Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005640

Physical Location & Seq

Genomic Coordinates Forward (+)

76487841 .. 76496276

Gene Structure 8436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG534600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGGAGGCCGGGCGGCTCATGGACATTCCCGAACCTCATACTTGTCCTCGGCGCCACCGCACCCTCTTCTCCTCTTCCTCTTGCCTCCCTCCTTCGCTTAGCGTCAGGTTTCTATCGCCGTACATATACCATCACATACCCCTTGGAAATGTGTTCAGATTTTCTCTTTGTACAGCAAAGCAATGCTCTTTGCAAAGAGCTCCTATAAAGTCCATGGAGAAAGGCAAGTCAAATACTTCTCTTAAAGGAATGTGCAATATAGTTTGGACAATCGAGGCTGATCTGGAAGCTGGTCAGTTTTTGTACGTCACTGGGGACCTTTCAGCTCTCGGCTCCTGGGAACCAGAGAACGCTATACTAATGTCTCATGCAGAACATACAAACTTATGGAAGGCTAAACTCGAGATTGCTGGTGGTGTAAATTTCAAGTATAACTATTTCATAAAGAGAGAAGTATGGCCTTCATGTGACATTATTTGGAGACCTGGACCTGAATTCTCTTTGTCAGTACCCCGACCTGTCAACGGTGGAAAACTCGTGGTGAGGGACTCATGGATGAGGACTACGATGTCTCCTATTCATCCATGGGGCTCATTGATAGAAGAGACATATTTTCCAATACAGCCTTTATTCTCAGCTCCAGCTACAGATGAGGATGAGATTATGAAATACCTTAGAAGTGATATGTTAGAGTCACTGCCCGTCTTAAGTATTCCCATGAAGAAGGGAATGTTAGACTCCGATAGTGAACTTACAGCAAATTCTACACAGAAGGGCTTTATTTCTCATAGTGACATAATAGACCCATTGTTAAGTGATCTTAGGAAGGATAGTGCGTACTCTGATGGTGACCTTGCAGTGAATCCTAGTCAGAGGGTTTCAATTTCTAATAGCTTCTCAACGGAAAGATATCAACCTGTTGAGGAGCCCTGGTTAGTCGAACCACCTCCCTTCTTTCTTGTATCCAAGGATATGAGGGGGTCTGATATGTCAGACAATGGCAACATAGAAGATGGCATTACAAATTTGGATGATACAGGAAACTCTTTGCCTGAAGAAAGCAATAACCTAATTCCCAGGGAACCTGTTTCTACCATTATACTGATTAACTCTTCTATATGTACCATGCAAAGGATAGCTCTACTGGAATATGGGAAACTGGTTGAGCTACTATTGGAACCTGTTAAAAGTACTGTGCAGTGTGATAGCGTTTATCTAGGGGTGGTTACAAAACTTGTCCCCCATATGGGTGGGGCATTTGTAAATATAGGGAATTCTAGACCATCTCTAATGGACATCAAACACAACAGGGAGCCTTTTATATTCCCTCCATTCCGAAGGACAAAGAAAATGGAAGCCAACAGTCATATGTTCGAAGAACACATGACTGCAGATGAAAATGAACGCATGTCGCTTGATTTCGAAGTGACTGATGACATCATGGAAATTAGCTCTCAGGACGATTTTGTAAAATCAATGCACAGTGACGATGAGGAGCATGAAATTGAGGATGCATTTGATCTCTCAGATGTTAAGGAACACATGAATGGTAGCATACTTGATTATGGCAAAGTAGAAGCTGATTATCCAGAAGGTGAAACTAGTGCCATTCCTGTTGCCATCAATGGTTCTAGCAATTCTCAAATGTCTCACCCCCAAAATAAGAAGAATGGTGCAAATACTGTCACTCATGAAAATAAGTGGGCCCGAGTTCAGAAGGGCACTAAAGTTGTTGTACAAGTTGTCAAAGAGGGGCTGGGTTCAAAAGGACCCACACTGACTGCTTATCCAAAATTAAAGAGCAGATTCTGGATATTGATAACTCGTTGTGATAGAATAGGAATCTCCAAGAAAATCAGTGGTATTGAGCGTACACGATTGAAAGTCATTGCAAAAACTTTGCAGCCTCCAGGTTTTGGTCTGACTGTAAGGACTGTTGCTGCTGGCCATTCTTTAGAGGAACTGCAAAAAGATCTGGAAGGTTTGGTTTTAACTTGGAAGAATATCACGGAGCATGCAAAATCTGCAGCTCTTGCTGCAGATGAAGGTGTGGAAGGAGCCGTTCCTGTTATTCTGCATTGTGCAATGGGTCAGACACTCTCAGTTGTGCAGGATTATTTTAATGAGACGGTTGAGAAAATGGTAGTTGACTCTCCAAGGACATATCACGAGGTTACCAATTACCTTCAGGAGATTGCCCCTGATCTTTGTGATCGAGTTGAGCTATACAGTAAAAGAATCCCTCTTTTTGATGAATTCAACATTGAAGAAGAGATCAACAATATGCTCAGTAAAAGGGTTCCACTTGCTAATGGAGGTTCTCTAGTGATTGAGCAAACTGAGGCATTAGTATCTGTTGATGTGAATGGGGGTCATGGGATGTTTGGTCAAGGAACCTCACAGGAGAAAGCTATTCTGGAAGTCAACCTTGCAGCTGCCAAACAGATTGCAAGGGAGTTACGACTGAGAGATATTGGGGGCATAATTGTGGTAGATTTCATTGATATGGCCGATGAATGTAAGTCAAAGTTTCTTTCTTTTGTGTGTGCAAATGTGCATGCTTCACATATGCACATATTTTTGCACATCCATGGGACTAATTGTGTACTTAGTTGCTTACTGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010239 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0031425 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901259 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_20 RNase_E_G

Protein Analysis

875

Amino Acids

97.57

Weight (kDa)

5.32

Isoelectric Point (pI)

48.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_20	PF00686	86 - 173	3.3e-14	Starch binding domain
RNase_E_G	PF10150	599 - 842	3.2e-71	Ribonuclease E/G family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005640)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270 AT2G04270
fragaria_vesca	FvH4_6g40410
malus_domestica	MD09G1130200.v1.1 MD17G1105400.v1.1
prunus_persica	Prupe.3G194900_v2.0.a1 Prupe.3G194900_v2.0.a1
pyrus_communis	pycom09g05330 pycom17g10950 pycom17g10970
rosa_chinensis	RchiOBHm_Chr2g0155641
rosa_laevigata	RLG00000020850
rosa_multiflora	Rmu_ssc0000430.1_g000006
rosa_roxburghii	Rroxscaffold_2G00093600
rosa_rugosa	Rorug02G0448700 Rorug02G0448700
rosa_samantha	Rh2AG514800 Rh2BG525700 Rh2CG499700 Rh2DG534600
rosa_wichuraiana	Rw2G042300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	568
AccB1I	GGYRCC	1 cut(s)	51
AccB7I	CCANNNNNTGG	1 cut(s)	1916
AciI	CCGC	2 cut(s)	13, 58
AcoI	YGGCCR	2 cut(s)	1945, 2508
AcsI	RAATTY	6 cut(s)	421, 494, 760, 1024, 1273, 2255
AcuI	CTGAAG	2 cut(s)	1074, 2171
AcyI	GRCGYC	1 cut(s)	52
