Clustered mitochondria protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15290 AT1G15290 |
| fragaria_vesca | FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 FvH4_6g29390 |
| malus_domestica | MD17G1215200.v1.1 |
| prunus_persica | Prupe.3G090800_v2.0.a1 Prupe.3G090800_v2.0.a1 Prupe.3G090800_v2.0.a1 |
| pyrus_communis | pycom17g21960 |
| rosa_chinensis | RchiOBHm_Chr2g0134791 |
| rosa_laevigata | RLG00000019422 |
| rosa_roxburghii | Rroxscaffold_2G00109750 |
| rosa_rugosa | Rorug02G0320100 Rorug02G0320200 |
| rosa_samantha | Rh2AG373500 Rh2BG377700 Rh2CG356100 Rh2DG394700 |
| rosa_wichuraiana | Rw2G030300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4383 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 92, 116, 4666 |
| Acc36I | ACCTGC | 3 cut(s) | 1687, 2332, 3069 |
| AccB1I | GGYRCC | 1 cut(s) | 3958 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 778, 2138 |
| AccI | GTMKAC | 1 cut(s) | 4287 |
| AccII | CGCG | 2 cut(s) | 499, 663 |
| AcoI | YGGCCR | 3 cut(s) | 2140, 2415, 3691 |
| AcvI | CACGTG | 2 cut(s) | 331, 485 |
| AcyI | GRCGYC | 1 cut(s) | 560 |
| AflII | CTTAAG | 2 cut(s) | 1358, 3200 |
| AflIII | ACRYGT | 2 cut(s) | 2966, 3043 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 409 |
| AjnI | CCWGG | 9 cut(s) | 348, 440, 449, 987, 1019, 2412, 3501, 3964, 4501 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 2413, 2445, 2826, 2858, 4382, 4414 |
| AleI | CACNNNNGTG | 2 cut(s) | 2781, 3357 |
| Alw21I | GWGCWC | 3 cut(s) | 449, 484, 2603 |
| Alw44I | GTGCAC | 1 cut(s) | 480 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 4217, 4274, 4325, 4343, 4991 |
| Ama87I | CYCGRG | 2 cut(s) | 536, 2262 |
| ApaLI | GTGCAC | 1 cut(s) | 480 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3920, 3952 |
| AseI | ATTAAT | 2 cut(s) | 2829, 3335 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4098 |
| AspLEI | GCGC | 3 cut(s) | 499, 663, 2187 |
| AsuC2I | CCSGG | 1 cut(s) | 401 |
| AsuHPI | GGTGA | 9 cut(s) | 680, 878, 1013, 2121, 2795, 2972, 3344, 3762, 4247 |
| AsuII | TTCGAA | 2 cut(s) | 1636, 3401 |
| AvaI | CYCGRG | 2 cut(s) | 536, 2262 |
| AvaII | GGWCC | 3 cut(s) | 346, 387, 3667 |
| BaeGI | GKGCMC | 1 cut(s) | 484 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3434, 3467 |
| BalI | TGGCCA | 1 cut(s) | 2417 |
| BamHI | GGATCC | 4 cut(s) | 2114, 3314, 4522, 4729 |
| BanI | GGYRCC | 1 cut(s) | 3958 |
| BanII | GRGCYC | 1 cut(s) | 449 |
