Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009937

Physical Location & Seq

Genomic Coordinates Forward (+)

21522443 .. 21525872

Gene Structure 3430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G209500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGAAAGTGGAGCTCAATCCTAATCATCACCATCAGGATCAAGGGACCAAGACCGAGATGTGCAGGACTATCGAAGTCGTCGCCGGAGGCGTTGTGCTCTCTCCGGCGAAGCAAGTCGCCGGCGCCGACGACTGCGCCGACGACCTCTTCATTCCGCCGCTCAACTTCTCCATGGTCGATAACGGCATTTTCAGGTCCGGCTTCCCGGAGTCCGCCAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGCTCCATCATATGTCTGTGTCCAGAGCCGTATCCAGAGGCGAACGTGGAGTTTTTAAAGTCCAATGGGATTAAGCTCTTTCAATTTGGGATTGAAGGCTACAAGGAGCCTTTTGTAAACATCCCAGAGGATACAATCCGTGAAGCGCTAAAAGTTGTCCTTGATGTAAGGAATCATCCTGTCTTAATTCATTGTAAACGAGGGAAGCATCGAACTGGTTGTCTTGTGGGATGCTTGAGAAAATTGCAGAGGTGGTGCCTGACATCTGTATTTGACGAATACCAGCGGTTTGCAGCTGCGAAAGCCAGAGTTGCAGATCAAAGGTTCATGGAGATGTTTGATGTTTCTAGCTTGAAACATCTACCGATGCCATTTTCATGTTCAAAGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0031347 GO:0032101 GO:0035335 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0065007 GO:0071704 GO:0080134 GO:0140096 GO:1900150 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Y_phosphatase2

Protein Analysis

213

Amino Acids

23.92

Weight (kDa)

8.07

Isoelectric Point (pI)

