Prupe.3G211100_v2.0.a1

nucleobase-ascorbate transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
21608449 .. 21614308
5860 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G211100.1

Sequence Viewer

Length: 1563 bp
ATGGCTGACATTACCCACCTTCCCATGGAACAGCTCCAAGACCTTGAGTATTGCATAGATTCCAACCCTCCTTGGGTTGAAACCATAGTTCTAGCATTTCAAAACTACATCATGATGCTGGGTACAAGTGTAATGATTCCTTCAGCCCTTGTCCCTGCAATGGGTGGAAGCGATGGTGATAAGGCACGAGTCATACAAACACTCCTCTTTGTAGCTGGAATTAACACACTTCTCCAAGCACTTTTTGGAACCAGGTTGCCTACTGTAGTTGGAGGCTCCTTTTCTTATGTCATTCCCATAGCTTATATTGTAAGCGACTCCAAACTGCAACGGATTATTGAACCCCATGAAAGATTTATTCAAACAATGCGTGCTATCCAAGGAGCTCTAATTGTAGCTTCAAGCATACAAATCATTCTGGGTTACAGCCAAGTTTGGGGTCTCTTCTCACGGTTTTTCAGTCCACTTGGCATGGCACCTGTAGTTGGATTGGTTGGCTTGGGATTGTTTGAGCGGGGGTTTCCTGCGTTGGGAAATTGTGTGGAAATTGGAATTCCAATGCTGTTGTTGGTCATTGGTTTGTCCCAATATCTGAAGCATGTGAGACCATTTAGAGGCGTCCCTATTTTTGAGCGGTTTCCAGTATTGTTTTGTGTCGCAATCATTTGGATCTATTCCCTTATCTTAACGGCCGGTGGGGCTTACCGTGACAAACCTGTTAGAACTCAAATCAGCTGCCGTACAGACAGGGAAAATCTCATATCTACTGCCCCATGGTTCAAGTTCCCATATCCTCTGCAGTGGGGTCCTCCTACATTTTCAGCTGGTCACTCATTCGCAATGATGTCAGCTGTTCTTGTTTCAATGGTTGAGTCAACAGGTGCATACAAGGCAGCATCAAGATTGGCGATTGCCACTCCTCCTCCTGCTTATGTATTGAGCCGGGGTATTGGCTGGCAGGGAATTGGCATTTTGCTTGATGGACTTTTTGGTACAGGCACTGGTTCTACTGTTTCTGTGGAAAATGTAGGACTTCTTGGACTGACCCGAGTTGGAAGTCGTAGAGTTGTTCAAATTTCTGCTGGATTCATGATATTCTTCTCAATCTTAGGTAAATTTGGGGCTGTATTTGCATCTATACCCTTCCCAATATATGCAGCACTATACTGTGTTGTCTTCGGCCTCGTGGGTTCAGTAGGATTGTCATTTCTTCAGTTCACAAACATGAACTCTATGAGAAACCTCATTATCACTGGGCTTTCCCTGTTCCTTGGGATATCTGTCCCTCGGTTCTTCAACGAATATTGGAATCCTTCGCACCATGGTCTCGTCCATACCAACGCTGGATGGTTCAATGCATTTTTGAATACCATATTCTCCTCTCCTCCGACGGTGGGGTTGATCGTGGCGGTGTTTCTCGACAACACCTTAGAGGTGGAAAAATCAAAGAAAGATAGAGGGATGCCATGGTGGGTTAAGTTCAGAACATTCAGAGGAGACAACAGAAATGAAGAGTTCTACACTTTGCCATTTAATCTCAACAGATTCTTCCCACCTACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

521

Amino Acids

57.26

Weight (kDa)

9.33

Isoelectric Point (pI)

