Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010304

Physical Location & Seq

Genomic Coordinates Reverse (-)

39693626 .. 39698297

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0324300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGCTGCCGTCTTCCAACACTCGCCGGCCACCGCCATTCCTCTTCACGACCCTCTCTTGCCCTCCCTCCGGTTGATAAAGCAAGCGCTCGATGACTTCAACTCCGGAAACCATTCCGGGTCGGATCTCACTAAGCTTCTATCCGATTGCATCGCAGCTTTCAAGGACAACGTTCAGTACCGAGACGACGCCAGATTCCTCAAGATTTGGTTCCTCTATATGGGGTTTATTGAGGATTTCGAAGGCTTGTTTATGGAAATGTTGGATAGAAAGATATGTATTGGACAGTCTTTGCTTTATGTTTGGTATGCATCCTTTCTAGAGTCCAAAGGCAAGTTATACGATGCGCACATGGTTTATCAGATGGGTATTTCAAGGAATGCTAAGCCTGCTGAGTGGGTGAAGAAAGCACACGGCTTATTTCTTGAGAGGATGTCTGAATTAGCTTCTTCAACTCACAAGGTTGACGACGGTGAATCCATTCAGTTTGACAGCCACATCAATCCATGGTCCAGTTCCACAATCAAAGCCCTATTAAAGAAAATTACTCCTCAACTTACGAAATATGATGGATATCACTCCACTACTAAAGCTTACTCAGGAAAAGTGGCATTGTCTTCTTTGAAGAACTCATCGAGGAACAAGATTATTGAGATAGGTCGTACAAAATACCAGATTACGGGTTATGCAGGTCAAGGTGGTTTTGCTCAAGTATATAAAGCATATGTCAACTGTAACCCTGATGATGTTGTTGCATTAAAGATACAAAAGCCTGCTTTCCCGTGGGAATTCTATATGTACCGTGAACTTGATCAACGAATCTCAGACAAGGAAAGGTCAAGCTTTGGTTTTGCTCAAAGAATGCATCTCTATTCTGACTGTAGTATACTTGTCTGCAACTATATTGCTAATGGGACACTTCAGGATGTAATAAACTCATTTGCAGTCACCGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACCATAGAAATGCTCTACATGTTAGAAACTCTGCATGACGTTGGCATCATTCATGGAGATTTCAAGCCTGATAATCTGCTTATTCGCTATTCTCGGGACTTCCCCACAAAAAATGGATTTCATGACAGAAATGAGCTTACAAAAGATGGATTTCGGGACAGAAGTGGCCCTTGGCTTGATCAGGGTCTTTGCCTTGTGGACTGGGGAAGAGGGATAGATCTGCGTCTCTTTCCTGACAATATGGAGTTTAAGGGAGATTGCCGAACTTCTGGATTTCGTTGTGTGGAGATGCAAGAGAATAAGCCTTGGACATTTCAGGTAGACACATATGGACTCTGTGTTGTTGTCCATATGATGCTGCATAATTCTTACATGGAGATTGACAAGAAACCATCACCTGATGGTGGTTACGTTTATCTACCCAAGGCATCTTTTAAAAGATACTGGAATGTTGAGCTCTGGAAGAATTTCTTTGTGAAACTGCTTAACAGTAATCCTGGCTGCAATGACAAGAAATTGTTGCAAAATCTGAGGAAGTCCTTCCAGGAATACATGTGCTCGGACCCTCACCTTATAAAGAAACTAAGCGACTTACTGGCAAAGCAAAGGAAATCAATGTGTTCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006935 GO:0007275 GO:0008150 GO:0009553 GO:0009555 GO:0009605 GO:0009791 GO:0009856 GO:0009908 GO:0010183 GO:0022414 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042330 GO:0044706 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0050896 GO:0050918 GO:0051704 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04068 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 map04068 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410

Pfam Domains

Protein Families

CBS

Protein Analysis

538

Amino Acids

61.93

Weight (kDa)

8.37

Isoelectric Point (pI)