AfiI	CCNNNNNNNGG	5 cut(s)	524, 1131, 1246, 1247, 1916
AflII	CTTAAG	1 cut(s)	706
AgsI	TTSAA	6 cut(s)	427, 882, 1764, 1882, 2260, 2267
AhlI	ACTAGT	1 cut(s)	1601
AjnI	CCWGG	5 cut(s)	335, 484, 929, 1076, 1909
Alw21I	GWGCWC	1 cut(s)	202
Alw26I	GTCTC	6 cut(s)	369, 475, 576, 599, 1653, 2120
AlwNI	CAGNNNCTG	1 cut(s)	1809
Ama87I	CYCGRG	2 cut(s)	401, 1707
AoxI	GGCC	5 cut(s)	6, 458, 1704, 1945, 2508
ApaI	GGGCCC	1 cut(s)	1708
ApeKI	GCWGC	6 cut(s)	1903, 1940, 2027, 2036, 2432, 2435
ApoI	RAATTY	6 cut(s)	421, 494, 760, 1024, 1273, 2255
AspLEI	GCGC	1 cut(s)	54
AspS9I	GGNCC	5 cut(s)	316, 488, 1704, 1705, 1769
AsuC2I	CCSGG	1 cut(s)	10
AsuHPI	GGTGA	4 cut(s)	553, 860, 1607, 1643
AsuII	TTCGAA	2 cut(s)	1374, 1422
AvaI	CYCGRG	2 cut(s)	401, 1707
AvaII	GGWCC	3 cut(s)	316, 488, 1769
BaeGI	GKGCMC	2 cut(s)	1708, 1724
BalI	TGGCCA	1 cut(s)	1947
BanI	GGYRCC	1 cut(s)	51
BanII	GRGCYC	4 cut(s)	202, 593, 930, 1708
BauI	CACGAG	2 cut(s)	536, 2168
Bbv12I	GWGCWC	1 cut(s)	202
BbvI	GCAGC	6 cut(s)	1915, 1927, 2023, 2039, 2422, 2444
BccI	CCATC	5 cut(s)	138, 839, 1007, 1291, 1628
BceAI	ACGGC	2 cut(s)	103, 2045
BciT130I	CCWGG	5 cut(s)	337, 486, 931, 1078, 1911
BciVI	GTATCC	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	10
BcoDI	GTCTC	6 cut(s)	369, 475, 576, 599, 1653, 2120
BcuI	ACTAGT	1 cut(s)	1601
BfaI	CTAG	7 cut(s)	867, 1217, 1278, 1602, 1632, 2324, 2626
BfmI	CTRYAG	4 cut(s)	645, 1389, 2025, 2037
BfoI	RGCGCY	1 cut(s)	55
BfrI	CTTAAG	1 cut(s)	706
BfuI	GTATCC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	1972
BisI	GCNGC	7 cut(s)	14, 1904, 1941, 2028, 2037, 2433, 2436
BlpI	GCTNAGC	1 cut(s)	98
BlsI	GCNGC	7 cut(s)	15, 1905, 1942, 2029, 2038, 2434, 2437
BmcAI	AGTACT	1 cut(s)	1192
Bme1390I	CCNGG	6 cut(s)	10, 337, 486, 931, 1078, 1911
Bme18I	GGWCC	3 cut(s)	316, 488, 1769
BmeT110I	CYCGRG	2 cut(s)	401, 1707
BmgT120I	GGNCC	5 cut(s)	316, 488, 1704, 1705, 1769
BmrFI	CCNGG	6 cut(s)	10, 337, 486, 931, 1078, 1911
BmrI	ACTGGG	1 cut(s)	321
BmsI	GCATC	1 cut(s)	1501
BmuI	ACTGGG	1 cut(s)	321
BpmI	CTGGAG	2 cut(s)	624, 1893
Bpu1102I	GCTNAGC	1 cut(s)	98
Bpu14I	TTCGAA	2 cut(s)	1374, 1422
BpuMI	CCSGG	1 cut(s)	10
BsaHI	GRCGYC	1 cut(s)	52