29.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 475
AccBSI CCGCTC 2 cut(s) 514, 634
AciI CCGC 3 cut(s) 514, 634, 1409
AclWI GGATC 1 cut(s) 677
AcoI YGGCCR 1 cut(s) 690
AcsI RAATTY 3 cut(s) 552, 1074, 1115
AcuI CTGAAG 3 cut(s) 126, 614, 1196
AcyI GRCGYC 1 cut(s) 618
AfaI GTAC 3 cut(s) 124, 742, 994
AfiI CCNNNNNNNGG 9 cut(s) 25, 73, 160, 161, 436, 485, 530, 614, 1394
AjnI CCWGG 1 cut(s) 251
AluBI AGCT 8 cut(s) 34, 215, 302, 386, 398, 735, 824, 851
AluI AGCT 8 cut(s) 34, 215, 302, 386, 398, 735, 824, 851
Alw21I GWGCWC 1 cut(s) 388
Alw26I GTCTC 4 cut(s) 446, 598, 1331, 1491
AlwI GGATC 1 cut(s) 677
AlwNI CAGNNNCTG 1 cut(s) 1001
Ama87I CYCGRG 1 cut(s) 1047
AoxI GGCC 2 cut(s) 690, 1180
ApeKI GCWGC 3 cut(s) 735, 893, 1157
ApoI RAATTY 3 cut(s) 552, 1074, 1115
AspS9I GGNCC 1 cut(s) 806
AsuC2I CCSGG 1 cut(s) 944
AsuHPI GGTGA 1 cut(s) 188
AvaI CYCGRG 1 cut(s) 1047
AvaII GGWCC 1 cut(s) 806
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BanI GGYRCC 1 cut(s) 475
BanII GRGCYC 1 cut(s) 388
BauI CACGAG 2 cut(s) 186, 1184
BbsI GAAGAC 1 cut(s) 1168
Bbv12I GWGCWC 1 cut(s) 388
BbvI GCAGC 3 cut(s) 722, 905, 1169
BccI CCATC 3 cut(s) 167, 974, 1341
BceAI ACGGC 2 cut(s) 705, 723
BciT130I CCWGG 1 cut(s) 253
BcnI CCSGG 1 cut(s) 944
BcoDI GTCTC 4 cut(s) 446, 598, 1331, 1491
BfaI CTAG 1 cut(s) 92
BfmI CTRYAG 3 cut(s) 264, 480, 797
BglI GCCNNNNNGGC 1 cut(s) 698
BisI GCNGC 3 cut(s) 736, 894, 1158
BlsI GCNGC 3 cut(s) 737, 895, 1159
Bme1390I CCNGG 2 cut(s) 253, 944
Bme18I GGWCC 1 cut(s) 806
BmeT110I CYCGRG 1 cut(s) 1047
BmgT120I GGNCC 1 cut(s) 806
BmiI GGNNCC 4 cut(s) 250, 277, 477, 807
BmrFI CCNGG 2 cut(s) 253, 944
BmrI ACTGGG 1 cut(s) 1263
BmsI GCATC 4 cut(s) 105, 905, 1142, 1452
BmuI ACTGGG 1 cut(s) 1263
BpiI GAAGAC 1 cut(s) 1168
BpuEI CTTGAG 1 cut(s) 65
BpuMI CCSGG 1 cut(s) 944
BsaAI YACGTR 1 cut(s) 1560
BsaHI GRCGYC 1 cut(s) 618
BsaI GGTCTC 3 cut(s) 446, 598, 1331
BsaJI CCNNGG 9 cut(s) 24, 71, 379, 773, 943, 1270, 1286, 1321, 1466
BsaXI ACNNNNNCTCC 4 cut(s) 186, 216, 907, 937
Bsc4I CCNNNNNNNGG 9 cut(s) 25, 73, 160, 161, 436, 485, 530, 614, 1394
Bse118I RCCGGY 1 cut(s) 692
Bse1I ACTGG 3 cut(s) 641, 1006, 1258
Bse3DI GCAATG 2 cut(s) 165, 846
BseBI CCWGG 1 cut(s) 253
BseDI CCNNGG 9 cut(s) 24, 71, 379, 773, 943, 1270, 1286, 1321, 1466
BseGI GGATG 2 cut(s) 1352, 1467
BseLI CCNNNNNNNGG 9 cut(s) 25, 73, 160, 161, 436, 485, 530, 614, 1394
BseMI GCAATG 2 cut(s) 165, 846
BseNI ACTGG 3 cut(s) 641, 1006, 1258
BseRI GAGGAG 6 cut(s) 194, 909, 912, 1369, 1374, 1509
BseX3I CGGCCG 1 cut(s) 690
BseXI GCAGC 3 cut(s) 722, 905, 1169
BseYI CCCAGC 1 cut(s) 118
Bsh1285I CGRYCG 1 cut(s) 693
