Prupe.4G020100_v2.0.a1

Starch synthase 3, chloroplastic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
935583 .. 945355
9773 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G020100.2

Sequence Viewer

Length: 3507 bp
ATGTCTCTGCAAGCACAGAGGCCACTCGGCTGGCGAACGGTCTTCCAAGAGAGAGGAACCAATTTGAAGCTCAAACCATTTACTGGGTTTTCTCCTCATGGAAGATATTCTTCATGGTTCAAAGGAGACCTGGCAAGTGGGGTTTCATACCAAATTACTGCCAGTTCAGCTGATTCTTCAAGGAGGAGACAGAGAAAAGTGACCACTCCTACTAACAGCCCTGGTCCCAAGGGATTAGTGCCAAAAATTCCAGTAGGAACTAGCGTCCAGAAGACGAATCAAAAGAGTAATGGGGATAAAAAGGGTTCTATATCTTCAAAATCCAGTGAACTTGCTGGGCCCAACAAGAAAACAATTGAATTGAGAGTTGATACCAAAGGAGAATGGGCAGTTGAACCTTCACAAGAGGATGATGTTGAGGAAAAAAGAATTGGTGAAACTAGTATTAAAGTTGAGGGATCATCTTCAATTAGCAAACCGTCAGATATTGCTAGAGGTATTCAAGGGATAGAAAATGGGAGTGTAGATAAGGTCCTTGAGGACTTGGCAGAGATACAGCCAAAAGGAACAGCTTCCGAGGGTGGTGATGAGAATGTGGCAGAAGCAATACTTTCTGACAAACAGAGTTTGGCTAGAAGAAAGATGGATGACTCTGTGGATGACAAAGGCACTGATACTGATAAAAAGTTAACCGATGAAGCTTCTTTAAAATCAAAGTTGGAAATGGAAGAAAAATTGCGTAAAGAGGAGATTGTGAGGCTTGCTGAGGAGAACTTCTTAAGAGGGAACAAAATCTTTGTCTATCCTCAGGTGGTGAAACCTGATCAAGATATAGATATTTTTCTTAATAGAAGTCTATCCACCCTAAGCAATGAGCCAGAGATTCTCATAATGGGAGCCTTTAATGACTGGCGGTGGAAATCTTTTACCTTCAGGTTGAACAAAACACAACTCAAAGGGGATTGGTGGTCTTGCCAGTTTCATGTTCCTAAAGAATCATATAAGATAGACTTTGTGTTCTTCAATGGTCAAAATATTTATGACAATAATGATGAGAAAGATTTCTGCATAGCCGTGGAAGGTGGAATGGACCTCTTTGCATTTGAAGATTTCTTGCTTGATGAGAAGCGCAAAGAACTGGAGAAACTTGCAAAGGAGCAAGCTGAGAGGGAAAGGCAAGCGGAAGAGCAGAGGCAAATTGAAGCAGAGAAGGCAGCAAGTGAAGCTGACAGAGCAGAGGCAAGAGCAGAGATCGAAAGGAGACGAAAAATGGTGCAAGAGTTGATCAAGAAGGGTGTAAGGTCTGTAGAGAATGTTTGGTACATAGAGCCTAGTGAGTTTAAAGGTGAGGACTTGGTGAAGTTATACTATAACCGAAGCTCAGGTCCTCTTGCTCATGCTAAGGAAATATGGATTCATGGGGGGCATAATAATTGGAAGGATGGATTATCTATTGTTGAGAGGCTAGTTAGCTCTGAGGAAAAGGATGGTGACTGGTGGTATGCCAATGTTGTTGTACCTGATCAAGCTGTTGTCTTGGATTGGGTTTTTGCCGATGGACCACCTCAAAATGCTGTTCTATATGATAACAACCACCGCCATGATTTCCATTCTATAGTTCCAAAGTCCATTCCTGAGGAACTATATTGGGTTGAGGAAGAACACAAGATATATAGGAAGCTCCAGGAGGAGAGGAGATTAAGGGAGGAGGCAATACGTGCCAAGGCCGAAAGAACAGCACGTATGAAAGCAGAAATGAAGGAAAGAACTTTGAAAAGGTTTTTGCTGTCTCAGAAGCATATAGTGTACACTGAGCCTCTTGATGTTCAAGCTGGAAGCATGGCAACGGTCTTCTACAATCCTGCCAGTACAGTTCTGAATGGAAAGCCTGAGGTTTGGTTCAGAGGCTCTTTTAACCGTTGGACCCATCGCAAGGGTCCATTGCCACCACAGAAGATGTTACCTGCAGAGACTGGTTCTCATGTCAAGACAACTGTTAAAGTTCCGCTCGATGCATACGTGATGGACTTTGTTTTCTCTGAGAAGAAAGATGATGATGGACTCTTTGACAACAAAAATGGTATGGATTACCACATTCCGGTGTTTGGAGGAGTTTTGAAGGAGTCACCAATGCACATTGTGCATATTTCTGTTGAAATGGCTCCCATTGCAAAGGTTGGAGGGCTTGGTGACGTGGTTACTAGTCTATCCCGAGCTGTGCAAGACTTAAATCACCATGTTGACATTATTCTTCCTAAGTACGACTGTTTGAACCTTAGCAATGTGAAGGGATTCCAGTACAACAGAAGCTATTCTTGGGGCGGAACTGAAATAAAAGTTTGGTTTGGTAAAGTGGAAGGTGTTCCAGTCTACTTTTTGGAGCCTCAAAATAGATTCTTTTATACAGGTTGCATATATGGTTGTAAGAATGATGCAGAGAGATTTGGTTTCTTTTGCCATGCTGCTCTAGAATTTTTACTCCAAAGTGGATTTCATCCTGATATCATTCACTGCCATGATTGGTCTAGCGCACCTGTTGCCTGGTTATATAAAGATCATTACATGCATTATGGTCTTAGTAAAGCTCGGGTTGTCTTCACAATTCATAACCTTGAGTTTGGAGCGCACTTTATTGGAAAAGCTGTGGGATACTCAGACAAGGCCACAACTGTATCCGACAGTTATGCTAAGGAGGTTGCTGGAAATCCTGCAATTGCTCCACATCTCTACAAGTTCCATGGTATAATAAATGGAATTGATCAAGATATCTGGGATCCATACAATGATAAATTCATTCCTATATCGTATACTTCTGAAAATGTTGTTGAAGGCAAACAAGCTGCCAAGGAAGCCTTGCAACAAAGGCTTGGTCTGAAAACAGCCGATCTCCCTGTAGTAGGTATTATTACTCGCTTAACTCACCAAAAAGGAATCCATCTCATCAAGCATGCCATTTGGCGTACCTTGGAACGCAATGGACAGGTTACTTTCATCTCTCTCCCACTTTTTGTTGTATTGCTTGGTTCAGCTCCAGATCCTCGGATCCAAAATGATTTTGTAAATTTGGCAAATCAATTACATTCTTCTTATGGTGACCGTGCACGCCTTTGTTTGACTTATGATGAGCCACTCTCACATTTGATATACGCTGGTGCTGATTTCATCTTAGTTCCTTCAATTTTTGAGCCATGCGGACTGACACAACTCATAGCAATGAGATACGGTTCTATACCTGTTGTTCGTAAAACTGGAGGACTTTACGATACTGTATTTGATGTTGACCATGACAAAGAGAGAGCAGATGCCCAGGGTGTTGAACCAAATGGATTCAGCTTTGATGGACCTGACGCCGCTGGTGTCGATTATGCTCTGAATAGGGCTATCTCTGCTTGGTATGATGGTCGGGATTGGTTCAACTCGTTGTGCAAGACAGTGATGGAGCAAGATTGGTCTTGGAACAAGCCAGCTCTCGACTACATGGAGCTTTATCACGCAGCACGGAAGTGA

Protein Analysis

1169

Amino Acids

132.52

Weight (kDa)

6.11

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1972
AccB7I CCANNNNNTGG 1 cut(s) 83
AccBSI CCGCTC 1 cut(s) 2008
AccI GTMKAC 2 cut(s) 2370, 2807
AciI CCGC 7 cut(s) 913, 1181, 1597, 2006, 2322, 3192, 3351
AclWI GGATC 6 cut(s) 466, 2768, 2781, 3029, 3037, 3050
AcsI RAATTY 4 cut(s) 246, 2471, 2789, 3061
AcuI CTGAAG 1 cut(s) 916
AcyI GRCGYC 1 cut(s) 3348
AdeI CACNNNGTG 1 cut(s) 2140
AfaI GTAC 7 cut(s) 1322, 1518, 1808, 1870, 2261, 2300, 2962
AfiI CCNNNNNNNGG 5 cut(s) 83, 1933, 2098, 2105, 2897
AflII CTTAAG 1 cut(s) 778
AhlI ACTAGT 2 cut(s) 440, 2201
AjiI CACGTC 1 cut(s) 2194
AjnI CCWGG 5 cut(s) 129, 220, 1683, 2540, 3306
AjuI GAANNNNNNNTTGG 6 cut(s) 414, 446, 2299, 2331, 2475, 2507
AleI CACNNNNGTG 1 cut(s) 3502
Alw21I GWGCWC 1 cut(s) 3103