| BauI | CACGAG | 2 cut(s) | 653, 3065 |
| BbrPI | CACGTG | 2 cut(s) | 331, 485 |
| BbsI | GAAGAC | 3 cut(s) | 269, 2897, 4008 |
| Bbv12I | GWGCWC | 3 cut(s) | 449, 484, 2603 |
| BceAI | ACGGC | 4 cut(s) | 439, 448, 2127, 2273 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2319, 2353 |
| BciT130I | CCWGG | 9 cut(s) | 350, 442, 451, 989, 1021, 2414, 3503, 3966, 4503 |
| BciVI | GTATCC | 1 cut(s) | 1430 |
| BclI | TGATCA | 3 cut(s) | 850, 2851, 3391 |
| BcnI | CCSGG | 1 cut(s) | 401 |
| BfaI | CTAG | 9 cut(s) | 1623, 1817, 1899, 2696, 2759, 3374, 3521, 4347, 4581 |
| BfmI | CTRYAG | 6 cut(s) | 1026, 1755, 3783, 4086, 4155, 4527 |
| BfrI | CTTAAG | 2 cut(s) | 1358, 3200 |
| BfuAI | ACCTGC | 3 cut(s) | 1687, 2332, 3069 |
| BfuI | GTATCC | 1 cut(s) | 1430 |
| BglII | AGATCT | 1 cut(s) | 1694 |
| BlpI | GCTNAGC | 2 cut(s) | 800, 4694 |
| Bme18I | GGWCC | 3 cut(s) | 346, 387, 3667 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 409 |
| BmeT110I | CYCGRG | 2 cut(s) | 536, 2262 |
| BmrI | ACTGGG | 4 cut(s) | 69, 4138, 4836, 4968 |
| BmuI | ACTGGG | 4 cut(s) | 69, 4138, 4836, 4968 |
| BpiI | GAAGAC | 3 cut(s) | 269, 2897, 4008 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 575, 607 |
| BpmI | CTGGAG | 9 cut(s) | 433, 1156, 2525, 2684, 3308, 3775, 3888, 3948, 4206 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 800, 4694 |
| Bpu14I | TTCGAA | 2 cut(s) | 1636, 3401 |
| BpuEI | CTTGAG | 4 cut(s) | 1191, 1573, 1688, 2479 |
| BpuMI | CCSGG | 1 cut(s) | 401 |
| BsaAI | YACGTR | 3 cut(s) | 331, 485, 1157 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2790 |
| BsaHI | GRCGYC | 1 cut(s) | 560 |
| BsaI | GGTCTC | 2 cut(s) | 1080, 4590 |
| BsaWI | WCCGGW | 3 cut(s) | 467, 1089, 3669 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3688, 3718, 3772, 3802, 4314, 4344 |
| Bse118I | RCCGGY | 2 cut(s) | 3689, 4935 |
| Bse3DI | GCAATG | 3 cut(s) | 706, 2292, 2402 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2790 |
| BseBI | CCWGG | 9 cut(s) | 350, 442, 451, 989, 1021, 2414, 3503, 3966, 4503 |
| BseJI | GATNNNNATC | 1 cut(s) | 2790 |
| BseMI | GCAATG | 3 cut(s) | 706, 2292, 2402 |
| BseRI | GAGGAG | 7 cut(s) | 643, 1082, 1085, 1539, 2060, 4939, 4942 |
| BseSI | GKGCMC | 1 cut(s) | 484 |
| BseX3I | CGGCCG | 1 cut(s) | 3691 |
| BseYI | CCCAGC | 3 cut(s) | 1722, 3851, 4336 |
| BsgI | GTGCAG | 4 cut(s) | 343, 1748, 3047, 3200 |