47.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05000 AT1G05000 AT1G05000
fragaria_vesca	FvH4_6g42080
malus_domestica	MD09G1115000.v1.1 MD09G1115100.v1.1 MD17G1106400.v1.1
prunus_persica	Prupe.3G209500_v2.0.a1 Prupe.3G209500_v2.0.a1
pyrus_communis	pycom09g03930 pycom17g09930
rosa_chinensis	RchiOBHm_Chr2g0158001
rosa_laevigata	RLG00000021047
rosa_multiflora	Rmu_sc0000419.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091760
rosa_rugosa	Rorug02G0465100 Rorug02G0465200
rosa_samantha	Rh2AG531000 Rh2BG545500 Rh2DG553600
rosa_wichuraiana	Rw2G043910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	122, 501
AccBSI	CCGCTC	2 cut(s)	160, 249
AciI	CCGC	5 cut(s)	155, 158, 213, 247, 532
AclWI	GGATC	1 cut(s)	45
AcyI	GRCGYC	1 cut(s)	123
AfeI	AGCGCT	1 cut(s)	393
AgsI	TTSAA	4 cut(s)	329, 341, 601, 630
AjuI	GAANNNNNNNTTGG	2 cut(s)	209, 241
AluBI	AGCT	4 cut(s)	13, 322, 542, 597
AluI	AGCT	4 cut(s)	13, 322, 542, 597
Alw21I	GWGCWC	2 cut(s)	15, 99
AlwI	GGATC	1 cut(s)	45
Aor51HI	AGCGCT	1 cut(s)	393
AoxI	GGCC	1 cut(s)	241
ApeKI	GCWGC	2 cut(s)	539, 542
ArsI	GACNNNNNNTTYG	2 cut(s)	451, 483
AspA2I	CCTAGG	1 cut(s)	238
AspLEI	GCGC	3 cut(s)	125, 137, 394
AspS9I	GGNCC	2 cut(s)	45, 195
AsuC2I	CCSGG	1 cut(s)	206
AsuHPI	GGTGA	1 cut(s)	20
AvaII	GGWCC	2 cut(s)	45, 195
AvrII	CCTAGG	1 cut(s)	238
BanI	GGYRCC	2 cut(s)	122, 501
BanII	GRGCYC	1 cut(s)	15
Bbv12I	GWGCWC	2 cut(s)	15, 99
BbvI	GCAGC	2 cut(s)	529, 551
BccI	CCATC	2 cut(s)	39, 260
BceAI	ACGGC	2 cut(s)	199, 259
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciVI	GTATCC	2 cut(s)	288, 370
BcnI	CCSGG	1 cut(s)	206
BfaI	CTAG	2 cut(s)	239, 594
BfoI	RGCGCY	2 cut(s)	126, 395
BfuI	GTATCC	2 cut(s)	288, 370
BisI	GCNGC	3 cut(s)	158, 540, 543
BlnI	CCTAGG	1 cut(s)	238
BlsI	GCNGC	3 cut(s)	159, 541, 544
Bme1390I	CCNGG	1 cut(s)	206
Bme18I	GGWCC	2 cut(s)	45, 195
BmgT120I	GGNCC	2 cut(s)	45, 195
BmiI	GGNNCC	4 cut(s)	46, 124, 354, 503
BmrFI	CCNGG	1 cut(s)	206
BmsI	GCATC	3 cut(s)	463, 467, 603
BpuEI	CTTGAG	1 cut(s)	502
BpuMI	CCSGG	1 cut(s)	206
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	2 cut(s)	171, 238
BsaXI	ACNNNNNCTCC	2 cut(s)	78, 108
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	1 cut(s)	466
BseDI	CCNNGG	2 cut(s)	171, 238
BseGI	GGATG	3 cut(s)	366, 421, 482
BseNI	ACTGG	1 cut(s)	466
BseXI	GCAGC	2 cut(s)	529, 551
BsgI	GTGCAG	1 cut(s)	82
BshFI	GGCC	1 cut(s)	243
BshNI	GGYRCC	2 cut(s)	122, 501
BsiHKAI	GWGCWC	2 cut(s)	15, 99
BsiSI	CCGG	5 cut(s)	84, 104, 120, 198, 206
BslFI	GGGAC	1 cut(s)	58
BsmFI	GGGAC	1 cut(s)	58
BsnI	GGCC	1 cut(s)	243
Bsp1286I	GDGCHC	2 cut(s)	15, 99
Bsp143I	GATC	2 cut(s)	37, 562
Bsp19I	CCATGG	1 cut(s)	171
BspACI	CCGC	5 cut(s)	155, 158, 213, 247, 532
BspANI	GGCC	1 cut(s)	243
BspLI	GGNNCC	4 cut(s)	46, 124, 354, 503
