Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013603.1

Orthogroup ID

OG0003232

Physical Location & Seq

Genomic Coordinates Forward (+)

14213 .. 21366

Gene Structure 7154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013603.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3267 bp

atggacgtgtctttgcaagctcataggccactcagttgcagaacagtgtttcaagacagcagaagcattttgaagctcaaaccacttactgggttttgtcctaatggaagatattcttcatggttcaaaggagacctgacaagtggggcttcatgtaaaattactgctagttcagctgatttctctaggaggagacagaaaaaagtgtcaggttcaaggcctaatggccctggtccaaaggcaatagttcccaaaaccccagtacaaactagcgtcccaaagacaaatcaaaggaatactggggataaaaagggttttgcatcttctacagccagtgttgttgggccgaaagttgatgaaaaaaggcttgatgaaactagtcgtaaagttgaggagtcttcgtcaccagctactggtagaagctttcaagaggtagaaaatgggagtatagataaatgcattgatattgataagaagttatctgatgaagcttctttgaaactaaagttggagatggaagaaaaacaacgtatagaggagattgagaggttagctgaggaaaacttctccagagggaagaaactgtttgtctatcctcaagtggtgaaacctgatcaacatatagaagtgtttcttaataaaagtctttccaccctaaacagtgaagatgatgttttcatcatgggagcctttaatgaatggcgctggaaatcttttacctttcggttgagtagaacaaatctcaaaggggattggtggtcttgtcaatttcatgttcctgctgaagcatataagatagactttgtgttcttcaatggaaaagatgtttatgacaataatgataagaaggatttctgcatagatgtagaaagtggaatggacgcctttgcatttgaagatttcttacttgaggagaagcgtaaagaacttgagaaacttgcagaggagcaagctgagagggaaaggcaagcagaagagcagaggcgcattgaagccgagaaaatagcacaagaagctgacagagcagaggcaaaggcagagactgaaaggagacgaaaattggtgcaggagttgaccaaaaaggctgtaaggtctgttccggatgtttggtacatagagcctagtgagtttaaaagtaaagacttggtgaggttatattataaccgaagctcaggtcctcttgctggtgctaatgaactatgggttcatgggggacataatggttggagtgctggcttatcaattgttgaaagtcttgttagatgtgaggaaaaggatggtgactggtggtatgccaatgttgttgtacctgaccaagctgttgtattggattgggtttttgctgatggaccgcctcagaatgccactgtatatgataacaatcatcgtcatgatttccatgcagtagttccaaagtccattcctcaggaacaatattgggttgaggaagaacaccagatctataggaagctccaggaggagcggagattaagggaggaggccatacgtgccaaggtaaaaaaaacagcacttatgaaagcaaaaatgaaggaacgaactctgagaaggtatctgctgtctcagaagcatatagtctacactgagcctcttgatgtccaagccggaagcatggtaacgattttctataatcctgccaatactgctttgcacggaaagcctgaggtctggttcagatgctcctttaaccattgggcccaccgcagtggtcccttgccaccacagaaaatggtacctgcagagaatggtactcatgtcaaaaccactgtcatggttccgctcgatgcatatgtgatggactttgtcttctctgagagtgaagaaggtggagtttttgacaacaaaaatgacatggattatcacattccagtgtttggaggagttttgaaggagtcaccaatgcacattgtgcatattacggttgaaatggcacccattgcaaaggttggaggccttggtgatgtggttaccagtctatcccgagctgtgcaagacttaaatcaccatgttgacgtcattcttcccaagtatgactgtttgaaccttagcaatgttaaggaatttcagtataaaagaagctattcttggggtggtactgaaatcaaagtttggtttgggaaagtggaaggagtttcagtctactttttggaacctcaaaatggactgttttatgcgggttgtatatatggttgtaagaatgatgcagagagatttggcttcttttgccatgctgctctagaatatctactccaaagtggatcccatcctgatatcattcattgccatgattggtctagtgcgcctgttacctggttatataaagatcattacatgcattatggtcttagtaaagctcgcattgtcttcacaattcataatcttgaatttggagcacactttattggaaaagctgtggcatactcagacaagtccactactgtatcccacacttactctaaggagattgctggaaatcctgcagtagctccacacctctacaagttccatggcataataaacggaattgaccaagatatatgggacccttacaatgatggattcctacctatattatatacttctgaaaatgttgttgaaggcaaacaagctgccaaggaagccttgcaacaaagacttggtctgaaaacagcagatctccctgtagtaggtattattactcgattaactcagcagaaaggaatccatcttatcaagcatgccatttggcgtaccttggaacgcaatggacaggttgtattgcttggttcagctccagatcctcgtatccaaaatgagtttgtaaatttggccaatcaattacattcttctcatgctgatcgtgctcgtctttgtttgacttatgatgagccactctcacatttgatatacgctggtgctgatttcatcctagttccttcaatatttgagccatgcggactgacccaacttgtagcaatgagatacggttccatacctgttgttcgaaaaactggagggctctacgacactgtatttgatgttgaccatgataaagagagagcagaggcgcagggtcttgaaccaaatgggttcagttttgacggagctgatgctgctggtgttgattatgctctaaatagagctatctctgcctggtatgatggtcgggagtggttcaactcgttgtgcaaaacagtgatggagcaagattggtcttggaaccgaccagctctcgattatatggagctgtatcacgcagcacggaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0010021 GO:0042802 GO:0043170 GO:0071704 GO:1901135 GO:1901137 GO:1901576 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