| Bsh1236I | CGCG | 2 cut(s) | 499, 663 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3694, 4370 |
| BshNI | GGYRCC | 1 cut(s) | 3958 |
| BsiEI | CGRYCG | 2 cut(s) | 3694, 4370 |
| BsiHKAI | GWGCWC | 3 cut(s) | 449, 484, 2603 |
| BsiHKCI | CYCGRG | 2 cut(s) | 536, 2262 |
| BsiSI | CCGG | 7 cut(s) | 401, 468, 1090, 3670, 3690, 3694, 4936 |
| BslFI | GGGAC | 3 cut(s) | 1253, 2187, 3773 |
| BsmFI | GGGAC | 3 cut(s) | 1253, 2187, 3773 |
| BsmI | GAATGC | 2 cut(s) | 823, 1186 |
| Bso31I | GGTCTC | 2 cut(s) | 1080, 4590 |
| BsoBI | CYCGRG | 2 cut(s) | 536, 2262 |
| Bsp119I | TTCGAA | 2 cut(s) | 1636, 3401 |
| Bsp1286I | GDGCHC | 3 cut(s) | 449, 484, 2603 |
| Bsp1407I | TGTACA | 2 cut(s) | 3040, 4965 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 800, 4694 |
| BspFNI | CGCG | 2 cut(s) | 499, 663 |
| BspHI | TCATGA | 4 cut(s) | 217, 1393, 2248, 4473 |
| BspMAI | CTGCAG | 1 cut(s) | 3787 |
| BspMI | ACCTGC | 3 cut(s) | 1687, 2332, 3069 |
| BspQI | GCTCTTC | 1 cut(s) | 2608 |
| BspT104I | TTCGAA | 2 cut(s) | 1636, 3401 |
| BspT107I | GGYRCC | 1 cut(s) | 3958 |
| BspTI | CTTAAG | 2 cut(s) | 1358, 3200 |
| BspTNI | GGTCTC | 2 cut(s) | 1080, 4590 |
| BsrDI | GCAATG | 3 cut(s) | 706, 2292, 2402 |
| BsrFI | RCCGGY | 2 cut(s) | 3689, 4935 |
| BsrGI | TGTACA | 2 cut(s) | 3040, 4965 |
| BssAI | RCCGGY | 2 cut(s) | 3689, 4935 |
| BssNAI | GTATAC | 1 cut(s) | 4288 |
| BssNI | GRCGYC | 1 cut(s) | 560 |
| BssSI | CACGAG | 2 cut(s) | 653, 3065 |
| BssT1I | CCWWGG | 2 cut(s) | 1332, 1407 |
| Bst1107I | GTATAC | 1 cut(s) | 4288 |
| Bst2BI | CACGAG | 2 cut(s) | 653, 3065 |
| Bst2UI | CCWGG | 9 cut(s) | 350, 442, 451, 989, 1021, 2414, 3503, 3966, 4503 |
| Bst6I | CTCTTC | 7 cut(s) | 57, 288, 1633, 1838, 2608, 3018, 4916 |
| BstACI | GRCGYC | 1 cut(s) | 560 |
| BstAFI | CTTAAG | 2 cut(s) | 1358, 3200 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1157, 3338, 4690 |
| BstAUI | TGTACA | 2 cut(s) | 3040, 4965 |
| BstBAI | YACGTR | 3 cut(s) | 331, 485, 1157 |
| BstBI | TTCGAA | 2 cut(s) | 1636, 3401 |
| BstC8I | GCNNGC | 9 cut(s) | 358, 1048, 3124, 3343, 3435, 4406, 4518, 4677, 4937 |
| BstDSI | CCRYGG | 1 cut(s) | 4364 |
| BstEII | GGTNACC | 1 cut(s) | 3350 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3065 |
| BstFNI | CGCG | 2 cut(s) | 499, 663 |
| BstHHI | GCGC | 3 cut(s) | 499, 663, 2187 |
| BstMCI | CGRYCG | 2 cut(s) | 3694, 4370 |
| BstNI | CCWGG | 9 cut(s) | 350, 442, 451, 989, 1021, 2414, 3503, 3966, 4503 |
