Prupe.3G089600_v2.0.a1

Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
6657714 .. 6663740
6027 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G089600.1

Sequence Viewer

Length: 1488 bp
ATGGTGTTGGCGCAATTGGGGGGGAGCATTTCACGTGCTCTCCAGCAGATGAGCAATGCGACCGTGATCGACGAGAAGGTCCTGAACGAGTGCCTCAACGAGATCACTCGGGCTTTGCTCCAATCCGATGTTCAATTCAAGCTTGTCCGTGACATGCAGACCAATATAAAAAAGATTGTCAATTTGGATGATCTCGCTGCTGGTCACAACAAGCGCAAGATTATTCAGCAAGCTATATTTAACGAACTTTGCAAAATGCTGGATCCAGGGAAACCGTCTTTCACTCCCAAGAAGGGGAAACCAAGTGTTGTCATGTTTGTTGGTTTACAAGGGTCTGGAAAAACCACCACGTGTACAAAATATGCATATTATCATCAGAAAAAAGGTTGGAAACCTGCCCTAGTGTGTGCAGATACATTTCGAGCTGGTGCATTTGATCAGTTGAAGCAGAATGCCACTAAGGCTAAGATTCCATTTTATGGAAGCTATATGGAGTCGGACCCTGTGAAAATTGCAGTTGAAGGTGTGGAAACGTTCAAAAAGGAGAATTGCGATCTTATAATTGTTGATACTAGTGGGCGTCACAAACAAGAAGCTGCCCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCAACGAAACCGGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCTGCATTTGATCAAGCTCAAGCCTTTAGGCAAAGTGTTTCAGTTGGAGCTGTTATTGTTACAAAAATGGATGGCCATGCAAAGGGAGGTGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCTGTTATATTTATTGGAACAGGAGAGCACATGGACGAGTTTGAAGTTTTTGATGTTAAACCGTTTGTCAGCCGTCTCTTAGGCATGGGCGACTGGTCTGGATTTATGGACAAGATCCATGAAGTTGTTCCTATGGACCAACAGCCAGAACTCTTGCAAAAGCTTTCAGAAGGGAACTTCACATTAAGGATTATGTATGAGCAGTTTCAGAACATACTTAAAATGGGTCCAATTAGCCAGGTCTTCTCAATGCTTCCAGGATTCAGTGCTGAATTAATGCCAAAAGGTCGTGAAAAGGAAAGTCAGGCGAAGATCAAGCGGTACATGACCATGATGGACTCGATGACAAATGAAGAGTTGGATAGCTCAAATCCAAAACTCATCAATGAGTCACGTATAATGCGAATAGCACGAGGTTCTGGTCGTCAAATTAAAGAAGTAATGGAGATGTTTGAAGAATACAAGCGCCTTGCCAAGATATGGAGCAAAATGAAAGGACTTAAGATTCCAAAGAAGGGTGAAATGAGTGCACTATCCCGAAATATGAATGCGCAGCATATGAGCAAAGTCCTTCCTCCCCAGATGCTGAAGCAGATTGGTGGAATGGGTGGCTTACAAAGCTTGATGAAGCAAATGGGTTCTGGTAAAGACATGATGGGGATGTTCGGAGGCGGGGACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

496

Amino Acids

55.03

Weight (kDa)

