Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0005640

Physical Location & Seq

Genomic Coordinates Forward (+)

20648649 .. 20655707

Gene Structure 7059 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G194900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3162 bp

ATGGCATCTCTGCTTCGCTGTCCCTGCTCCACTGAAGCACTGGAGGCTAGGCGGCTCATGGACGTTCCTGAAGCTCATGCTCGTCCTCGGCGCCACAACCATCTTCTCGCCCAACGAACCCACTTCTCCTCTTGGCCCGTGAGCCTGAGATTTCTATCGCCGTACATATGCCATCACATACCCCTCAGAAATGAATTCAGATTCACTCTTTGTATGGCGAAGCATAGTTCGTTCCTAAGATCCCCTATGATGTCCATGGAGAGAGGAAAGTCAAATGCTGTTGTTAAAGGAATGTGCAAGATAGTCTGGACTATAGAGGCTGATCTGGCAGCTGGTGAGTTTCTGTACATAACTGGGGATCCTACTATTCTTGGCTGCTGGGAACCGGAGATTGCTATACTAATGTCTCCTACAGAACATACGAACTTATGGAAGGCTGAAGTCAGGATTTCTGGTGGTGTAAATTTCAAGTATAACTATTTTATAAAGAGAGAAATGTGGCCTCCATCTGACATCATTTGGAGACCTGGACCTGAATTCTCTCTATCAGTACCCCTACCTGTCAAACAAGGTGGAAGAATTGGAGTGAGGGATTCATGGATGAGGCCCGATACCACAATGTCTCCAATTATTTCGTGGGGGTCATGGATAGAGGAGGCATATCTTCCAATACCACCTTTATTCTCAGCTCCAGCTAGAGATGAAGATGAGATTATGAAATACCTTAAAAGTGATATAATAGAACCAAAGCCAGTCTTAAATCTTCCTATGGAGAAGCGCATGTTATACTCTGATAGAGAACTTACTGCAAGTGCTACCCACAAGGGCTTCATTTCCAATACTGACATACTAGAGTTGAACCCATCTTTAAATGAACCTATGGAGGATAACGTGTACTCTGATGGCGACCGTATAGTGAATACCAGTCAGAGGGGGTTAATTTCTAATAGTTTTTCAACTGAAAGATATCATCCTATTGAGGAACCCTGGTTACTCCAATCACCTCTCTTCTTTCTTGTGTCCAACGATAAGATGGGTTCTGATATGTCCAAAAAGAATGGCGGCATGAAAGATTGTGTGGCAAATTTGGACAACACAGGACAATCGTTGCCTGAAGAAAGAAATAATCTAATTTCGAATGAACCTGTGTCTACCATTATACTGATTAATTCTTCTATATGTACCATGCAAAGGATAGCTCTACTGGAATATGGGAAATTGGTTGAGTTACTACTGGAACCCGTTAAAAGTACAGTCCAGTGTGATAGTGTGTATCTAGGGGTGGTTACAAAACTTGTCCCCCATATGGGTGGTGCATTTGTAAATATTGGGAGTTCTAGACCCTCACTAATGGACATTAAACAAAACAGAGAACCATTCATATTCCCGCCATTCCGTAGGACAAAGAAAATGGAAGCCAATGGTTATATGCTTGATGATCGCGTGAATGCATATGGAAATGAACGCATGCCACTTGATTACGAAGTGACTGACGACATCATTGAAATCAACTCTCAGGATGATTTTGTAAAATCCATTTACGATGTTGATGATGATGATGATGATGATGAACATGAAATTGAGGATGAATTTGATGTTTCATATGTTAAGGAAAACGTGAATGGTAGTATGCTCGACACTGGTGATGTGGGAAATGATTATCTAAAAGGTGACACCAGTGCTATTCCTGTTGCCATAAATGGTTCTAGCAGTTCTCAAATGTCTCACCTCCAAAATAAGAAGAATGATGCAAATATTATCGCTAATGAGAAAAAGTGGGCTCGAGTTCAGAAAGGCACCAAAGTTCTTGTACAAGTTGTCAAAGAGGGGTTGGGTTCAAAAGGTCCCACACTGACTGCTTATCCAAAATTGAAAAGCAGATTCTGGATATTATTAACTCGTTGTGATAGAATTGGAATCTCCAAAAAAATTGGCGGTGTTGAGCGTACACGATTAAAAGTCATAGCAAAAACTTTGCAGCCTCTGGGTTTTGGTTTGACTGTAAGGACTGTTGCTGCTGGCCATTCTTTAGAGGAGCTGCAAAAGGATTTGGAAGGTCTAGTTTCAACTTGGAAAAGTATTACGGAACATGCAAAATCTGCAGCACTTGCTGCAGATGAAGGTGTGGCAGGGACCATTCCTGTTATTCTACACCGGGCAATGGGTCAGACGCTTTCAGTTGTCCAGGATTATTTTAATGAGACGGTTGAGAAAATGGTTGTTGACTCTCCAAGGACATATCATGAGGTTACCAGTTACCTTCAGGAGATTGCCCCTGATCTTTGTGATCGAGTTGAGTTGTACAACAAAAGAATTCCTCTTTTTGATGAATTTAACATCGAAGAAGAGATCAACAACATGCTTAGTAAAAGGGTTCCACTTGCTAAGGGAGGCTCTTTAGTGATCGAGCAAACTGAGGCACTAGTCTCTGTCGATGTGAATGGAGGACATGGGATGTTTGGTCAAGGGACTTCACAGGAGAAAGCTATTTTAGAAGTCAACCTTGCAGCTGCTAAACAAATTGCAAGGGAGTTACGACTGAGAGATATCGGTGGCATAATTGTGGTAGATTTCATTGATATGGCTGATGAATCAAATAAGAGATTGGTCTATGAAGAAGCTAAGAAGGCTGTTGAGAGAGATAGATCAATGGTTAAAGTCTCTGAACTTTCGAGGCATGGACTTATGGAAATAACAAGAAAGCGAGTACGACCTAGTGTGACATTTATGATTAGTGAACCATGCACCTGCTGCCATGCCACTGGAAGAGTAGAAGCATTGGAGACCTCCTTCTCCAAAATTGAACAAGAAATTTCTCGATTACTGGCGATGATGGAACAGAGACCAGACCCAGAGAACCCTAAATCCTGGCCAAAATTTATTCTGAGAATTGACCATCACATGTGTGACTACTTAACTTCTGGGAAAAGGACAAAACTTGCATTCTTGAGCAGTTCCCTCAAAGTTTGGATTCTACTAAAGGTTGCTAGAGGTTTCACCAGGGGTGCATTTGAAGTGAAACCATTTACAGATGAAAAGGCACACAAAGATCAGCGGCAAGTAACCATTCCGATGTTACGGCCTACAGAAACCAGAACTAACAATCCTGGCAGAAAAGTGACCTTGTTTCCAGTCAAAAAGTGGAAGGCCGGTGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010239 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0031425 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901259 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_20 RNase_E_G

Protein Analysis

1054

Amino Acids

118.76

Weight (kDa)

6.42

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005640)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270
fragaria_vesca	FvH4_6g40410
malus_domestica	MD09G1130200.v1.1 MD17G1105400.v1.1
prunus_persica	Prupe.3G194900_v2.0.a1 Prupe.3G194900_v2.0.a1
pyrus_communis	pycom09g05330 pycom17g10950 pycom17g10970
rosa_chinensis	RchiOBHm_Chr2g0155641
rosa_laevigata	RLG00000020850
rosa_multiflora	Rmu_ssc0000430.1_g000006
