Prupe.4G018500_v2.0.a1

The glycine cleavage system catalyzes the degradation of glycine

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
855949 .. 859126
3178 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G018500.3

Sequence Viewer

Length: 1227 bp
ATGAGAGGAGCGGGTTTGTGGCAACTTGGCCAGTCAATCACCCGACGCGTTGCTCAGGGTGATAAGAAGGCTGTAGCTCGCCGATACTTTGCCTCGGAAGCTGAGCTCAAAAAGACAGTTCTCTATGACTTCCATGTTGCTAATGGTGGAAAGATGGTGCCATTCGCTGGATGGGGCATGCCTATTCAGTATAAGGACTCAATCATGGACTCCACTCTAAACTGTAGGCAGAATGGTAGCCTGTTTGATGTCTCCCATATGTGTGGGCTAAGCCTAAAGGGGAAGGACTCCATTCCATTCCTTGAAAAGCTTGTCATTGCTGATGTTGCTGGACTTGCGCCTGGAACAGGGACCCTCACTGTCTTTACAAATGAGAAGGGAGGGTCAATCGATGACTCTGTGATTACCAAGGTTACCGACGACCATATATACCTGGTGGTGAATGCTGGATGTAGGGATAAAGATCTTGCTCACATTGAAGAGCATATGAAGGCATTCAAGGCTAAAGGGGGTGATGTCTCATGGCACATCCATGATGAGAGATCTCTTCTAGCTCTCCAGGGACCTCTTGCGGCTCCAACTCTCCAACACTTGACGAAAGAGGATTTGAGCAAGTTGTATTTTGGAGAGTTCCGAATTTTGGATATCAATGGGGCGCACTGCTTTCTCACAAGGACTGGGTACACTGGTGAAGATGGATTTGAAATTTCAGTTCCTTCTGAACATGCAGTGGATCTTGCCAAAGCAATCTTGGAAAAATCTGAGGGGAAGGTGAGGCTGACAGGATTGGGTGCTCGTGATAGTCTCCGGCTAGAAGCTGGGTTGTGTTTGTATGGCAATGATATGGAGCAACACGTAACACCTGTGGAGGCTGGACTCACATGGGCTATAGGGAAGAGGAGAAGAGCGGAAGGTGGCTTTCTTGGTGCTGAGGTGATACTCAAACAACTTGAGGAAGGTCCTTCAATCCGGCGTGCCGGTTTCATCTCTTCAGGCCCACCCGCTAGAAGCCACAGCGAGATTCAAAATGAAAAAGGTGAAACCATTGGGGAAGTCACAAGTGGAGGATTTAGCCCCTGCCTGAAGAAAAATATAGCCATGGGGTACGTGAAATCTGGATCACACAAGGCTGGCACCAAAGTTAAGATTATTGTCCGAGGAAAGGCCTACGATGGAACGGTCACAAAAATGCCATTCGTACCTACAAAATACTACAAGCCATCATAA

Protein Analysis

409

Amino Acids

44.3

Weight (kDa)