30.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mad3_BUB1_I	PF08311	16 - 124	1.2e-23	Mad3/BUB1 homology region 1
Pkinase	PF00069	225 - 451	7.4e-12	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010304)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15330
fragaria_vesca	FvH4_6g29660 FvH4_6g29660 FvH4_6g29660 FvH4_6g29660
malus_domestica	MD17G1212300.v1.1
prunus_persica	Prupe.3G087600_v2.0.a1 Prupe.3G087600_v2.0.a1
pyrus_communis	pycom17g21720
rosa_chinensis	RchiOBHm_Chr2g0135251
rosa_laevigata	RLG00000019457
rosa_multiflora	Rmu_sc0002732.1_g000009 Rmu_sc0004443.1_g000002
rosa_roxburghii	Rroxscaffold_2G00109350
rosa_rugosa	Rorug02G0324200 Rorug02G0324300
rosa_samantha	Rh2AG370800 Rh2BG380800 Rh2CG360000 Rh2DG397300
rosa_wichuraiana	Rw2G030620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1562
Acc16I	TGCGCA	1 cut(s)	348
Acc36I	ACCTGC	1 cut(s)	680
AccI	GTMKAC	2 cut(s)	886, 1308
AccIII	TCCGGA	1 cut(s)	104
AciI	CCGC	1 cut(s)	33
AclI	AACGTT	1 cut(s)	171
AclWI	GGATC	1 cut(s)	132
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	2 cut(s)	788, 1453
AcuI	CTGAAG	1 cut(s)	905
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	3 cut(s)	179, 664, 800
AfeI	AGCGCT	1 cut(s)	87
AfiI	CCNNNNNNNGG	4 cut(s)	69, 220, 679, 1391
AflIII	ACRYGT	2 cut(s)	1005, 1539
AgsI	TTSAA	6 cut(s)	100, 163, 375, 453, 625, 1051
AjnI	CCWGG	2 cut(s)	1483, 1530
AjuI	GAANNNNNNNTTGG	2 cut(s)	1141, 1173
AluBI	AGCT	7 cut(s)	136, 158, 446, 593, 843, 1123, 1444
AluI	AGCT	7 cut(s)	136, 158, 446, 593, 843, 1123, 1444
Alw21I	GWGCWC	2 cut(s)	1446, 1547
Alw26I	GTCTC	2 cut(s)	177, 1217
AlwI	GGATC	1 cut(s)	132
Ama87I	CYCGRG	1 cut(s)	1080
Aor13HI	TCCGGA	1 cut(s)	104
Aor51HI	AGCGCT	1 cut(s)	87
AoxI	GGCC	2 cut(s)	27, 1153
ApeKI	GCWGC	4 cut(s)	5, 155, 1345, 1488
ApoI	RAATTY	2 cut(s)	788, 1453
Asp700I	GAANNNNTTC	4 cut(s)	112, 480, 1454, 1526
AspLEI	GCGC	2 cut(s)	88, 349
AspS9I	GGNCC	3 cut(s)	510, 1154, 1549
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	5 cut(s)	412, 485, 940, 1374, 1547
AsuII	TTCGAA	1 cut(s)	240
AvaI	CYCGRG	1 cut(s)	1080
AvaII	GGWCC	2 cut(s)	510, 1549
BanII	GRGCYC	1 cut(s)	1446
BbsI	GAAGAC	2 cut(s)	4, 609