rosa_roxburghii	Rroxscaffold_2G00093600
rosa_rugosa	Rorug02G0448700 Rorug02G0448700
rosa_samantha	Rh2AG514800 Rh2BG525700 Rh2CG499700 Rh2DG534600
rosa_wichuraiana	Rw2G042300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	485
AarI	CACCTGC	1 cut(s)	2756
Acc36I	ACCTGC	1 cut(s)	2756
AccB1I	GGYRCC	2 cut(s)	90, 1796
AccI	GTMKAC	1 cut(s)	1151
AccII	CGCG	1 cut(s)	1443
AciI	CCGC	5 cut(s)	52, 1062, 1388, 1935, 3055
AclWI	GGATC	3 cut(s)	234, 353, 366
AcoI	YGGCCR	2 cut(s)	2020, 2870
AcsI	RAATTY	9 cut(s)	194, 463, 536, 1084, 1589, 2313, 2330, 2811, 2876
AcuI	CTGAAG	5 cut(s)	54, 90, 459, 1134, 2246
AcyI	GRCGYC	1 cut(s)	91
AfiI	CCNNNNNNNGG	5 cut(s)	930, 1191, 1306, 1307, 2161
AflIII	ACRYGT	2 cut(s)	891, 2901
AgsI	TTSAA	9 cut(s)	469, 859, 957, 1505, 1839, 1873, 2067, 2804, 3014
AhlI	ACTAGT	1 cut(s)	2422
AjnI	CCWGG	6 cut(s)	526, 986, 2184, 2867, 2999, 3106
AleI	CACNNNNGTG	1 cut(s)	2904
AloI	GAACNNNNNNTCC	4 cut(s)	2849, 2881, 3088, 3120
AluBI	AGCT	9 cut(s)	74, 332, 689, 695, 1199, 2038, 2486, 2510, 2621
AluI	AGCT	9 cut(s)	74, 332, 689, 695, 1199, 2038, 2486, 2510, 2621
Alw26I	GTCTC	9 cut(s)	411, 517, 627, 1728, 2195, 2431, 2665, 2777, 2836
AlwI	GGATC	3 cut(s)	234, 353, 366
AlwNI	CAGNNNCTG	2 cut(s)	1884, 1984
Ama87I	CYCGRG	1 cut(s)	1782
AoxI	GGCC	7 cut(s)	134, 500, 605, 2020, 2870, 3080, 3147
ApoI	RAATTY	9 cut(s)	194, 463, 536, 1084, 1589, 2313, 2330, 2811, 2876
AseI	ATTAAT	1 cut(s)	1167
AspLEI	GCGC	2 cut(s)	93, 780
AspS9I	GGNCC	5 cut(s)	135, 530, 606, 1844, 2133
AsuC2I	CCSGG	1 cut(s)	2156
AsuHPI	GGTGA	6 cut(s)	347, 993, 1655, 1682, 1718, 2989
AsuII	TTCGAA	1 cut(s)	1136
AvaI	CYCGRG	1 cut(s)	1782
AvaII	GGWCC	3 cut(s)	530, 1844, 2133
BalI	TGGCCA	2 cut(s)	2022, 2872
BamHI	GGATCC	1 cut(s)	358
BanI	GGYRCC	2 cut(s)	90, 1796
BanII	GRGCYC	1 cut(s)	1783
BccI	CCATC	8 cut(s)	108, 180, 514, 871, 896, 1027, 2827, 2904
BceAI	ACGGC	2 cut(s)	145, 3095
BciT130I	CCWGG	6 cut(s)	528, 988, 2186, 2869, 3001, 3108
BcnI	CCSGG	1 cut(s)	2156
BcoDI	GTCTC	9 cut(s)	411, 517, 627, 1728, 2195, 2431, 2665, 2777, 2836
BcuI	ACTAGT	1 cut(s)	2422
BfmI	CTRYAG	5 cut(s)	312, 411, 2100, 2112, 3084
