Rh5CG023700

The glycine cleavage system catalyzes the degradation of glycine

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
1498736 .. 1502193
3458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG023700.1

Sequence Viewer

Length: 1227 bp
ATGAGAGGAGGTGGTTTGTGGCAGCTTGGTCAGTCAATCACCCGACGCCTTGCTCAGGGTGATAAGAAGGGTGTAGCTCGTCGATACTTTGCCTCTGAAGCTGAGCTCAAAAAGACAGTTCTTTATGACTTCCACGTCGCTCATGGTGGGAAGATGGTGCCATTTGCCGGATGGGGCATGCCTATTCAGTATAAGGACTCAATTATGGACTCCACTGTGAACTGTAGGGAGAACGGTGGGCTTTTTGATGTCTCCCATATGTGTGGGCTGAGCCTCAAGGGGAAGGACTCCATTCCATTCCTGGAAAAGCTCGTCATAGCTGATGTTGCTGGTCTGGTCCCCGGAACGGGGACACTAACTGTCTTTACAAATGAGAAGGGAGGGGCAATTGATGACTCTGTGGTTACCAAGGTCACTGATGACCACATATACCTGGTGGTGAATGCTGGATGTAGGGATAAGGATTTGGCTCACATTGAGGAGCACATGAAGGCATTCAAGGCCAAAGGGGGAGACGTCTCATGGCACATCCATGATGAGAGATCTCTTCTAGCTCTTCAGGGTCCTCTTGCTGCCCCAACTCTTCAACACTTGACAAAAGAGGATTTGAGCAAGATTTATTTCGGAGAGTTCCGAATTTTGGATATCAATGGGGCACACTGCTTTCTCACAAGGACTGGATACACTGGTGAAGATGGATTCGAAATCTCAGTCCCTGATGAGAATGCGTTGGATCTTGCCAAAGCAATCTTGGAGAAATCTGAGGGGAAGGTGAGGCTGACTGGATTGGGAGCTCGTGATAGTCTCCGACTGGAAGCTGGTTTGTGTTTATATGGCAATGATATGGAGCAACACATAACACCAGTGGAGGCTGGGCTCACATGGGCTATAGGCAAGAGAAGAAGGGCAGAAGGTGGCTTTCTCGGAGCTGAGACAATTCTCAAGCAACTTGCTGATGGTCCTTCCATCAGGCGTGCTGGTTTCATCTCTTCAGGCCCACCTGCTAGAGGCCACAGCGAGATTCAGAATGAGAAAGGCGAAACCATTGGGGAAGTGACAAGTGGAGGATTCAGCCCTTGCCTGAAGAAAAATATCGCTATGGGGTATGTAAAATCTGGAAACCACAAGGCCGGAACCAAAGTGAAGATTGTTGTGCGAGGAAAGGCCTATGATGGAACTGTCACTAAAATGCCTTTTGTACCAACAAAATACTACAAGCCAACTTAA

Protein Analysis

408

Amino Acids

44.22

Weight (kDa)