Alw26I GTCTC 6 cut(s) 9, 120, 181, 1255, 1794, 1964
Alw44I GTGCAC 1 cut(s) 3099
AlwI GGATC 6 cut(s) 466, 2768, 2781, 3029, 3037, 3050
AlwNI CAGNNNCTG 1 cut(s) 1973
Ama87I CYCGRG 2 cut(s) 2211, 2586
AoxI GGCC 4 cut(s) 20, 338, 1725, 2661
ApaI GGGCCC 1 cut(s) 342
ApaLI GTGCAC 1 cut(s) 3099
ApeKI GCWGC 4 cut(s) 1214, 2462, 2840, 3494
ApoI RAATTY 4 cut(s) 246, 2471, 2789, 3061
ArsI GACNNNNNNTTYG 6 cut(s) 783, 815, 1369, 1401, 2854, 2886
Asp700I GAANNNNTTC 6 cut(s) 106, 571, 1061, 2291, 2311, 2361
AspLEI GCGC 3 cut(s) 1131, 2531, 2626
AvaI CYCGRG 2 cut(s) 2211, 2586
AvaII GGWCC 8 cut(s) 224, 532, 1090, 1385, 1559, 1923, 1937, 3341
AxyI CCTNAGG 3 cut(s) 807, 1635, 1890
BaeGI GKGCMC 2 cut(s) 342, 3103
BaeI ACNNNNGTAYC 2 cut(s) 2655, 2688
BamHI GGATCC 2 cut(s) 2773, 3042
BanII GRGCYC 1 cut(s) 342
BbsI GAAGAC 4 cut(s) 34, 278, 1843, 2587
Bbv12I GWGCWC 1 cut(s) 3103
BbvCI CCTCAGC 1 cut(s) 765
BbvI GCAGC 3 cut(s) 1226, 2449, 2827
BceAI ACGGC 1 cut(s) 1058
BcgI CGANNNNNNTGC 2 cut(s) 2666, 2700
BciT130I CCWGG 5 cut(s) 131, 222, 1685, 2542, 3308
BciVI GTATCC 2 cut(s) 2642, 2683
BclI TGATCA 4 cut(s) 823, 1284, 1522, 2758
BcoDI GTCTC 6 cut(s) 9, 120, 181, 1255, 1794, 1964
BcuI ACTAGT 2 cut(s) 440, 2201
BfaI CTAG 9 cut(s) 261, 441, 492, 633, 1332, 1466, 2202, 2468, 2526
BfmI CTRYAG 4 cut(s) 1305, 1614, 1965, 2892
BfrI CTTAAG 1 cut(s) 778
BfuAI ACCTGC 1 cut(s) 1972
BfuI GTATCC 2 cut(s) 2642, 2683
BisI GCNGC 5 cut(s) 1215, 2463, 2841, 3351, 3495
BlsI GCNGC 5 cut(s) 1216, 2464, 2842, 3352, 3496
Bme1390I CCNGG 5 cut(s) 131, 222, 1685, 2542, 3308
Bme18I GGWCC 8 cut(s) 224, 532, 1090, 1385, 1559, 1923, 1937, 3341
BmeT110I CYCGRG 2 cut(s) 2211, 2586
BmgBI CACGTC 1 cut(s) 2194
BmrFI CCNGG 5 cut(s) 131, 222, 1685, 2542, 3308
BmrI ACTGGG 1 cut(s) 93
BmsI GCATC 3 cut(s) 2002, 2422, 3292
BmuI ACTGGG 1 cut(s) 93
BpiI GAAGAC 4 cut(s) 34, 278, 1843, 2587
BplI GAGNNNNNCTC 2 cut(s) 3116, 3148
BpmI CTGGAG 4 cut(s) 1160, 1667, 3015, 3270
Bpu10I CCTNAGC 6 cut(s) 765, 866, 1381, 1401, 2276, 2688
BpuEI CTTGAG 2 cut(s) 557, 2633
BsaAI YACGTR 3 cut(s) 1718, 1742, 2020
BsaHI GRCGYC 1 cut(s) 3348
BsaI GGTCTC 1 cut(s) 120
BsaWI WCCGGW 1 cut(s) 2098
Bsc4I CCNNNNNNNGG 5 cut(s) 83, 1933, 2098, 2105, 2897
Bse21I CCTNAGG 3 cut(s) 807, 1635, 1890
Bse3DI GCAATG 6 cut(s) 877, 1940, 2166, 2287, 2980, 3219