Bbv12I	GWGCWC	2 cut(s)	1446, 1547
BbvI	GCAGC	3 cut(s)	167, 1332, 1475
BccI	CCATC	5 cut(s)	358, 563, 1127, 1382, 1387
BceAI	ACGGC	1 cut(s)	430
BciT130I	CCWGG	2 cut(s)	1485, 1532
BclI	TGATCA	2 cut(s)	811, 1165
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	2 cut(s)	177, 1217
BfaI	CTAG	1 cut(s)	320
BfmI	CTRYAG	1 cut(s)	880
BfoI	RGCGCY	1 cut(s)	89
BfuAI	ACCTGC	1 cut(s)	680
BglII	AGATCT	1 cut(s)	1204
BisI	GCNGC	4 cut(s)	6, 156, 1346, 1489
BlpI	GCTNAGC	1 cut(s)	384
BlsI	GCNGC	4 cut(s)	7, 157, 1347, 1490
Bme1390I	CCNGG	3 cut(s)	118, 1485, 1532
Bme18I	GGWCC	2 cut(s)	510, 1549
BmeT110I	CYCGRG	1 cut(s)	1080
BmgT120I	GGNCC	3 cut(s)	510, 1154, 1549
BmiI	GGNNCC	2 cut(s)	212, 1551
BmrFI	CCNGG	3 cut(s)	118, 1485, 1532
BmrI	ACTGGG	1 cut(s)	1198
BmsI	GCATC	8 cut(s)	159, 320, 334, 874, 1041, 1266, 1332, 1424
BmuI	ACTGGG	1 cut(s)	1198
BpiI	GAAGAC	2 cut(s)	4, 609
Bpu1102I	GCTNAGC	1 cut(s)	384
Bpu14I	TTCGAA	1 cut(s)	240
BpuEI	CTTGAG	3 cut(s)	185, 446, 693
BpuMI	CCSGG	1 cut(s)	118
BsaBI	GATNNNNATC	1 cut(s)	573
BsaHI	GRCGYC	1 cut(s)	189
BsaJI	CCNNGG	6 cut(s)	506, 782, 960, 1157, 1292, 1410
BsaWI	WCCGGW	3 cut(s)	69, 104, 950
BsaXI	ACNNNNNCTCC	2 cut(s)	86, 116
Bsc4I	CCNNNNNNNGG	4 cut(s)	69, 220, 679, 1391
Bse118I	RCCGGY	1 cut(s)	25
Bse1I	ACTGG	4 cut(s)	513, 1193, 1436, 1587
Bse3DI	GCAATG	1 cut(s)	1498
Bse8I	GATNNNNATC	1 cut(s)	573
BseAI	TCCGGA	1 cut(s)	104
BseBI	CCWGG	2 cut(s)	1485, 1532
BseDI	CCNNGG	6 cut(s)	506, 782, 960, 1157, 1292, 1410
BseGI	GGATG	3 cut(s)	311, 438, 931
BseJI	GATNNNNATC	1 cut(s)	573
BseLI	CCNNNNNNNGG	4 cut(s)	69, 220, 679, 1391
BseMI	GCAATG	1 cut(s)	1498
BseMII	CTCAG	4 cut(s)	384, 612, 837, 1508
BseNI	ACTGG	4 cut(s)	513, 1193, 1436, 1587
BseRI	GAGGAG	1 cut(s)	540
BseXI	GCAGC	3 cut(s)	167, 1332, 1475
BshFI	GGCC	2 cut(s)	29, 1155
BsiHKAI	GWGCWC	2 cut(s)	1446, 1547
BsiHKCI	CYCGRG	1 cut(s)	1080
BsiSI	CCGG	5 cut(s)	26, 70, 105, 117, 951
BslFI	GGGAC	3 cut(s)	928, 1097, 1157
BslI	CCNNNNNNNGG	4 cut(s)	69, 220, 679, 1391
BsmAI	GTCTC	2 cut(s)	177, 1217
BsmBI	CGTCTC	2 cut(s)	177, 1217
BsmFI	GGGAC	3 cut(s)	928, 1097, 1157
BsmI	GAATGC	2 cut(s)	385, 867
BsnI	GGCC	2 cut(s)	29, 1155