8.69

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GCV_T PF01571 41 - 299 1.7e-72 GCVT N-terminal domain
GCV_T_C PF08669 327 - 400 3.5e-19 Glycine cleavage T-protein C-terminal barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1009
AasI GACNNNNNNGTC 1 cut(s) 134
AatII GACGTC 1 cut(s) 519
Acc36I ACCTGC 1 cut(s) 1009
AccB1I GGYRCC 1 cut(s) 157
AclWI GGATC 1 cut(s) 741
AcsI RAATTY 1 cut(s) 636
AcuI CTGAAG 4 cut(s) 117, 542, 975, 1103
AcyI GRCGYC 2 cut(s) 46, 516
AfaI GTAC 1 cut(s) 1200
AfiI CCNNNNNNNGG 7 cut(s) 55, 167, 346, 347, 348, 640, 1007
AgsI TTSAA 2 cut(s) 499, 587
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 2 cut(s) 300, 432
Alw21I GWGCWC 3 cut(s) 108, 486, 796
Alw26I GTCTC 5 cut(s) 256, 507, 523, 809, 926
AlwI GGATC 1 cut(s) 741
AlwNI CAGNNNCTG 1 cut(s) 716
AoxI GGCC 5 cut(s) 501, 994, 1009, 1128, 1164
ApeKI GCWGC 2 cut(s) 22, 572
ApoI RAATTY 1 cut(s) 636
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
Asp700I GAANNNNTTC 1 cut(s) 494
AspS9I GGNCC 4 cut(s) 337, 563, 959, 995
AsuC2I CCSGG 1 cut(s) 342
AsuHPI GGTGA 5 cut(s) 31, 71, 451, 701, 784
AsuII TTCGAA 1 cut(s) 702
AvaII GGWCC 3 cut(s) 337, 563, 959
BaeGI GKGCMC 1 cut(s) 658
BaeI ACNNNNGTAYC 2 cut(s) 673, 706
BanI GGYRCC 1 cut(s) 157
BanII GRGCYC 3 cut(s) 108, 796, 879
BauI CACGAG 1 cut(s) 795
Bbv12I GWGCWC 3 cut(s) 108, 486, 796
BbvI GCAGC 2 cut(s) 34, 559
BccI CCATC 6 cut(s) 148, 165, 689, 950, 974, 1166
BciT130I CCWGG 2 cut(s) 302, 434
BciVI GTATCC 1 cut(s) 674
BcnI CCSGG 1 cut(s) 342
BcoDI GTCTC 5 cut(s) 256, 507, 523, 809, 926
BfaI CTAG 2 cut(s) 551, 1005
BfmI CTRYAG 2 cut(s) 223, 888
BfuAI ACCTGC 1 cut(s) 1009
BfuI GTATCC 1 cut(s) 674
BglII AGATCT 1 cut(s) 542
BisI GCNGC 2 cut(s) 23, 573
BlpI GCTNAGC 2 cut(s) 102, 269
BlsI GCNGC 2 cut(s) 24, 574
Bme1390I CCNGG 3 cut(s) 302, 342, 434
Bme18I GGWCC 3 cut(s) 337, 563, 959
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 4 cut(s) 337, 563, 959, 995
BmiI GGNNCC 4 cut(s) 159, 339, 564, 1135
BmrFI CCNGG 3 cut(s) 302, 342, 434
Bpu10I CCTNAGC 1 cut(s) 54
Bpu1102I GCTNAGC 2 cut(s) 102, 269
Bpu14I TTCGAA 1 cut(s) 702
BpuEI CTTGAG 2 cut(s) 260, 926
BpuMI CCSGG 1 cut(s) 342
BsaHI GRCGYC 2 cut(s) 46, 516
BsaJI CCNNGG 2 cut(s) 340, 408
Bsc4I CCNNNNNNNGG 7 cut(s) 55, 167, 346, 347, 348, 640, 1007
Bse1I ACTGG 5 cut(s) 682, 691, 787, 816, 863
Bse3DI GCAATG 1 cut(s) 844
BseBI CCWGG 2 cut(s) 302, 434
BseDI CCNNGG 2 cut(s) 340, 408
BseGI GGATG 3 cut(s) 176, 455, 528
BseLI CCNNNNNNNGG 7 cut(s) 55, 167, 346, 347, 348, 640, 1007
BseMI GCAATG 1 cut(s) 844
BseMII CTCAG 6 cut(s) 68, 93, 260, 723, 753, 921
BseNI ACTGG 5 cut(s) 682, 691, 787, 816, 863
BseRI GAGGAG 2 cut(s) 21, 494
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 2 cut(s) 34, 559
