsI GCNGC 4 cut(s) 252, 430, 461, 1056
Bme1390I CCNGG 4 cut(s) 407, 438, 493, 542
Bme18I GGWCC 2 cut(s) 44, 1023
BmeT110I CYCGRG 1 cut(s) 665
BmgT120I GGNCC 4 cut(s) 39, 44, 430, 1023
BmiI GGNNCC 8 cut(s) 87, 96, 115, 357, 420, 432, 756, 851
BmrFI CCNGG 4 cut(s) 407, 438, 493, 542
BmsI GCATC 2 cut(s) 961, 1106
BmtI GCTAGC 1 cut(s) 876
BpmI CTGGAG 2 cut(s) 807, 1181
BpuEI CTTGAG 1 cut(s) 139
BpuMI CCSGG 2 cut(s) 438, 493
BsaAI YACGTR 1 cut(s) 1297
BsaBI GATNNNNATC 1 cut(s) 567
BsaJI CCNNGG 2 cut(s) 423, 960
BsaWI WCCGGW 2 cut(s) 88, 103
BsaXI ACNNNNNCTCC 2 cut(s) 344, 374
Bsc4I CCNNNNNNNGG 6 cut(s) 62, 69, 110, 412, 751, 1214
Bse118I RCCGGY 3 cut(s) 41, 62, 103
Bse1I ACTGG 1 cut(s) 1164
Bse21I CCTNAGG 1 cut(s) 845
Bse3DI GCAATG 1 cut(s) 658
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 2 cut(s) 407, 542
BseDI CCNNGG 2 cut(s) 423, 960
BseGI GGATG 3 cut(s) 525, 844, 1121
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 6 cut(s) 62, 69, 110, 412, 751, 1214
BseMI GCAATG 1 cut(s) 658
BseMII CTCAG 5 cut(s) 244, 276, 290, 293, 308
BseNI ACTGG 1 cut(s) 1164
BseRI GAGGAG 1 cut(s) 355
BseSI GKGCMC 3 cut(s) 423, 1091, 1302
BseXI GCAGC 2 cut(s) 262, 1066
BshFI GGCC 3 cut(s) 41, 401, 431
BshNI GGYRCC 2 cut(s) 418, 754
BshTI ACCGGT 1 cut(s) 103
BsiHKAI GWGCWC 1 cut(s) 1302
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 7 cut(s) 42, 63, 79, 89, 104, 437, 492
BslFI GGGAC 1 cut(s) 620
BslI CCNNNNNNNGG 6 cut(s) 62, 69, 110, 412, 751, 1214
BsmAI GTCTC 4 cut(s) 281, 300, 787, 1166
BsmBI CGTCTC 2 cut(s) 787, 1166
BsmFI GGGAC 1 cut(s) 620
BsmI GAATGC 2 cut(s) 828, 891
BsnI GGCC 3 cut(s) 41, 401, 431
BsoBI CYCGRG 1 cut(s) 665
Bsp1286I GDGCHC 4 cut(s) 116, 423, 1091, 1302
Bsp143I GATC 5 cut(s) 447, 568, 613, 952, 1318
BspACI CCGC 8 cut(s) 82, 98, 145, 416, 428, 459, 502, 1214
BspANI GGCC 3 cut(s) 41, 401, 431
BspCNI CTCAG 5 cut(s) 243, 277, 289, 294, 307
BspHI TCATGA 1 cut(s) 598
BspLI GGNNCC 8 cut(s) 87, 96, 115, 357, 420, 432, 756, 851
BspMI ACCTGC 1 cut(s) 1069
BspOI GCTAGC 1 cut(s) 876
BspPI GGATC 2 cut(s) 455, 1326
BspT107I GGYRCC 2 cut(s) 418, 754
BsrDI GCAATG 1 cut(s) 658
BsrFI RCCGGY 3 cut(s) 41, 62, 103
BsrI ACTGG 1 cut(s) 1164
BssAI RCCGGY 3 cut(s) 41, 62, 103
BssECI CCNNGG 2 cut(s) 423, 960
BssMI GATC 5 cut(s) 447, 568, 613, 952, 1318
BssNAI GTATAC 1 cut(s) 363
BssT1I CCWWGG 1 cut(s) 960
Bst1107I GTATAC 1 cut(s) 363
Bst2UI CCWGG 2 cut(s) 407, 542
Bst4CI ACNGT 4 cut(s) 716, 746, 907, 1261