8.81

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 157, 1133
AccB7I CCANNNNNTGG 1 cut(s) 167
AccBSI CCGCTC 2 cut(s) 11, 908
AccII CGCG 1 cut(s) 48
AciI CCGC 4 cut(s) 11, 572, 908, 1002
AclWI GGATC 2 cut(s) 741, 1126
AcoI YGGCCR 1 cut(s) 28
AcsI RAATTY 2 cut(s) 636, 705
AcuI CTGAAG 2 cut(s) 975, 1103
AfaI GTAC 3 cut(s) 683, 1106, 1200
AfiI CCNNNNNNNGG 4 cut(s) 167, 347, 640, 1162
AflIII ACRYGT 2 cut(s) 46, 853
AgsI TTSAA 6 cut(s) 305, 479, 499, 704, 966, 1025
AjnI CCWGG 3 cut(s) 340, 432, 558
AluBI AGCT 6 cut(s) 77, 101, 106, 310, 554, 818
AluI AGCT 6 cut(s) 77, 101, 106, 310, 554, 818
Alw21I GWGCWC 2 cut(s) 108, 796
Alw26I GTCTC 3 cut(s) 256, 523, 809
AlwI GGATC 2 cut(s) 741, 1126
AoxI GGCC 3 cut(s) 28, 994, 1164
ApoI RAATTY 2 cut(s) 636, 705
Asp700I GAANNNNTTC 1 cut(s) 494
AspLEI GCGC 2 cut(s) 340, 658
AspS9I GGNCC 4 cut(s) 351, 563, 959, 995
AsuHPI GGTGA 8 cut(s) 31, 71, 451, 524, 701, 784, 946, 1049
AvaII GGWCC 3 cut(s) 351, 563, 959
BaeI ACNNNNGTAYC 2 cut(s) 673, 706
BalI TGGCCA 1 cut(s) 30
BanI GGYRCC 2 cut(s) 157, 1133
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 795
Bbv12I GWGCWC 2 cut(s) 108, 796
BbvCI CCTCAGC 1 cut(s) 930
BccI CCATC 4 cut(s) 148, 165, 689, 1166
BciT130I CCWGG 3 cut(s) 342, 434, 560
BcoDI GTCTC 3 cut(s) 256, 523, 809
BfaI CTAG 3 cut(s) 551, 812, 1005
BfmI CTRYAG 3 cut(s) 72, 223, 888
BglII AGATCT 2 cut(s) 463, 542
BisI GCNGC 1 cut(s) 573
BlpI GCTNAGC 2 cut(s) 102, 269
BlsI GCNGC 1 cut(s) 574
Bme1390I CCNGG 3 cut(s) 342, 434, 560
Bme18I GGWCC 3 cut(s) 351, 563, 959
BmgT120I GGNCC 4 cut(s) 351, 563, 959, 995
BmiI GGNNCC 6 cut(s) 159, 352, 353, 564, 576, 1135
BmrFI CCNGG 3 cut(s) 342, 434, 560
BmrI ACTGGG 1 cut(s) 687
BmuI ACTGGG 1 cut(s) 687
BpmI CTGGAG 1 cut(s) 542
Bpu10I CCTNAGC 2 cut(s) 54, 930
Bpu1102I GCTNAGC 2 cut(s) 102, 269
BpuEI CTTGAG 1 cut(s) 971
Bsa29I ATCGAT 1 cut(s) 390
BsaAI YACGTR 2 cut(s) 856, 1108
BsaBI GATNNNNATC 1 cut(s) 462
BsaJI CCNNGG 5 cut(s) 93, 408, 559, 1098, 1156
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 347, 640, 1162
Bse118I RCCGGY 1 cut(s) 977
Bse1I ACTGG 3 cut(s) 31, 682, 691
Bse3DI GCAATG 2 cut(s) 315, 844
Bse8I GATNNNNATC 1 cut(s) 462
BseBI CCWGG 3 cut(s) 342, 434, 560
BseCI ATCGAT 1 cut(s) 390
BseDI CCNNGG 5 cut(s) 93, 408, 559, 1098, 1156
BseGI GGATG 3 cut(s) 176, 455, 528
BseJI GATNNNNATC 1 cut(s) 462
BseLI CCNNNNNNNGG 4 cut(s) 167, 347, 640, 1162
BseMI GCAATG 2 cut(s) 315, 844
BseMII CTCAG 4 cut(s) 68, 93, 753, 921
BseNI ACTGG 3 cut(s) 31, 682, 691
BseRI GAGGAG 2 cut(s) 21, 913
BseYI CCCAGC 1 cut(s) 818
Bsh1236I CGCG 1 cut(s) 48
BshFI GGCC 3 cut(s) 30, 996, 1166
BshNI GGYRCC 2 cut(s) 157, 1133
BshVI ATCGAT 1 cut(s) 390
BsiHKAI GWGCWC 2 cut(s) 108, 796
BsiSI CCGG 3 cut(s) 808, 970, 978
BslFI GGGAC 2 cut(s) 364, 576
BslI CCNNNNNNNGG 4 cut(s) 167, 347, 640, 1162