BspPI	GGATC	1 cut(s)	45
BspT107I	GGYRCC	2 cut(s)	122, 501
BsrBI	CCGCTC	2 cut(s)	160, 249
BsrFI	RCCGGY	1 cut(s)	119
BsrI	ACTGG	1 cut(s)	466
BssAI	RCCGGY	1 cut(s)	119
BssECI	CCNNGG	2 cut(s)	171, 238
BssMI	GATC	2 cut(s)	37, 562
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	171, 238
Bst6I	CTCTTC	1 cut(s)	152
BstACI	GRCGYC	1 cut(s)	123
BstC8I	GCNNGC	1 cut(s)	121
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	3 cut(s)	366, 421, 482
BstH2I	RGCGCY	2 cut(s)	126, 395
BstHHI	GCGC	3 cut(s)	125, 137, 394
BstKTI	GATC	2 cut(s)	40, 565
BstMBI	GATC	2 cut(s)	37, 562
BstMWI	GCNNNNNNNGC	2 cut(s)	548, 557
BstSCI	CCNGG	1 cut(s)	204
BstV1I	GCAGC	2 cut(s)	529, 551
BsuI	GTATCC	2 cut(s)	288, 370
BsuRI	GGCC	1 cut(s)	243
BtgI	CCRYGG	1 cut(s)	171
BtsCI	GGATG	3 cut(s)	366, 421, 482
Cac8I	GCNNGC	1 cut(s)	121
CfoI	GCGC	3 cut(s)	125, 137, 394
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	2 cut(s)	45, 195
CviAII	CATG	3 cut(s)	172, 574, 624
DinI	GGCGCC	1 cut(s)	124
DpnI	GATC	2 cut(s)	39, 564
DpnII	GATC	2 cut(s)	37, 562
DraI	TTTAAA	1 cut(s)	303
Eam1104I	CTCTTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	152
EciI	GGCGGA	2 cut(s)	144, 202
Ecl136II	GAGCTC	1 cut(s)	13
Eco130I	CCWWGG	2 cut(s)	171, 238
Eco147I	AGGCCT	1 cut(s)	243
Eco24I	GRGCYC	1 cut(s)	15
Eco47I	GGWCC	2 cut(s)	45, 195
Eco47III	AGCGCT	1 cut(s)	393
Eco53kI	GAGCTC	1 cut(s)	13
EcoICRI	GAGCTC	1 cut(s)	13
EcoT14I	CCWWGG	2 cut(s)	171, 238
EcoT38I	GRGCYC	1 cut(s)	15
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
ErhI	CCWWGG	2 cut(s)	171, 238
FaeI	CATG	3 cut(s)	175, 577, 627
FaiI	YATR	5 cut(s)	173, 257, 259, 575, 625
FalI	AAGNNNNNCTT	2 cut(s)	390, 422
FaqI	GGGAC	1 cut(s)	58
FatI	CATG	3 cut(s)	171, 573, 623
FauNDI	CATATG	1 cut(s)	257
Fnu4HI	GCNGC	3 cut(s)	158, 540, 543
FokI	GGATG	3 cut(s)	353, 408, 489
FriOI	GRGCYC	1 cut(s)	15
Fsp4HI	GCNGC	3 cut(s)	158, 540, 543
FspBI	CTAG	2 cut(s)	239, 594
GlaI	GCGC	3 cut(s)	124, 136, 393
GluI	GCNGC	3 cut(s)	158, 540, 543
HaeII	RGCGCY	2 cut(s)	126, 395
HaeIII	GGCC	1 cut(s)	243
HapII	CCGG	5 cut(s)	84, 104, 120, 198, 206
HhaI	GCGC	3 cut(s)	125, 137, 394
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	3 cut(s)	175, 577, 627
Hin6I	GCGC	3 cut(s)	123, 135, 392
HinP1I	GCGC	3 cut(s)	123, 135, 392
HinfI	GANTC	2 cut(s)	209, 418
HpaII	CCGG	5 cut(s)	84, 104, 120, 198, 206
HphI	GGTGA	1 cut(s)	20
Hpy166II	GTNNAC	2 cut(s)	364, 443
Hpy188III	TCNNGA	3 cut(s)	35, 269, 281
Hpy8I	GTNNAC	2 cut(s)	364, 443
Hpy99I	CGWCG	3 cut(s)	83, 131, 143
HpyAV	CCTTC	2 cut(s)	235, 335
HpyCH4IV	ACGT	1 cut(s)	291
HpyCH4V	TGCA	4 cut(s)	63, 493, 539, 560
HpyF10VI	GCNNNNNNNGC	2 cut(s)	548, 557
HpySE526I	ACGT	1 cut(s)	291
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	3 cut(s)	175, 577, 627