BstBAI YACGTR 1 cut(s) 1297
BstC8I GCNNGC 8 cut(s) 26, 414, 457, 874, 986, 1186, 1216, 1380
BstDEI CTNAG 6 cut(s) 230, 276, 285, 294, 302, 845
BstDSI CCRYGG 1 cut(s) 423
BstEII GGTNACC 1 cut(s) 1143
BstF5I GGATG 3 cut(s) 525, 844, 1121
BstHHI GCGC 1 cut(s) 1157
BstKTI GATC 5 cut(s) 450, 571, 616, 955, 1321
BstMAI GTCTC 4 cut(s) 281, 300, 787, 1166
BstMBI GATC 5 cut(s) 447, 568, 613, 952, 1318
BstMWI GCNNNNNNNGC 6 cut(s) 151, 374, 398, 418, 551, 1339
BstNI CCWGG 2 cut(s) 407, 542
BstNSI RCATGY 3 cut(s) 250, 866, 988
BstPI GGTNACC 1 cut(s) 1143
BstSCI CCNGG 4 cut(s) 405, 436, 491, 540
BstSLI GKGCMC 3 cut(s) 423, 1091, 1302
BstV1I GCAGC 2 cut(s) 262, 1066
BstZ17I GTATAC 1 cut(s) 363
Bsu36I CCTNAGG 1 cut(s) 845
BsuRI GGCC 3 cut(s) 41, 401, 431
BtgI CCRYGG 1 cut(s) 423
BtsCI GGATG 3 cut(s) 525, 844, 1121
BtsIMutI CAGTG 6 cut(s) 876, 903, 1130, 1157, 1266, 1353
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 8 cut(s) 26, 414, 457, 874, 986, 1186, 1216, 1380
CaiI CAGNNNCTG 3 cut(s) 301, 412, 1265
CciI TCATGA 1 cut(s) 598
CfoI GCGC 1 cut(s) 1157
Cfr10I RCCGGY 3 cut(s) 41, 62, 103
Cfr13I GGNCC 4 cut(s) 39, 44, 430, 1023
CpoI CGGWCCG 1 cut(s) 44
CseI GACGC 1 cut(s) 694
CsiI ACCWGGT 1 cut(s) 405
Csp6I GTAC 3 cut(s) 238, 755, 1165
CspAI ACCGGT 1 cut(s) 103
CspI CGGWCCG 1 cut(s) 44
CviQI GTAC 3 cut(s) 238, 755, 1165
DdeI CTNAG 6 cut(s) 230, 276, 285, 294, 302, 845
DpnI GATC 5 cut(s) 449, 570, 615, 954, 1320
DpnII GATC 5 cut(s) 447, 568, 613, 952, 1318
DrdI GACNNNNNNGTC 1 cut(s) 1283
DseDI GACNNNNNNGTC 1 cut(s) 1283
EaeI YGGCCR 1 cut(s) 399
EciI GGCGGA 1 cut(s) 87
Eco130I CCWWGG 1 cut(s) 960
Eco24I GRGCYC 1 cut(s) 116
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 44, 1023
Eco57I CTGAAG 3 cut(s) 875, 888, 1287
Eco72I CACGTG 1 cut(s) 1297
Eco81I CCTNAGG 1 cut(s) 845
Eco88I CYCGRG 1 cut(s) 665
Eco91I GGTNACC 1 cut(s) 1143
EcoO109I RGGNCCY 1 cut(s) 1023
EcoO65I GGTNACC 1 cut(s) 1143
EcoRII CCWGG 2 cut(s) 405, 540
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 1 cut(s) 960
EcoT38I GRGCYC 1 cut(s) 116
ErhI CCWWGG 1 cut(s) 960
Esp3I CGTCTC 2 cut(s) 787, 1166
FaqI GGGAC 1 cut(s) 620
FauI CCCGC 2 cut(s) 75, 1207
FblI GTMKAC 1 cut(s) 362
Fnu4HI GCNGC 4 cut(s) 251, 429, 460, 1055
FokI GGATG 3 cut(s) 532, 851, 1128
FriOI GRGCYC 1 cut(s) 116
Fsp4HI GCNGC 4 cut(s) 251, 429, 460, 1055
FspBI CTAG 4 cut(s) 203, 617, 761, 873
GlaI GCGC 1 cut(s) 1156
GluI GCNGC 4 cut(s) 251, 429, 460, 1055