BfoI	RGCGCY	1 cut(s)	94
BfuAI	ACCTGC	1 cut(s)	2756
Bme1390I	CCNGG	7 cut(s)	528, 988, 2156, 2186, 2869, 3001, 3108
Bme18I	GGWCC	3 cut(s)	530, 1844, 2133
BmeT110I	CYCGRG	1 cut(s)	1782
BmgT120I	GGNCC	5 cut(s)	135, 530, 606, 1844, 2133
BmiI	GGNNCC	9 cut(s)	92, 360, 384, 984, 1239, 1798, 1846, 2134, 2376
BmrFI	CCNGG	7 cut(s)	528, 988, 2156, 2186, 2869, 3001, 3108
BmrI	ACTGGG	1 cut(s)	363
BmsI	GCATC	2 cut(s)	14, 1738
BmuI	ACTGGG	1 cut(s)	363
BpmI	CTGGAG	2 cut(s)	62, 675
Bpu10I	CCTNAGC	1 cut(s)	2385
Bpu14I	TTCGAA	1 cut(s)	1136
BpuEI	CTTGAG	1 cut(s)	2968
BpuMI	CCSGG	1 cut(s)	2156
BsaBI	GATNNNNATC	1 cut(s)	154
BsaHI	GRCGYC	1 cut(s)	91
BsaI	GGTCTC	3 cut(s)	517, 2777, 2836
BsaJI	CCNNGG	5 cut(s)	86, 255, 986, 2231, 3000
BsaWI	WCCGGW	1 cut(s)	385
BsaXI	ACNNNNNCTCC	2 cut(s)	607, 637
Bsc4I	CCNNNNNNNGG	5 cut(s)	930, 1191, 1306, 1307, 2161
Bse118I	RCCGGY	1 cut(s)	3149
Bse3DI	GCAATG	1 cut(s)	2166
Bse8I	GATNNNNATC	1 cut(s)	154
BseBI	CCWGG	6 cut(s)	528, 988, 2186, 2869, 3001, 3108
BseDI	CCNNGG	5 cut(s)	86, 255, 986, 2231, 3000
BseGI	GGATG	5 cut(s)	606, 970, 1525, 1591, 2460
BseJI	GATNNNNATC	1 cut(s)	154
BseLI	CCNNNNNNNGG	5 cut(s)	930, 1191, 1306, 1307, 2161
BseMI	GCAATG	1 cut(s)	2166
BseMII	CTCAG	7 cut(s)	137, 199, 699, 1529, 2406, 2531, 2876
BseRI	GAGGAG	3 cut(s)	118, 668, 2048
BseYI	CCCAGC	1 cut(s)	378
Bsh1236I	CGCG	1 cut(s)	1443
Bsh1285I	CGRYCG	1 cut(s)	910
BshFI	GGCC	7 cut(s)	136, 502, 607, 2022, 2872, 3082, 3149
BshNI	GGYRCC	2 cut(s)	90, 1796
BsiEI	CGRYCG	1 cut(s)	910
BsiHKCI	CYCGRG	1 cut(s)	1782
BsiSI	CCGG	3 cut(s)	386, 2155, 3150
BslFI	GGGAC	5 cut(s)	6, 1283, 1830, 2146, 2482
BslI	CCNNNNNNNGG	5 cut(s)	930, 1191, 1306, 1307, 2161
BsmAI	GTCTC	9 cut(s)	411, 517, 627, 1728, 2195, 2431, 2665, 2777, 2836
BsmBI	CGTCTC	1 cut(s)	2195
BsmFI	GGGAC	5 cut(s)	6, 1283, 1830, 2146, 2482
BsmI	GAATGC	2 cut(s)	1453, 2942
BsnI	GGCC	7 cut(s)	136, 502, 607, 2022, 2872, 3082, 3149
Bso31I	GGTCTC	3 cut(s)	517, 2777, 2836
BsoBI	CYCGRG	1 cut(s)	1782
Bsp119I	TTCGAA	1 cut(s)	1136
Bsp1286I	GDGCHC	1 cut(s)	1783
Bsp1407I	TGTACA	3 cut(s)	345, 1810, 2301
Bsp19I	CCATGG	1 cut(s)	255