BsoBI	CYCGRG	1 cut(s)	1080
Bsp119I	TTCGAA	1 cut(s)	240
Bsp1286I	GDGCHC	2 cut(s)	1446, 1547
Bsp13I	TCCGGA	1 cut(s)	104
Bsp143I	GATC	4 cut(s)	124, 811, 1165, 1204
Bsp1720I	GCTNAGC	1 cut(s)	384
Bsp19I	CCATGG	2 cut(s)	506, 960
BspACI	CCGC	1 cut(s)	33
BspANI	GGCC	2 cut(s)	29, 1155
BspCNI	CTCAG	4 cut(s)	385, 611, 836, 1509
BspEI	TCCGGA	1 cut(s)	104
BspHI	TCATGA	1 cut(s)	1108
BspLI	GGNNCC	2 cut(s)	212, 1551
BspMI	ACCTGC	1 cut(s)	680
BspPI	GGATC	1 cut(s)	132
BspT104I	TTCGAA	1 cut(s)	240
BsrDI	GCAATG	1 cut(s)	1498
BsrFI	RCCGGY	1 cut(s)	25
BsrI	ACTGG	4 cut(s)	513, 1193, 1436, 1587
BssAI	RCCGGY	1 cut(s)	25
BssECI	CCNNGG	6 cut(s)	506, 782, 960, 1157, 1292, 1410
BssMI	GATC	4 cut(s)	124, 811, 1165, 1204
BssNAI	GTATAC	1 cut(s)	887
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	5 cut(s)	506, 960, 1157, 1292, 1410
Bst1107I	GTATAC	1 cut(s)	887
Bst2UI	CCWGG	2 cut(s)	1485, 1532
Bst4CI	ACNGT	6 cut(s)	288, 473, 734, 803, 881, 1478
Bst6I	CTCTTC	2 cut(s)	48, 1189
BstACI	GRCGYC	1 cut(s)	189
BstBI	TTCGAA	1 cut(s)	240
BstC8I	GCNNGC	4 cut(s)	27, 84, 390, 774
BstDEI	CTNAG	8 cut(s)	132, 384, 393, 598, 823, 1517, 1571, 1614
BstDSI	CCRYGG	3 cut(s)	506, 782, 960
BstF5I	GGATG	3 cut(s)	311, 438, 931
BstH2I	RGCGCY	1 cut(s)	89
BstHHI	GCGC	2 cut(s)	88, 349
BstKTI	GATC	4 cut(s)	127, 814, 1168, 1207
BstMAI	GTCTC	2 cut(s)	177, 1217
BstMBI	GATC	4 cut(s)	124, 811, 1165, 1204
BstMWI	GCNNNNNNNGC	1 cut(s)	389
BstNI	CCWGG	2 cut(s)	1485, 1532
BstNSI	RCATGY	2 cut(s)	1009, 1543
BstSCI	CCNGG	3 cut(s)	116, 1483, 1530
BstSFI	CTRYAG	1 cut(s)	880
BstV1I	GCAGC	3 cut(s)	167, 1332, 1475
BstV2I	GAAGAC	2 cut(s)	4, 609
BstX2I	RGATCY	2 cut(s)	124, 1204
BstYI	RGATCY	2 cut(s)	124, 1204
BstZ17I	GTATAC	1 cut(s)	887
BsuRI	GGCC	2 cut(s)	29, 1155
BtgI	CCRYGG	3 cut(s)	506, 782, 960
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	3 cut(s)	311, 438, 931
BveI	ACCTGC	1 cut(s)	680
Cac8I	GCNNGC	4 cut(s)	27, 84, 390, 774
CciI	TCATGA	1 cut(s)	1108
CfoI	GCGC	2 cut(s)	88, 349
Cfr10I	RCCGGY	1 cut(s)	25
Cfr13I	GGNCC	3 cut(s)	510, 1154, 1549
CseI	GACGC	2 cut(s)	197, 1199
Csp6I	GTAC	3 cut(s)	178, 663, 799
CviAII	CATG	9 cut(s)	352, 507, 961, 1006, 1022, 1040, 1109, 1360, 1540
