Prupe.3G302300_v2.0.a1

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26628171 .. 26631231
3061 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G302300.1

Sequence Viewer

Length: 1545 bp
ATGGAGGTCAGTCCTCTGCATAATCGATGCATTTGGTCGTCGCCAGTTCGTTCTTCGTCCTCGCACCGCCCTCTCCTCGTTTCACTTTCAGCTCGGAAGAGCAAGAGCCCGGGGCTTGTACCTTCGTTTAGATCGACTCGCCGAAGAAATTTGTGCTCGGCTTCGAGCTCCGAGACCTTGATTGGGTCGCGTAAAGAGGACGGCAAGCACAGTCAGGTTGTCAGCAAGAAAGAAGAGGAGGAAGACTTGAAATCTTGGATGCACAAGAATGGGCTACCTCCTTGCAAAGTCGTGCTCAAAGAAAAGCCTTCGCATAATGAGAAACACAGGCCCATTCATTACGTAGCTGCCAGTGAAGATCTTCAGGTTGGCGATGTTGCATTTTCCGTGCCGGATTCCTTGGTCGTAACGCTTAAGAGAGTGTTGGGAAACGAAACAATTGCGGAATTATTAACTACAAACAAATTATCGGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAGAAACAAGGAAAGAATTCTTTTTGGTATCCATATATAAGAGAGCTTGATCGTCAGCGAGGGAGGGGTCAGTTAGCAGTGGAATCTCCCCTTTTGTGGTCAGAAGCTGAACTGGCTTATCTTACAGGCAGCCCCACAAAGGCTGAAGTTCATGAAAGGGGTGAAGGAATTAAAAGGGAATATAATGAACTTGACACTGTCTGGTTTATGGCTGGGTCCCTATTTCAGCAATATCCATATGATAGTCCTACCGAGGCCTTCCCATTTGAGATATTCAAACAAGCTTTTGTTGCAGTTCAGTCATGCGTAGTACATTTACAGAAAGTTAGCTTGGCTCAGAGATTTGCTTTGGTTCCTCTTGGGCCCCCATTGTTAGCTTACAGAAGCAACTGCAAGGCAATGTTGACAGCTACTGATGGTGCTGTTCAACTAGTGGTTGATCGCCCATATAAGGCAGGGGAATCTATTTGTGTTTGGTGTGGACCACAGCCTAATTCAAAATTGCTTATAAACTATGGTTTTGTTGATGAAGATAATTCTTATGACCGTTTGGTGGTTGAGGCATCTTTGAATACAGAGGATCCTCAATATCAAGATAAAAGAATGGTTGCTCAAAGAAATGGAAAATTATCAGTGCAAGCTTTTCAGGTAAATGTGGGAAAGGAAAAAGAAACGGTCTTTGATATGCTTCCTTATCTGCGACTGGGCTATGTTTCAGATCCTTCAGAGATGCAGTCTGTTATCTCTTCTCAAGGCCCAATTTGTCCGGTGAGTCCTTGTATGGAACGAGCAGTGTTGGACCAACTTGCTGATTATTTTAGAACACGGCTGGCTGGCTATCCAACTACATTGAGTGAAGATGAGTCTTTGTTGGCAGATGCAAATTTGAATCCAAAGAAGCGAGTTGCTACACAGCTTATTAGGTTAGAAAAGAAAATGCTCCATGCATGTCTGAAGGTGGCAGTTGATCTGATAAACCAGTTACCAGATCACACTGTATCTCCATGCCCAGCCCCTTATGCCCCTTCGTTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

515

Amino Acids

57.59

Weight (kDa)

8.31

Isoelectric Point (pI)