CBM53 Glyco_transf_5 Glycos_transf_1

Protein Analysis

1088

Amino Acids

123.7

Weight (kDa)

6.36

Isoelectric Point (pI)

44.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11720 AT1G11720
fragaria_vesca	FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040 FvH4_3g02040
malus_domestica	MD05G1347400.v1.1 MD10G1321600.v1.1
prunus_persica	Prupe.4G020100_v2.0.a1 Prupe.4G020100_v2.0.a1 Prupe.4G020100_v2.0.a1 Prupe.4G020100_v2.0.a1 Prupe.4G020100_v2.0.a1
pyrus_communis	pycom05g31510 pycom10g27230
rosa_chinensis	RchiOBHm_Chr5g0002941
rosa_laevigata	RLG00000031072
rosa_multiflora	Rmu_sc0013603.1_g000004
rosa_roxburghii	Rroxscaffold_1G00072920
rosa_rugosa	Rorug04G0400700 Rorug04G0400800 Rorug04G0400800
rosa_samantha	Rh5AG023700 Rh5BG026500 Rh5CG026400 Rh5DG025000
rosa_wichuraiana	Rw5G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1161
AatII	GACGTC	1 cut(s)	2034
Acc36I	ACCTGC	1 cut(s)	1762
Acc65I	GGTACC	1 cut(s)	1750
AccB1I	GGYRCC	2 cut(s)	1750, 1948
AccB7I	CCANNNNNTGG	3 cut(s)	89, 413, 1892
AccBSI	CCGCTC	2 cut(s)	1483, 1798
AccI	GTMKAC	2 cut(s)	1596, 2157
AccIII	TCCGGA	1 cut(s)	1099
AciI	CCGC	6 cut(s)	1352, 1483, 1720, 1796, 2192, 2952
AclWI	GGATC	3 cut(s)	2271, 2284, 2789
AcoI	YGGCCR	1 cut(s)	2826
AcsI	RAATTY	3 cut(s)	2078, 2402, 2821
AcuI	CTGAAG	1 cut(s)	804
AcyI	GRCGYC	2 cut(s)	882, 2031
AdeI	CACNNNGTG	1 cut(s)	1927
AfaI	GTAC	7 cut(s)	264, 1112, 1308, 1752, 1768, 2113, 2749
AfiI	CCNNNNNNNGG	6 cut(s)	89, 413, 1184, 1892, 2177, 2684
AflIII	ACRYGT	1 cut(s)	6
AhlI	ACTAGT	1 cut(s)	377
AjiI	CACGTC	1 cut(s)	7
AjnI	CCWGG	4 cut(s)	229, 1473, 2327, 3149
AjuI	GAANNNNNNNTTGG	4 cut(s)	491, 523, 2086, 2118
AleI	CACNNNNGTG	2 cut(s)	1722, 3262
Alw21I	GWGCWC	2 cut(s)	2413, 2863
Alw26I	GTCTC	5 cut(s)	126, 187, 1034, 1045, 1584
AlwI	GGATC	3 cut(s)	2271, 2284, 2789
AlwNI	CAGNNNCTG	2 cut(s)	413, 1043
Ama87I	CYCGRG	1 cut(s)	1998
Aor13HI	TCCGGA	1 cut(s)	1099
AoxI	GGCC	8 cut(s)	26, 218, 226, 344, 1500, 1713, 1969, 2826
ApaI	GGGCCC	1 cut(s)	1717
ApeKI	GCWGC	4 cut(s)	2249, 2627, 3110, 3254
ApoI	RAATTY	3 cut(s)	2078, 2402, 2821
ArsI	GACNNNNNNTTYG	8 cut(s)	1159, 1191, 1770, 1802, 2641, 2673, 3014, 3046
Asp700I	GAANNNNTTC	4 cut(s)	112, 630, 851, 2098
Asp718I	GGTACC	1 cut(s)	1750
AspLEI	GCGC	4 cut(s)	705, 987, 2320, 3067