9.26

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009104)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 560
AasI GACNNNNNNGTC 1 cut(s) 77
Acc16I TGCGCA 1 cut(s) 1356
Acc36I ACCTGC 1 cut(s) 403
AccB7I CCANNNNNTGG 2 cut(s) 479, 1284
AciI CCGC 2 cut(s) 1123, 1476
AclI AACGTT 1 cut(s) 533
AclWI GGATC 4 cut(s) 257, 270, 651, 913
AcoI YGGCCR 1 cut(s) 754
AcuI CTGAAG 2 cut(s) 648, 1412
AcvI CACGTG 2 cut(s) 35, 351
AcyI GRCGYC 1 cut(s) 580
AdeI CACNNNGTG 1 cut(s) 351
AfaI GTAC 2 cut(s) 355, 1127
AfiI CCNNNNNNNGG 6 cut(s) 293, 294, 479, 763, 1284, 1319
AflII CTTAAG 1 cut(s) 1304
AflIII ACRYGT 1 cut(s) 350
AgsI TTSAA 8 cut(s) 134, 139, 445, 521, 538, 608, 848, 1259
AhlI ACTAGT 1 cut(s) 572
AjnI CCWGG 3 cut(s) 265, 1041, 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 114, 146
Alw21I GWGCWC 4 cut(s) 40, 778, 834, 1336
Alw26I GTCTC 1 cut(s) 884
Alw44I GTGCAC 1 cut(s) 1332
AlwI GGATC 4 cut(s) 257, 270, 651, 913
AlwNI CAGNNNCTG 1 cut(s) 1390
Ama87I CYCGRG 1 cut(s) 108
AoxI GGCC 1 cut(s) 754
ApaLI GTGCAC 1 cut(s) 1332
ApeKI GCWGC 5 cut(s) 197, 596, 683, 791, 1357
AseI ATTAAT 1 cut(s) 1079
Asp700I GAANNNNTTC 1 cut(s) 930
AspLEI GCGC 4 cut(s) 13, 216, 1272, 1357
AspS9I GGNCC 4 cut(s) 79, 499, 940, 1031
AsuHPI GGTGA 1 cut(s) 1334
AvaI CYCGRG 1 cut(s) 108
AvaII GGWCC 4 cut(s) 79, 499, 940, 1031
BaeGI GKGCMC 1 cut(s) 1336
BalI TGGCCA 1 cut(s) 756
BamHI GGATCC 1 cut(s) 262
BauI CACGAG 1 cut(s) 1215
BbrPI CACGTG 2 cut(s) 35, 351
BbsI GAAGAC 1 cut(s) 1039
Bbv12I GWGCWC 4 cut(s) 40, 778, 834, 1336
BbvI GCAGC 5 cut(s) 184, 583, 670, 803, 1369
BccI CCATC 3 cut(s) 746, 1132, 1453
BceAI ACGGC 1 cut(s) 861
BciT130I CCWGG 3 cut(s) 267, 1043, 1062
BclI TGATCA 2 cut(s) 436, 691
BcoDI GTCTC 1 cut(s) 884
BcuI ACTAGT 1 cut(s) 572
BfaI CTAG 2 cut(s) 401, 573
BfoI RGCGCY 1 cut(s) 1273
BfrI CTTAAG 1 cut(s) 1304
BfuAI ACCTGC 1 cut(s) 403
BglI GCCNNNNNGGC 1 cut(s) 461
BisI GCNGC 5 cut(s) 198, 597, 684, 792, 1358
BlsI GCNGC 5 cut(s) 199, 598, 685, 793, 1359
Bme1390I CCNGG 3 cut(s) 267, 1043, 1062
Bme18I GGWCC 4 cut(s) 79, 499, 940, 1031
BmeT110I CYCGRG 1 cut(s) 108
BmgT120I GGNCC 4 cut(s) 79, 499, 940, 1031
BmiI GGNNCC 3 cut(s) 264, 501, 1032
BmrFI CCNGG 3 cut(s) 267, 1043, 1062
BmsI GCATC 1 cut(s) 1377
BpiI GAAGAC 1 cut(s) 1039
BpmI CTGGAG 1 cut(s) 26
BpuEI CTTGAG 1 cut(s) 684
BsaAI YACGTR 3 cut(s) 35, 351, 1199
BsaHI GRCGYC 1 cut(s) 580
BsaJI CCNNGG 1 cut(s) 266
BsaWI WCCGGW 1 cut(s) 640
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 6 cut(s) 293, 294, 479, 763, 1284, 1319
Bse1I ACTGG 1 cut(s) 902
Bse3DI GCAATG 1 cut(s) 61
BseBI CCWGG 3 cut(s) 267, 1043, 1062
BseDI CCNNGG 1 cut(s) 266
BseGI GGATG 3 cut(s) 193, 757, 1470
BseLI CCNNNNNNNGG 6 cut(s) 293, 294, 479, 763, 1284, 1319