54.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1016
AccII CGCG 1 cut(s) 190
AciI CCGC 2 cut(s) 67, 443
AclWI GGATC 3 cut(s) 1082, 1095, 1220
AcsI RAATTY 3 cut(s) 148, 523, 1390
AcuI CTGAAG 4 cut(s) 347, 672, 1215, 1481
AfaI GTAC 2 cut(s) 120, 819
AfiI CCNNNNNNNGG 5 cut(s) 183, 603, 646, 958, 1060
AflII CTTAAG 1 cut(s) 413
AgsI TTSAA 7 cut(s) 250, 784, 935, 1005, 1078, 1396, 1540
AhlI ACTAGT 1 cut(s) 937
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
Alw21I GWGCWC 3 cut(s) 158, 170, 297
Alw26I GTCTC 1 cut(s) 167
AlwI GGATC 3 cut(s) 1082, 1095, 1220
AlwNI CAGNNNCTG 2 cut(s) 614, 920
Ama87I CYCGRG 1 cut(s) 109
AoxI GGCC 4 cut(s) 329, 762, 869, 1261
ApaI GGGCCC 1 cut(s) 873
ApeKI GCWGC 2 cut(s) 347, 636
ApoI RAATTY 3 cut(s) 148, 523, 1390
Asp700I GAANNNNTTC 2 cut(s) 360, 523
AspS9I GGNCC 7 cut(s) 330, 723, 869, 870, 989, 1262, 1306
AsuC2I CCSGG 2 cut(s) 110, 111
AsuHPI GGTGA 2 cut(s) 680, 1288
AvaI CYCGRG 1 cut(s) 109
AvaII GGWCC 3 cut(s) 723, 989, 1306
BaeGI GKGCMC 1 cut(s) 873
BamHI GGATCC 1 cut(s) 1087
BanII GRGCYC 3 cut(s) 110, 170, 873
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 3 cut(s) 158, 170, 297
BbvI GCAGC 2 cut(s) 334, 648
BccI CCATC 1 cut(s) 917
BceAI ACGGC 2 cut(s) 217, 1349
BcgI CGANNNNNNTGC 2 cut(s) 422, 456
BciVI GTATCC 1 cut(s) 546
BcnI CCSGG 2 cut(s) 110, 111
BcoDI GTCTC 1 cut(s) 167
BcuI ACTAGT 1 cut(s) 937
BfaI CTAG 1 cut(s) 938
BfrI CTTAAG 1 cut(s) 413
BfuI GTATCC 1 cut(s) 546
BglII AGATCT 1 cut(s) 358
BisI GCNGC 2 cut(s) 348, 637
BlsI GCNGC 2 cut(s) 349, 638
Bme1390I CCNGG 2 cut(s) 110, 111
Bme18I GGWCC 3 cut(s) 723, 989, 1306
BmeT110I CYCGRG 1 cut(s) 109
BmgT120I GGNCC 7 cut(s) 330, 723, 869, 870, 989, 1262, 1306
BmiI GGNNCC 6 cut(s) 724, 725, 861, 871, 872, 1089
BmrFI CCNGG 2 cut(s) 110, 111
BmrI ACTGGG 1 cut(s) 1220
BmsI GCATC 5 cut(s) 17, 249, 1079, 1227, 1375
BmuI ACTGGG 1 cut(s) 1220
BpiI GAAGAC 1 cut(s) 249
BpuEI CTTGAG 1 cut(s) 1242
BpuMI CCSGG 2 cut(s) 110, 111
Bsa29I ATCGAT 1 cut(s) 25
BsaAI YACGTR 1 cut(s) 343
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 4 cut(s) 109, 110, 399, 759
BsaWI WCCGGW 1 cut(s) 1273
BsaXI ACNNNNNCTCC 2 cut(s) 1492, 1522
Bsc4I CCNNNNNNNGG 5 cut(s) 183, 603, 646, 958, 1060
Bse1I ACTGG 5 cut(s) 44, 351, 624, 1215, 1486
Bse3DI GCAATG 1 cut(s) 912
BseCI ATCGAT 1 cut(s) 25
BseDI CCNNGG 4 cut(s) 109, 110, 399, 759
BseGI GGATG 1 cut(s) 264
BseLI CCNNNNNNNGG 5 cut(s) 183, 603, 646, 958, 1060
BseMI GCAATG 1 cut(s) 912
BseMII CTCAG 1 cut(s) 857
BseNI ACTGG 5 cut(s) 44, 351, 624, 1215, 1486
BseRI GAGGAG 2 cut(s) 65, 251
BseSI GKGCMC 1 cut(s) 873
BseXI GCAGC 2 cut(s) 334, 648
BseYI CCCAGC 2 cut(s) 719, 1516
Bsh1236I CGCG 1 cut(s) 190