BsmAI GTCTC 3 cut(s) 256, 523, 809
BsmFI GGGAC 2 cut(s) 364, 576
BsmI GAATGC 2 cut(s) 448, 494
BsnI GGCC 3 cut(s) 30, 996, 1166
Bsp1286I GDGCHC 2 cut(s) 108, 796
Bsp143I GATC 4 cut(s) 463, 542, 733, 1118
Bsp1720I GCTNAGC 2 cut(s) 102, 269
Bsp19I CCATGG 1 cut(s) 1098
BspACI CCGC 4 cut(s) 11, 572, 908, 1002
BspANI GGCC 3 cut(s) 30, 996, 1166
BspCNI CTCAG 4 cut(s) 67, 94, 754, 922
BspDI ATCGAT 1 cut(s) 390
BspFNI CGCG 1 cut(s) 48
BspLI GGNNCC 6 cut(s) 159, 352, 353, 564, 576, 1135
BspPI GGATC 2 cut(s) 741, 1126
BspQI GCTCTTC 2 cut(s) 474, 898
BspT107I GGYRCC 2 cut(s) 157, 1133
BsrBI CCGCTC 2 cut(s) 11, 908
BsrDI GCAATG 2 cut(s) 315, 844
BsrFI RCCGGY 1 cut(s) 977
BsrI ACTGG 3 cut(s) 31, 682, 691
BssAI RCCGGY 1 cut(s) 977
BssECI CCNNGG 5 cut(s) 93, 408, 559, 1098, 1156
BssMI GATC 4 cut(s) 463, 542, 733, 1118
BssSI CACGAG 1 cut(s) 795
BssT1I CCWWGG 2 cut(s) 408, 1098
Bst2BI CACGAG 1 cut(s) 795
Bst2UI CCWGG 3 cut(s) 342, 434, 560
Bst4CI ACNGT 4 cut(s) 118, 224, 361, 1180
Bst6I CTCTTC 5 cut(s) 474, 552, 890, 898, 994
BstBAI YACGTR 2 cut(s) 856, 1108
BstC8I GCNNGC 4 cut(s) 79, 179, 975, 1132
BstDEI CTNAG 5 cut(s) 54, 102, 269, 762, 930
BstDSI CCRYGG 1 cut(s) 1098
BstEII GGTNACC 1 cut(s) 412
BstENI CCTNNNNNAGG 1 cut(s) 345
BstF5I GGATG 3 cut(s) 176, 455, 528
BstFNI CGCG 1 cut(s) 48
BstHHI GCGC 2 cut(s) 340, 658
BstKTI GATC 4 cut(s) 466, 545, 736, 1121
BstMAI GTCTC 3 cut(s) 256, 523, 809
BstMBI GATC 4 cut(s) 463, 542, 733, 1118
BstMWI GCNNNNNNNGC 4 cut(s) 98, 326, 335, 500
BstNI CCWGG 3 cut(s) 342, 434, 560
BstNSI RCATGY 2 cut(s) 181, 728
BstPI GGTNACC 1 cut(s) 412
BstSCI CCNGG 3 cut(s) 340, 432, 558
BstSFI CTRYAG 3 cut(s) 72, 223, 888
BstUI CGCG 1 cut(s) 48
BstX2I RGATCY 3 cut(s) 463, 542, 733
BstXI CCANNNNNNTGG 1 cut(s) 263
BstYI RGATCY 3 cut(s) 463, 542, 733
Bsu15I ATCGAT 1 cut(s) 390
BsuRI GGCC 3 cut(s) 30, 996, 1166
BsuTUI ATCGAT 1 cut(s) 390
BtgI CCRYGG 1 cut(s) 1098
BtsCI GGATG 3 cut(s) 176, 455, 528
BtsI GCAGTG 2 cut(s) 658, 735
BtsIMutI CAGTG 4 cut(s) 357, 658, 684, 735
Cac8I GCNNGC 4 cut(s) 79, 179, 975, 1132
CfoI GCGC 2 cut(s) 340, 658
Cfr10I RCCGGY 1 cut(s) 977
Cfr13I GGNCC 4 cut(s) 351, 563, 959, 995
ClaI ATCGAT 1 cut(s) 390
CseI GACGC 1 cut(s) 54
CsiI ACCWGGT 1 cut(s) 432
Csp6I GTAC 3 cut(s) 682, 1105, 1199
CviAII CATG 8 cut(s) 134, 178, 205, 522, 533, 725, 882, 1099
CviQI GTAC 3 cut(s) 682, 1105, 1199
DdeI CTNAG 5 cut(s) 54, 102, 269, 762, 930
DpnI GATC 4 cut(s) 465, 544, 735, 1120
DpnII GATC 4 cut(s) 463, 542, 733, 1118
EaeI YGGCCR 1 cut(s) 28
Eam1104I CTCTTC 5 cut(s) 474, 552, 890, 898, 994
EarI CTCTTC 5 cut(s) 474, 552, 890, 898, 994
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 2 cut(s) 408, 1098
Eco147I AGGCCT 1 cut(s) 1166
Eco24I GRGCYC 1 cut(s) 108
Eco32I GATATC 1 cut(s) 646
Eco47I GGWCC 3 cut(s) 351, 563, 959