CviQI	GTAC	3 cut(s)	178, 663, 799
DdeI	CTNAG	8 cut(s)	132, 384, 393, 598, 823, 1517, 1571, 1614
DpnI	GATC	4 cut(s)	126, 813, 1167, 1206
DpnII	GATC	4 cut(s)	124, 811, 1165, 1204
DraI	TTTAAA	1 cut(s)	1423
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	2 cut(s)	48, 1189
EarI	CTCTTC	2 cut(s)	48, 1189
Ecl136II	GAGCTC	1 cut(s)	1444
Eco130I	CCWWGG	5 cut(s)	506, 960, 1157, 1292, 1410
Eco24I	GRGCYC	1 cut(s)	1446
Eco32I	GATATC	1 cut(s)	575
Eco47I	GGWCC	2 cut(s)	510, 1549
Eco47III	AGCGCT	1 cut(s)	87
Eco53kI	GAGCTC	1 cut(s)	1444
Eco57I	CTGAAG	1 cut(s)	905
Eco88I	CYCGRG	1 cut(s)	1080
EcoICRI	GAGCTC	1 cut(s)	1444
EcoRI	GAATTC	1 cut(s)	788
EcoRII	CCWGG	2 cut(s)	1483, 1530
EcoRV	GATATC	1 cut(s)	575
EcoT14I	CCWWGG	5 cut(s)	506, 960, 1157, 1292, 1410
EcoT22I	ATGCAT	3 cut(s)	313, 867, 980
EcoT38I	GRGCYC	1 cut(s)	1446
ErhI	CCWWGG	5 cut(s)	506, 960, 1157, 1292, 1410
Esp3I	CGTCTC	2 cut(s)	177, 1217
FaeI	CATG	9 cut(s)	355, 510, 964, 1009, 1025, 1043, 1112, 1363, 1543
FalI	AAGNNNNNCTT	4 cut(s)	1141, 1173, 1442, 1474
FaqI	GGGAC	3 cut(s)	928, 1097, 1157
FatI	CATG	9 cut(s)	351, 506, 960, 1005, 1021, 1039, 1108, 1359, 1539
FauNDI	CATATG	3 cut(s)	724, 1315, 1338
FbaI	TGATCA	2 cut(s)	811, 1165
FblI	GTMKAC	2 cut(s)	886, 1308
Fnu4HI	GCNGC	4 cut(s)	6, 156, 1346, 1489
FokI	GGATG	3 cut(s)	298, 445, 938
FriOI	GRGCYC	1 cut(s)	1446
Fsp4HI	GCNGC	4 cut(s)	6, 156, 1346, 1489
FspAI	RTGCGCAY	1 cut(s)	348
FspBI	CTAG	1 cut(s)	320
FspI	TGCGCA	1 cut(s)	348
GlaI	GCGC	2 cut(s)	87, 348
GluI	GCNGC	4 cut(s)	6, 156, 1346, 1489
HaeII	RGCGCY	1 cut(s)	89
HaeIII	GGCC	2 cut(s)	29, 1155
HapII	CCGG	5 cut(s)	26, 70, 105, 117, 951
HgaI	GACGC	2 cut(s)	197, 1199
HhaI	GCGC	2 cut(s)	88, 349
Hin1I	GRCGYC	1 cut(s)	189
Hin1II	CATG	9 cut(s)	355, 510, 964, 1009, 1025, 1043, 1112, 1363, 1543
Hin6I	GCGC	2 cut(s)	86, 347
HinP1I	GCGC	2 cut(s)	86, 347
HincII	GTYRAC	2 cut(s)	466, 730
HindII	GTYRAC	2 cut(s)	466, 730
HindIII	AAGCTT	3 cut(s)	134, 591, 841
HinfI	GANTC	5 cut(s)	195, 323, 476, 819, 1320
HpaII	CCGG	5 cut(s)	26, 70, 105, 117, 951
HphI	GGTGA	5 cut(s)	412, 485, 940, 1374, 1547
Hpy166II	GTNNAC	6 cut(s)	466, 730, 806, 887, 1186, 1309