BshFI GGCC 4 cut(s) 331, 764, 871, 1263
BshVI ATCGAT 1 cut(s) 25
BsiHKAI GWGCWC 3 cut(s) 158, 170, 297
BsiHKCI CYCGRG 1 cut(s) 109
BsiSI CCGG 3 cut(s) 110, 392, 1274
BslFI GGGAC 1 cut(s) 709
BslI CCNNNNNNNGG 5 cut(s) 183, 603, 646, 958, 1060
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 1 cut(s) 709
BsnI GGCC 4 cut(s) 331, 764, 871, 1263
Bso31I GGTCTC 1 cut(s) 167
BsoBI CYCGRG 1 cut(s) 109
Bsp120I GGGCCC 1 cut(s) 869
Bsp1286I GDGCHC 5 cut(s) 110, 158, 170, 297, 873
Bsp143I GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
BspACI CCGC 2 cut(s) 67, 443
BspANI GGCC 4 cut(s) 331, 764, 871, 1263
BspCNI CTCAG 1 cut(s) 856
BspDI ATCGAT 1 cut(s) 25
BspFNI CGCG 1 cut(s) 190
BspHI TCATGA 1 cut(s) 658
BspLI GGNNCC 6 cut(s) 724, 725, 861, 871, 872, 1089
BspPI GGATC 3 cut(s) 1082, 1095, 1220
BspQI GCTCTTC 1 cut(s) 92
BspTI CTTAAG 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 912
BsrI ACTGG 5 cut(s) 44, 351, 624, 1215, 1486
BssECI CCNNGG 4 cut(s) 109, 110, 399, 759
BssMI GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
BssT1I CCWWGG 1 cut(s) 399
Bst4CI ACNGT 5 cut(s) 212, 706, 1055, 1183, 1504
Bst6I CTCTTC 3 cut(s) 92, 228, 1258
BstAFI CTTAAG 1 cut(s) 413
BstBAI YACGTR 1 cut(s) 343
BstC8I GCNNGC 5 cut(s) 206, 481, 1146, 1338, 1342
BstDEI CTNAG 1 cut(s) 843
BstF5I GGATG 1 cut(s) 264
BstFNI CGCG 1 cut(s) 190
BstKTI GATC 8 cut(s) 134, 361, 559, 949, 1090, 1228, 1477, 1498
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
BstMWI GCNNNNNNNGC 4 cut(s) 485, 620, 797, 1526
BstNSI RCATGY 2 cut(s) 483, 1458
BstSCI CCNGG 2 cut(s) 108, 109
BstSLI GKGCMC 1 cut(s) 873
BstSNI TACGTA 1 cut(s) 343
BstUI CGCG 1 cut(s) 190
BstV1I GCAGC 2 cut(s) 334, 648
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 3 cut(s) 358, 1087, 1225
BstYI RGATCY 3 cut(s) 358, 1087, 1225
Bsu15I ATCGAT 1 cut(s) 25
BsuI GTATCC 1 cut(s) 546
BsuRI GGCC 4 cut(s) 331, 764, 871, 1263
BsuTUI ATCGAT 1 cut(s) 25
BtgZI GCGATG 1 cut(s) 387
BtsCI GGATG 1 cut(s) 264
BtsI GCAGTG 2 cut(s) 591, 1305
BtsIMutI CAGTG 6 cut(s) 358, 591, 702, 1146, 1305, 1500
Cac8I GCNNGC 5 cut(s) 206, 481, 1146, 1338, 1342
CaiI CAGNNNCTG 2 cut(s) 614, 920
CciI TCATGA 1 cut(s) 658
Cfr13I GGNCC 7 cut(s) 330, 723, 869, 870, 989, 1262, 1306
Cfr9I CCCGGG 1 cut(s) 109
ClaI ATCGAT 1 cut(s) 25
Csp6I GTAC 2 cut(s) 119, 818
CviAII CATG 6 cut(s) 480, 659, 810, 1451, 1455, 1512
CviQI GTAC 2 cut(s) 119, 818
DdeI CTNAG 1 cut(s) 843
DpnI GATC 8 cut(s) 133, 360, 558, 948, 1089, 1227, 1476, 1497
DpnII GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
Eam1104I CTCTTC 3 cut(s) 92, 228, 1258
EarI CTCTTC 3 cut(s) 92, 228, 1258
Ecl136II GAGCTC 1 cut(s) 168
Eco105I TACGTA 1 cut(s) 343
