Prupe.4G023700_v2.0.a1

Belongs to the CDP-alcohol phosphatidyltransferase class-I family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1122592 .. 1125490
2899 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G023700.2

Sequence Viewer

Length: 1029 bp
ATGGTGGTCTTCAGGTCCCTGAAAGCCCTAATTGAAAACCCTAAAAGATCGAGAACCTTCCTCACGGCCACAGCCTCATACATCTCGGCGCCTCTTCAATATCCTACTCTCTCTTACCCTCTCTCTCACCCTCTCTTTCGCTTGCCGTCTCAGATTTCTAGGACCTTTCTCTCTCCACTCTCCAATTGGATCATTCCTTTTCACGGACCGCTCTTCCTCTCTTGCCCTCCATGGAAGCTCTCGCAGTCCGCCACTCCGCTCTACCTTCGTGGGAACGGCGTCGTTCTCAGAAAGATCGAAGCTTCCTTAAGCTTGAATCTCATACGGAGGAGACCGAGCTTCCCGCTCCCATTTGAGGTCGGGTCACTCTCGCCTGCTCCGACCGTATTGGATCGTGGTGTCGGGTTGAAAGAGGCCAGTGATGATTTCGTCAATTTGCCCAATTTGATCTCCATAAGTCGAATGGTTTCGGGTCCTTTGCTTGGATGGATGATTGCAAATGAATGGTATTCTTCTGCAATGGTGGGGTTGGCTATCTCTGGGGCAACTGATTGGTTGGATGGATACATGGCTAGGAGGATGAAGATCAATTCTGTTGTTGGCTCCTACCTGGATCCCCTTGCTGACAAGGTTCTTATTGGATGCGTTGCTTTGGCCATGGTGCATGAGGGTCTTCTTCACCCTGGACTTGTTGGACTCATTGTGTTTCGCGATGTTGGTCTTGTTGGTGGTGCAGTATATCAAAGAGCTAGTAACTTGGAGTGGAAGTGGAAAAGTTGGTCCGACTTTTTCAACATTGGTGGAACCCGTCCCGAGAAGGTTGAACCGCTCTTTATTAGTAAGCTTAACACGGTCTTCCAGTTGATTTTAGTTGCGGCAGCTCTGCTTCAACCAGAGTTTGGAACCCAGGATACTCAAATATACATTACATACTTGAGTTGGTTAGTGGCATCAACAACAGTGACTTCTACAGCAGCATACGGAGCACAACACTTGAGGAGATCTGCATTGACTGCTCGGAAATCCTAA

Protein Analysis

343

Amino Acids

37.71

Weight (kDa)