BseBI CCWGG 5 cut(s) 131, 222, 1685, 2542, 3308
BseGI GGATG 6 cut(s) 415, 652, 664, 1447, 1492, 2494
BseLI CCNNNNNNNGG 5 cut(s) 83, 1933, 2098, 2105, 2897
BseMI GCAATG 6 cut(s) 877, 1940, 2166, 2287, 2980, 3219
BseRI GAGGAG 8 cut(s) 84, 199, 761, 782, 1703, 1708, 1721, 2124
BseSI GKGCMC 2 cut(s) 342, 3103
BseXI GCAGC 3 cut(s) 1226, 2449, 2827
BseYI CCCAGC 1 cut(s) 335
BshFI GGCC 4 cut(s) 22, 340, 1727, 2663
BsiHKAI GWGCWC 1 cut(s) 3103
BsiHKCI CYCGRG 2 cut(s) 2211, 2586
BsiSI CCGG 1 cut(s) 2099
BslFI GGGAC 1 cut(s) 210
BslI CCNNNNNNNGG 5 cut(s) 83, 1933, 2098, 2105, 2897
BsmAI GTCTC 6 cut(s) 9, 120, 181, 1255, 1794, 1964
BsmBI CGTCTC 1 cut(s) 1255
BsmFI GGGAC 1 cut(s) 210
BsnI GGCC 4 cut(s) 22, 340, 1727, 2663
Bso31I GGTCTC 1 cut(s) 120
BsoBI CYCGRG 2 cut(s) 2211, 2586
Bsp120I GGGCCC 1 cut(s) 338
Bsp1286I GDGCHC 2 cut(s) 342, 3103
Bsp1407I TGTACA 1 cut(s) 1806
Bsp19I CCATGG 1 cut(s) 2737
BspACI CCGC 7 cut(s) 913, 1181, 1597, 2006, 2322, 3192, 3351
BspANI GGCC 4 cut(s) 22, 340, 1727, 2663
BspMAI CTGCAG 1 cut(s) 1969
BspMI ACCTGC 1 cut(s) 1972
BspPI GGATC 6 cut(s) 466, 2768, 2781, 3029, 3037, 3050
BspQI GCTCTTC 1 cut(s) 1179
BspTI CTTAAG 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 120
BsrBI CCGCTC 1 cut(s) 2008
BsrDI GCAATG 6 cut(s) 877, 1940, 2166, 2287, 2980, 3219
BsrGI TGTACA 1 cut(s) 1806
BssNAI GTATAC 1 cut(s) 2808
BssNI GRCGYC 1 cut(s) 3348
BssT1I CCWWGG 5 cut(s) 228, 1722, 2737, 2844, 2964
Bst1107I GTATAC 1 cut(s) 2808
Bst2UI CCWGG 5 cut(s) 131, 222, 1685, 2542, 3308
Bst6I CTCTTC 1 cut(s) 1179
BstACI GRCGYC 1 cut(s) 3348
BstAFI CTTAAG 1 cut(s) 778
BstAPI GCANNNNNTGC 3 cut(s) 1718, 2140, 2537
BstAUI TGTACA 1 cut(s) 1806
BstBAI YACGTR 3 cut(s) 1718, 1742, 2020
BstC8I GCNNGC 8 cut(s) 12, 32, 762, 1161, 1179, 2949, 3103, 3465
BstDSI CCRYGG 2 cut(s) 1074, 2737
BstEII GGTNACC 1 cut(s) 3092
BstENI CCTNNNNNAGG 1 cut(s) 2895
BstF5I GGATG 6 cut(s) 415, 652, 664, 1447, 1492, 2494
BstHHI GCGC 3 cut(s) 1131, 2531, 2626
BstMAI GTCTC 6 cut(s) 9, 120, 181, 1255, 1794, 1964
BstNI CCWGG 5 cut(s) 131, 222, 1685, 2542, 3308
BstNSI RCATGY 2 cut(s) 2566, 2951
BstPI GGTNACC 1 cut(s) 3092
BstSCI CCNGG 5 cut(s) 129, 220, 1683, 2540, 3306
BstSFI CTRYAG 4 cut(s) 1305, 1614, 1965, 2892
BstSLI GKGCMC 2 cut(s) 342, 3103
BstV1I GCAGC 3 cut(s) 1226, 2449, 2827