| BstNSI | RCATGY | 6 cut(s) | 192, 2281, 2594, 2970, 3047, 4487 |
| BstPI | GGTNACC | 1 cut(s) | 3350 |
| BstSFI | CTRYAG | 6 cut(s) | 1026, 1755, 3783, 4086, 4155, 4527 |
| BstSLI | GKGCMC | 1 cut(s) | 484 |
| BstUI | CGCG | 2 cut(s) | 499, 663 |
| BstV2I | GAAGAC | 3 cut(s) | 269, 2897, 4008 |
| BstX2I | RGATCY | 8 cut(s) | 784, 1694, 2114, 2881, 3232, 3314, 4522, 4729 |
| BstYI | RGATCY | 8 cut(s) | 784, 1694, 2114, 2881, 3232, 3314, 4522, 4729 |
| BstZ17I | GTATAC | 1 cut(s) | 4288 |
| BstZI | CGGCCG | 1 cut(s) | 3691 |
| BsuI | GTATCC | 1 cut(s) | 1430 |
| BtgI | CCRYGG | 1 cut(s) | 4364 |
| BtsI | GCAGTG | 2 cut(s) | 1440, 3983 |
| BveI | ACCTGC | 3 cut(s) | 1687, 2332, 3069 |
| Cac8I | GCNNGC | 9 cut(s) | 358, 1048, 3124, 3343, 3435, 4406, 4518, 4677, 4937 |
| CaiI | CAGNNNCTG | 5 cut(s) | 4217, 4274, 4325, 4343, 4991 |
| CciI | TCATGA | 4 cut(s) | 217, 1393, 2248, 4473 |
| CfoI | GCGC | 3 cut(s) | 499, 663, 2187 |
| Cfr10I | RCCGGY | 2 cut(s) | 3689, 4935 |
| CpoI | CGGWCCG | 1 cut(s) | 387 |
| CseI | GACGC | 4 cut(s) | 568, 647, 1991, 3257 |
| CsiI | ACCWGGT | 1 cut(s) | 348 |
| CspI | CGGWCCG | 1 cut(s) | 387 |
| DraI | TTTAAA | 3 cut(s) | 1138, 1831, 2928 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 92, 116, 4666 |
| DriI | GACNNNNNGTC | 1 cut(s) | 409 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 92, 116, 4666 |
| EaeI | YGGCCR | 3 cut(s) | 2140, 2415, 3691 |
| EagI | CGGCCG | 1 cut(s) | 3691 |
| Eam1104I | CTCTTC | 7 cut(s) | 57, 288, 1633, 1838, 2608, 3018, 4916 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 409 |
| EarI | CTCTTC | 7 cut(s) | 57, 288, 1633, 1838, 2608, 3018, 4916 |
| EciI | GGCGGA | 2 cut(s) | 379, 1318 |
| Ecl136II | GAGCTC | 1 cut(s) | 447 |
| EclXI | CGGCCG | 1 cut(s) | 3691 |
| Eco130I | CCWWGG | 2 cut(s) | 1332, 1407 |
| Eco24I | GRGCYC | 1 cut(s) | 449 |
| Eco31I | GGTCTC | 2 cut(s) | 1080, 4590 |
| Eco32I | GATATC | 1 cut(s) | 1951 |
| Eco47I | GGWCC | 3 cut(s) | 346, 387, 3667 |
| Eco52I | CGGCCG | 1 cut(s) | 3691 |
| Eco53kI | GAGCTC | 1 cut(s) | 447 |
| Eco72I | CACGTG | 2 cut(s) | 331, 485 |
| Eco88I | CYCGRG | 2 cut(s) | 536, 2262 |
| Eco91I | GGTNACC | 1 cut(s) | 3350 |
| EcoICRI | GAGCTC | 1 cut(s) | 447 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3065 |
| EcoO65I | GGTNACC | 1 cut(s) | 3350 |
| EcoRII | CCWGG | 9 cut(s) | 348, 440, 449, 987, 1019, 2412, 3501, 3964, 4501 |
| EcoRV | GATATC | 1 cut(s) | 1951 |