9.82

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012905)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 88
AccB7I CCANNNNNTGG 1 cut(s) 899
AccBSI CCGCTC 4 cut(s) 211, 259, 346, 829
AccII CGCG 1 cut(s) 711
AciI CCGC 6 cut(s) 209, 249, 257, 344, 827, 875
AclWI GGATC 4 cut(s) 197, 399, 608, 621
AcoI YGGCCR 2 cut(s) 66, 654
AcyI GRCGYC 2 cut(s) 89, 279
AfiI CCNNNNNNNGG 4 cut(s) 203, 355, 482, 899
AflII CTTAAG 1 cut(s) 307
AgsI TTSAA 7 cut(s) 35, 98, 316, 409, 793, 824, 890
AjnI CCWGG 3 cut(s) 609, 682, 906
AluBI AGCT 7 cut(s) 238, 302, 312, 339, 749, 844, 881
AluI AGCT 7 cut(s) 238, 302, 312, 339, 749, 844, 881
Alw21I GWGCWC 1 cut(s) 988
Alw26I GTCTC 2 cut(s) 153, 325
AlwI GGATC 4 cut(s) 197, 399, 608, 621
Ama87I CYCGRG 1 cut(s) 812
AoxI GGCC 3 cut(s) 66, 414, 654
ApeKI GCWGC 2 cut(s) 878, 974
Asp700I GAANNNNTTC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 91
AspS9I GGNCC 5 cut(s) 15, 162, 206, 473, 780
AsuHPI GGTGA 2 cut(s) 119, 671
AvaI CYCGRG 1 cut(s) 812
AvaII GGWCC 5 cut(s) 15, 162, 206, 473, 780
BalI TGGCCA 1 cut(s) 656
BamHI GGATCC 1 cut(s) 613
BanI GGYRCC 1 cut(s) 88
BbsI GAAGAC 2 cut(s) 665, 847
Bbv12I GWGCWC 1 cut(s) 988
BbvI GCAGC 2 cut(s) 890, 986
BccI CCATC 2 cut(s) 480, 554
BceAI ACGGC 3 cut(s) 81, 130, 292
BciT130I CCWGG 3 cut(s) 611, 684, 908
BciVI GTATCC 2 cut(s) 557, 904
BcoDI GTCTC 2 cut(s) 153, 325
BfaI CTAG 3 cut(s) 159, 573, 750
BfmI CTRYAG 1 cut(s) 969
BfoI RGCGCY 1 cut(s) 92
BfrI CTTAAG 1 cut(s) 307
BfuI GTATCC 2 cut(s) 557, 904
BglII AGATCT 1 cut(s) 1001
BisI GCNGC 3 cut(s) 876, 879, 975
BlsI GCNGC 3 cut(s) 877, 880, 976
Bme1390I CCNGG 3 cut(s) 611, 684, 908
Bme18I GGWCC 5 cut(s) 15, 162, 206, 473, 780
BmeT110I CYCGRG 1 cut(s) 812
BmgT120I GGNCC 5 cut(s) 15, 162, 206, 473, 780
BmiI GGNNCC 7 cut(s) 17, 90, 474, 604, 615, 805, 904
BmrFI CCNGG 3 cut(s) 611, 684, 908
BmsI GCATC 2 cut(s) 632, 959
BpiI GAAGAC 2 cut(s) 665, 847
BpuEI CTTGAG 2 cut(s) 955, 1015
BsaBI GATNNNNATC 1 cut(s) 584
BsaHI GRCGYC 2 cut(s) 89, 279
BsaI GGTCTC 1 cut(s) 325
BsaJI CCNNGG 4 cut(s) 230, 657, 682, 906
BsaXI ACNNNNNCTCC 2 cut(s) 752, 782
Bsc4I CCNNNNNNNGG 4 cut(s) 203, 355, 482, 899
Bse1I ACTGG 2 cut(s) 417, 859
Bse3DI GCAATG 1 cut(s) 525
Bse8I GATNNNNATC 1 cut(s) 584
BseBI CCWGG 3 cut(s) 611, 684, 908
BseDI CCNNGG 4 cut(s) 230, 657, 682, 906
BseGI GGATG 5 cut(s) 491, 495, 565, 585, 647
BseJI GATNNNNATC 1 cut(s) 584
BseLI CCNNNNNNNGG 4 cut(s) 203, 355, 482, 899
BseMI GCAATG 1 cut(s) 525
BseMII CTCAG 2 cut(s) 164, 301
BseNI ACTGG 2 cut(s) 417, 859
BseRI GAGGAG 2 cut(s) 343, 1012
BseXI GCAGC 2 cut(s) 890, 986
BsgI GTGCAG 1 cut(s) 753