BseMI GCAATG 1 cut(s) 61
BseNI ACTGG 1 cut(s) 902
BseSI GKGCMC 1 cut(s) 1336
BseXI GCAGC 5 cut(s) 184, 583, 670, 803, 1369
BsgI GTGCAG 1 cut(s) 429
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 1 cut(s) 756
BsiEI CGRYCG 1 cut(s) 63
BsiHKAI GWGCWC 4 cut(s) 40, 778, 834, 1336
BsiHKCI CYCGRG 1 cut(s) 108
BsiSI CCGG 1 cut(s) 641
BslI CCNNNNNNNGG 6 cut(s) 293, 294, 479, 763, 1284, 1319
BsmAI GTCTC 1 cut(s) 884
BsmBI CGTCTC 1 cut(s) 884
BsmI GAATGC 2 cut(s) 457, 1357
BsnI GGCC 1 cut(s) 756
BsoBI CYCGRG 1 cut(s) 108
Bsp1286I GDGCHC 4 cut(s) 40, 778, 834, 1336
Bsp1407I TGTACA 1 cut(s) 353
BspACI CCGC 2 cut(s) 1123, 1476
BspANI GGCC 1 cut(s) 756
BspLI GGNNCC 3 cut(s) 264, 501, 1032
BspMI ACCTGC 1 cut(s) 403
BspPI GGATC 4 cut(s) 257, 270, 651, 913
BspTI CTTAAG 1 cut(s) 1304
BsrDI GCAATG 1 cut(s) 61
BsrGI TGTACA 1 cut(s) 353
BsrI ACTGG 1 cut(s) 902
BssECI CCNNGG 1 cut(s) 266
BssNI GRCGYC 1 cut(s) 580
BssSI CACGAG 1 cut(s) 1215
Bst2BI CACGAG 1 cut(s) 1215
Bst2UI CCWGG 3 cut(s) 267, 1043, 1062
Bst4CI ACNGT 3 cut(s) 64, 276, 867
Bst6I CTCTTC 1 cut(s) 1152
BstACI GRCGYC 1 cut(s) 580
BstAFI CTTAAG 1 cut(s) 1304
BstAUI TGTACA 1 cut(s) 353
BstBAI YACGTR 3 cut(s) 35, 351, 1199
BstC8I GCNNGC 1 cut(s) 231
BstDEI CTNAG 4 cut(s) 459, 465, 779, 883
BstF5I GGATG 3 cut(s) 193, 757, 1470
BstH2I RGCGCY 1 cut(s) 1273
BstHHI GCGC 4 cut(s) 13, 216, 1272, 1357
BstMAI GTCTC 1 cut(s) 884
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 4 cut(s) 461, 782, 791, 1422
BstNI CCWGG 3 cut(s) 267, 1043, 1062
BstNSI RCATGY 1 cut(s) 157
BstSCI CCNGG 3 cut(s) 265, 1041, 1060
BstSLI GKGCMC 1 cut(s) 1336
BstV1I GCAGC 5 cut(s) 184, 583, 670, 803, 1369
BstV2I GAAGAC 1 cut(s) 1039
BstX2I RGATCY 3 cut(s) 262, 643, 918
BstYI RGATCY 3 cut(s) 262, 643, 918
BsuRI GGCC 1 cut(s) 756
BtsCI GGATG 3 cut(s) 193, 757, 1470
BtsIMutI CAGTG 1 cut(s) 1075
BveI ACCTGC 1 cut(s) 403
Cac8I GCNNGC 1 cut(s) 231
CaiI CAGNNNCTG 1 cut(s) 1390
CfoI GCGC 4 cut(s) 13, 216, 1272, 1357
Cfr13I GGNCC 4 cut(s) 79, 499, 940, 1031
CseI GACGC 2 cut(s) 569, 605
Csp6I GTAC 2 cut(s) 354, 1126
CviAII CATG 9 cut(s) 154, 313, 758, 835, 889, 923, 1129, 1135, 1456
CviQI GTAC 2 cut(s) 354, 1126
DdeI CTNAG 4 cut(s) 459, 465, 779, 883
DraIII CACNNNGTG 1 cut(s) 351
DrdI GACNNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 77
EaeI YGGCCR 1 cut(s) 754
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
Eco47I GGWCC 4 cut(s) 79, 499, 940, 1031
Eco57I CTGAAG 2 cut(s) 648, 1412
Eco72I CACGTG 2 cut(s) 35, 351
Eco88I CYCGRG 1 cut(s) 108
EcoO109I RGGNCCY 1 cut(s) 79
EcoRII CCWGG 3 cut(s) 265, 1041, 1060
EcoT22I ATGCAT 1 cut(s) 367
Esp3I CGTCTC 1 cut(s) 884
FaeI CATG 9 cut(s) 157, 316, 761, 838, 892, 926, 1132, 1138, 1459