BsaI	GGTCTC	1 cut(s)	475
BsaXI	ACNNNNNCTCC	4 cut(s)	556, 586, 917, 947
Bsc4I	CCNNNNNNNGG	5 cut(s)	524, 1131, 1246, 1247, 1916
Bse1I	ACTGG	4 cut(s)	316, 1149, 1164, 2625
Bse3DI	GCAATG	3 cut(s)	188, 1887, 2091
BseBI	CCWGG	5 cut(s)	337, 486, 931, 1078, 1911
BseGI	GGATG	7 cut(s)	561, 580, 661, 1036, 1516, 2385, 2586
BseLI	CCNNNNNNNGG	5 cut(s)	524, 1131, 1246, 1247, 1916
BseMI	GCAATG	3 cut(s)	188, 1887, 2091
BseMII	CTCAG	7 cut(s)	648, 1469, 1539, 2115, 2302, 2331, 2456
BseNI	ACTGG	4 cut(s)	316, 1149, 1164, 2625
BseRI	GAGGAG	3 cut(s)	61, 938, 1508
BseSI	GKGCMC	2 cut(s)	1708, 1724
BseXI	GCAGC	6 cut(s)	1915, 1927, 2023, 2039, 2422, 2444
BseYI	CCCAGC	1 cut(s)	1756
BsgI	GTGCAG	2 cut(s)	1217, 2129
BshFI	GGCC	5 cut(s)	8, 460, 1706, 1947, 2510
BshNI	GGYRCC	1 cut(s)	51
BsiHKAI	GWGCWC	1 cut(s)	202
BsiHKCI	CYCGRG	2 cut(s)	401, 1707
BsiSI	CCGG	1 cut(s)	9
BslFI	GGGAC	4 cut(s)	329, 560, 1223, 2608
BslI	CCNNNNNNNGG	5 cut(s)	524, 1131, 1246, 1247, 1916
BsmAI	GTCTC	6 cut(s)	369, 475, 576, 599, 1653, 2120
BsmBI	CGTCTC	1 cut(s)	2120
BsmFI	GGGAC	4 cut(s)	329, 560, 1223, 2608
BsnI	GGCC	5 cut(s)	8, 460, 1706, 1947, 2510
Bso31I	GGTCTC	1 cut(s)	475
BsoBI	CYCGRG	2 cut(s)	401, 1707
Bsp119I	TTCGAA	2 cut(s)	1374, 1422
Bsp120I	GGGCCC	1 cut(s)	1704
Bsp1286I	GDGCHC	5 cut(s)	202, 593, 930, 1708, 1724
Bsp1407I	TGTACA	2 cut(s)	170, 1735
Bsp143I	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
Bsp1720I	GCTNAGC	1 cut(s)	98
Bsp19I	CCATGG	3 cut(s)	213, 584, 2590
BspACI	CCGC	2 cut(s)	13, 58
BspANI	GGCC	5 cut(s)	8, 460, 1706, 1947, 2510
BspCNI	CTCAG	7 cut(s)	647, 1468, 1538, 2114, 2301, 2332, 2457
BspHI	TCATGA	1 cut(s)	1690
BspMAI	CTGCAG	3 cut(s)	1393, 2029, 2041
BspT104I	TTCGAA	2 cut(s)	1374, 1422
BspT107I	GGYRCC	1 cut(s)	51
BspTI	CTTAAG	1 cut(s)	706
BspTNI	GGTCTC	1 cut(s)	475
BsrDI	GCAATG	3 cut(s)	188, 1887, 2091
BsrGI	TGTACA	2 cut(s)	170, 1735
BsrI	ACTGG	4 cut(s)	316, 1149, 1164, 2625
BssMI	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
BssNI	GRCGYC	1 cut(s)	52
BssSI	CACGAG	2 cut(s)	536, 2168
BssT1I	CCWWGG	6 cut(s)	142, 213, 584, 966, 2156, 2590
Bst2BI	CACGAG	2 cut(s)	536, 2168
Bst2UI	CCWGG	5 cut(s)	337, 486, 931, 1078, 1911