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 2 cut(s) 975, 1103
Eco91I GGTNACC 1 cut(s) 412
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 1 cut(s) 345
EcoO109I RGGNCCY 3 cut(s) 351, 563, 959
EcoO65I GGTNACC 1 cut(s) 412
EcoRII CCWGG 3 cut(s) 340, 432, 558
EcoRV GATATC 1 cut(s) 646
EcoT14I CCWWGG 2 cut(s) 408, 1098
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 2 cut(s) 408, 1098
FaeI CATG 8 cut(s) 137, 181, 208, 525, 536, 728, 885, 1102
FaqI GGGAC 2 cut(s) 364, 576
FatI CATG 8 cut(s) 133, 177, 204, 521, 532, 724, 881, 1098
FauI CCCGC 2 cut(s) 4, 1009
FauNDI CATATG 2 cut(s) 258, 486
Fnu4HI GCNGC 1 cut(s) 573
FokI GGATG 3 cut(s) 183, 462, 515
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 573
FspBI CTAG 3 cut(s) 551, 812, 1005
GlaI GCGC 2 cut(s) 339, 657
GluI GCNGC 1 cut(s) 573
GsaI CCCAGC 1 cut(s) 822
GsuI CTGGAG 1 cut(s) 542
HaeIII GGCC 3 cut(s) 30, 996, 1166
HapII CCGG 3 cut(s) 808, 970, 978
HgaI GACGC 1 cut(s) 54
HhaI GCGC 2 cut(s) 340, 658
Hin1II CATG 8 cut(s) 137, 181, 208, 525, 536, 728, 885, 1102
Hin6I GCGC 2 cut(s) 338, 656
HinP1I GCGC 2 cut(s) 338, 656
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 6 cut(s) 197, 209, 287, 395, 876, 1021
HpaII CCGG 3 cut(s) 808, 970, 978
HphI GGTGA 8 cut(s) 31, 71, 451, 524, 701, 784, 946, 1049
Hpy166II GTNNAC 1 cut(s) 684
Hpy188I TCNGA 5 cut(s) 97, 635, 721, 763, 1157
Hpy188III TCNNGA 2 cut(s) 797, 1116
Hpy8I GTNNAC 1 cut(s) 684
Hpy99I CGWCG 2 cut(s) 48, 422
HpyAV CCTTC 9 cut(s) 61, 277, 370, 484, 726, 763, 905, 950, 972
HpyCH4III ACNGT 4 cut(s) 118, 224, 361, 1180
HpyCH4IV ACGT 2 cut(s) 855, 1107
HpyCH4V TGCA 1 cut(s) 728
HpyF10VI GCNNNNNNNGC 4 cut(s) 98, 326, 335, 500
HpyF3I CTNAG 5 cut(s) 54, 102, 269, 762, 930
HpySE526I ACGT 2 cut(s) 855, 1107
Hsp92II CATG 8 cut(s) 137, 181, 208, 525, 536, 728, 885, 1102
HspAI GCGC 2 cut(s) 338, 656
KflI GGGWCCC 1 cut(s) 351
Kzo9I GATC 4 cut(s) 463, 542, 733, 1118
LguI GCTCTTC 2 cut(s) 474, 898
LmnI GCTCC 3 cut(s) 8, 580, 847
MabI ACCWGGT 1 cut(s) 432
MaeI CTAG 3 cut(s) 551, 812, 1005
MaeII ACGT 2 cut(s) 855, 1107
MaeIII GTNAC 4 cut(s) 412, 856, 1054, 1180
MalI GATC 4 cut(s) 465, 544, 735, 1120
MbiI CCGCTC 2 cut(s) 11, 908
MboI GATC 4 cut(s) 463, 542, 733, 1118
MboII GAAGA 7 cut(s) 491, 539, 704, 907, 915, 981, 1096
MflI RGATCY 3 cut(s) 463, 542, 733
MhlI GDGCHC 2 cut(s) 108, 796
MlsI TGGCCA 1 cut(s) 30
MluCI AATT 2 cut(s) 636, 705
MluI ACGCGT 1 cut(s) 46
MluNI TGGCCA 1 cut(s) 30
MlyI GAGTC 5 cut(s) 191, 203, 281, 389, 870
MmeI TCCRAC 2 cut(s) 602, 610
Mox20I TGGCCA 1 cut(s) 30
MroXI GAANNNNTTC 1 cut(s) 494
MscI TGGCCA 1 cut(s) 30
MseI TTAA 1 cut(s) 1143
MslI CAYNNNNRTG 3 cut(s) 261, 531, 1187
Msp20I TGGCCA 1 cut(s) 30
MspI CCGG 3 cut(s) 808, 970, 978
MspR9I CCNGG 3 cut(s) 342, 434, 560