BshFI GGCC 2 cut(s) 692, 1182
BshNI GGYRCC 1 cut(s) 475
BsiEI CGRYCG 1 cut(s) 693
BsiHKAI GWGCWC 1 cut(s) 388
BsiHKCI CYCGRG 1 cut(s) 1047
BsiSI CCGG 2 cut(s) 693, 943
BslFI GGGAC 4 cut(s) 137, 568, 605, 1268
BslI CCNNNNNNNGG 9 cut(s) 25, 73, 160, 161, 436, 485, 530, 614, 1394
BsmAI GTCTC 4 cut(s) 446, 598, 1331, 1491
BsmFI GGGAC 4 cut(s) 137, 568, 605, 1268
BsnI GGCC 2 cut(s) 692, 1182
Bso31I GGTCTC 3 cut(s) 446, 598, 1331
BsoBI CYCGRG 1 cut(s) 1047
Bsp1286I GDGCHC 1 cut(s) 388
Bsp143I GATC 2 cut(s) 669, 1401
Bsp19I CCATGG 4 cut(s) 24, 773, 1321, 1466
BspACI CCGC 3 cut(s) 514, 634, 1409
BspANI GGCC 2 cut(s) 692, 1182
BspHI TCATGA 2 cut(s) 111, 1089
BspLI GGNNCC 4 cut(s) 250, 277, 477, 807
BspMAI CTGCAG 1 cut(s) 801
BspPI GGATC 1 cut(s) 677
BspT107I GGYRCC 1 cut(s) 475
BspTNI GGTCTC 3 cut(s) 446, 598, 1331
BsrBI CCGCTC 2 cut(s) 514, 634
BsrDI GCAATG 2 cut(s) 165, 846
BsrFI RCCGGY 1 cut(s) 692
BsrI ACTGG 3 cut(s) 641, 1006, 1258
BssAI RCCGGY 1 cut(s) 692
BssECI CCNNGG 9 cut(s) 24, 71, 379, 773, 943, 1270, 1286, 1321, 1466
BssMI GATC 2 cut(s) 669, 1401
BssNI GRCGYC 1 cut(s) 618
BssSI CACGAG 2 cut(s) 186, 1184
BssT1I CCWWGG 7 cut(s) 24, 71, 379, 773, 1270, 1321, 1466
Bst2BI CACGAG 2 cut(s) 186, 1184
Bst2UI CCWGG 1 cut(s) 253
Bst4CI ACNGT 6 cut(s) 265, 453, 707, 1012, 1169, 1393
Bst6I CTCTTC 2 cut(s) 449, 1506
BstACI GRCGYC 1 cut(s) 618
BstBAI YACGTR 1 cut(s) 1560
BstC8I GCNNGC 2 cut(s) 372, 956
BstDEI CTNAG 2 cut(s) 1108, 1429
BstDSI CCRYGG 4 cut(s) 24, 773, 1321, 1466
BstF5I GGATG 2 cut(s) 1352, 1467
BstKTI GATC 2 cut(s) 672, 1404
BstMAI GTCTC 4 cut(s) 446, 598, 1331, 1491
BstMBI GATC 2 cut(s) 669, 1401
BstMCI CGRYCG 1 cut(s) 693
BstMWI GCNNNNNNNGC 3 cut(s) 698, 890, 1130
BstNI CCWGG 1 cut(s) 253
BstNSI RCATGY 1 cut(s) 602
BstSCI CCNGG 2 cut(s) 251, 942
BstSFI CTRYAG 3 cut(s) 264, 480, 797
BstSNI TACGTA 1 cut(s) 1560
BstV1I GCAGC 3 cut(s) 722, 905, 1169
BstV2I GAAGAC 1 cut(s) 1168
BstX2I RGATCY 1 cut(s) 669
BstYI RGATCY 1 cut(s) 669
BstZI CGGCCG 1 cut(s) 690
BsuRI GGCC 2 cut(s) 692, 1182
BtgI CCRYGG 4 cut(s) 24, 773, 1321, 1466
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 2 cut(s) 1352, 1467
BtsI GCAGTG 1 cut(s) 806
BtsIMutI CAGTG 3 cut(s) 806, 999, 1251
Cac8I GCNNGC 2 cut(s) 372, 956
CaiI CAGNNNCTG 1 cut(s) 1001
CciI TCATGA 2 cut(s) 111, 1089
Cfr10I RCCGGY 1 cut(s) 692
Cfr13I GGNCC 1 cut(s) 806
CseI GACGC 1 cut(s) 607
CsiI ACCWGGT 1 cut(s) 251
Csp6I GTAC 3 cut(s) 123, 741, 993
CviQI GTAC 3 cut(s) 123, 741, 993
DdeI CTNAG 2 cut(s) 1108, 1429
DpnI GATC 2 cut(s) 671, 1403
DpnII GATC 2 cut(s) 669, 1401
EaeI YGGCCR 1 cut(s) 690