Hpy188I	TCNGA	8 cut(s)	124, 145, 363, 439, 826, 877, 1518, 1549
Hpy8I	GTNNAC	6 cut(s)	466, 730, 806, 887, 1186, 1309
Hpy99I	CGWCG	2 cut(s)	191, 473
HpyAV	CCTTC	2 cut(s)	236, 1537
HpyCH4III	ACNGT	6 cut(s)	288, 473, 734, 803, 881, 1478
HpyCH4IV	ACGT	3 cut(s)	171, 1026, 1398
HpyF10VI	GCNNNNNNNGC	1 cut(s)	389
HpyF3I	CTNAG	8 cut(s)	132, 384, 393, 598, 823, 1517, 1571, 1614
HpySE526I	ACGT	3 cut(s)	171, 1026, 1398
Hsp92I	GRCGYC	1 cut(s)	189
Hsp92II	CATG	9 cut(s)	355, 510, 964, 1009, 1025, 1043, 1112, 1363, 1543
HspAI	GCGC	2 cut(s)	86, 347
Kpn2I	TCCGGA	1 cut(s)	104
KroI	GCCGGC	1 cut(s)	25
KroNI	GCCGGC	1 cut(s)	27
Ksp22I	TGATCA	2 cut(s)	811, 1165
Kzo9I	GATC	4 cut(s)	124, 811, 1165, 1204
Lsp1109I	GCAGC	3 cut(s)	167, 1332, 1475
LweI	GCATC	8 cut(s)	159, 320, 334, 874, 1041, 1266, 1332, 1424
MaeI	CTAG	1 cut(s)	320
MaeII	ACGT	3 cut(s)	171, 1026, 1398
MaeIII	GTNAC	3 cut(s)	734, 946, 1394
MalI	GATC	4 cut(s)	126, 813, 1167, 1206
MboI	GATC	4 cut(s)	124, 811, 1165, 1204
MboII	GAAGA	9 cut(s)	4, 35, 415, 441, 609, 637, 977, 1206, 1462
MflI	RGATCY	2 cut(s)	124, 1204
MhlI	GDGCHC	2 cut(s)	1446, 1547
MluCI	AATT	6 cut(s)	440, 543, 788, 1351, 1453, 1502
MlyI	GAGTC	2 cut(s)	332, 1314
MmeI	TCCRAC	3 cut(s)	40, 102, 243
Mph1103I	ATGCAT	3 cut(s)	313, 867, 980
MroI	TCCGGA	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	25
MroXI	GAANNNNTTC	4 cut(s)	112, 480, 1454, 1526
MseI	TTAA	5 cut(s)	536, 758, 1236, 1422, 1473
MslI	CAYNNNNRTG	1 cut(s)	995
MspI	CCGG	5 cut(s)	26, 70, 105, 117, 951
MspR9I	CCNGG	3 cut(s)	118, 1485, 1532
Mva1269I	GAATGC	2 cut(s)	385, 867
MvaI	CCWGG	2 cut(s)	1485, 1532
MwoI	GCNNNNNNNGC	1 cut(s)	389
NaeI	GCCGGC	1 cut(s)	27
NciI	CCSGG	1 cut(s)	118
NcoI	CCATGG	2 cut(s)	506, 960
NdeI	CATATG	3 cut(s)	724, 1315, 1338
NdeII	GATC	4 cut(s)	124, 811, 1165, 1204
NgoMIV	GCCGGC	1 cut(s)	25
NlaIII	CATG	9 cut(s)	355, 510, 964, 1009, 1025, 1043, 1112, 1363, 1543
NlaIV	GGNNCC	2 cut(s)	212, 1551
NmuCI	GTSAC	1 cut(s)	946
NsbI	TGCGCA	1 cut(s)	348
NsiI	ATGCAT	3 cut(s)	313, 867, 980
NspI	RCATGY	2 cut(s)	1009, 1543
NspV	TTCGAA	1 cut(s)	240
PagI	TCATGA	1 cut(s)	1108
PciI	ACATGT	2 cut(s)	1005, 1539
PctI	GAATGC	2 cut(s)	385, 867