HspAI	GCGC	3 cut(s)	123, 135, 392
KasI	GGCGCC	1 cut(s)	122
KroI	GCCGGC	1 cut(s)	119
KroNI	GCCGGC	1 cut(s)	121
Kzo9I	GATC	2 cut(s)	37, 562
LmnI	GCTCC	3 cut(s)	10, 254, 352
Lsp1109I	GCAGC	2 cut(s)	529, 551
LweI	GCATC	3 cut(s)	463, 467, 603
MaeI	CTAG	2 cut(s)	239, 594
MaeII	ACGT	1 cut(s)	291
MalI	GATC	2 cut(s)	39, 564
MbiI	CCGCTC	2 cut(s)	160, 249
MboI	GATC	2 cut(s)	37, 562
MboII	GAAGA	1 cut(s)	139
MhlI	GDGCHC	2 cut(s)	15, 99
MluCI	AATT	3 cut(s)	329, 432, 488
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	1 cut(s)	218
MnlI	CCTC	9 cut(s)	80, 155, 239, 254, 277, 367, 440, 489, 627
MreI	CGCCGGCG	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	119
MseI	TTAA	3 cut(s)	302, 318, 431
MslI	CAYNNNNRTG	2 cut(s)	578, 622
MspA1I	CMGCKG	2 cut(s)	532, 542
MspI	CCGG	5 cut(s)	84, 104, 120, 198, 206
MspR9I	CCNGG	1 cut(s)	206
MwoI	GCNNNNNNNGC	2 cut(s)	548, 557
NaeI	GCCGGC	1 cut(s)	121
NarI	GGCGCC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	206
NcoI	CCATGG	1 cut(s)	171
NdeI	CATATG	1 cut(s)	257
NdeII	GATC	2 cut(s)	37, 562
NgoMIV	GCCGGC	1 cut(s)	119
NlaIII	CATG	3 cut(s)	175, 577, 627
NlaIV	GGNNCC	4 cut(s)	46, 124, 354, 503
PceI	AGGCCT	1 cut(s)	243
PcsI	WCGNNNNNNNCGW	3 cut(s)	87, 123, 135
PdiI	GCCGGC	1 cut(s)	121
PfeI	GAWTC	1 cut(s)	418
PfoI	TCCNGGA	1 cut(s)	204
PkrI	GCNGC	3 cut(s)	159, 541, 544
PleI	GAGTC	1 cut(s)	217
PluTI	GGCGCC	1 cut(s)	126
PpsI	GAGTC	1 cut(s)	217
Psp124BI	GAGCTC	1 cut(s)	15
PspN4I	GGNNCC	4 cut(s)	46, 124, 354, 503
PspPI	GGNCC	2 cut(s)	45, 195
PvuII	CAGCTG	1 cut(s)	542
RseI	CAYNNNNRTG	2 cut(s)	578, 622
SacI	GAGCTC	1 cut(s)	15
SaqAI	TTAA	3 cut(s)	302, 318, 431
SatI	GCNGC	3 cut(s)	158, 540, 543
Sau3AI	GATC	2 cut(s)	37, 562
Sau96I	GGNCC	2 cut(s)	45, 195
SchI	GAGTC	1 cut(s)	218
ScrFI	CCNGG	1 cut(s)	206
SduI	GDGCHC	2 cut(s)	15, 99
SfaNI	GCATC	3 cut(s)	463, 467, 603
SfoI	GGCGCC	1 cut(s)	124
SgrAI	CRCCGGYG	1 cut(s)	119
SinI	GGWCC	2 cut(s)	45, 195
SmiMI	CAYNNNNRTG	2 cut(s)	578, 622
SmlI	CTYRAG	1 cut(s)	481
SmoI	CTYRAG	1 cut(s)	481
Sse9I	AATT	3 cut(s)	329, 432, 488
SseBI	AGGCCT	1 cut(s)	243
SsiI	CCGC	5 cut(s)	155, 158, 213, 247, 532
SspDI	GGCGCC	1 cut(s)	122
SspMI	CTAG	2 cut(s)	239, 594
SstI	GAGCTC	1 cut(s)	15
StuI	AGGCCT	1 cut(s)	243
StyD4I	CCNGG	1 cut(s)	204
StyI	CCWWGG	2 cut(s)	171, 238
TaiI	ACGT	1 cut(s)	294
TaqI	TCGA	3 cut(s)	72, 177, 457
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	3 cut(s)	329, 432, 488
TauI	GCSGC	1 cut(s)	160
TfiI	GAWTC	1 cut(s)	418
Tru1I	TTAA	3 cut(s)	302, 318, 431
Tru9I	TTAA	3 cut(s)	302, 318, 431
TseI	GCWGC	2 cut(s)	539, 542
TspDTI	ATGAA	5 cut(s)	17, 139, 425, 562, 612
TspGWI	ACGGA	1 cut(s)	374
VpaK11BI	GGWCC	2 cut(s)	45, 195
XmaJI	CCTAGG	1 cut(s)	238
XspI	CTAG	2 cut(s)	239, 594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.