AspS9I	GGNCC	9 cut(s)	227, 233, 344, 1175, 1349, 1713, 1714, 1727, 2560
AsuHPI	GGTGA	7 cut(s)	396, 616, 1159, 1292, 1905, 1988, 2012
AsuII	TTCGAA	1 cut(s)	3001
AvaI	CYCGRG	1 cut(s)	1998
AvaII	GGWCC	5 cut(s)	233, 1175, 1349, 1727, 2560
AxyI	CCTNAGG	2 cut(s)	1425, 1680
BaeGI	GKGCMC	1 cut(s)	1717
BaeI	ACNNNNGTAYC	4 cut(s)	1758, 1791, 2442, 2475
BalI	TGGCCA	1 cut(s)	2828
BamHI	GGATCC	1 cut(s)	2276
BanI	GGYRCC	2 cut(s)	1750, 1948
BanII	GRGCYC	2 cut(s)	1717, 3018
BarI	GAAGNNNNNNTAC	2 cut(s)	888, 920
BbsI	GAAGAC	3 cut(s)	390, 1816, 2374
Bbv12I	GWGCWC	2 cut(s)	2413, 2863
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	3 cut(s)	2236, 2614, 3097
BccI	CCATC	9 cut(s)	508, 1271, 1340, 1807, 2289, 2567, 2730, 3152, 3190
BciT130I	CCWGG	4 cut(s)	231, 1475, 2329, 3151
BciVI	GTATCC	2 cut(s)	2470, 2813
BclI	TGATCA	1 cut(s)	613
BcoDI	GTCTC	5 cut(s)	126, 187, 1034, 1045, 1584
BcuI	ACTAGT	1 cut(s)	377
BfaI	CTAG	8 cut(s)	168, 186, 270, 378, 1122, 2255, 2313, 2927
BfmI	CTRYAG	5 cut(s)	327, 1462, 1755, 2496, 2679
BfoI	RGCGCY	1 cut(s)	706
BfuAI	ACCTGC	1 cut(s)	1762
BfuI	GTATCC	2 cut(s)	2470, 2813
BglII	AGATCT	2 cut(s)	1458, 2671
BisI	GCNGC	4 cut(s)	2250, 2628, 3111, 3255
BlsI	GCNGC	4 cut(s)	2251, 2629, 3112, 3256
Bme1390I	CCNGG	4 cut(s)	231, 1475, 2329, 3151
Bme18I	GGWCC	5 cut(s)	233, 1175, 1349, 1727, 2560
BmeT110I	CYCGRG	1 cut(s)	1998
BmgBI	CACGTC	1 cut(s)	7
BmgT120I	GGNCC	9 cut(s)	227, 233, 344, 1175, 1349, 1713, 1714, 1727, 2560
BmrFI	CCNGG	4 cut(s)	231, 1475, 2329, 3151
BmrI	ACTGGG	3 cut(s)	99, 254, 309
BmsI	GCATC	5 cut(s)	329, 1685, 1792, 2209, 3097
BmuI	ACTGGG	3 cut(s)	99, 254, 309
BpiI	GAAGAC	3 cut(s)	390, 1816, 2374
BplI	GAGNNNNNCTC	2 cut(s)	2876, 2908
BpmI	CTGGAG	4 cut(s)	553, 1457, 2775, 3030
Bpu10I	CCTNAGC	3 cut(s)	555, 1171, 2063
Bpu14I	TTCGAA	1 cut(s)	3001
BpuEI	CTTGAG	3 cut(s)	582, 929, 950
BsaAI	YACGTR	1 cut(s)	1508
BsaBI	GATNNNNATC	1 cut(s)	1380
BsaHI	GRCGYC	2 cut(s)	882, 2031
BsaI	GGTCTC	1 cut(s)	126
BsaJI	CCNNGG	6 cut(s)	229, 1512, 1972, 2524, 2631, 2751
BsaWI	WCCGGW	1 cut(s)	1099
BsaXI	ACNNNNNCTCC	4 cut(s)	386, 416, 2139, 2169
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 413, 1184, 1892, 2177, 2684
Bse1I	ACTGG	9 cut(s)	94, 260, 304, 333, 418, 1289, 1886, 1989, 3013
Bse21I	CCTNAGG	2 cut(s)	1425, 1680