BstV2I GAAGAC 4 cut(s) 34, 278, 1843, 2587
BstX2I RGATCY 3 cut(s) 2773, 3034, 3042
BstXI CCANNNNNNTGG 1 cut(s) 30
BstYI RGATCY 3 cut(s) 2773, 3034, 3042
BstZ17I GTATAC 1 cut(s) 2808
Bsu36I CCTNAGG 3 cut(s) 807, 1635, 1890
BsuI GTATCC 2 cut(s) 2642, 2683
BsuRI GGCC 4 cut(s) 22, 340, 1727, 2663
BtgI CCRYGG 2 cut(s) 1074, 2737
BtgZI GCGATG 1 cut(s) 1913
BtrI CACGTC 1 cut(s) 2194
BtsCI GGATG 6 cut(s) 415, 652, 664, 1447, 1492, 2494
BtsI GCAGTG 1 cut(s) 2509
BtsIMutI CAGTG 5 cut(s) 331, 669, 1809, 2509, 3438
BveI ACCTGC 1 cut(s) 1972
Cac8I GCNNGC 8 cut(s) 12, 32, 762, 1161, 1179, 2949, 3103, 3465
CaiI CAGNNNCTG 1 cut(s) 1973
CfoI GCGC 3 cut(s) 1131, 2531, 2626
CseI GACGC 2 cut(s) 253, 3356
Csp6I GTAC 7 cut(s) 1321, 1517, 1807, 1869, 2260, 2299, 2961
CviQI GTAC 7 cut(s) 1321, 1517, 1807, 1869, 2260, 2299, 2961
DraI TTTAAA 2 cut(s) 708, 1342
DraIII CACNNNGTG 1 cut(s) 2140
Eam1104I CTCTTC 1 cut(s) 1179
EarI CTCTTC 1 cut(s) 1179
EciI GGCGGA 1 cut(s) 2337
Eco130I CCWWGG 5 cut(s) 228, 1722, 2737, 2844, 2964
Eco24I GRGCYC 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 120
Eco32I GATATC 2 cut(s) 2503, 2767
Eco47I GGWCC 8 cut(s) 224, 532, 1090, 1385, 1559, 1923, 1937, 3341
Eco57I CTGAAG 1 cut(s) 916
Eco81I CCTNAGG 3 cut(s) 807, 1635, 1890
Eco88I CYCGRG 2 cut(s) 2211, 2586
Eco91I GGTNACC 1 cut(s) 3092
EcoNI CCTNNNNNAGG 1 cut(s) 2895
EcoO109I RGGNCCY 2 cut(s) 532, 1385
EcoO65I GGTNACC 1 cut(s) 3092
EcoRII CCWGG 5 cut(s) 129, 220, 1683, 2540, 3306
EcoRV GATATC 2 cut(s) 2503, 2767
EcoT14I CCWWGG 5 cut(s) 228, 1722, 2737, 2844, 2964
EcoT22I ATGCAT 2 cut(s) 2017, 2568
EcoT38I GRGCYC 1 cut(s) 342
ErhI CCWWGG 5 cut(s) 228, 1722, 2737, 2844, 2964
Esp3I CGTCTC 1 cut(s) 1255
FaqI GGGAC 1 cut(s) 210
FbaI TGATCA 4 cut(s) 823, 1284, 1522, 2758
FblI GTMKAC 2 cut(s) 2370, 2807
Fnu4HI GCNGC 5 cut(s) 1215, 2463, 2841, 3351, 3495
FokI GGATG 6 cut(s) 422, 659, 671, 1454, 1499, 2481
FriOI GRGCYC 1 cut(s) 342
Fsp4HI GCNGC 5 cut(s) 1215, 2463, 2841, 3351, 3495
FspBI CTAG 9 cut(s) 261, 441, 492, 633, 1332, 1466, 2202, 2468, 2526
GlaI GCGC 3 cut(s) 1130, 2530, 2625
GluI GCNGC 5 cut(s) 1215, 2463, 2841, 3351, 3495
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 4 cut(s) 1160, 1667, 3015, 3270
HaeIII GGCC 4 cut(s) 22, 340, 1727, 2663
HapII CCGG 1 cut(s) 2099
HgaI GACGC 2 cut(s) 253, 3356