BspACI	CCGC	5 cut(s)	52, 1062, 1388, 1935, 3055
BspANI	GGCC	7 cut(s)	136, 502, 607, 2022, 2872, 3082, 3149
BspCNI	CTCAG	7 cut(s)	138, 198, 698, 1528, 2407, 2532, 2877
BspFNI	CGCG	1 cut(s)	1443
BspHI	TCATGA	1 cut(s)	2242
BspLI	GGNNCC	9 cut(s)	92, 360, 384, 984, 1239, 1798, 1846, 2134, 2376
BspMAI	CTGCAG	2 cut(s)	2104, 2116
BspMI	ACCTGC	1 cut(s)	2756
BspPI	GGATC	3 cut(s)	234, 353, 366
BspT104I	TTCGAA	1 cut(s)	1136
BspT107I	GGYRCC	2 cut(s)	90, 1796
BspTNI	GGTCTC	3 cut(s)	517, 2777, 2836
BsrDI	GCAATG	1 cut(s)	2166
BsrFI	RCCGGY	1 cut(s)	3149
BsrGI	TGTACA	3 cut(s)	345, 1810, 2301
BssAI	RCCGGY	1 cut(s)	3149
BssECI	CCNNGG	5 cut(s)	86, 255, 986, 2231, 3000
BssNI	GRCGYC	1 cut(s)	91
BssT1I	CCWWGG	2 cut(s)	255, 2231
Bst2UI	CCWGG	6 cut(s)	528, 988, 2186, 2869, 3001, 3108
Bst4CI	ACNGT	5 cut(s)	911, 1255, 2002, 2011, 2206
Bst6I	CTCTTC	3 cut(s)	1013, 2340, 2761
BstACI	GRCGYC	1 cut(s)	91
BstAPI	GCANNNNNTGC	4 cut(s)	2099, 2108, 2111, 2751
BstAUI	TGTACA	3 cut(s)	345, 1810, 2301
BstBI	TTCGAA	1 cut(s)	1136
BstC8I	GCNNGC	2 cut(s)	1469, 2020
BstDSI	CCRYGG	1 cut(s)	255
BstEII	GGTNACC	1 cut(s)	2248
BstF5I	GGATG	5 cut(s)	606, 970, 1525, 1591, 2460
BstFNI	CGCG	1 cut(s)	1443
BstH2I	RGCGCY	1 cut(s)	94
BstHHI	GCGC	2 cut(s)	93, 780
BstMAI	GTCTC	9 cut(s)	411, 517, 627, 1728, 2195, 2431, 2665, 2777, 2836
BstMCI	CGRYCG	1 cut(s)	910
BstMWI	GCNNNNNNNGC	8 cut(s)	24, 44, 326, 2099, 2108, 2111, 2627, 2751
BstNI	CCWGG	6 cut(s)	528, 988, 2186, 2869, 3001, 3108
BstNSI	RCATGY	5 cut(s)	784, 1471, 2093, 2362, 2905
BstPI	GGTNACC	1 cut(s)	2248
BstSCI	CCNGG	7 cut(s)	526, 986, 2154, 2184, 2867, 2999, 3106
BstSFI	CTRYAG	5 cut(s)	312, 411, 2100, 2112, 3084
BstUI	CGCG	1 cut(s)	1443
BstX2I	RGATCY	2 cut(s)	239, 358
BstXI	CCANNNNNNTGG	2 cut(s)	1310, 2762
BstYI	RGATCY	2 cut(s)	239, 358
BsuRI	GGCC	7 cut(s)	136, 502, 607, 2022, 2872, 3082, 3149
BtgI	CCRYGG	1 cut(s)	255
BtgZI	GCGATG	1 cut(s)	2843
BtsCI	GGATG	5 cut(s)	606, 970, 1525, 1591, 2460
BtsIMutI	CAGTG	7 cut(s)	30, 38, 1265, 1638, 1684, 1850, 2760
BveI	ACCTGC	1 cut(s)	2756
Cac8I	GCNNGC	2 cut(s)	1469, 2020
CaiI	CAGNNNCTG	2 cut(s)	1884, 1984