BseYI CCCAGC 1 cut(s) 872
BshFI GGCC 5 cut(s) 503, 996, 1011, 1130, 1166
BshNI GGYRCC 1 cut(s) 157
BsiHKAI GWGCWC 3 cut(s) 108, 486, 796
BsiSI CCGG 3 cut(s) 168, 342, 1131
BslFI GGGAC 3 cut(s) 323, 364, 698
BslI CCNNNNNNNGG 7 cut(s) 55, 167, 346, 347, 348, 640, 1007
BsmAI GTCTC 5 cut(s) 256, 507, 523, 809, 926
BsmBI CGTCTC 2 cut(s) 507, 523
BsmFI GGGAC 3 cut(s) 323, 364, 698
BsmI GAATGC 3 cut(s) 448, 494, 730
BsnI GGCC 5 cut(s) 503, 996, 1011, 1130, 1166
Bsp119I TTCGAA 1 cut(s) 702
Bsp1286I GDGCHC 5 cut(s) 108, 486, 658, 796, 879
Bsp143I GATC 2 cut(s) 542, 733
Bsp1720I GCTNAGC 2 cut(s) 102, 269
BspANI GGCC 5 cut(s) 503, 996, 1011, 1130, 1166
BspCNI CTCAG 6 cut(s) 67, 94, 261, 722, 754, 922
BspLI GGNNCC 4 cut(s) 159, 339, 564, 1135
BspMI ACCTGC 1 cut(s) 1009
BspPI GGATC 1 cut(s) 741
BspQI GCTCTTC 1 cut(s) 561
BspT104I TTCGAA 1 cut(s) 702
BspT107I GGYRCC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 844
BsrI ACTGG 5 cut(s) 682, 691, 787, 816, 863
BssECI CCNNGG 2 cut(s) 340, 408
BssMI GATC 2 cut(s) 542, 733
BssNI GRCGYC 2 cut(s) 46, 516
BssSI CACGAG 1 cut(s) 795
BssT1I CCWWGG 1 cut(s) 408
Bst2BI CACGAG 1 cut(s) 795
Bst2UI CCWGG 2 cut(s) 302, 434
Bst4CI ACNGT 6 cut(s) 118, 217, 224, 236, 361, 1180
Bst6I CTCTTC 4 cut(s) 552, 561, 588, 994
BstACI GRCGYC 2 cut(s) 46, 516
BstBI TTCGAA 1 cut(s) 702
BstC8I GCNNGC 2 cut(s) 179, 975
BstDEI CTNAG 6 cut(s) 54, 102, 269, 709, 762, 930
BstEII GGTNACC 1 cut(s) 403
BstENI CCTNNNNNAGG 2 cut(s) 53, 1005
BstF5I GGATG 3 cut(s) 176, 455, 528
BstKTI GATC 2 cut(s) 545, 736
BstMAI GTCTC 5 cut(s) 256, 507, 523, 809, 926
BstMBI GATC 2 cut(s) 542, 733
BstMWI GCNNNNNNNGC 3 cut(s) 98, 326, 500
BstNI CCWGG 2 cut(s) 302, 434
BstNSI RCATGY 1 cut(s) 181
BstPI GGTNACC 1 cut(s) 403
BstSCI CCNGG 3 cut(s) 300, 340, 432
BstSFI CTRYAG 2 cut(s) 223, 888
BstSLI GKGCMC 1 cut(s) 658
BstV1I GCAGC 2 cut(s) 34, 559
BstX2I RGATCY 2 cut(s) 542, 733
BstXI CCANNNNNNTGG 1 cut(s) 263
BstYI RGATCY 2 cut(s) 542, 733
BsuI GTATCC 1 cut(s) 674
BsuRI GGCC 5 cut(s) 503, 996, 1011, 1130, 1166
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 3 cut(s) 176, 455, 528
BtsI GCAGTG 1 cut(s) 658
BtsIMutI CAGTG 5 cut(s) 213, 414, 658, 684, 870
BveI ACCTGC 1 cut(s) 1009
Cac8I GCNNGC 2 cut(s) 179, 975
CaiI CAGNNNCTG 1 cut(s) 716
Cfr13I GGNCC 4 cut(s) 337, 563, 959, 995
CseI GACGC 1 cut(s) 54
CsiI ACCWGGT 1 cut(s) 432
Csp6I GTAC 1 cut(s) 1199
CviAII CATG 6 cut(s) 143, 178, 487, 522, 533, 882
CviQI GTAC 1 cut(s) 1199
DdeI CTNAG 6 cut(s) 54, 102, 269, 709, 762, 930
DpnI GATC 2 cut(s) 544, 735
DpnII GATC 2 cut(s) 542, 733
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
Eam1104I CTCTTC 4 cut(s) 552, 561, 588, 994
EarI CTCTTC 4 cut(s) 552, 561, 588, 994