GsuI CTGGAG 2 cut(s) 807, 1181
HaeIII GGCC 3 cut(s) 41, 401, 431
HapII CCGG 7 cut(s) 42, 63, 79, 89, 104, 437, 492
HgaI GACGC 1 cut(s) 694
HhaI GCGC 1 cut(s) 1157
Hin6I GCGC 1 cut(s) 1155
HinP1I GCGC 1 cut(s) 1155
HincII GTYRAC 2 cut(s) 1128, 1252
HindII GTYRAC 2 cut(s) 1128, 1252
HindIII AAGCTT 1 cut(s) 676
HinfI GANTC 5 cut(s) 121, 370, 685, 803, 1253
HpaII CCGG 7 cut(s) 42, 63, 79, 89, 104, 437, 492
Hpy166II GTNNAC 7 cut(s) 322, 363, 684, 1128, 1167, 1252, 1300
Hpy188III TCNNGA 5 cut(s) 599, 617, 786, 853, 1401
Hpy8I GTNNAC 7 cut(s) 322, 363, 684, 1128, 1167, 1252, 1300
HpyAV CCTTC 5 cut(s) 7, 158, 307, 850, 1062
HpyCH4III ACNGT 4 cut(s) 716, 746, 907, 1261
HpyCH4IV ACGT 2 cut(s) 780, 1296
HpyCH4V TGCA 8 cut(s) 154, 250, 554, 944, 984, 1100, 1226, 1300
HpyF10VI GCNNNNNNNGC 6 cut(s) 151, 374, 398, 418, 551, 1339
HpyF3I CTNAG 6 cut(s) 230, 276, 285, 294, 302, 845
HpySE526I ACGT 2 cut(s) 780, 1296
HspAI GCGC 1 cut(s) 1155
KpnI GGTACC 1 cut(s) 758
Kzo9I GATC 5 cut(s) 447, 568, 613, 952, 1318
LmnI GCTCC 3 cut(s) 119, 262, 452
Lsp1109I GCAGC 2 cut(s) 262, 1066
LweI GCATC 2 cut(s) 961, 1106
MabI ACCWGGT 1 cut(s) 405
MaeI CTAG 4 cut(s) 203, 617, 761, 873
MaeII ACGT 2 cut(s) 780, 1296
MaeIII GTNAC 5 cut(s) 167, 897, 925, 1143, 1285
MalI GATC 5 cut(s) 449, 570, 615, 954, 1320
MboI GATC 5 cut(s) 447, 568, 613, 952, 1318
MboII GAAGA 2 cut(s) 636, 1052
MfeI CAATTG 1 cut(s) 572
MhlI GDGCHC 4 cut(s) 116, 423, 1091, 1302
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 6 cut(s) 174, 572, 914, 945, 990, 1305
MluNI TGGCCA 1 cut(s) 401
MlyI GAGTC 5 cut(s) 130, 364, 679, 812, 1247
MmeI TCCRAC 1 cut(s) 80
Mox20I TGGCCA 1 cut(s) 401
MscI TGGCCA 1 cut(s) 401
MseI TTAA 1 cut(s) 674
Msp20I TGGCCA 1 cut(s) 401
MspI CCGG 7 cut(s) 42, 63, 79, 89, 104, 437, 492
MspR9I CCNGG 4 cut(s) 407, 438, 493, 542
MunI CAATTG 1 cut(s) 572
Mva1269I GAATGC 2 cut(s) 828, 891
MvaI CCWGG 2 cut(s) 407, 542
MwoI GCNNNNNNNGC 6 cut(s) 151, 374, 398, 418, 551, 1339
NciI CCSGG 2 cut(s) 438, 493
NdeII GATC 5 cut(s) 447, 568, 613, 952, 1318
NheI GCTAGC 1 cut(s) 872
NlaIV GGNNCC 8 cut(s) 87, 96, 115, 357, 420, 432, 756, 851
NmuCI GTSAC 3 cut(s) 897, 925, 1285
NspI RCATGY 3 cut(s) 250, 866, 988
PaeI GCATGC 1 cut(s) 988
PaeR7I CTCGAG 1 cut(s) 665
PagI TCATGA 1 cut(s) 598
PcsI WCGNNNNNNNCGW 2 cut(s) 130, 1281
PctI GAATGC 2 cut(s) 828, 891
PflFI GACNNNGTC 2 cut(s) 779, 1280
PflMI CCANNNNNTGG 1 cut(s) 412
PinAI ACCGGT 1 cut(s) 103