CciI	TCATGA	1 cut(s)	2242
CfoI	GCGC	2 cut(s)	93, 780
Cfr10I	RCCGGY	1 cut(s)	3149
Cfr13I	GGNCC	5 cut(s)	135, 530, 606, 1844, 2133
CseI	GACGC	1 cut(s)	2179
CspCI	CAANNNNNGTGG	2 cut(s)	553, 588
DinI	GGCGCC	1 cut(s)	92
DraI	TTTAAA	1 cut(s)	870
EaeI	YGGCCR	2 cut(s)	2020, 2870
Eam1104I	CTCTTC	3 cut(s)	1013, 2340, 2761
EarI	CTCTTC	3 cut(s)	1013, 2340, 2761
Eco130I	CCWWGG	2 cut(s)	255, 2231
Eco24I	GRGCYC	1 cut(s)	1783
Eco31I	GGTCTC	3 cut(s)	517, 2777, 2836
Eco32I	GATATC	2 cut(s)	968, 2548
Eco47I	GGWCC	3 cut(s)	530, 1844, 2133
Eco57I	CTGAAG	5 cut(s)	54, 90, 459, 1134, 2246
Eco88I	CYCGRG	1 cut(s)	1782
Eco91I	GGTNACC	1 cut(s)	2248
EcoO109I	RGGNCCY	1 cut(s)	1844
EcoO65I	GGTNACC	1 cut(s)	2248
EcoRI	GAATTC	3 cut(s)	194, 536, 2313
EcoRII	CCWGG	6 cut(s)	526, 986, 2184, 2867, 2999, 3106
EcoRV	GATATC	2 cut(s)	968, 2548
EcoT14I	CCWWGG	2 cut(s)	255, 2231
EcoT22I	ATGCAT	1 cut(s)	1453
EcoT38I	GRGCYC	1 cut(s)	1783
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	255, 2231
Esp3I	CGTCTC	1 cut(s)	2195
FalI	AAGNNNNNCTT	4 cut(s)	740, 772, 2487, 2519
FaqI	GGGAC	5 cut(s)	6, 1283, 1830, 2146, 2482
FauI	CCCGC	1 cut(s)	1395
FauNDI	CATATG	4 cut(s)	167, 1305, 1453, 1603
FblI	GTMKAC	1 cut(s)	1151
FokI	GGATG	5 cut(s)	613, 957, 1532, 1598, 2467
FriOI	GRGCYC	1 cut(s)	1783
GlaI	GCGC	2 cut(s)	92, 779
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	2 cut(s)	62, 675
HaeII	RGCGCY	1 cut(s)	94
HaeIII	GGCC	7 cut(s)	136, 502, 607, 2022, 2872, 3082, 3149
HapII	CCGG	3 cut(s)	386, 2155, 3150
HgaI	GACGC	1 cut(s)	2179
HhaI	GCGC	2 cut(s)	93, 780
Hin1I	GRCGYC	1 cut(s)	91
Hin6I	GCGC	2 cut(s)	91, 778
HinP1I	GCGC	2 cut(s)	91, 778
HincII	GTYRAC	2 cut(s)	2224, 2500
HindII	GTYRAC	2 cut(s)	2224, 2500
HinfI	GANTC	7 cut(s)	201, 593, 1881, 1917, 2225, 2591, 2971
HpaII	CCGG	3 cut(s)	386, 2155, 3150
HphI	GGTGA	6 cut(s)	347, 993, 1655, 1682, 1718, 2989
Hpy166II	GTNNAC	6 cut(s)	895, 1152, 1949, 2224, 2500, 2738
Hpy8I	GTNNAC	6 cut(s)	895, 1152, 1949, 2224, 2500, 2738
HpyAV	CCTTC	7 cut(s)	427, 2048, 2114, 2270, 2620, 2800, 3139
HpyCH4III	ACNGT	5 cut(s)	911, 1255, 2002, 2011, 2206
HpyCH4IV	ACGT	3 cut(s)	63, 891, 1617