Eco130I CCWWGG 1 cut(s) 399
Eco147I AGGCCT 1 cut(s) 764
Eco24I GRGCYC 3 cut(s) 110, 170, 873
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 3 cut(s) 723, 989, 1306
Eco53kI GAGCTC 1 cut(s) 168
Eco57I CTGAAG 4 cut(s) 347, 672, 1215, 1481
Eco88I CYCGRG 1 cut(s) 109
EcoICRI GAGCTC 1 cut(s) 168
EcoO109I RGGNCCY 2 cut(s) 723, 870
EcoRI GAATTC 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 399
EcoT22I ATGCAT 2 cut(s) 32, 1456
EcoT38I GRGCYC 3 cut(s) 110, 170, 873
ErhI CCWWGG 1 cut(s) 399
FaeI CATG 6 cut(s) 483, 662, 813, 1454, 1458, 1515
FaqI GGGAC 1 cut(s) 709
FatI CATG 6 cut(s) 479, 658, 809, 1450, 1454, 1511
FauNDI CATATG 1 cut(s) 745
Fnu4HI GCNGC 2 cut(s) 348, 637
FokI GGATG 1 cut(s) 271
FriOI GRGCYC 3 cut(s) 110, 170, 873
Fsp4HI GCNGC 2 cut(s) 348, 637
FspBI CTAG 1 cut(s) 938
GluI GCNGC 2 cut(s) 348, 637
GsaI CCCAGC 2 cut(s) 723, 1520
HaeIII GGCC 4 cut(s) 331, 764, 871, 1263
HapII CCGG 3 cut(s) 110, 392, 1274
Hin1II CATG 6 cut(s) 483, 662, 813, 1454, 1458, 1515
HincII GTYRAC 1 cut(s) 912
HindII GTYRAC 1 cut(s) 912
HindIII AAGCTT 2 cut(s) 789, 1146
HinfI GANTC 7 cut(s) 136, 395, 590, 968, 1279, 1370, 1396
HpaII CCGG 3 cut(s) 110, 392, 1274
HphI GGTGA 2 cut(s) 680, 1288
Hpy166II GTNNAC 2 cut(s) 912, 989
Hpy188III TCNNGA 2 cut(s) 659, 1100
Hpy8I GTNNAC 2 cut(s) 912, 989
Hpy99I CGWCG 1 cut(s) 43
HpyAV CCTTC 7 cut(s) 132, 318, 665, 775, 1239, 1456, 1542
HpyCH4III ACNGT 5 cut(s) 212, 706, 1055, 1183, 1504
HpyCH4IV ACGT 1 cut(s) 342
HpyF10VI GCNNNNNNNGC 4 cut(s) 485, 620, 797, 1526
HpyF3I CTNAG 1 cut(s) 843
HpySE526I ACGT 1 cut(s) 342
Hsp92II CATG 6 cut(s) 483, 662, 813, 1454, 1458, 1515
KflI GGGWCCC 1 cut(s) 723
Kzo9I GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
LguI GCTCTTC 1 cut(s) 92
LmnI GCTCC 2 cut(s) 173, 1452
Lsp1109I GCAGC 2 cut(s) 334, 648
LweI GCATC 5 cut(s) 17, 249, 1079, 1227, 1375
MaeI CTAG 1 cut(s) 938
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 2 cut(s) 406, 1488
MalI GATC 8 cut(s) 133, 360, 558, 948, 1089, 1227, 1476, 1497
MboI GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
MfeI CAATTG 1 cut(s) 438
MflI RGATCY 3 cut(s) 358, 1087, 1225
MhlI GDGCHC 5 cut(s) 110, 158, 170, 297, 873
MlyI GAGTC 3 cut(s) 130, 1288, 1379
MmeI TCCRAC 2 cut(s) 1284, 1373
Mph1103I ATGCAT 2 cut(s) 32, 1456
MroXI GAANNNNTTC 2 cut(s) 360, 523
MseI TTAA 3 cut(s) 414, 452, 678
MslI CAYNNNNRTG 1 cut(s) 267
MspCI CTTAAG 1 cut(s) 413
MspI CCGG 3 cut(s) 110, 392, 1274
MspR9I CCNGG 2 cut(s) 110, 111
MunI CAATTG 1 cut(s) 438
MvnI CGCG 1 cut(s) 190
MwoI GCNNNNNNNGC 4 cut(s) 485, 620, 797, 1526
NciI CCSGG 2 cut(s) 110, 111
NdeI CATATG 1 cut(s) 745
NdeII GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