Ecl136II GAGCTC 2 cut(s) 106, 794
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 1166
Eco24I GRGCYC 3 cut(s) 108, 796, 879
Eco32I GATATC 1 cut(s) 646
Eco47I GGWCC 3 cut(s) 337, 563, 959
Eco53kI GAGCTC 2 cut(s) 106, 794
Eco57I CTGAAG 4 cut(s) 117, 542, 975, 1103
Eco91I GGTNACC 1 cut(s) 403
EcoICRI GAGCTC 2 cut(s) 106, 794
EcoNI CCTNNNNNAGG 2 cut(s) 53, 1005
EcoO109I RGGNCCY 1 cut(s) 563
EcoO65I GGTNACC 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 300, 432
EcoRV GATATC 1 cut(s) 646
EcoT14I CCWWGG 1 cut(s) 408
EcoT38I GRGCYC 3 cut(s) 108, 796, 879
ErhI CCWWGG 1 cut(s) 408
Esp3I CGTCTC 2 cut(s) 507, 523
FaeI CATG 6 cut(s) 146, 181, 490, 525, 536, 885
FaqI GGGAC 3 cut(s) 323, 364, 698
FatI CATG 6 cut(s) 142, 177, 486, 521, 532, 881
FauNDI CATATG 1 cut(s) 258
Fnu4HI GCNGC 2 cut(s) 23, 573
FokI GGATG 3 cut(s) 183, 462, 515
FriOI GRGCYC 3 cut(s) 108, 796, 879
Fsp4HI GCNGC 2 cut(s) 23, 573
FspBI CTAG 2 cut(s) 551, 1005
GluI GCNGC 2 cut(s) 23, 573
GsaI CCCAGC 1 cut(s) 876
HaeIII GGCC 5 cut(s) 503, 996, 1011, 1130, 1166
HapII CCGG 3 cut(s) 168, 342, 1131
HgaI GACGC 1 cut(s) 54
Hin1I GRCGYC 2 cut(s) 46, 516
Hin1II CATG 6 cut(s) 146, 181, 490, 525, 536, 885
HinfI GANTC 7 cut(s) 197, 209, 287, 395, 699, 1021, 1068
HpaII CCGG 3 cut(s) 168, 342, 1131
HphI GGTGA 5 cut(s) 31, 71, 451, 701, 784
Hpy166II GTNNAC 1 cut(s) 220
Hpy188I TCNGA 7 cut(s) 97, 626, 635, 763, 809, 926, 1026
Hpy188III TCNNGA 2 cut(s) 797, 1116
Hpy8I GTNNAC 1 cut(s) 220
Hpy99I CGWCG 3 cut(s) 48, 84, 140
HpyAV CCTTC 8 cut(s) 61, 277, 370, 484, 763, 897, 905, 972
HpyCH4III ACNGT 6 cut(s) 118, 217, 224, 236, 361, 1180
HpyCH4IV ACGT 2 cut(s) 135, 516
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 326, 500
HpyF3I CTNAG 6 cut(s) 54, 102, 269, 709, 762, 930
HpySE526I ACGT 2 cut(s) 135, 516
Hsp92I GRCGYC 2 cut(s) 46, 516
Hsp92II CATG 6 cut(s) 146, 181, 490, 525, 536, 885
Kzo9I GATC 2 cut(s) 542, 733
LguI GCTCTTC 1 cut(s) 561
LmnI GCTCC 4 cut(s) 481, 791, 847, 926
Lsp1109I GCAGC 2 cut(s) 34, 559
MabI ACCWGGT 1 cut(s) 432
MaeI CTAG 2 cut(s) 551, 1005
MaeII ACGT 2 cut(s) 135, 516
MaeIII GTNAC 4 cut(s) 403, 412, 1054, 1180
MalI GATC 2 cut(s) 544, 735
MboI GATC 2 cut(s) 542, 733
MboII GAAGA 9 cut(s) 163, 539, 548, 575, 704, 912, 981, 1096, 1156
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 2 cut(s) 542, 733
MhlI GDGCHC 5 cut(s) 108, 486, 658, 796, 879
MluCI AATT 4 cut(s) 201, 387, 636, 936
MlyI GAGTC 4 cut(s) 191, 203, 281, 389
MmeI TCCRAC 2 cut(s) 711, 832
MroXI GAANNNNTTC 1 cut(s) 494
MseI TTAA 1 cut(s) 1225
MslI CAYNNNNRTG 3 cut(s) 261, 531, 1187
MspI CCGG 3 cut(s) 168, 342, 1131
MspR9I CCNGG 3 cut(s) 302, 342, 434
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 3 cut(s) 448, 494, 730