Bse3DI	GCAATG	5 cut(s)	1953, 2074, 2296, 2767, 2979
Bse8I	GATNNNNATC	1 cut(s)	1380
BseAI	TCCGGA	1 cut(s)	1099
BseBI	CCWGG	4 cut(s)	231, 1475, 2329, 3151
BseDI	CCNNGG	6 cut(s)	229, 1512, 1972, 2524, 2631, 2751
BseGI	GGATG	4 cut(s)	1108, 1282, 2281, 2922
BseJI	GATNNNNATC	1 cut(s)	1380
BseLI	CCNNNNNNNGG	6 cut(s)	89, 413, 1184, 1892, 2177, 2684
BseMI	GCAATG	5 cut(s)	1953, 2074, 2296, 2767, 2979
BseNI	ACTGG	9 cut(s)	94, 260, 304, 333, 418, 1289, 1886, 1989, 3013
BseRI	GAGGAG	8 cut(s)	205, 407, 551, 926, 959, 1493, 1511, 1911
BseSI	GKGCMC	1 cut(s)	1717
BseXI	GCAGC	3 cut(s)	2236, 2614, 3097
BsgI	GTGCAG	1 cut(s)	1085
BshFI	GGCC	8 cut(s)	28, 220, 228, 346, 1502, 1715, 1971, 2828
BshNI	GGYRCC	2 cut(s)	1750, 1948
BsiHKAI	GWGCWC	2 cut(s)	2413, 2863
BsiHKCI	CYCGRG	1 cut(s)	1998
BsiSI	CCGG	2 cut(s)	1100, 1623
BslFI	GGGAC	4 cut(s)	260, 1227, 1713, 2573
BslI	CCNNNNNNNGG	6 cut(s)	89, 413, 1184, 1892, 2177, 2684
BsmAI	GTCTC	5 cut(s)	126, 187, 1034, 1045, 1584
BsmBI	CGTCTC	1 cut(s)	1045
BsmFI	GGGAC	4 cut(s)	260, 1227, 1713, 2573
BsmI	GAATGC	1 cut(s)	1366
BsnI	GGCC	8 cut(s)	28, 220, 228, 346, 1502, 1715, 1971, 2828
Bso31I	GGTCTC	1 cut(s)	126
BsoBI	CYCGRG	1 cut(s)	1998
Bsp119I	TTCGAA	1 cut(s)	3001
Bsp120I	GGGCCC	1 cut(s)	1713
Bsp1286I	GDGCHC	4 cut(s)	1717, 2413, 2863, 3018
Bsp13I	TCCGGA	1 cut(s)	1099
Bsp143I	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
Bsp19I	CCATGG	1 cut(s)	2524
BspACI	CCGC	6 cut(s)	1352, 1483, 1720, 1796, 2192, 2952
BspANI	GGCC	8 cut(s)	28, 220, 228, 346, 1502, 1715, 1971, 2828
BspEI	TCCGGA	1 cut(s)	1099
BspHI	TCATGA	1 cut(s)	1390
BspMAI	CTGCAG	2 cut(s)	1759, 2500
BspMI	ACCTGC	1 cut(s)	1762
BspPI	GGATC	3 cut(s)	2271, 2284, 2789
BspQI	GCTCTTC	1 cut(s)	969
BspT104I	TTCGAA	1 cut(s)	3001
BspT107I	GGYRCC	2 cut(s)	1750, 1948
BspTNI	GGTCTC	1 cut(s)	126
BsrBI	CCGCTC	2 cut(s)	1483, 1798
BsrDI	GCAATG	5 cut(s)	1953, 2074, 2296, 2767, 2979
BsrI	ACTGG	9 cut(s)	94, 260, 304, 333, 418, 1289, 1886, 1989, 3013
BssECI	CCNNGG	6 cut(s)	229, 1512, 1972, 2524, 2631, 2751
BssMI	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
BssNI	GRCGYC	2 cut(s)	882, 2031
BssT1I	CCWWGG	5 cut(s)	1512, 1972, 2524, 2631, 2751
Bst2UI	CCWGG	4 cut(s)	231, 1475, 2329, 3151
Bst6I	CTCTTC	1 cut(s)	969
BstACI	GRCGYC	2 cut(s)	882, 2031