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FatI CATG 9 cut(s) 153, 312, 757, 834, 888, 922, 1128, 1134, 1455
FauI CCCGC 1 cut(s) 1469
FauNDI CATATG 1 cut(s) 1362
FbaI TGATCA 2 cut(s) 436, 691
Fnu4HI GCNGC 5 cut(s) 198, 597, 684, 792, 1358
FokI GGATG 3 cut(s) 200, 764, 1477
Fsp4HI GCNGC 5 cut(s) 198, 597, 684, 792, 1358
FspBI CTAG 2 cut(s) 401, 573
FspI TGCGCA 1 cut(s) 1356
GlaI GCGC 4 cut(s) 12, 215, 1271, 1356
GluI GCNGC 5 cut(s) 198, 597, 684, 792, 1358
GsuI CTGGAG 1 cut(s) 26
HaeII RGCGCY 1 cut(s) 1273
HaeIII GGCC 1 cut(s) 756
HapII CCGG 1 cut(s) 641
HgaI GACGC 2 cut(s) 569, 605
HhaI GCGC 4 cut(s) 13, 216, 1272, 1357
Hin1I GRCGYC 1 cut(s) 580
Hin1II CATG 9 cut(s) 157, 316, 761, 838, 892, 926, 1132, 1138, 1459
Hin6I GCGC 4 cut(s) 11, 214, 1270, 1355
HinP1I GCGC 4 cut(s) 11, 214, 1270, 1355
HindIII AAGCTT 3 cut(s) 140, 965, 1423
HinfI GANTC 7 cut(s) 469, 494, 802, 1065, 1142, 1193, 1309
HpaII CCGG 1 cut(s) 641
HphI GGTGA 1 cut(s) 1334
Hpy166II GTNNAC 3 cut(s) 326, 354, 1334
Hpy188I TCNGA 7 cut(s) 127, 378, 499, 628, 973, 1014, 1472
Hpy188III TCNNGA 5 cut(s) 82, 336, 903, 1094, 1341
Hpy8I GTNNAC 3 cut(s) 326, 354, 1334
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 6 cut(s) 70, 286, 515, 968, 1312, 1385
HpyCH4III ACNGT 3 cut(s) 64, 276, 867
HpyCH4IV ACGT 4 cut(s) 34, 350, 533, 1198
HpyF10VI GCNNNNNNNGC 4 cut(s) 461, 782, 791, 1422
HpyF3I CTNAG 4 cut(s) 459, 465, 779, 883
HpySE526I ACGT 4 cut(s) 34, 350, 533, 1198
Hsp92I GRCGYC 1 cut(s) 580
Hsp92II CATG 9 cut(s) 157, 316, 761, 838, 892, 926, 1132, 1138, 1459
HspAI GCGC 4 cut(s) 11, 214, 1270, 1355
Ksp22I TGATCA 2 cut(s) 436, 691
LmnI GCTCC 4 cut(s) 24, 123, 728, 1287
Lsp1109I GCAGC 5 cut(s) 184, 583, 670, 803, 1369
LweI GCATC 1 cut(s) 1377
MaeI CTAG 2 cut(s) 401, 573
MaeII ACGT 4 cut(s) 34, 350, 533, 1198
MaeIII GTNAC 5 cut(s) 149, 203, 581, 739, 1194
MboII GAAGA 5 cut(s) 620, 1039, 1126, 1169, 1271
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 3 cut(s) 262, 643, 918
MhlI GDGCHC 4 cut(s) 40, 778, 834, 1336
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 9 cut(s) 14, 134, 181, 510, 547, 561, 1035, 1076, 1233
MluNI TGGCCA 1 cut(s) 756
MlyI GAGTC 4 cut(s) 503, 811, 1136, 1202
MmeI TCCRAC 4 cut(s) 368, 477, 706, 1143
MnlI CCTC 5 cut(s) 104, 761, 1211, 1389, 1466
Mox20I TGGCCA 1 cut(s) 756
Mph1103I ATGCAT 1 cut(s) 367
MroXI GAANNNNTTC 1 cut(s) 930
MscI TGGCCA 1 cut(s) 756
MseI TTAA 7 cut(s) 240, 861, 989, 1023, 1079, 1236, 1305
MslI CAYNNNNRTG 1 cut(s) 1133
Msp20I TGGCCA 1 cut(s) 756
MspCI CTTAAG 1 cut(s) 1304
MspI CCGG 1 cut(s) 641
MspR9I CCNGG 3 cut(s) 267, 1043, 1062
MunI CAATTG 1 cut(s) 14
Mva1269I GAATGC 2 cut(s) 457, 1357
MvaI CCWGG 3 cut(s) 267, 1043, 1062
MwoI GCNNNNNNNGC 4 cut(s) 461, 782, 791, 1422