HhaI GCGC 3 cut(s) 1131, 2531, 2626
Hin1I GRCGYC 1 cut(s) 3348
Hin6I GCGC 3 cut(s) 1129, 2529, 2624
HinP1I GCGC 3 cut(s) 1129, 2529, 2624
HincII GTYRAC 3 cut(s) 690, 2242, 3280
HindII GTYRAC 3 cut(s) 690, 2242, 3280
HindIII AAGCTT 1 cut(s) 699
HpaI GTTAAC 1 cut(s) 690
HpaII CCGG 1 cut(s) 2099
Hpy166II GTNNAC 9 cut(s) 329, 690, 1807, 1809, 2242, 2371, 2808, 3101, 3280
Hpy8I GTNNAC 9 cut(s) 329, 690, 1807, 1809, 2242, 2371, 2808, 3101, 3280
HpyCH4IV ACGT 4 cut(s) 1717, 1741, 2019, 2193
HpySE526I ACGT 4 cut(s) 1717, 1741, 2019, 2193
Hsp92I GRCGYC 1 cut(s) 3348
HspAI GCGC 3 cut(s) 1129, 2529, 2624
Ksp22I TGATCA 4 cut(s) 823, 1284, 1522, 2758
KspAI GTTAAC 1 cut(s) 690
LguI GCTCTTC 1 cut(s) 1179
Lsp1109I GCAGC 3 cut(s) 1226, 2449, 2827
LweI GCATC 3 cut(s) 2002, 2422, 3292
MaeI CTAG 9 cut(s) 261, 441, 492, 633, 1332, 1466, 2202, 2468, 2526
MaeII ACGT 4 cut(s) 1717, 1741, 2019, 2193
MaeIII GTNAC 8 cut(s) 199, 1490, 1959, 2124, 2189, 2197, 2983, 3092
MbiI CCGCTC 1 cut(s) 2008
MfeI CAATTG 2 cut(s) 354, 2712
MflI RGATCY 3 cut(s) 2773, 3034, 3042
MhlI GDGCHC 2 cut(s) 342, 3103
MlyI GAGTC 3 cut(s) 644, 2055, 2132
MmeI TCCRAC 4 cut(s) 699, 1901, 2158, 2700
Mph1103I ATGCAT 2 cut(s) 2017, 2568
MroXI GAANNNNTTC 6 cut(s) 106, 571, 1061, 2291, 2311, 2361
MslI CAYNNNNRTG 6 cut(s) 1073, 1599, 2099, 2514, 3212, 3502
MspA1I CMGCKG 2 cut(s) 170, 3353
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 1 cut(s) 2099
MspR9I CCNGG 5 cut(s) 131, 222, 1685, 2542, 3308
MunI CAATTG 2 cut(s) 354, 2712
MvaI CCWGG 5 cut(s) 131, 222, 1685, 2542, 3308
NcoI CCATGG 1 cut(s) 2737
NmeAIII GCCGAG 1 cut(s) 6
NmuCI GTSAC 5 cut(s) 199, 1490, 2124, 2189, 3092
NsiI ATGCAT 2 cut(s) 2017, 2568
NspI RCATGY 2 cut(s) 2566, 2951
OliI CACNNNNGTG 1 cut(s) 3502
PaeI GCATGC 1 cut(s) 2951
PasI CCCWGGG 1 cut(s) 3307
PciSI GCTCTTC 1 cut(s) 1179
PcsI WCGNNNNNNNCGW 1 cut(s) 2016
PdmI GAANNNNTTC 6 cut(s) 106, 571, 1061, 2291, 2311, 2361
PfeI GAWTC 9 cut(s) 173, 277, 883, 995, 1414, 2292, 2394, 2931, 3327
PflMI CCANNNNNTGG 1 cut(s) 83
PfoI TCCNGGA 1 cut(s) 1683
PkrI GCNGC 5 cut(s) 1216, 2464, 2842, 3352, 3496
PleI GAGTC 3 cut(s) 644, 2055, 2131
PpsI GAGTC 3 cut(s) 644, 2055, 2131
Ppu21I YACGTR 3 cut(s) 1718, 1742, 2020
PpuMI RGGWCCY 2 cut(s) 532, 1385
Psp5II RGGWCCY 2 cut(s) 532, 1385