| EcoT14I | CCWWGG | 2 cut(s) | 1332, 1407 |
| EcoT22I | ATGCAT | 3 cut(s) | 823, 2166, 3334 |
| EcoT38I | GRGCYC | 1 cut(s) | 449 |
| ErhI | CCWWGG | 2 cut(s) | 1332, 1407 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 3339, 3371, 4299, 4331, 4811, 4843 |
| FaqI | GGGAC | 3 cut(s) | 1253, 2187, 3773 |
| FauNDI | CATATG | 3 cut(s) | 823, 877, 1876 |
| FbaI | TGATCA | 3 cut(s) | 850, 2851, 3391 |
| FblI | GTMKAC | 1 cut(s) | 4287 |
| FriOI | GRGCYC | 1 cut(s) | 449 |
| FspBI | CTAG | 9 cut(s) | 1623, 1817, 1899, 2696, 2759, 3374, 3521, 4347, 4581 |
| GlaI | GCGC | 3 cut(s) | 498, 662, 2186 |
| GsaI | CCCAGC | 3 cut(s) | 1726, 3855, 4340 |
| GsuI | CTGGAG | 9 cut(s) | 433, 1156, 2525, 2684, 3308, 3775, 3888, 3948, 4206 |
| HapII | CCGG | 7 cut(s) | 401, 468, 1090, 3670, 3690, 3694, 4936 |
| HgaI | GACGC | 4 cut(s) | 568, 647, 1991, 3257 |
| HhaI | GCGC | 3 cut(s) | 499, 663, 2187 |
| Hin1I | GRCGYC | 1 cut(s) | 560 |
| Hin6I | GCGC | 3 cut(s) | 497, 661, 2185 |
| HinP1I | GCGC | 3 cut(s) | 497, 661, 2185 |
| HincII | GTYRAC | 3 cut(s) | 436, 1546, 2305 |
| HindII | GTYRAC | 3 cut(s) | 436, 1546, 2305 |
| HindIII | AAGCTT | 3 cut(s) | 840, 3610, 4205 |
| HpaII | CCGG | 7 cut(s) | 401, 468, 1090, 3670, 3690, 3694, 4936 |
| HphI | GGTGA | 9 cut(s) | 680, 878, 1013, 2121, 2795, 2972, 3344, 3762, 4247 |
| Hpy166II | GTNNAC | 9 cut(s) | 436, 482, 1355, 1546, 2147, 2305, 2972, 4288, 4609 |
| Hpy8I | GTNNAC | 9 cut(s) | 436, 482, 1355, 1546, 2147, 2305, 2972, 4288, 4609 |
| Hpy99I | CGWCG | 2 cut(s) | 562, 668 |
| HpyCH4IV | ACGT | 6 cut(s) | 330, 484, 1156, 1261, 2999, 3009 |
| HpySE526I | ACGT | 6 cut(s) | 330, 484, 1156, 1261, 2999, 3009 |
| Hsp92I | GRCGYC | 1 cut(s) | 560 |
| HspAI | GCGC | 3 cut(s) | 497, 661, 2185 |
| KroI | GCCGGC | 1 cut(s) | 4935 |
| KroNI | GCCGGC | 1 cut(s) | 4937 |
| Ksp22I | TGATCA | 3 cut(s) | 850, 2851, 3391 |
| LguI | GCTCTTC | 1 cut(s) | 2608 |
| LmnI | GCTCC | 9 cut(s) | 444, 452, 1175, 1526, 2047, 3098, 3289, 3793, 4492 |
| MabI | ACCWGGT | 1 cut(s) | 348 |
| MaeI | CTAG | 9 cut(s) | 1623, 1817, 1899, 2696, 2759, 3374, 3521, 4347, 4581 |
| MaeII | ACGT | 6 cut(s) | 330, 484, 1156, 1261, 2999, 3009 |
| MfeI | CAATTG | 3 cut(s) | 915, 1803, 2331 |
| MflI | RGATCY | 8 cut(s) | 784, 1694, 2114, 2881, 3232, 3314, 4522, 4729 |
| MhlI | GDGCHC | 3 cut(s) | 449, 484, 2603 |
| MlsI | TGGCCA | 1 cut(s) | 2417 |
| MluNI | TGGCCA | 1 cut(s) | 2417 |