PdiI	GCCGGC	1 cut(s)	27
PdmI	GAANNNNTTC	4 cut(s)	112, 480, 1454, 1526
PfeI	GAWTC	3 cut(s)	195, 476, 819
PfoI	TCCNGGA	1 cut(s)	1530
PkrI	GCNGC	4 cut(s)	7, 157, 1347, 1490
PleI	GAGTC	2 cut(s)	331, 1314
PpsI	GAGTC	2 cut(s)	331, 1314
PscI	ACATGT	2 cut(s)	1005, 1539
PsiI	TTATAA	1 cut(s)	1562
Psp124BI	GAGCTC	1 cut(s)	1446
Psp1406I	AACGTT	1 cut(s)	171
Psp6I	CCWGG	2 cut(s)	1483, 1530
PspGI	CCWGG	2 cut(s)	1483, 1530
PspN4I	GGNNCC	2 cut(s)	212, 1551
PspPI	GGNCC	3 cut(s)	510, 1154, 1549
PsuI	RGATCY	2 cut(s)	124, 1204
RsaI	GTAC	3 cut(s)	179, 664, 800
RsaNI	GTAC	3 cut(s)	178, 663, 799
RseI	CAYNNNNRTG	1 cut(s)	995
SacI	GAGCTC	1 cut(s)	1446
SaqAI	TTAA	5 cut(s)	536, 758, 1236, 1422, 1473
SatI	GCNGC	4 cut(s)	6, 156, 1346, 1489
Sau3AI	GATC	4 cut(s)	124, 811, 1165, 1204
Sau96I	GGNCC	3 cut(s)	510, 1154, 1549
SchI	GAGTC	2 cut(s)	332, 1314
ScrFI	CCNGG	3 cut(s)	118, 1485, 1532
SduI	GDGCHC	2 cut(s)	1446, 1547
SfaNI	GCATC	8 cut(s)	159, 320, 334, 874, 1041, 1266, 1332, 1424
SfcI	CTRYAG	1 cut(s)	880
SfuI	TTCGAA	1 cut(s)	240
SinI	GGWCC	2 cut(s)	510, 1549
SmiMI	CAYNNNNRTG	1 cut(s)	995
SmlI	CTYRAG	3 cut(s)	200, 425, 708
SmoI	CTYRAG	3 cut(s)	200, 425, 708
Sse9I	AATT	6 cut(s)	440, 543, 788, 1351, 1453, 1502
SsiI	CCGC	1 cut(s)	33
SspMI	CTAG	1 cut(s)	320
SstI	GAGCTC	1 cut(s)	1446
StyD4I	CCNGG	3 cut(s)	116, 1483, 1530
StyI	CCWWGG	5 cut(s)	506, 960, 1157, 1292, 1410
TaaI	ACNGT	6 cut(s)	288, 473, 734, 803, 881, 1478
TaiI	ACGT	3 cut(s)	174, 1029, 1401
TaqI	TCGA	3 cut(s)	90, 240, 635
TasI	AATT	6 cut(s)	440, 543, 788, 1351, 1453, 1502
TfiI	GAWTC	3 cut(s)	195, 476, 819
Tru1I	TTAA	5 cut(s)	536, 758, 1236, 1422, 1473
Tru9I	TTAA	5 cut(s)	536, 758, 1236, 1422, 1473
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	4 cut(s)	5, 155, 1345, 1488
Tsp45I	GTSAC	1 cut(s)	946
TspDTI	ATGAA	2 cut(s)	1028, 1097
VpaK11BI	GGWCC	2 cut(s)	510, 1549
XapI	RAATTY	2 cut(s)	788, 1453
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	2 cut(s)	1009, 1543
XmiI	GTMKAC	2 cut(s)	886, 1308
XmnI	GAANNNNTTC	4 cut(s)	112, 480, 1454, 1526
XspI	CTAG	1 cut(s)	320
Zsp2I	ATGCAT	3 cut(s)	313, 867, 980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.