HpyF10VI	GCNNNNNNNGC	8 cut(s)	24, 44, 326, 2099, 2108, 2111, 2627, 2751
HpySE526I	ACGT	3 cut(s)	63, 891, 1617
Hsp92I	GRCGYC	1 cut(s)	91
HspAI	GCGC	2 cut(s)	91, 778
KasI	GGCGCC	1 cut(s)	90
LmnI	GCTCC	3 cut(s)	32, 694, 2035
LweI	GCATC	2 cut(s)	14, 1738
MaeII	ACGT	3 cut(s)	63, 891, 1617
MflI	RGATCY	2 cut(s)	239, 358
MhlI	GDGCHC	1 cut(s)	1783
MlsI	TGGCCA	2 cut(s)	2022, 2872
MluNI	TGGCCA	2 cut(s)	2022, 2872
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	1 cut(s)	2219
MmeI	TCCRAC	1 cut(s)	1047
Mox20I	TGGCCA	2 cut(s)	2022, 2872
Mph1103I	ATGCAT	1 cut(s)	1453
MscI	TGGCCA	2 cut(s)	2022, 2872
MslI	CAYNNNNRTG	5 cut(s)	1308, 2561, 2579, 2904, 3071
Msp20I	TGGCCA	2 cut(s)	2022, 2872
MspA1I	CMGCKG	3 cut(s)	332, 2510, 3055
MspI	CCGG	3 cut(s)	386, 2155, 3150
MspR9I	CCNGG	7 cut(s)	528, 988, 2156, 2186, 2869, 3001, 3108
Mva1269I	GAATGC	2 cut(s)	1453, 2942
MvaI	CCWGG	6 cut(s)	528, 988, 2186, 2869, 3001, 3108
MvnI	CGCG	1 cut(s)	1443
MwoI	GCNNNNNNNGC	8 cut(s)	24, 44, 326, 2099, 2108, 2111, 2627, 2751
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	1 cut(s)	2156
NcoI	CCATGG	1 cut(s)	255
NdeI	CATATG	4 cut(s)	167, 1305, 1453, 1603
NlaIV	GGNNCC	9 cut(s)	92, 360, 384, 984, 1239, 1798, 1846, 2134, 2376
NmeAIII	GCCGAG	1 cut(s)	67
NmuCI	GTSAC	5 cut(s)	1486, 1670, 2719, 2906, 3118
NsiI	ATGCAT	1 cut(s)	1453
NspI	RCATGY	5 cut(s)	784, 1471, 2093, 2362, 2905
NspV	TTCGAA	1 cut(s)	1136
OliI	CACNNNNGTG	1 cut(s)	2904
PaeI	GCATGC	1 cut(s)	1471
PaeR7I	CTCGAG	1 cut(s)	1782
PagI	TCATGA	1 cut(s)	2242
PaqCI	CACCTGC	1 cut(s)	2756
PciI	ACATGT	1 cut(s)	2901
PctI	GAATGC	2 cut(s)	1453, 2942
PfeI	GAWTC	6 cut(s)	201, 593, 1881, 1917, 2591, 2971
PfoI	TCCNGGA	1 cut(s)	2184
PleI	GAGTC	1 cut(s)	2219
PluTI	GGCGCC	1 cut(s)	94
PpsI	GAGTC	1 cut(s)	2219
PpuMI	RGGWCCY	1 cut(s)	1844
PscI	ACATGT	1 cut(s)	2901
PshBI	ATTAAT	1 cut(s)	1167
PsiI	TTATAA	1 cut(s)	485
Psp5II	RGGWCCY	1 cut(s)	1844
Psp6I	CCWGG	6 cut(s)	526, 986, 2184, 2867, 2999, 3106
PspEI	GGTNACC	1 cut(s)	2248
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	6 cut(s)	526, 986, 2184, 2867, 2999, 3106