Bsh1236I CGCG 1 cut(s) 711
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 3 cut(s) 68, 416, 656
BshNI GGYRCC 1 cut(s) 88
BsiEI CGRYCG 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 988
BsiHKCI CYCGRG 1 cut(s) 812
BslFI GGGAC 1 cut(s) 795
BslI CCNNNNNNNGG 4 cut(s) 203, 355, 482, 899
BsmAI GTCTC 2 cut(s) 153, 325
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 795
BsnI GGCC 3 cut(s) 68, 416, 656
Bso31I GGTCTC 1 cut(s) 325
BsoBI CYCGRG 1 cut(s) 812
Bsp1286I GDGCHC 1 cut(s) 988
Bsp143I GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
Bsp19I CCATGG 2 cut(s) 230, 657
Bsp68I TCGCGA 1 cut(s) 711
BspACI CCGC 6 cut(s) 209, 249, 257, 344, 827, 875
BspANI GGCC 3 cut(s) 68, 416, 656
BspCNI CTCAG 2 cut(s) 163, 300
BspFNI CGCG 1 cut(s) 711
BspLI GGNNCC 7 cut(s) 17, 90, 474, 604, 615, 805, 904
BspPI GGATC 4 cut(s) 197, 399, 608, 621
BspQI GCTCTTC 1 cut(s) 218
BspT107I GGYRCC 1 cut(s) 88
BspTI CTTAAG 1 cut(s) 307
BspTNI GGTCTC 1 cut(s) 325
BsrBI CCGCTC 4 cut(s) 211, 259, 346, 829
BsrDI GCAATG 1 cut(s) 525
BsrI ACTGG 2 cut(s) 417, 859
BssECI CCNNGG 4 cut(s) 230, 657, 682, 906
BssMI GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
BssNI GRCGYC 2 cut(s) 89, 279
BssT1I CCWWGG 2 cut(s) 230, 657
Bst2UI CCWGG 3 cut(s) 611, 684, 908
Bst4CI ACNGT 3 cut(s) 385, 853, 961
Bst6I CTCTTC 2 cut(s) 99, 218
BstACI GRCGYC 2 cut(s) 89, 279
BstAFI CTTAAG 1 cut(s) 307
BstAPI GCANNNNNTGC 1 cut(s) 1013
BstC8I GCNNGC 2 cut(s) 143, 375
BstDEI CTNAG 2 cut(s) 150, 287
BstDSI CCRYGG 2 cut(s) 230, 657
BstF5I GGATG 5 cut(s) 491, 495, 565, 585, 647
BstFNI CGCG 1 cut(s) 711
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 1 cut(s) 91
BstKTI GATC 8 cut(s) 50, 192, 297, 394, 450, 588, 616, 1004
BstMAI GTCTC 2 cut(s) 153, 325
BstMBI GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 2 cut(s) 983, 1013
BstNI CCWGG 3 cut(s) 611, 684, 908
BstSCI CCNGG 3 cut(s) 609, 682, 906
BstSFI CTRYAG 1 cut(s) 969
BstUI CGCG 1 cut(s) 711
BstV1I GCAGC 2 cut(s) 890, 986
BstV2I GAAGAC 2 cut(s) 665, 847
BstX2I RGATCY 2 cut(s) 613, 1001
BstYI RGATCY 2 cut(s) 613, 1001
BsuI GTATCC 2 cut(s) 557, 904
BsuRI GGCC 3 cut(s) 68, 416, 656
BtgI CCRYGG 2 cut(s) 230, 657
BtgZI GCGATG 1 cut(s) 726
BtsCI GGATG 5 cut(s) 491, 495, 565, 585, 647
BtsIMutI CAGTG 2 cut(s) 424, 966
BtuMI TCGCGA 1 cut(s) 711
Cac8I GCNNGC 2 cut(s) 143, 375
CfoI GCGC 1 cut(s) 91
Cfr13I GGNCC 5 cut(s) 15, 162, 206, 473, 780
CpoI CGGWCCG 1 cut(s) 206
CseI GACGC 1 cut(s) 268
CspCI CAANNNNNGTGG 2 cut(s) 781, 816
CspI CGGWCCG 1 cut(s) 206
CviAII CATG 4 cut(s) 231, 568, 658, 665
DdeI CTNAG 2 cut(s) 150, 287
DinI GGCGCC 1 cut(s) 90