Bst4CI	ACNGT	9 cut(s)	527, 1195, 1364, 1484, 1684, 1927, 1936, 2131, 2231
Bst6I	CTCTTC	5 cut(s)	71, 79, 597, 1117, 2265
BstACI	GRCGYC	1 cut(s)	52
BstAFI	CTTAAG	1 cut(s)	706
BstAPI	GCANNNNNTGC	2 cut(s)	2024, 2033
BstAUI	TGTACA	2 cut(s)	170, 1735
BstBI	TTCGAA	2 cut(s)	1374, 1422
BstC8I	GCNNGC	3 cut(s)	1945, 2016, 2559
BstDSI	CCRYGG	3 cut(s)	213, 584, 2590
BstEII	GGTNACC	2 cut(s)	848, 2173
BstF5I	GGATG	7 cut(s)	561, 580, 661, 1036, 1516, 2385, 2586
BstH2I	RGCGCY	1 cut(s)	55
BstHHI	GCGC	1 cut(s)	54
BstKTI	GATC	7 cut(s)	283, 820, 1522, 1975, 2206, 2215, 2277
BstMAI	GTCTC	6 cut(s)	369, 475, 576, 599, 1653, 2120
BstMBI	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
BstMWI	GCNNNNNNNGC	3 cut(s)	2024, 2033, 2036
BstNI	CCWGG	5 cut(s)	337, 486, 931, 1078, 1911
BstNSI	RCATGY	3 cut(s)	1411, 2018, 2561
BstPI	GGTNACC	2 cut(s)	848, 2173
BstSCI	CCNGG	6 cut(s)	8, 335, 484, 929, 1076, 1909
BstSFI	CTRYAG	4 cut(s)	645, 1389, 2025, 2037
BstSLI	GKGCMC	2 cut(s)	1708, 1724
BstV1I	GCAGC	6 cut(s)	1915, 1927, 2023, 2039, 2422, 2444
BstX2I	RGATCY	1 cut(s)	1972
BstXI	CCANNNNNNTGG	1 cut(s)	1250
BstYI	RGATCY	1 cut(s)	1972
BsuI	GTATCC	1 cut(s)	973
BsuRI	GGCC	5 cut(s)	8, 460, 1706, 1947, 2510
BtgI	CCRYGG	3 cut(s)	213, 584, 2590
BtsCI	GGATG	7 cut(s)	561, 580, 661, 1036, 1516, 2385, 2586
BtsI	GCAGTG	3 cut(s)	695, 864, 1205
BtsIMutI	CAGTG	7 cut(s)	309, 695, 864, 1205, 1489, 1775, 1864
Cac8I	GCNNGC	3 cut(s)	1945, 2016, 2559
CaiI	CAGNNNCTG	1 cut(s)	1809
CciI	TCATGA	1 cut(s)	1690
CfoI	GCGC	1 cut(s)	54
Cfr13I	GGNCC	5 cut(s)	316, 488, 1704, 1705, 1769
CseI	GACGC	1 cut(s)	91
DinI	GGCGCC	1 cut(s)	53
DpnI	GATC	7 cut(s)	282, 819, 1521, 1974, 2205, 2214, 2276
DpnII	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
DrdI	GACNNNNNNGTC	1 cut(s)	568
DseDI	GACNNNNNNGTC	1 cut(s)	568
EaeI	YGGCCR	2 cut(s)	1945, 2508
Eam1104I	CTCTTC	5 cut(s)	71, 79, 597, 1117, 2265
EarI	CTCTTC	5 cut(s)	71, 79, 597, 1117, 2265
Ecl136II	GAGCTC	1 cut(s)	200
Eco130I	CCWWGG	6 cut(s)	142, 213, 584, 966, 2156, 2590
Eco24I	GRGCYC	4 cut(s)	202, 593, 930, 1708
Eco31I	GGTCTC	1 cut(s)	475
Eco32I	GATATC	1 cut(s)	911
Eco47I	GGWCC	3 cut(s)	316, 488, 1769
Eco53kI	GAGCTC	1 cut(s)	200