Mva1269I GAATGC 2 cut(s) 448, 494
MvaI CCWGG 3 cut(s) 342, 434, 560
MvnI CGCG 1 cut(s) 48
MwoI GCNNNNNNNGC 4 cut(s) 98, 326, 335, 500
NcoI CCATGG 1 cut(s) 1098
NdeI CATATG 2 cut(s) 258, 486
NdeII GATC 4 cut(s) 463, 542, 733, 1118
NlaIII CATG 8 cut(s) 137, 181, 208, 525, 536, 728, 885, 1102
NlaIV GGNNCC 6 cut(s) 159, 352, 353, 564, 576, 1135
NmuCI GTSAC 2 cut(s) 1054, 1180
NspI RCATGY 2 cut(s) 181, 728
PaeI GCATGC 1 cut(s) 181
PceI AGGCCT 1 cut(s) 1166
PciSI GCTCTTC 2 cut(s) 474, 898
PctI GAATGC 2 cut(s) 448, 494
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 1 cut(s) 1021
PflMI CCANNNNNTGG 1 cut(s) 167
PkrI GCNGC 1 cut(s) 574
PleI GAGTC 5 cut(s) 191, 203, 281, 389, 870
PpsI GAGTC 5 cut(s) 191, 203, 281, 389, 870
Ppu21I YACGTR 2 cut(s) 856, 1108
PpuMI RGGWCCY 3 cut(s) 351, 563, 959
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 3 cut(s) 351, 563, 959
Psp6I CCWGG 3 cut(s) 340, 432, 558
PspEI GGTNACC 1 cut(s) 412
PspFI CCCAGC 1 cut(s) 818
PspGI CCWGG 3 cut(s) 340, 432, 558
PspN4I GGNNCC 6 cut(s) 159, 352, 353, 564, 576, 1135
PspPI GGNCC 4 cut(s) 351, 563, 959, 995
PspPPI RGGWCCY 3 cut(s) 351, 563, 959
PsuI RGATCY 3 cut(s) 463, 542, 733
RsaI GTAC 3 cut(s) 683, 1106, 1200
RsaNI GTAC 3 cut(s) 682, 1105, 1199
RseI CAYNNNNRTG 3 cut(s) 261, 531, 1187
SacI GAGCTC 1 cut(s) 108
SapI GCTCTTC 2 cut(s) 474, 898
SaqAI TTAA 1 cut(s) 1143
SatI GCNGC 1 cut(s) 573
Sau3AI GATC 4 cut(s) 463, 542, 733, 1118
Sau96I GGNCC 4 cut(s) 351, 563, 959, 995
SchI GAGTC 5 cut(s) 191, 203, 281, 389, 870
ScrFI CCNGG 3 cut(s) 342, 434, 560
SduI GDGCHC 2 cut(s) 108, 796
SexAI ACCWGGT 1 cut(s) 432
SfcI CTRYAG 3 cut(s) 72, 223, 888
SinI GGWCC 3 cut(s) 351, 563, 959
SmiMI CAYNNNNRTG 3 cut(s) 261, 531, 1187
SmlI CTYRAG 1 cut(s) 950
SmoI CTYRAG 1 cut(s) 950
SphI GCATGC 1 cut(s) 181
Sse9I AATT 2 cut(s) 636, 705
SseBI AGGCCT 1 cut(s) 1166
SsiI CCGC 4 cut(s) 11, 572, 908, 1002
SspMI CTAG 3 cut(s) 551, 812, 1005
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 1 cut(s) 1166
StyD4I CCNGG 3 cut(s) 340, 432, 558
StyI CCWWGG 2 cut(s) 408, 1098
TaaI ACNGT 4 cut(s) 118, 224, 361, 1180
TaiI ACGT 2 cut(s) 858, 1110
TaqI TCGA 1 cut(s) 390
TasI AATT 2 cut(s) 636, 705
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 1 cut(s) 1021
Tru1I TTAA 1 cut(s) 1143
Tru9I TTAA 1 cut(s) 1143
TscAI CASTG 4 cut(s) 364, 665, 691, 735
TseFI GTSAC 2 cut(s) 1054, 1180
Tsp45I GTSAC 2 cut(s) 1054, 1180
TspDTI ATGAA 3 cut(s) 503, 973, 1044
TspRI CASTG 4 cut(s) 364, 665, 691, 735
Van91I CCANNNNNTGG 1 cut(s) 167
VpaK11BI GGWCC 3 cut(s) 351, 563, 959
XagI CCTNNNNNAGG 1 cut(s) 345
XapI RAATTY 2 cut(s) 636, 705
XceI RCATGY 2 cut(s) 181, 728
XcmI CCANNNNNNNNNTGG 3 cut(s) 140, 168, 748
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 3 cut(s) 551, 812, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.