| MlyI | GAGTC | 6 cut(s) | 398, 932, 1760, 2639, 4246, 4841 |
| MmeI | TCCRAC | 7 cut(s) | 581, 597, 2193, 2411, 2607, 4095, 4128 |
| Mox20I | TGGCCA | 1 cut(s) | 2417 |
| Mph1103I | ATGCAT | 3 cut(s) | 823, 2166, 3334 |
| MroNI | GCCGGC | 1 cut(s) | 4935 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4098 |
| MscI | TGGCCA | 1 cut(s) | 2417 |
| MslI | CAYNNNNRTG | 5 cut(s) | 2781, 3008, 3357, 3480, 4764 |
| Msp20I | TGGCCA | 1 cut(s) | 2417 |
| MspA1I | CMGCKG | 5 cut(s) | 3254, 3430, 4214, 4274, 4343 |
| MspCI | CTTAAG | 2 cut(s) | 1358, 3200 |
| MspI | CCGG | 7 cut(s) | 401, 468, 1090, 3670, 3690, 3694, 4936 |
| MunI | CAATTG | 3 cut(s) | 915, 1803, 2331 |
| Mva1269I | GAATGC | 2 cut(s) | 823, 1186 |
| MvaI | CCWGG | 9 cut(s) | 350, 442, 451, 989, 1021, 2414, 3503, 3966, 4503 |
| MvnI | CGCG | 2 cut(s) | 499, 663 |
| NaeI | GCCGGC | 1 cut(s) | 4937 |
| NciI | CCSGG | 1 cut(s) | 401 |
| NdeI | CATATG | 3 cut(s) | 823, 877, 1876 |
| NgoMIV | GCCGGC | 1 cut(s) | 4935 |
| NmuCI | GTSAC | 6 cut(s) | 94, 668, 2235, 3350, 4844, 4915 |
| NsiI | ATGCAT | 3 cut(s) | 823, 2166, 3334 |
| NspI | RCATGY | 6 cut(s) | 192, 2281, 2594, 2970, 3047, 4487 |
| NspV | TTCGAA | 2 cut(s) | 1636, 3401 |
| OliI | CACNNNNGTG | 2 cut(s) | 2781, 3357 |
| PaeR7I | CTCGAG | 1 cut(s) | 2262 |
| PagI | TCATGA | 4 cut(s) | 217, 1393, 2248, 4473 |
| PasI | CCCWGGG | 1 cut(s) | 1020 |
| PciI | ACATGT | 2 cut(s) | 2966, 3043 |
| PciSI | GCTCTTC | 1 cut(s) | 2608 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 651, 660 |
| PctI | GAATGC | 2 cut(s) | 823, 1186 |
| PdiI | GCCGGC | 1 cut(s) | 4937 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4098 |
| PflFI | GACNNNGTC | 1 cut(s) | 2487 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 778, 2138 |
| PleI | GAGTC | 6 cut(s) | 398, 931, 1760, 2638, 4246, 4841 |
| PmaCI | CACGTG | 2 cut(s) | 331, 485 |
| PmlI | CACGTG | 2 cut(s) | 331, 485 |
| PpsI | GAGTC | 6 cut(s) | 398, 931, 1760, 2638, 4246, 4841 |
| Ppu21I | YACGTR | 3 cut(s) | 331, 485, 1157 |
| PscI | ACATGT | 2 cut(s) | 2966, 3043 |
| PshBI | ATTAAT | 2 cut(s) | 2829, 3335 |
| PsiI | TTATAA | 1 cut(s) | 4383 |
| Psp124BI | GAGCTC | 1 cut(s) | 449 |
| Psp6I | CCWGG | 9 cut(s) | 348, 440, 449, 987, 1019, 2412, 3501, 3964, 4501 |
| PspCI | CACGTG | 2 cut(s) | 331, 485 |
| PspEI | GGTNACC | 1 cut(s) | 3350 |
| PspFI | CCCAGC | 3 cut(s) | 1722, 3851, 4336 |
| PspGI | CCWGG | 9 cut(s) | 348, 440, 449, 987, 1019, 2412, 3501, 3964, 4501 |
