Prupe.3G117800_v2.0.a1

Belongs to the endosulfine family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
10077154 .. 10080488
3335 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G117800.2

Sequence Viewer

Length: 324 bp
ATGGAGGATGGCAAAGAGCAGCGAGTGGATGAGTCTGAAAAATCATCGCCACAGGAGGAGGAAGCTATAAAGAAAAAATATGGTGGCATTATTCCCAAAAAACCACCACTAATTTCCAAGGACCATGAACGTGCTTACTTCGATTCTGCTGATTGGGCTCTTGGAAAGCAAGGTGTTGACAAGCCAAAAGGACCACTTGAAGCCCTTCGGCCAAAATTACAGCCCACACAGCAGCAAACACGATACAGAAAGTCTCCATGTGCTCCATCAGATGGTGAAGATGGAGGAAGTGCTCCTTCTGAGGATTCAGCTGCCAATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

11.77

Weight (kDa)

5.3

Isoelectric Point (pI)

55.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010750)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 272
AcoI YGGCCR 1 cut(s) 209
AfiI CCNNNNNNNGG 1 cut(s) 272
AgsI TTSAA 1 cut(s) 200
AluBI AGCT 2 cut(s) 65, 311
AluI AGCT 2 cut(s) 65, 311
Alw21I GWGCWC 2 cut(s) 265, 295
Alw26I GTCTC 1 cut(s) 258
AoxI GGCC 1 cut(s) 209
ApeKI GCWGC 3 cut(s) 19, 232, 311
Asp700I GAANNNNTTC 1 cut(s) 204
AspS9I GGNCC 2 cut(s) 121, 191
AsuHPI GGTGA 1 cut(s) 287
AvaII GGWCC 2 cut(s) 121, 191
BanII GRGCYC 1 cut(s) 160
Bbv12I GWGCWC 2 cut(s) 265, 295
BbvI GCAGC 3 cut(s) 31, 244, 298
BccI CCATC 4 cut(s) 2, 266, 274, 275
BcoDI GTCTC 1 cut(s) 258
BisI GCNGC 3 cut(s) 20, 233, 312
BlsI GCNGC 3 cut(s) 21, 234, 313
Bme18I GGWCC 2 cut(s) 121, 191
BmgT120I GGNCC 2 cut(s) 121, 191
BsaJI CCNNGG 1 cut(s) 117
Bsc4I CCNNNNNNNGG 1 cut(s) 272
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 2 cut(s) 13, 34
BseLI CCNNNNNNNGG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 291
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 3 cut(s) 31, 244, 298
BshFI GGCC 1 cut(s) 211
BsiHKAI GWGCWC 2 cut(s) 265, 295
BslI CCNNNNNNNGG 1 cut(s) 272
BsmAI GTCTC 1 cut(s) 258
BsnI GGCC 1 cut(s) 211
Bsp1286I GDGCHC 3 cut(s) 160, 265, 295
BspANI GGCC 1 cut(s) 211
BspCNI CTCAG 1 cut(s) 292
BssECI CCNNGG 1 cut(s) 117
BssT1I CCWWGG 1 cut(s) 117
BstDEI CTNAG 1 cut(s) 300
BstF5I GGATG 2 cut(s) 13, 34
BstMAI GTCTC 1 cut(s) 258
BstMWI GCNNNNNNNGC 2 cut(s) 155, 229
BstV1I GCAGC 3 cut(s) 31, 244, 298
BsuRI GGCC 1 cut(s) 211
BtgZI GCGATG 1 cut(s) 30
BtsCI GGATG 2 cut(s) 13, 34
Cfr13I GGNCC 2 cut(s) 121, 191
CviAII CATG 2 cut(s) 125, 258
CviJI RGCY 7 cut(s) 65, 158, 184, 203, 211, 223, 311
CviKI_1 RGCY 7 cut(s) 65, 158, 184, 203, 211, 223, 311
DdeI CTNAG 1 cut(s) 300
EaeI YGGCCR 1 cut(s) 209
Eco130I CCWWGG 1 cut(s) 117
Eco24I GRGCYC 1 cut(s) 160
Eco47I GGWCC 2 cut(s) 121, 191
EcoT14I CCWWGG 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 160
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 128, 261
FaiI YATR 4 cut(s) 68, 81, 126, 259
FalI AAGNNNNNCTT 4 cut(s) 180, 212, 280, 312
FatI CATG 2 cut(s) 124, 257
Fnu4HI GCNGC 3 cut(s) 20, 233, 312
FokI GGATG 2 cut(s) 20, 41
FriOI GRGCYC 1 cut(s) 160
Fsp4HI GCNGC 3 cut(s) 20, 233, 312
GluI GCNGC 3 cut(s) 20, 233, 312
HaeIII GGCC 1 cut(s) 211
Hin1II CATG 2 cut(s) 128, 261
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 3 cut(s) 32, 143, 305
HphI GGTGA 1 cut(s) 287
Hpy166II GTNNAC 1 cut(s) 178
Hpy188I TCNGA 3 cut(s) 37, 271, 301
Hpy8I GTNNAC 1 cut(s) 178
HpyAV CCTTC 2 cut(s) 215, 306
HpyCH4IV ACGT 1 cut(s) 130
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 229
HpyF3I CTNAG 1 cut(s) 300
HpySE526I ACGT 1 cut(s) 130
Hsp92II CATG 2 cut(s) 128, 261
LmnI GCTCC 2 cut(s) 268, 298
LpnPI CCDG 1 cut(s) 38
Lsp1109I GCAGC 3 cut(s) 31, 244, 298
MaeII ACGT 1 cut(s) 130
MboII GAAGA 1 cut(s) 290
MhlI GDGCHC 3 cut(s) 160, 265, 295
MluCI AATT 2 cut(s) 111, 215
MlyI GAGTC 1 cut(s) 41
MnlI CCTC 4 cut(s) 49, 52, 278, 295
MroXI GAANNNNTTC 1 cut(s) 204
MslI CAYNNNNRTG 1 cut(s) 129
MspA1I CMGCKG 1 cut(s) 311
MwoI GCNNNNNNNGC 2 cut(s) 155, 229
NlaIII CATG 2 cut(s) 128, 261
PdmI GAANNNNTTC 1 cut(s) 204
PfeI GAWTC 2 cut(s) 143, 305
PflMI CCANNNNNTGG 1 cut(s) 272
PkrI GCNGC 3 cut(s) 21, 234, 313
PleI GAGTC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 40
PspPI GGNCC 2 cut(s) 121, 191
PvuII CAGCTG 1 cut(s) 311
RseI CAYNNNNRTG 1 cut(s) 129
SatI GCNGC 3 cut(s) 20, 233, 312
Sau96I GGNCC 2 cut(s) 121, 191
SchI GAGTC 1 cut(s) 41
SduI GDGCHC 3 cut(s) 160, 265, 295
SetI ASST 4 cut(s) 67, 133, 175, 313
SinI GGWCC 2 cut(s) 121, 191
SmiMI CAYNNNNRTG 1 cut(s) 129
Sse9I AATT 2 cut(s) 111, 215
StyI CCWWGG 1 cut(s) 117
TaiI ACGT 1 cut(s) 133
TaqI TCGA 1 cut(s) 141
TasI AATT 2 cut(s) 111, 215
TfiI GAWTC 2 cut(s) 143, 305
TseI GCWGC 3 cut(s) 19, 232, 311
TspDTI ATGAA 1 cut(s) 141
Van91I CCANNNNNTGG 1 cut(s) 272
VpaK11BI GGWCC 2 cut(s) 121, 191
XmnI GAANNNNTTC 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.