EagI CGGCCG 1 cut(s) 690
Eam1104I CTCTTC 2 cut(s) 449, 1506
EarI CTCTTC 2 cut(s) 449, 1506
Ecl136II GAGCTC 1 cut(s) 386
EclXI CGGCCG 1 cut(s) 690
Eco105I TACGTA 1 cut(s) 1560
Eco130I CCWWGG 7 cut(s) 24, 71, 379, 773, 1270, 1321, 1466
Eco24I GRGCYC 1 cut(s) 388
Eco31I GGTCTC 3 cut(s) 446, 598, 1331
Eco32I GATATC 1 cut(s) 1278
Eco47I GGWCC 1 cut(s) 806
Eco52I CGGCCG 1 cut(s) 690
Eco53kI GAGCTC 1 cut(s) 386
Eco57I CTGAAG 3 cut(s) 126, 614, 1196
Eco88I CYCGRG 1 cut(s) 1047
EcoICRI GAGCTC 1 cut(s) 386
EcoO109I RGGNCCY 1 cut(s) 806
EcoRI GAATTC 1 cut(s) 552
EcoRII CCWGG 1 cut(s) 251
EcoRV GATATC 1 cut(s) 1278
EcoT14I CCWWGG 7 cut(s) 24, 71, 379, 773, 1270, 1321, 1466
EcoT22I ATGCAT 1 cut(s) 1360
EcoT38I GRGCYC 1 cut(s) 388
ErhI CCWWGG 7 cut(s) 24, 71, 379, 773, 1270, 1321, 1466
FaqI GGGAC 4 cut(s) 137, 568, 605, 1268
FauI CCCGC 1 cut(s) 507
Fnu4HI GCNGC 3 cut(s) 736, 894, 1158
FokI GGATG 2 cut(s) 1359, 1474
FriOI GRGCYC 1 cut(s) 388
Fsp4HI GCNGC 3 cut(s) 736, 894, 1158
FspBI CTAG 1 cut(s) 92
GluI GCNGC 3 cut(s) 736, 894, 1158
GsaI CCCAGC 1 cut(s) 122
HaeIII GGCC 2 cut(s) 692, 1182
HapII CCGG 2 cut(s) 693, 943
HgaI GACGC 1 cut(s) 607
Hin1I GRCGYC 1 cut(s) 618
HincII GTYRAC 1 cut(s) 876
HindII GTYRAC 1 cut(s) 876
HinfI GANTC 8 cut(s) 59, 136, 189, 317, 872, 1086, 1309, 1545
HpaII CCGG 2 cut(s) 693, 943
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 3 cut(s) 464, 876, 1218
Hpy188I TCNGA 4 cut(s) 594, 1389, 1484, 1493
Hpy188III TCNNGA 4 cut(s) 112, 900, 1090, 1418
Hpy8I GTNNAC 3 cut(s) 464, 876, 1218
Hpy99I CGWCG 1 cut(s) 1393
HpyAV CCTTC 4 cut(s) 29, 150, 1153, 1323
HpyCH4III ACNGT 6 cut(s) 265, 453, 707, 1012, 1169, 1393
HpyCH4IV ACGT 1 cut(s) 1559
HpyCH4V TGCA 8 cut(s) 54, 158, 328, 799, 884, 1133, 1157, 1358
HpyF10VI GCNNNNNNNGC 3 cut(s) 698, 890, 1130
HpyF3I CTNAG 2 cut(s) 1108, 1429
HpySE526I ACGT 1 cut(s) 1559
Hsp92I GRCGYC 1 cut(s) 618
Kzo9I GATC 2 cut(s) 669, 1401
LmnI GCTCC 3 cut(s) 39, 281, 383
Lsp1109I GCAGC 3 cut(s) 722, 905, 1169
LweI GCATC 4 cut(s) 105, 905, 1142, 1452
MabI ACCWGGT 1 cut(s) 251
MaeI CTAG 1 cut(s) 92
MaeII ACGT 1 cut(s) 1559
MaeIII GTNAC 3 cut(s) 422, 707, 827
MalI GATC 2 cut(s) 671, 1403
MbiI CCGCTC 2 cut(s) 514, 634
MboI GATC 2 cut(s) 669, 1401
MboII GAAGA 7 cut(s) 436, 1090, 1168, 1202, 1285, 1523, 1540
MflI RGATCY 1 cut(s) 669
MhlI GDGCHC 1 cut(s) 388
MluCI AATT 8 cut(s) 219, 390, 535, 546, 552, 963, 1074, 1115
MlyI GAGTC 3 cut(s) 198, 311, 881
MmeI TCCRAC 5 cut(s) 87, 250, 466, 1033, 1412
Mph1103I ATGCAT 1 cut(s) 1360
MseI TTAA 4 cut(s) 222, 686, 1476, 1533
MslI CAYNNNNRTG 2 cut(s) 113, 1223