MvaI CCWGG 2 cut(s) 302, 434
MwoI GCNNNNNNNGC 3 cut(s) 98, 326, 500
NciI CCSGG 1 cut(s) 342
NdeI CATATG 1 cut(s) 258
NdeII GATC 2 cut(s) 542, 733
NlaIII CATG 6 cut(s) 146, 181, 490, 525, 536, 885
NlaIV GGNNCC 4 cut(s) 159, 339, 564, 1135
NmuCI GTSAC 3 cut(s) 412, 1054, 1180
NspI RCATGY 1 cut(s) 181
NspV TTCGAA 1 cut(s) 702
PaeI GCATGC 1 cut(s) 181
PaqCI CACCTGC 1 cut(s) 1009
PceI AGGCCT 1 cut(s) 1166
PciSI GCTCTTC 1 cut(s) 561
PctI GAATGC 3 cut(s) 448, 494, 730
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 3 cut(s) 699, 1021, 1068
PfoI TCCNGGA 1 cut(s) 300
PkrI GCNGC 2 cut(s) 24, 574
PleI GAGTC 4 cut(s) 191, 203, 281, 389
PpsI GAGTC 4 cut(s) 191, 203, 281, 389
PpuMI RGGWCCY 1 cut(s) 563
Psp124BI GAGCTC 2 cut(s) 108, 796
Psp5II RGGWCCY 1 cut(s) 563
Psp6I CCWGG 2 cut(s) 300, 432
PspEI GGTNACC 1 cut(s) 403
PspFI CCCAGC 1 cut(s) 872
PspGI CCWGG 2 cut(s) 300, 432
PspN4I GGNNCC 4 cut(s) 159, 339, 564, 1135
PspPI GGNCC 4 cut(s) 337, 563, 959, 995
PspPPI RGGWCCY 1 cut(s) 563
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 2 cut(s) 542, 733
RsaI GTAC 1 cut(s) 1200
RsaNI GTAC 1 cut(s) 1199
RseI CAYNNNNRTG 3 cut(s) 261, 531, 1187
SacI GAGCTC 2 cut(s) 108, 796
SapI GCTCTTC 1 cut(s) 561
SaqAI TTAA 1 cut(s) 1225
SatI GCNGC 2 cut(s) 23, 573
Sau3AI GATC 2 cut(s) 542, 733
Sau96I GGNCC 4 cut(s) 337, 563, 959, 995
SchI GAGTC 4 cut(s) 191, 203, 281, 389
ScrFI CCNGG 3 cut(s) 302, 342, 434
SduI GDGCHC 5 cut(s) 108, 486, 658, 796, 879
SexAI ACCWGGT 1 cut(s) 432
SfcI CTRYAG 2 cut(s) 223, 888
SfuI TTCGAA 1 cut(s) 702
SinI GGWCC 3 cut(s) 337, 563, 959
SmiMI CAYNNNNRTG 3 cut(s) 261, 531, 1187
SmlI CTYRAG 2 cut(s) 275, 941
SmoI CTYRAG 2 cut(s) 275, 941
SphI GCATGC 1 cut(s) 181
Sse9I AATT 4 cut(s) 201, 387, 636, 936
SseBI AGGCCT 1 cut(s) 1166
SspMI CTAG 2 cut(s) 551, 1005
SstI GAGCTC 2 cut(s) 108, 796
StuI AGGCCT 1 cut(s) 1166
StyD4I CCNGG 3 cut(s) 300, 340, 432
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 6 cut(s) 118, 217, 224, 236, 361, 1180
TaiI ACGT 2 cut(s) 138, 519
TaqI TCGA 2 cut(s) 82, 702
TasI AATT 4 cut(s) 201, 387, 636, 936
TfiI GAWTC 3 cut(s) 699, 1021, 1068
Tru1I TTAA 1 cut(s) 1225
Tru9I TTAA 1 cut(s) 1225
TscAI CASTG 5 cut(s) 220, 421, 665, 691, 870
TseFI GTSAC 3 cut(s) 412, 1054, 1180
TseI GCWGC 2 cut(s) 22, 572
Tsp45I GTSAC 3 cut(s) 412, 1054, 1180
TspDTI ATGAA 2 cut(s) 503, 973
TspRI CASTG 5 cut(s) 220, 421, 665, 691, 870
VpaK11BI GGWCC 3 cut(s) 337, 563, 959
XagI CCTNNNNNAGG 2 cut(s) 53, 1005
XapI RAATTY 1 cut(s) 636
XceI RCATGY 1 cut(s) 181
XcmI CCANNNNNNNNNTGG 4 cut(s) 140, 168, 298, 748
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 2 cut(s) 551, 1005
ZraI GACGTC 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.