PkrI GCNGC 4 cut(s) 252, 430, 461, 1056
PleI GAGTC 5 cut(s) 129, 364, 679, 811, 1247
PmaCI CACGTG 1 cut(s) 1297
PmlI CACGTG 1 cut(s) 1297
PpsI GAGTC 5 cut(s) 129, 364, 679, 811, 1247
Ppu21I YACGTR 1 cut(s) 1297
PpuMI RGGWCCY 1 cut(s) 1023
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 2 cut(s) 405, 540
PspCI CACGTG 1 cut(s) 1297
PspEI GGTNACC 1 cut(s) 1143
PspGI CCWGG 2 cut(s) 405, 540
PspN4I GGNNCC 8 cut(s) 87, 96, 115, 357, 420, 432, 756, 851
PspPI GGNCC 4 cut(s) 39, 44, 430, 1023
PspPPI RGGWCCY 1 cut(s) 1023
PspXI VCTCGAGB 1 cut(s) 665
PstNI CAGNNNCTG 3 cut(s) 301, 412, 1265
PsyI GACNNNGTC 2 cut(s) 779, 1280
RsaI GTAC 3 cut(s) 239, 756, 1166
RsaNI GTAC 3 cut(s) 238, 755, 1165
Rsr2I CGGWCCG 1 cut(s) 44
RsrII CGGWCCG 1 cut(s) 44
SaqAI TTAA 1 cut(s) 674
SatI GCNGC 4 cut(s) 251, 429, 460, 1055
Sau3AI GATC 5 cut(s) 447, 568, 613, 952, 1318
Sau96I GGNCC 4 cut(s) 39, 44, 430, 1023
SchI GAGTC 5 cut(s) 130, 364, 679, 812, 1247
ScrFI CCNGG 4 cut(s) 407, 438, 493, 542
SduI GDGCHC 4 cut(s) 116, 423, 1091, 1302
SexAI ACCWGGT 1 cut(s) 405
SfaNI GCATC 2 cut(s) 961, 1106
Sfr274I CTCGAG 1 cut(s) 665
SinI GGWCC 2 cut(s) 44, 1023
SlaI CTCGAG 1 cut(s) 665
SmlI CTYRAG 3 cut(s) 18, 118, 665
SmoI CTYRAG 3 cut(s) 18, 118, 665
SphI GCATGC 1 cut(s) 988
Sse9I AATT 6 cut(s) 174, 572, 914, 945, 990, 1305
SsiI CCGC 8 cut(s) 82, 98, 145, 416, 428, 459, 502, 1214
SspMI CTAG 4 cut(s) 203, 617, 761, 873
StyD4I CCNGG 4 cut(s) 405, 436, 491, 540
StyI CCWWGG 1 cut(s) 960
TaaI ACNGT 4 cut(s) 716, 746, 907, 1261
TaiI ACGT 2 cut(s) 783, 1299
TaqI TCGA 9 cut(s) 124, 133, 464, 647, 666, 820, 1246, 1256, 1275
TasI AATT 6 cut(s) 174, 572, 914, 945, 990, 1305
TatI WGTACW 1 cut(s) 1164
TauI GCSGC 2 cut(s) 431, 462
Tru1I TTAA 1 cut(s) 674
Tru9I TTAA 1 cut(s) 674
TscAI CASTG 6 cut(s) 883, 910, 1137, 1164, 1266, 1360
TseFI GTSAC 3 cut(s) 897, 925, 1285
TseI GCWGC 2 cut(s) 250, 1054
Tsp45I GTSAC 3 cut(s) 897, 925, 1285
TspDTI ATGAA 3 cut(s) 202, 401, 587
TspGWI ACGGA 1 cut(s) 348
TspRI CASTG 6 cut(s) 883, 910, 1137, 1164, 1266, 1360
Tth111I GACNNNGTC 2 cut(s) 779, 1280
Van91I CCANNNNNTGG 1 cut(s) 412
VneI GTGCAC 1 cut(s) 1298
VpaK11BI GGWCC 2 cut(s) 44, 1023
XapI RAATTY 1 cut(s) 1305
XbaI TCTAGA 1 cut(s) 616
XceI RCATGY 3 cut(s) 250, 866, 988
XcmI CCANNNNNNNNNTGG 2 cut(s) 391, 409
XhoI CTCGAG 1 cut(s) 665
XmiI GTMKAC 1 cut(s) 362
XspI CTAG 4 cut(s) 203, 617, 761, 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.