NlaIII CATG 6 cut(s) 483, 662, 813, 1454, 1458, 1515
NlaIV GGNNCC 6 cut(s) 724, 725, 861, 871, 872, 1089
NmeAIII GCCGAG 1 cut(s) 137
NsiI ATGCAT 2 cut(s) 32, 1456
NspI RCATGY 2 cut(s) 483, 1458
PaeI GCATGC 1 cut(s) 483
PagI TCATGA 1 cut(s) 658
PceI AGGCCT 1 cut(s) 764
PciSI GCTCTTC 1 cut(s) 92
PcsI WCGNNNNNNNCGW 1 cut(s) 131
PdmI GAANNNNTTC 2 cut(s) 360, 523
PfeI GAWTC 4 cut(s) 395, 590, 968, 1396
PflFI GACNNNGTC 1 cut(s) 704
PkrI GCNGC 2 cut(s) 349, 638
PleI GAGTC 3 cut(s) 130, 1287, 1378
PpsI GAGTC 3 cut(s) 130, 1287, 1378
Ppu21I YACGTR 1 cut(s) 343
PpuMI RGGWCCY 1 cut(s) 723
PsiI TTATAA 1 cut(s) 1016
Psp124BI GAGCTC 1 cut(s) 170
Psp5II RGGWCCY 1 cut(s) 723
PspFI CCCAGC 2 cut(s) 719, 1516
PspN4I GGNNCC 6 cut(s) 724, 725, 861, 871, 872, 1089
PspOMI GGGCCC 1 cut(s) 869
PspPI GGNCC 7 cut(s) 330, 723, 869, 870, 989, 1262, 1306
PspPPI RGGWCCY 1 cut(s) 723
PstNI CAGNNNCTG 2 cut(s) 614, 920
PsuI RGATCY 3 cut(s) 358, 1087, 1225
PsyI GACNNNGTC 1 cut(s) 704
RsaI GTAC 2 cut(s) 120, 819
RsaNI GTAC 2 cut(s) 119, 818
RseI CAYNNNNRTG 1 cut(s) 267
SacI GAGCTC 1 cut(s) 170
SapI GCTCTTC 1 cut(s) 92
SaqAI TTAA 3 cut(s) 414, 452, 678
SatI GCNGC 2 cut(s) 348, 637
Sau3AI GATC 8 cut(s) 131, 358, 556, 946, 1087, 1225, 1474, 1495
Sau96I GGNCC 7 cut(s) 330, 723, 869, 870, 989, 1262, 1306
SchI GAGTC 3 cut(s) 130, 1288, 1379
ScrFI CCNGG 2 cut(s) 110, 111
SduI GDGCHC 5 cut(s) 110, 158, 170, 297, 873
SfaNI GCATC 5 cut(s) 17, 249, 1079, 1227, 1375
SinI GGWCC 3 cut(s) 723, 989, 1306
SmaI CCCGGG 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 267
SmlI CTYRAG 2 cut(s) 413, 1257
SmoI CTYRAG 2 cut(s) 413, 1257
SnaBI TACGTA 1 cut(s) 343
SpeI ACTAGT 1 cut(s) 937
SphI GCATGC 1 cut(s) 483
SseBI AGGCCT 1 cut(s) 764
SsiI CCGC 2 cut(s) 67, 443
SspMI CTAG 1 cut(s) 938
SstI GAGCTC 1 cut(s) 170
StuI AGGCCT 1 cut(s) 764
StyD4I CCNGG 2 cut(s) 108, 109
StyI CCWWGG 1 cut(s) 399
TaaI ACNGT 5 cut(s) 212, 706, 1055, 1183, 1504
TaiI ACGT 1 cut(s) 345
TaqI TCGA 3 cut(s) 25, 134, 164
TatI WGTACW 1 cut(s) 817
TfiI GAWTC 4 cut(s) 395, 590, 968, 1396
Tru1I TTAA 3 cut(s) 414, 452, 678
Tru9I TTAA 3 cut(s) 414, 452, 678
TscAI CASTG 6 cut(s) 358, 591, 709, 1146, 1305, 1507
TseI GCWGC 2 cut(s) 347, 636
TspDTI ATGAA 5 cut(s) 326, 647, 675, 708, 1050
TspGWI ACGGA 1 cut(s) 376
TspMI CCCGGG 1 cut(s) 109
TspRI CASTG 6 cut(s) 358, 591, 709, 1146, 1305, 1507
Tth111I GACNNNGTC 1 cut(s) 704
Vha464I CTTAAG 1 cut(s) 413
VpaK11BI GGWCC 3 cut(s) 723, 989, 1306
XapI RAATTY 3 cut(s) 148, 523, 1390
XceI RCATGY 2 cut(s) 483, 1458
XmaI CCCGGG 1 cut(s) 109
XmnI GAANNNNTTC 2 cut(s) 360, 523
XspI CTAG 1 cut(s) 938
Zsp2I ATGCAT 2 cut(s) 32, 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.