Eco57I	CTGAAG	2 cut(s)	1074, 2171
Eco88I	CYCGRG	2 cut(s)	401, 1707
Eco91I	GGTNACC	2 cut(s)	848, 2173
EcoICRI	GAGCTC	1 cut(s)	200
EcoO109I	RGGNCCY	2 cut(s)	316, 1769
EcoO65I	GGTNACC	2 cut(s)	848, 2173
EcoRI	GAATTC	3 cut(s)	494, 1273, 2255
EcoRII	CCWGG	5 cut(s)	335, 484, 929, 1076, 1909
EcoRV	GATATC	1 cut(s)	911
EcoT14I	CCWWGG	6 cut(s)	142, 213, 584, 966, 2156, 2590
EcoT22I	ATGCAT	1 cut(s)	1516
EcoT38I	GRGCYC	4 cut(s)	202, 593, 930, 1708
EgeI	GGCGCC	1 cut(s)	53
EheI	GGCGCC	1 cut(s)	53
ErhI	CCWWGG	6 cut(s)	142, 213, 584, 966, 2156, 2590
Esp3I	CGTCTC	1 cut(s)	2120
FalI	AAGNNNNNCTT	2 cut(s)	2412, 2444
FaqI	GGGAC	4 cut(s)	329, 560, 1223, 2608
FauNDI	CATATG	3 cut(s)	1245, 1368, 2568
Fnu4HI	GCNGC	7 cut(s)	14, 1904, 1941, 2028, 2037, 2433, 2436
FokI	GGATG	7 cut(s)	567, 568, 668, 1043, 1523, 2392, 2573
FriOI	GRGCYC	4 cut(s)	202, 593, 930, 1708
Fsp4HI	GCNGC	7 cut(s)	14, 1904, 1941, 2028, 2037, 2433, 2436
FspBI	CTAG	7 cut(s)	867, 1217, 1278, 1602, 1632, 2324, 2626
GlaI	GCGC	1 cut(s)	53
GluI	GCNGC	7 cut(s)	14, 1904, 1941, 2028, 2037, 2433, 2436
GsaI	CCCAGC	1 cut(s)	1760
GsuI	CTGGAG	2 cut(s)	624, 1893
HaeII	RGCGCY	1 cut(s)	55
HaeIII	GGCC	5 cut(s)	8, 460, 1706, 1947, 2510
HapII	CCGG	1 cut(s)	9
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	1 cut(s)	54
Hin1I	GRCGYC	1 cut(s)	52
Hin6I	GCGC	1 cut(s)	52
HinP1I	GCGC	1 cut(s)	52
HincII	GTYRAC	3 cut(s)	523, 2149, 2425
HindII	GTYRAC	3 cut(s)	523, 2149, 2425
HinfI	GANTC	8 cut(s)	548, 692, 737, 862, 1806, 1842, 2150, 2238
HpaII	CCGG	1 cut(s)	9
HphI	GGTGA	4 cut(s)	553, 860, 1607, 1643
Hpy166II	GTNNAC	6 cut(s)	523, 749, 1874, 2149, 2425, 2606
Hpy8I	GTNNAC	6 cut(s)	523, 749, 1874, 2149, 2425, 2606
HpyCH4III	ACNGT	9 cut(s)	527, 1195, 1364, 1484, 1684, 1927, 1936, 2131, 2231
HpyCH4IV	ACGT	1 cut(s)	306
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2024, 2033, 2036
HpySE526I	ACGT	1 cut(s)	306
Hsp92I	GRCGYC	1 cut(s)	52
HspAI	GCGC	1 cut(s)	52
KasI	GGCGCC	1 cut(s)	51
Kzo9I	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
LmnI	GCTCC	8 cut(s)	205, 338, 643, 925, 1312, 1495, 2011, 2057
Lsp1109I	GCAGC	6 cut(s)	1915, 1927, 2023, 2039, 2422, 2444
LweI	GCATC	1 cut(s)	1501