BstAPI	GCANNNNNTGC	2 cut(s)	1927, 1955
BstBAI	YACGTR	1 cut(s)	1508
BstBI	TTCGAA	1 cut(s)	3001
BstC8I	GCNNGC	6 cut(s)	18, 951, 969, 1234, 2374, 2736
BstDSI	CCRYGG	1 cut(s)	2524
BstEII	GGTNACC	1 cut(s)	1984
BstENI	CCTNNNNNAGG	1 cut(s)	2682
BstF5I	GGATG	4 cut(s)	1108, 1282, 2281, 2922
BstH2I	RGCGCY	1 cut(s)	706
BstHHI	GCGC	4 cut(s)	705, 987, 2320, 3067
BstKTI	GATC	7 cut(s)	616, 1461, 2279, 2344, 2674, 2797, 2857
BstMAI	GTCTC	5 cut(s)	126, 187, 1034, 1045, 1584
BstMBI	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
BstNI	CCWGG	4 cut(s)	231, 1475, 2329, 3151
BstNSI	RCATGY	2 cut(s)	2353, 2738
BstPI	GGTNACC	1 cut(s)	1984
BstSCI	CCNGG	4 cut(s)	229, 1473, 2327, 3149
BstSFI	CTRYAG	5 cut(s)	327, 1462, 1755, 2496, 2679
BstSLI	GKGCMC	1 cut(s)	1717
BstV1I	GCAGC	3 cut(s)	2236, 2614, 3097
BstV2I	GAAGAC	3 cut(s)	390, 1816, 2374
BstX2I	RGATCY	4 cut(s)	1458, 2276, 2671, 2794
BstXI	CCANNNNNNTGG	2 cut(s)	1724, 1789
BstYI	RGATCY	4 cut(s)	1458, 2276, 2671, 2794
Bsu36I	CCTNAGG	2 cut(s)	1425, 1680
BsuI	GTATCC	2 cut(s)	2470, 2813
BsuRI	GGCC	8 cut(s)	28, 220, 228, 346, 1502, 1715, 1971, 2828
BtgI	CCRYGG	1 cut(s)	2524
BtrI	CACGTC	1 cut(s)	7
BtsCI	GGATG	4 cut(s)	1108, 1282, 2281, 2922
BtsI	GCAGTG	1 cut(s)	1729
BveI	ACCTGC	1 cut(s)	1762
Cac8I	GCNNGC	6 cut(s)	18, 951, 969, 1234, 2374, 2736
CaiI	CAGNNNCTG	2 cut(s)	413, 1043
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	4 cut(s)	705, 987, 2320, 3067
Cfr13I	GGNCC	9 cut(s)	227, 233, 344, 1175, 1349, 1713, 1714, 1727, 2560
CseI	GACGC	2 cut(s)	262, 890
CsiI	ACCWGGT	1 cut(s)	2327
Csp6I	GTAC	7 cut(s)	263, 1111, 1307, 1751, 1767, 2112, 2748
CviQI	GTAC	7 cut(s)	263, 1111, 1307, 1751, 1767, 2112, 2748
DpnI	GATC	7 cut(s)	615, 1460, 2278, 2343, 2673, 2796, 2856
DpnII	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
DraI	TTTAAA	1 cut(s)	1132
DraIII	CACNNNGTG	1 cut(s)	1927
EaeI	YGGCCR	1 cut(s)	2826
Eam1104I	CTCTTC	1 cut(s)	969
EarI	CTCTTC	1 cut(s)	969
Eco130I	CCWWGG	5 cut(s)	1512, 1972, 2524, 2631, 2751
Eco147I	AGGCCT	2 cut(s)	220, 1971
Eco24I	GRGCYC	2 cut(s)	1717, 3018
Eco31I	GGTCTC	1 cut(s)	126
Eco32I	GATATC	1 cut(s)	2290
Eco47I	GGWCC	5 cut(s)	233, 1175, 1349, 1727, 2560
Eco57I	CTGAAG	1 cut(s)	804
Eco81I	CCTNAGG	2 cut(s)	1425, 1680
Eco88I	CYCGRG	1 cut(s)	1998
Eco91I	GGTNACC	1 cut(s)	1984