NdeI CATATG 1 cut(s) 1362
NlaIII CATG 9 cut(s) 157, 316, 761, 838, 892, 926, 1132, 1138, 1459
NlaIV GGNNCC 3 cut(s) 264, 501, 1032
NmuCI GTSAC 4 cut(s) 149, 203, 581, 1194
NsbI TGCGCA 1 cut(s) 1356
NsiI ATGCAT 1 cut(s) 367
NspI RCATGY 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 1204
PctI GAATGC 2 cut(s) 457, 1357
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 3 cut(s) 469, 1065, 1309
PflMI CCANNNNNTGG 2 cut(s) 479, 1284
PfoI TCCNGGA 1 cut(s) 1060
PkrI GCNGC 5 cut(s) 199, 598, 685, 793, 1359
PleI GAGTC 4 cut(s) 502, 810, 1136, 1201
PmaCI CACGTG 2 cut(s) 35, 351
PmlI CACGTG 2 cut(s) 35, 351
PpsI GAGTC 4 cut(s) 502, 810, 1136, 1201
Ppu21I YACGTR 3 cut(s) 35, 351, 1199
PpuMI RGGWCCY 1 cut(s) 79
PshBI ATTAAT 1 cut(s) 1079
PsiI TTATAA 1 cut(s) 560
Psp1406I AACGTT 1 cut(s) 533
Psp5II RGGWCCY 1 cut(s) 79
Psp6I CCWGG 3 cut(s) 265, 1041, 1060
PspCI CACGTG 2 cut(s) 35, 351
PspGI CCWGG 3 cut(s) 265, 1041, 1060
PspN4I GGNNCC 3 cut(s) 264, 501, 1032
PspPI GGNCC 4 cut(s) 79, 499, 940, 1031
PspPPI RGGWCCY 1 cut(s) 79
PstNI CAGNNNCTG 1 cut(s) 1390
PsuI RGATCY 3 cut(s) 262, 643, 918
RsaI GTAC 2 cut(s) 355, 1127
RsaNI GTAC 2 cut(s) 354, 1126
RseI CAYNNNNRTG 1 cut(s) 1133
SaqAI TTAA 7 cut(s) 240, 861, 989, 1023, 1079, 1236, 1305
SatI GCNGC 5 cut(s) 198, 597, 684, 792, 1358
Sau96I GGNCC 4 cut(s) 79, 499, 940, 1031
SchI GAGTC 4 cut(s) 503, 811, 1136, 1202
ScrFI CCNGG 3 cut(s) 267, 1043, 1062
SduI GDGCHC 4 cut(s) 40, 778, 834, 1336
SfaNI GCATC 1 cut(s) 1377
SinI GGWCC 4 cut(s) 79, 499, 940, 1031
SmiMI CAYNNNNRTG 1 cut(s) 1133
SmlI CTYRAG 2 cut(s) 699, 1304
SmoI CTYRAG 2 cut(s) 699, 1304
SpeI ACTAGT 1 cut(s) 572
Sse9I AATT 9 cut(s) 14, 134, 181, 510, 547, 561, 1035, 1076, 1233
SsiI CCGC 2 cut(s) 1123, 1476
SspMI CTAG 2 cut(s) 401, 573
StyD4I CCNGG 3 cut(s) 265, 1041, 1060
TaaI ACNGT 3 cut(s) 64, 276, 867
TaiI ACGT 4 cut(s) 37, 353, 536, 1201
TaqI TCGA 3 cut(s) 69, 421, 1145
TasI AATT 9 cut(s) 14, 134, 181, 510, 547, 561, 1035, 1076, 1233
TatI WGTACW 1 cut(s) 353
TfiI GAWTC 3 cut(s) 469, 1065, 1309
Tru1I TTAA 7 cut(s) 240, 861, 989, 1023, 1079, 1236, 1305
Tru9I TTAA 7 cut(s) 240, 861, 989, 1023, 1079, 1236, 1305
TscAI CASTG 1 cut(s) 1075
TseFI GTSAC 4 cut(s) 149, 203, 581, 1194
TseI GCWGC 5 cut(s) 197, 596, 683, 791, 1357
Tsp45I GTSAC 4 cut(s) 149, 203, 581, 1194
TspDTI ATGAA 5 cut(s) 939, 1170, 1310, 1364, 1445
TspGWI ACGGA 1 cut(s) 137
TspRI CASTG 1 cut(s) 1075
Van91I CCANNNNNTGG 2 cut(s) 479, 1284
Vha464I CTTAAG 1 cut(s) 1304
VneI GTGCAC 1 cut(s) 1332
VpaK11BI GGWCC 4 cut(s) 79, 499, 940, 1031
VspI ATTAAT 1 cut(s) 1079
XceI RCATGY 1 cut(s) 157
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 2 cut(s) 401, 573
Zsp2I ATGCAT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.