DpnI GATC 8 cut(s) 49, 191, 296, 393, 449, 587, 615, 1003
DpnII GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
EaeI YGGCCR 2 cut(s) 66, 654
Eam1104I CTCTTC 2 cut(s) 99, 218
EarI CTCTTC 2 cut(s) 99, 218
EciI GGCGGA 1 cut(s) 238
Eco130I CCWWGG 2 cut(s) 230, 657
Eco31I GGTCTC 1 cut(s) 325
Eco47I GGWCC 5 cut(s) 15, 162, 206, 473, 780
Eco88I CYCGRG 1 cut(s) 812
EcoO109I RGGNCCY 3 cut(s) 15, 162, 473
EcoRII CCWGG 3 cut(s) 609, 682, 906
EcoT14I CCWWGG 2 cut(s) 230, 657
EgeI GGCGCC 1 cut(s) 90
EheI GGCGCC 1 cut(s) 90
ErhI CCWWGG 2 cut(s) 230, 657
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 4 cut(s) 234, 571, 661, 668
FaqI GGGAC 1 cut(s) 795
FatI CATG 4 cut(s) 230, 567, 657, 664
FauI CCCGC 1 cut(s) 351
Fnu4HI GCNGC 3 cut(s) 876, 879, 975
FokI GGATG 5 cut(s) 498, 502, 572, 592, 654
Fsp4HI GCNGC 3 cut(s) 876, 879, 975
FspBI CTAG 3 cut(s) 159, 573, 750
GlaI GCGC 1 cut(s) 90
GluI GCNGC 3 cut(s) 876, 879, 975
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 3 cut(s) 68, 416, 656
HgaI GACGC 1 cut(s) 268
HhaI GCGC 1 cut(s) 91
Hin1I GRCGYC 2 cut(s) 89, 279
Hin1II CATG 4 cut(s) 234, 571, 661, 668
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
HindIII AAGCTT 3 cut(s) 300, 310, 842
HinfI GANTC 2 cut(s) 316, 696
HphI GGTGA 2 cut(s) 119, 671
Hpy188I TCNGA 5 cut(s) 153, 290, 381, 784, 1020
Hpy188III TCNNGA 3 cut(s) 51, 710, 812
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 3 cut(s) 67, 275, 811
HpyCH4III ACNGT 3 cut(s) 385, 853, 961
HpyCH4V TGCA 5 cut(s) 497, 518, 664, 734, 1007
HpyF10VI GCNNNNNNNGC 2 cut(s) 983, 1013
HpyF3I CTNAG 2 cut(s) 150, 287
Hsp92I GRCGYC 2 cut(s) 89, 279
Hsp92II CATG 4 cut(s) 234, 571, 661, 668
HspAI GCGC 1 cut(s) 89
KasI GGCGCC 1 cut(s) 88
Kzo9I GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
LguI GCTCTTC 1 cut(s) 218
LmnI GCTCC 4 cut(s) 351, 382, 608, 983
Lsp1109I GCAGC 2 cut(s) 890, 986
LweI GCATC 2 cut(s) 632, 959
MaeI CTAG 3 cut(s) 159, 573, 750
MaeIII GTNAC 3 cut(s) 363, 752, 961
MalI GATC 8 cut(s) 49, 191, 296, 393, 449, 587, 615, 1003
MbiI CCGCTC 4 cut(s) 211, 259, 346, 829
MboI GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
MboII GAAGA 7 cut(s) 86, 205, 504, 595, 665, 668, 847
MfeI CAATTG 1 cut(s) 184
MflI RGATCY 2 cut(s) 613, 1001
MhlI GDGCHC 1 cut(s) 988
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 5 cut(s) 30, 184, 433, 442, 589
MluNI TGGCCA 1 cut(s) 656
Mly113I GGCGCC 1 cut(s) 89
MlyI GAGTC 1 cut(s) 690
MmeI TCCRAC 4 cut(s) 404, 537, 673, 807
Mox20I TGGCCA 1 cut(s) 656
MroXI GAANNNNTTC 1 cut(s) 466
MscI TGGCCA 1 cut(s) 656
MseI TTAA 2 cut(s) 308, 846
Msp20I TGGCCA 1 cut(s) 656