EcoNI	CCTNNNNNAGG	1 cut(s)	2682
EcoO109I	RGGNCCY	2 cut(s)	1175, 2560
EcoO65I	GGTNACC	1 cut(s)	1984
EcoRII	CCWGG	4 cut(s)	229, 1473, 2327, 3149
EcoRV	GATATC	1 cut(s)	2290
EcoT14I	CCWWGG	5 cut(s)	1512, 1972, 2524, 2631, 2751
EcoT22I	ATGCAT	3 cut(s)	461, 1807, 2355
EcoT38I	GRGCYC	2 cut(s)	1717, 3018
ErhI	CCWWGG	5 cut(s)	1512, 1972, 2524, 2631, 2751
Esp3I	CGTCTC	1 cut(s)	1045
FaqI	GGGAC	4 cut(s)	260, 1227, 1713, 2573
FauI	CCCGC	1 cut(s)	2185
FauNDI	CATATG	1 cut(s)	1807
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	2 cut(s)	1596, 2157
Fnu4HI	GCNGC	4 cut(s)	2250, 2628, 3111, 3255
FokI	GGATG	4 cut(s)	1115, 1289, 2268, 2909
FriOI	GRGCYC	2 cut(s)	1717, 3018
Fsp4HI	GCNGC	4 cut(s)	2250, 2628, 3111, 3255
FspBI	CTAG	8 cut(s)	168, 186, 270, 378, 1122, 2255, 2313, 2927
GlaI	GCGC	4 cut(s)	704, 986, 2319, 3066
GluI	GCNGC	4 cut(s)	2250, 2628, 3111, 3255
GsuI	CTGGAG	4 cut(s)	553, 1457, 2775, 3030
HaeII	RGCGCY	1 cut(s)	706
HaeIII	GGCC	8 cut(s)	28, 220, 228, 346, 1502, 1715, 1971, 2828
HapII	CCGG	2 cut(s)	1100, 1623
HgaI	GACGC	2 cut(s)	262, 890
HhaI	GCGC	4 cut(s)	705, 987, 2320, 3067
Hin1I	GRCGYC	2 cut(s)	882, 2031
Hin6I	GCGC	4 cut(s)	703, 985, 2318, 3065
HinP1I	GCGC	4 cut(s)	703, 985, 2318, 3065
HincII	GTYRAC	3 cut(s)	1074, 2029, 3040
HindII	GTYRAC	3 cut(s)	1074, 2029, 3040
HindIII	AAGCTT	2 cut(s)	421, 489
HinfI	GANTC	4 cut(s)	395, 1910, 2577, 2718
HpaII	CCGG	2 cut(s)	1100, 1623
HphI	GGTGA	7 cut(s)	396, 616, 1159, 1292, 1905, 1988, 2012
Hpy166II	GTNNAC	6 cut(s)	1074, 1597, 2029, 2158, 2451, 3040
Hpy188I	TCNGA	9 cut(s)	484, 1359, 1563, 1584, 1694, 1831, 2443, 2602, 2661
Hpy8I	GTNNAC	6 cut(s)	1074, 1597, 2029, 2158, 2451, 3040
HpyAV	CCTTC	8 cut(s)	841, 1543, 1560, 1835, 1900, 2138, 2609, 2943
HpyCH4IV	ACGT	4 cut(s)	6, 529, 1507, 2031
HpySE526I	ACGT	4 cut(s)	6, 529, 1507, 2031
Hsp92I	GRCGYC	2 cut(s)	882, 2031
HspAI	GCGC	4 cut(s)	703, 985, 2318, 3065
KflI	GGGWCCC	1 cut(s)	2560
Kpn2I	TCCGGA	1 cut(s)	1099
KpnI	GGTACC	1 cut(s)	1754
Ksp22I	TGATCA	1 cut(s)	613
Kzo9I	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
LguI	GCTCTTC	1 cut(s)	969
Lsp1109I	GCAGC	3 cut(s)	2236, 2614, 3097
LweI	GCATC	5 cut(s)	329, 1685, 1792, 2209, 3097
MabI	ACCWGGT	1 cut(s)	2327
MaeI	CTAG	8 cut(s)	168, 186, 270, 378, 1122, 2255, 2313, 2927