MaeI	CTAG	7 cut(s)	867, 1217, 1278, 1602, 1632, 2324, 2626
MaeII	ACGT	1 cut(s)	306
MalI	GATC	7 cut(s)	282, 819, 1521, 1974, 2205, 2214, 2276
MboI	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
MflI	RGATCY	1 cut(s)	1972
MhlI	GDGCHC	5 cut(s)	202, 593, 930, 1708, 1724
MlsI	TGGCCA	1 cut(s)	1947
MluNI	TGGCCA	1 cut(s)	1947
Mly113I	GGCGCC	1 cut(s)	52
MlyI	GAGTC	4 cut(s)	542, 701, 731, 2144
Mox20I	TGGCCA	1 cut(s)	1947
Mph1103I	ATGCAT	1 cut(s)	1516
MscI	TGGCCA	1 cut(s)	1947
MseI	TTAA	9 cut(s)	243, 707, 812, 1107, 1185, 1533, 1796, 1991, 2121
MslI	CAYNNNNRTG	5 cut(s)	1248, 1545, 2486, 2504, 2589
Msp20I	TGGCCA	1 cut(s)	1947
MspA1I	CMGCKG	1 cut(s)	2435
MspCI	CTTAAG	1 cut(s)	706
MspI	CCGG	1 cut(s)	9
MspR9I	CCNGG	6 cut(s)	10, 337, 486, 931, 1078, 1911
MvaI	CCWGG	5 cut(s)	337, 486, 931, 1078, 1911
MwoI	GCNNNNNNNGC	3 cut(s)	2024, 2033, 2036
NarI	GGCGCC	1 cut(s)	52
NciI	CCSGG	1 cut(s)	10
NcoI	CCATGG	3 cut(s)	213, 584, 2590
NdeI	CATATG	3 cut(s)	1245, 1368, 2568
NdeII	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
NmeAIII	GCCGAG	2 cut(s)	28, 309
NmuCI	GTSAC	8 cut(s)	307, 467, 693, 791, 848, 1426, 1484, 1684
NsiI	ATGCAT	1 cut(s)	1516
NspI	RCATGY	3 cut(s)	1411, 2018, 2561
NspV	TTCGAA	2 cut(s)	1374, 1422
PaeI	GCATGC	2 cut(s)	2018, 2561
PaeR7I	CTCGAG	1 cut(s)	401
PagI	TCATGA	1 cut(s)	1690
PasI	CCCWGGG	1 cut(s)	1077
PfeI	GAWTC	4 cut(s)	862, 1806, 1842, 2238
PflMI	CCANNNNNTGG	1 cut(s)	1916
PkrI	GCNGC	7 cut(s)	15, 1905, 1942, 2029, 2038, 2434, 2437
PleI	GAGTC	4 cut(s)	542, 700, 731, 2144
PluTI	GGCGCC	1 cut(s)	55
PpsI	GAGTC	4 cut(s)	542, 700, 731, 2144
PpuMI	RGGWCCY	2 cut(s)	316, 1769
Psp124BI	GAGCTC	1 cut(s)	202
Psp5II	RGGWCCY	2 cut(s)	316, 1769
Psp6I	CCWGG	5 cut(s)	335, 484, 929, 1076, 1909
PspEI	GGTNACC	2 cut(s)	848, 2173
PspFI	CCCAGC	1 cut(s)	1756
PspGI	CCWGG	5 cut(s)	335, 484, 929, 1076, 1909
PspOMI	GGGCCC	1 cut(s)	1704
PspPI	GGNCC	5 cut(s)	316, 488, 1704, 1705, 1769
PspPPI	RGGWCCY	2 cut(s)	316, 1769
PstI	CTGCAG	3 cut(s)	1393, 2029, 2041
PstNI	CAGNNNCTG	1 cut(s)	1809
PsuI	RGATCY	1 cut(s)	1972
PvuII	CAGCTG	1 cut(s)	2435
RseI	CAYNNNNRTG	5 cut(s)	1248, 1545, 2486, 2504, 2589
SacI	GAGCTC	1 cut(s)	202