MspA1I CMGCKG 3 cut(s) 735, 824, 851
MspI CCGG 2 cut(s) 693, 943
MspR9I CCNGG 2 cut(s) 253, 944
MvaI CCWGG 1 cut(s) 253
MwoI GCNNNNNNNGC 3 cut(s) 698, 890, 1130
NciI CCSGG 1 cut(s) 944
NcoI CCATGG 4 cut(s) 24, 773, 1321, 1466
NdeII GATC 2 cut(s) 669, 1401
NlaIV GGNNCC 4 cut(s) 250, 277, 477, 807
NmuCI GTSAC 2 cut(s) 707, 827
NsiI ATGCAT 1 cut(s) 1360
NspI RCATGY 1 cut(s) 602
PagI TCATGA 2 cut(s) 111, 1089
PfeI GAWTC 5 cut(s) 59, 136, 1086, 1309, 1545
PkrI GCNGC 3 cut(s) 737, 895, 1159
PleI GAGTC 3 cut(s) 197, 311, 880
PpsI GAGTC 3 cut(s) 197, 311, 880
Ppu21I YACGTR 1 cut(s) 1560
PpuMI RGGWCCY 1 cut(s) 806
Psp124BI GAGCTC 1 cut(s) 388
Psp5II RGGWCCY 1 cut(s) 806
Psp6I CCWGG 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 118
PspGI CCWGG 1 cut(s) 251
PspN4I GGNNCC 4 cut(s) 250, 277, 477, 807
PspPI GGNCC 1 cut(s) 806
PspPPI RGGWCCY 1 cut(s) 806
PstI CTGCAG 1 cut(s) 801
PstNI CAGNNNCTG 1 cut(s) 1001
PsuI RGATCY 1 cut(s) 669
PvuII CAGCTG 3 cut(s) 735, 824, 851
RsaI GTAC 3 cut(s) 124, 742, 994
RsaNI GTAC 3 cut(s) 123, 741, 993
RseI CAYNNNNRTG 2 cut(s) 113, 1223
SacI GAGCTC 1 cut(s) 388
SaqAI TTAA 4 cut(s) 222, 686, 1476, 1533
SatI GCNGC 3 cut(s) 736, 894, 1158
Sau3AI GATC 2 cut(s) 669, 1401
Sau96I GGNCC 1 cut(s) 806
SchI GAGTC 3 cut(s) 198, 311, 881
ScrFI CCNGG 2 cut(s) 253, 944
SduI GDGCHC 1 cut(s) 388
SexAI ACCWGGT 1 cut(s) 251
SfaNI GCATC 4 cut(s) 105, 905, 1142, 1452
SfcI CTRYAG 3 cut(s) 264, 480, 797
SinI GGWCC 1 cut(s) 806
SmiMI CAYNNNNRTG 2 cut(s) 113, 1223
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
SnaBI TACGTA 1 cut(s) 1560
Sse9I AATT 8 cut(s) 219, 390, 535, 546, 552, 963, 1074, 1115
SsiI CCGC 3 cut(s) 514, 634, 1409
SspI AATATT 1 cut(s) 1304
SspMI CTAG 1 cut(s) 92
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 2 cut(s) 251, 942
StyI CCWWGG 7 cut(s) 24, 71, 379, 773, 1270, 1321, 1466
TaaI ACNGT 6 cut(s) 265, 453, 707, 1012, 1169, 1393
TaiI ACGT 1 cut(s) 1562
TaqI TCGA 1 cut(s) 1419
TasI AATT 8 cut(s) 219, 390, 535, 546, 552, 963, 1074, 1115
TfiI GAWTC 5 cut(s) 59, 136, 1086, 1309, 1545
Tru1I TTAA 4 cut(s) 222, 686, 1476, 1533
Tru9I TTAA 4 cut(s) 222, 686, 1476, 1533
TscAI CASTG 3 cut(s) 806, 1006, 1258
TseFI GTSAC 2 cut(s) 707, 827
TseI GCWGC 3 cut(s) 735, 893, 1157
Tsp45I GTSAC 2 cut(s) 707, 827
TspDTI ATGAA 4 cut(s) 363, 1078, 1241, 1524
TspGWI ACGGA 1 cut(s) 346
TspRI CASTG 3 cut(s) 806, 1006, 1258
VpaK11BI GGWCC 1 cut(s) 806
XapI RAATTY 3 cut(s) 552, 1074, 1115
XceI RCATGY 1 cut(s) 602
XcmI CCANNNNNNNNNTGG 2 cut(s) 242, 1340
XspI CTAG 1 cut(s) 92
Zsp2I ATGCAT 1 cut(s) 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.