MaeII	ACGT	4 cut(s)	6, 529, 1507, 2031
MaeIII	GTNAC	6 cut(s)	402, 1280, 1633, 1911, 1984, 2323
MalI	GATC	7 cut(s)	615, 1460, 2278, 2343, 2673, 2796, 2856
MbiI	CCGCTC	2 cut(s)	1483, 1798
MboI	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
MfeI	CAATTG	1 cut(s)	1242
MflI	RGATCY	4 cut(s)	1458, 2276, 2671, 2794
MhlI	GDGCHC	4 cut(s)	1717, 2413, 2863, 3018
MlsI	TGGCCA	1 cut(s)	2828
MluNI	TGGCCA	1 cut(s)	2828
MlyI	GAGTC	2 cut(s)	404, 1919
MmeI	TCCRAC	3 cut(s)	489, 1205, 1945
Mox20I	TGGCCA	1 cut(s)	2828
Mph1103I	ATGCAT	3 cut(s)	461, 1807, 2355
MroI	TCCGGA	1 cut(s)	1099
MroXI	GAANNNNTTC	4 cut(s)	112, 630, 851, 2098
MscI	TGGCCA	1 cut(s)	2828
MseI	TTAA	8 cut(s)	636, 693, 1131, 1490, 1704, 2015, 2073, 2702
MslI	CAYNNNNRTG	6 cut(s)	1389, 1722, 1787, 1886, 2301, 3262
Msp20I	TGGCCA	1 cut(s)	2828
MspA1I	CMGCKG	1 cut(s)	176
MspI	CCGG	2 cut(s)	1100, 1623
MspR9I	CCNGG	4 cut(s)	231, 1475, 2329, 3151
MunI	CAATTG	1 cut(s)	1242
Mva1269I	GAATGC	1 cut(s)	1366
MvaI	CCWGG	4 cut(s)	231, 1475, 2329, 3151
NcoI	CCATGG	1 cut(s)	2524
NdeI	CATATG	1 cut(s)	1807
NdeII	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
NmeAIII	GCCGAG	1 cut(s)	1021
NmuCI	GTSAC	3 cut(s)	402, 1280, 1911
NsiI	ATGCAT	3 cut(s)	461, 1807, 2355
NspI	RCATGY	2 cut(s)	2353, 2738
NspV	TTCGAA	1 cut(s)	3001
OliI	CACNNNNGTG	2 cut(s)	1722, 3262
PaeI	GCATGC	1 cut(s)	2738
PagI	TCATGA	1 cut(s)	1390
PceI	AGGCCT	2 cut(s)	220, 1971
PciSI	GCTCTTC	1 cut(s)	969
PctI	GAATGC	1 cut(s)	1366
PdmI	GAANNNNTTC	4 cut(s)	112, 630, 851, 2098
PfeI	GAWTC	2 cut(s)	2577, 2718
PflFI	GACNNNGTC	2 cut(s)	1820, 2655
PflMI	CCANNNNNTGG	3 cut(s)	89, 413, 1892
PfoI	TCCNGGA	1 cut(s)	1473
PkrI	GCNGC	4 cut(s)	2251, 2629, 3112, 3256
PleI	GAGTC	2 cut(s)	403, 1918
PpsI	GAGTC	2 cut(s)	403, 1918
Ppu21I	YACGTR	1 cut(s)	1508
PpuMI	RGGWCCY	2 cut(s)	1175, 2560
PsiI	TTATAA	1 cut(s)	1161
Psp5II	RGGWCCY	2 cut(s)	1175, 2560
Psp6I	CCWGG	4 cut(s)	229, 1473, 2327, 3149
PspEI	GGTNACC	1 cut(s)	1984
PspGI	CCWGG	4 cut(s)	229, 1473, 2327, 3149
PspOMI	GGGCCC	1 cut(s)	1713
PspPI	GGNCC	9 cut(s)	227, 233, 344, 1175, 1349, 1713, 1714, 1727, 2560
PspPPI	RGGWCCY	2 cut(s)	1175, 2560
PsrI	GAACNNNNNNTAC	2 cut(s)	1080, 1112
PstI	CTGCAG	2 cut(s)	1759, 2500
PstNI	CAGNNNCTG	2 cut(s)	413, 1043
PsuI	RGATCY	4 cut(s)	1458, 2276, 2671, 2794
PsyI	GACNNNGTC	2 cut(s)	1820, 2655