SaqAI	TTAA	9 cut(s)	243, 707, 812, 1107, 1185, 1533, 1796, 1991, 2121
SatI	GCNGC	7 cut(s)	14, 1904, 1941, 2028, 2037, 2433, 2436
Sau3AI	GATC	7 cut(s)	280, 817, 1519, 1972, 2203, 2212, 2274
Sau96I	GGNCC	5 cut(s)	316, 488, 1704, 1705, 1769
ScaI	AGTACT	1 cut(s)	1192
SchI	GAGTC	4 cut(s)	542, 701, 731, 2144
ScrFI	CCNGG	6 cut(s)	10, 337, 486, 931, 1078, 1911
SduI	GDGCHC	5 cut(s)	202, 593, 930, 1708, 1724
SfaNI	GCATC	1 cut(s)	1501
SfcI	CTRYAG	4 cut(s)	645, 1389, 2025, 2037
SfoI	GGCGCC	1 cut(s)	53
Sfr274I	CTCGAG	1 cut(s)	401
SfuI	TTCGAA	2 cut(s)	1374, 1422
SinI	GGWCC	3 cut(s)	316, 488, 1769
SlaI	CTCGAG	1 cut(s)	401
SmiMI	CAYNNNNRTG	5 cut(s)	1248, 1545, 2486, 2504, 2589
SmlI	CTYRAG	2 cut(s)	401, 706
SmoI	CTYRAG	2 cut(s)	401, 706
SpeI	ACTAGT	1 cut(s)	1601
SphI	GCATGC	2 cut(s)	2018, 2561
SsiI	CCGC	2 cut(s)	13, 58
SspDI	GGCGCC	1 cut(s)	51
SspMI	CTAG	7 cut(s)	867, 1217, 1278, 1602, 1632, 2324, 2626
SstI	GAGCTC	1 cut(s)	202
StyD4I	CCNGG	6 cut(s)	8, 335, 484, 929, 1076, 1909
StyI	CCWWGG	6 cut(s)	142, 213, 584, 966, 2156, 2590
TaaI	ACNGT	9 cut(s)	527, 1195, 1364, 1484, 1684, 1927, 1936, 2131, 2231
TaiI	ACGT	1 cut(s)	309
TaqI	TCGA	6 cut(s)	273, 402, 939, 1374, 1422, 2215
TatI	WGTACW	4 cut(s)	170, 1190, 1735, 2605
TauI	GCSGC	1 cut(s)	16
TfiI	GAWTC	4 cut(s)	862, 1806, 1842, 2238
Tru1I	TTAA	9 cut(s)	243, 707, 812, 1107, 1185, 1533, 1796, 1991, 2121
Tru9I	TTAA	9 cut(s)	243, 707, 812, 1107, 1185, 1533, 1796, 1991, 2121
TscAI	CASTG	7 cut(s)	316, 702, 864, 1205, 1489, 1782, 1864
TseFI	GTSAC	8 cut(s)	307, 467, 693, 791, 848, 1426, 1484, 1684
TseI	GCWGC	6 cut(s)	1903, 1940, 2027, 2036, 2432, 2435
Tsp45I	GTSAC	8 cut(s)	307, 467, 693, 791, 848, 1426, 1484, 1684
TspGWI	ACGGA	2 cut(s)	917, 2024
TspRI	CASTG	7 cut(s)	316, 702, 864, 1205, 1489, 1782, 1864
Van91I	CCANNNNNTGG	1 cut(s)	1916
Vha464I	CTTAAG	1 cut(s)	706
VpaK11BI	GGWCC	3 cut(s)	316, 488, 1769
XapI	RAATTY	6 cut(s)	421, 494, 760, 1024, 1273, 2255
XbaI	TCTAGA	1 cut(s)	1277
XceI	RCATGY	3 cut(s)	1411, 2018, 2561
XhoI	CTCGAG	1 cut(s)	401
XspI	CTAG	7 cut(s)	867, 1217, 1278, 1602, 1632, 2324, 2626
ZrmI	AGTACT	1 cut(s)	1192
Zsp2I	ATGCAT	1 cut(s)	1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.