| PspXI | VCTCGAGB | 1 cut(s) | 2262 |
| PstI | CTGCAG | 1 cut(s) | 3787 |
| PstNI | CAGNNNCTG | 5 cut(s) | 4217, 4274, 4325, 4343, 4991 |
| PsuI | RGATCY | 8 cut(s) | 784, 1694, 2114, 2881, 3232, 3314, 4522, 4729 |
| PsyI | GACNNNGTC | 1 cut(s) | 2487 |
| PvuII | CAGCTG | 4 cut(s) | 3254, 4214, 4274, 4343 |
| RseI | CAYNNNNRTG | 5 cut(s) | 2781, 3008, 3357, 3480, 4764 |
| Rsr2I | CGGWCCG | 1 cut(s) | 387 |
| RsrII | CGGWCCG | 1 cut(s) | 387 |
| SacI | GAGCTC | 1 cut(s) | 449 |
| SapI | GCTCTTC | 1 cut(s) | 2608 |
| SchI | GAGTC | 6 cut(s) | 398, 932, 1760, 2639, 4246, 4841 |
| SduI | GDGCHC | 3 cut(s) | 449, 484, 2603 |
| SexAI | ACCWGGT | 1 cut(s) | 348 |
| SfcI | CTRYAG | 6 cut(s) | 1026, 1755, 3783, 4086, 4155, 4527 |
| Sfr274I | CTCGAG | 1 cut(s) | 2262 |
| SfuI | TTCGAA | 2 cut(s) | 1636, 3401 |
| SinI | GGWCC | 3 cut(s) | 346, 387, 3667 |
| SlaI | CTCGAG | 1 cut(s) | 2262 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 2781, 3008, 3357, 3480, 4764 |
| SmlI | CTYRAG | 7 cut(s) | 1206, 1358, 1552, 1667, 2262, 2458, 3200 |
| SmoI | CTYRAG | 7 cut(s) | 1206, 1358, 1552, 1667, 2262, 2458, 3200 |
| SspI | AATATT | 4 cut(s) | 1041, 2072, 3269, 3728 |
| SspMI | CTAG | 9 cut(s) | 1623, 1817, 1899, 2696, 2759, 3374, 3521, 4347, 4581 |
| SstI | GAGCTC | 1 cut(s) | 449 |
| StyI | CCWWGG | 2 cut(s) | 1332, 1407 |
| TaiI | ACGT | 6 cut(s) | 333, 487, 1159, 1264, 3002, 3012 |
| TatI | WGTACW | 3 cut(s) | 3040, 4327, 4965 |
| TauI | GCSGC | 5 cut(s) | 337, 340, 2330, 3433, 4411 |
| TseFI | GTSAC | 6 cut(s) | 94, 668, 2235, 3350, 4844, 4915 |
| Tsp45I | GTSAC | 6 cut(s) | 94, 668, 2235, 3350, 4844, 4915 |
| TspGWI | ACGGA | 3 cut(s) | 502, 2632, 4883 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2487 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 778, 2138 |
| Vha464I | CTTAAG | 2 cut(s) | 1358, 3200 |
| VneI | GTGCAC | 1 cut(s) | 480 |
| VpaK11BI | GGWCC | 3 cut(s) | 346, 387, 3667 |
| VspI | ATTAAT | 2 cut(s) | 2829, 3335 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3065 |
| XceI | RCATGY | 6 cut(s) | 192, 2281, 2594, 2970, 3047, 4487 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 995 |
| XhoI | CTCGAG | 1 cut(s) | 2262 |
| XmiI | GTMKAC | 1 cut(s) | 4287 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4098 |
| XspI | CTAG | 9 cut(s) | 1623, 1817, 1899, 2696, 2759, 3374, 3521, 4347, 4581 |
| Zsp2I | ATGCAT | 3 cut(s) | 823, 2166, 3334 |