PspN4I	GGNNCC	9 cut(s)	92, 360, 384, 984, 1239, 1798, 1846, 2134, 2376
PspPI	GGNCC	5 cut(s)	135, 530, 606, 1844, 2133
PspPPI	RGGWCCY	1 cut(s)	1844
PspXI	VCTCGAGB	1 cut(s)	1782
PsrI	GAACNNNNNNTAC	2 cut(s)	975, 1007
PstI	CTGCAG	2 cut(s)	2104, 2116
PstNI	CAGNNNCTG	2 cut(s)	1884, 1984
PsuI	RGATCY	2 cut(s)	239, 358
PvuII	CAGCTG	2 cut(s)	332, 2510
RseI	CAYNNNNRTG	5 cut(s)	1308, 2561, 2579, 2904, 3071
Sau96I	GGNCC	5 cut(s)	135, 530, 606, 1844, 2133
SchI	GAGTC	1 cut(s)	2219
ScrFI	CCNGG	7 cut(s)	528, 988, 2156, 2186, 2869, 3001, 3108
SduI	GDGCHC	1 cut(s)	1783
SfaNI	GCATC	2 cut(s)	14, 1738
SfcI	CTRYAG	5 cut(s)	312, 411, 2100, 2112, 3084
SfoI	GGCGCC	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	1782
SfuI	TTCGAA	1 cut(s)	1136
SinI	GGWCC	3 cut(s)	530, 1844, 2133
SlaI	CTCGAG	1 cut(s)	1782
SmiMI	CAYNNNNRTG	5 cut(s)	1308, 2561, 2579, 2904, 3071
SmlI	CTYRAG	2 cut(s)	1782, 2947
SmoI	CTYRAG	2 cut(s)	1782, 2947
SpeI	ACTAGT	1 cut(s)	2422
SphI	GCATGC	1 cut(s)	1471
SsiI	CCGC	5 cut(s)	52, 1062, 1388, 1935, 3055
SspDI	GGCGCC	1 cut(s)	90
SspI	AATATT	2 cut(s)	1327, 1756
StyD4I	CCNGG	7 cut(s)	526, 986, 2154, 2184, 2867, 2999, 3106
StyI	CCWWGG	2 cut(s)	255, 2231
TaaI	ACNGT	5 cut(s)	911, 1255, 2002, 2011, 2206
TaiI	ACGT	3 cut(s)	66, 894, 1620
TaqI	TCGA	9 cut(s)	1136, 1635, 1783, 2290, 2340, 2406, 2433, 2672, 2818
TatI	WGTACW	5 cut(s)	345, 894, 1250, 1810, 2301
TauI	GCSGC	3 cut(s)	55, 1065, 3058
TfiI	GAWTC	6 cut(s)	201, 593, 1881, 1917, 2591, 2971
TscAI	CASTG	7 cut(s)	37, 45, 1265, 1645, 1684, 1857, 2767
TseFI	GTSAC	5 cut(s)	1486, 1670, 2719, 2906, 3118
Tsp45I	GTSAC	5 cut(s)	1486, 1670, 2719, 2906, 3118
TspGWI	ACGGA	2 cut(s)	1385, 2099
TspRI	CASTG	7 cut(s)	37, 45, 1265, 1645, 1684, 1857, 2767
VpaK11BI	GGWCC	3 cut(s)	530, 1844, 2133
VspI	ATTAAT	1 cut(s)	1167
XapI	RAATTY	9 cut(s)	194, 463, 536, 1084, 1589, 2313, 2330, 2811, 2876
XbaI	TCTAGA	1 cut(s)	1337
XceI	RCATGY	5 cut(s)	784, 1471, 2093, 2362, 2905
XcmI	CCANNNNNNNNNTGG	4 cut(s)	37, 633, 1030, 3138
XhoI	CTCGAG	1 cut(s)	1782
XmiI	GTMKAC	1 cut(s)	1151
Zsp2I	ATGCAT	1 cut(s)	1453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.