Psp6I CCWGG 5 cut(s) 129, 220, 1683, 2540, 3306
PspEI GGTNACC 1 cut(s) 3092
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 5 cut(s) 129, 220, 1683, 2540, 3306
PspOMI GGGCCC 1 cut(s) 338
PspPPI RGGWCCY 2 cut(s) 532, 1385
PstI CTGCAG 1 cut(s) 1969
PstNI CAGNNNCTG 1 cut(s) 1973
PsuI RGATCY 3 cut(s) 2773, 3034, 3042
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 7 cut(s) 1322, 1518, 1808, 1870, 2261, 2300, 2962
RsaNI GTAC 7 cut(s) 1321, 1517, 1807, 1869, 2260, 2299, 2961
RseI CAYNNNNRTG 6 cut(s) 1073, 1599, 2099, 2514, 3212, 3502
SapI GCTCTTC 1 cut(s) 1179
SatI GCNGC 5 cut(s) 1215, 2463, 2841, 3351, 3495
SchI GAGTC 3 cut(s) 644, 2055, 2132
ScrFI CCNGG 5 cut(s) 131, 222, 1685, 2542, 3308
SduI GDGCHC 2 cut(s) 342, 3103
SfaNI GCATC 3 cut(s) 2002, 2422, 3292
SfcI CTRYAG 4 cut(s) 1305, 1614, 1965, 2892
SinI GGWCC 8 cut(s) 224, 532, 1090, 1385, 1559, 1923, 1937, 3341
SmiMI CAYNNNNRTG 6 cut(s) 1073, 1599, 2099, 2514, 3212, 3502
SmlI CTYRAG 3 cut(s) 536, 778, 2612
SmoI CTYRAG 3 cut(s) 536, 778, 2612
SpeI ACTAGT 2 cut(s) 440, 2201
SphI GCATGC 1 cut(s) 2951
SsiI CCGC 7 cut(s) 913, 1181, 1597, 2006, 2322, 3192, 3351
SspI AATATT 1 cut(s) 1036
SspMI CTAG 9 cut(s) 261, 441, 492, 633, 1332, 1466, 2202, 2468, 2526
StyD4I CCNGG 5 cut(s) 129, 220, 1683, 2540, 3306
StyI CCWWGG 5 cut(s) 228, 1722, 2737, 2844, 2964
TaiI ACGT 4 cut(s) 1720, 1744, 2022, 2196
TaqI TCGA 4 cut(s) 1254, 2010, 3360, 3471
TatI WGTACW 3 cut(s) 1806, 1868, 2298
TauI GCSGC 1 cut(s) 3353
TfiI GAWTC 9 cut(s) 173, 277, 883, 995, 1414, 2292, 2394, 2931, 3327
TscAI CASTG 5 cut(s) 331, 676, 1816, 2516, 3438
TseFI GTSAC 5 cut(s) 199, 1490, 2124, 2189, 3092
TseI GCWGC 4 cut(s) 1214, 2462, 2840, 3494
Tsp45I GTSAC 5 cut(s) 199, 1490, 2124, 2189, 3092
TspRI CASTG 5 cut(s) 331, 676, 1816, 2516, 3438
Van91I CCANNNNNTGG 1 cut(s) 83
Vha464I CTTAAG 1 cut(s) 778
VneI GTGCAC 1 cut(s) 3099
VpaK11BI GGWCC 8 cut(s) 224, 532, 1090, 1385, 1559, 1923, 1937, 3341
XagI CCTNNNNNAGG 1 cut(s) 2895
XapI RAATTY 4 cut(s) 246, 2471, 2789, 3061
XbaI TCTAGA 1 cut(s) 2467
XceI RCATGY 2 cut(s) 2566, 2951
XmiI GTMKAC 2 cut(s) 2370, 2807
XmnI GAANNNNTTC 6 cut(s) 106, 571, 1061, 2291, 2311, 2361
XspI CTAG 9 cut(s) 261, 441, 492, 633, 1332, 1466, 2202, 2468, 2526
Zsp2I ATGCAT 2 cut(s) 2017, 2568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.