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	7 cut(s)	264, 1112, 1308, 1752, 1768, 2113, 2749
RsaNI	GTAC	7 cut(s)	263, 1111, 1307, 1751, 1767, 2112, 2748
RseI	CAYNNNNRTG	6 cut(s)	1389, 1722, 1787, 1886, 2301, 3262
SapI	GCTCTTC	1 cut(s)	969
SaqAI	TTAA	8 cut(s)	636, 693, 1131, 1490, 1704, 2015, 2073, 2702
SatI	GCNGC	4 cut(s)	2250, 2628, 3111, 3255
Sau3AI	GATC	7 cut(s)	613, 1458, 2276, 2341, 2671, 2794, 2854
Sau96I	GGNCC	9 cut(s)	227, 233, 344, 1175, 1349, 1713, 1714, 1727, 2560
SchI	GAGTC	2 cut(s)	404, 1919
ScrFI	CCNGG	4 cut(s)	231, 1475, 2329, 3151
SduI	GDGCHC	4 cut(s)	1717, 2413, 2863, 3018
SexAI	ACCWGGT	1 cut(s)	2327
SfaNI	GCATC	5 cut(s)	329, 1685, 1792, 2209, 3097
SfcI	CTRYAG	5 cut(s)	327, 1462, 1755, 2496, 2679
SfuI	TTCGAA	1 cut(s)	3001
SinI	GGWCC	5 cut(s)	233, 1175, 1349, 1727, 2560
SmiMI	CAYNNNNRTG	6 cut(s)	1389, 1722, 1787, 1886, 2301, 3262
SmlI	CTYRAG	3 cut(s)	597, 908, 929
SmoI	CTYRAG	3 cut(s)	597, 908, 929
SpeI	ACTAGT	1 cut(s)	377
SphI	GCATGC	1 cut(s)	2738
SseBI	AGGCCT	2 cut(s)	220, 1971
SsiI	CCGC	6 cut(s)	1352, 1483, 1720, 1796, 2192, 2952
SspI	AATATT	2 cut(s)	1436, 2940
SspMI	CTAG	8 cut(s)	168, 186, 270, 378, 1122, 2255, 2313, 2927
StuI	AGGCCT	2 cut(s)	220, 1971
StyD4I	CCNGG	4 cut(s)	229, 1473, 2327, 3149
StyI	CCWWGG	5 cut(s)	1512, 1972, 2524, 2631, 2751
TaiI	ACGT	4 cut(s)	9, 532, 1510, 2034
TaqI	TCGA	4 cut(s)	1800, 2698, 3001, 3231
TatI	WGTACW	1 cut(s)	262
TfiI	GAWTC	2 cut(s)	2577, 2718
Tru1I	TTAA	8 cut(s)	636, 693, 1131, 1490, 1704, 2015, 2073, 2702
Tru9I	TTAA	8 cut(s)	636, 693, 1131, 1490, 1704, 2015, 2073, 2702
TseFI	GTSAC	3 cut(s)	402, 1280, 1911
TseI	GCWGC	4 cut(s)	2249, 2627, 3110, 3254
Tsp45I	GTSAC	3 cut(s)	402, 1280, 1911
TspGWI	ACGGA	3 cut(s)	1686, 2553, 3114
Tth111I	GACNNNGTC	2 cut(s)	1820, 2655
Van91I	CCANNNNNTGG	3 cut(s)	89, 413, 1892
VpaK11BI	GGWCC	5 cut(s)	233, 1175, 1349, 1727, 2560
XagI	CCTNNNNNAGG	1 cut(s)	2682
XapI	RAATTY	3 cut(s)	2078, 2402, 2821
XbaI	TCTAGA	1 cut(s)	2254
XceI	RCATGY	2 cut(s)	2353, 2738
XmiI	GTMKAC	2 cut(s)	1596, 2157
XmnI	GAANNNNTTC	4 cut(s)	112, 630, 851, 2098
XspI	CTAG	8 cut(s)	168, 186, 270, 378, 1122, 2255, 2313, 2927
ZraI	GACGTC	1 cut(s)	2032
Zsp2I	ATGCAT	3 cut(s)	461, 1807, 2355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.