MspCI CTTAAG 1 cut(s) 307
MspR9I CCNGG 3 cut(s) 611, 684, 908
MunI CAATTG 1 cut(s) 184
MvaI CCWGG 3 cut(s) 611, 684, 908
MvnI CGCG 1 cut(s) 711
MwoI GCNNNNNNNGC 2 cut(s) 983, 1013
NarI GGCGCC 1 cut(s) 89
NcoI CCATGG 2 cut(s) 230, 657
NdeII GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
NlaIII CATG 4 cut(s) 234, 571, 661, 668
NlaIV GGNNCC 7 cut(s) 17, 90, 474, 604, 615, 805, 904
NmeAIII GCCGAG 1 cut(s) 65
NmuCI GTSAC 2 cut(s) 363, 961
NruI TCGCGA 1 cut(s) 711
PciSI GCTCTTC 1 cut(s) 218
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PdmI GAANNNNTTC 1 cut(s) 466
PfeI GAWTC 1 cut(s) 316
PflMI CCANNNNNTGG 1 cut(s) 899
PkrI GCNGC 3 cut(s) 877, 880, 976
PleI GAGTC 1 cut(s) 690
PluTI GGCGCC 1 cut(s) 92
PpsI GAGTC 1 cut(s) 690
PpuMI RGGWCCY 3 cut(s) 15, 162, 473
Psp5II RGGWCCY 3 cut(s) 15, 162, 473
Psp6I CCWGG 3 cut(s) 609, 682, 906
PspGI CCWGG 3 cut(s) 609, 682, 906
PspN4I GGNNCC 7 cut(s) 17, 90, 474, 604, 615, 805, 904
PspPI GGNCC 5 cut(s) 15, 162, 206, 473, 780
PspPPI RGGWCCY 3 cut(s) 15, 162, 473
PsrI GAACNNNNNNTAC 2 cut(s) 895, 927
PsuI RGATCY 2 cut(s) 613, 1001
RruI TCGCGA 1 cut(s) 711
Rsr2I CGGWCCG 1 cut(s) 206
RsrII CGGWCCG 1 cut(s) 206
SapI GCTCTTC 1 cut(s) 218
SaqAI TTAA 2 cut(s) 308, 846
SatI GCNGC 3 cut(s) 876, 879, 975
Sau3AI GATC 8 cut(s) 47, 189, 294, 391, 447, 585, 613, 1001
Sau96I GGNCC 5 cut(s) 15, 162, 206, 473, 780
SchI GAGTC 1 cut(s) 690
ScrFI CCNGG 3 cut(s) 611, 684, 908
SduI GDGCHC 1 cut(s) 988
SfaNI GCATC 2 cut(s) 632, 959
SfcI CTRYAG 1 cut(s) 969
SfoI GGCGCC 1 cut(s) 90
SinI GGWCC 5 cut(s) 15, 162, 206, 473, 780
SmlI CTYRAG 3 cut(s) 307, 934, 994
SmoI CTYRAG 3 cut(s) 307, 934, 994
Sse9I AATT 5 cut(s) 30, 184, 433, 442, 589
SsiI CCGC 6 cut(s) 209, 249, 257, 344, 827, 875
SspDI GGCGCC 1 cut(s) 88
SspMI CTAG 3 cut(s) 159, 573, 750
StyD4I CCNGG 3 cut(s) 609, 682, 906
StyI CCWWGG 2 cut(s) 230, 657
TaaI ACNGT 3 cut(s) 385, 853, 961
TaqI TCGA 3 cut(s) 50, 297, 460
TaqII GACCGA 1 cut(s) 349
TasI AATT 5 cut(s) 30, 184, 433, 442, 589
TauI GCSGC 1 cut(s) 878
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 2 cut(s) 308, 846
Tru9I TTAA 2 cut(s) 308, 846
TscAI CASTG 2 cut(s) 424, 966
TseFI GTSAC 2 cut(s) 363, 961
TseI GCWGC 2 cut(s) 878, 974
Tsp45I GTSAC 2 cut(s) 363, 961
TspDTI ATGAA 2 cut(s) 516, 596
TspGWI ACGGA 3 cut(s) 219, 340, 996
TspRI CASTG 2 cut(s) 424, 966
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 1 cut(s) 307
VpaK11BI GGWCC 5 cut(s) 15, 162, 206, 473, 780
XcmI CCANNNNNNNNNTGG 2 cut(s) 183, 460
XmnI GAANNNNTTC 1 cut(s) 466
XspI CTAG 3 cut(s) 159, 573, 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.