pycom05g31260

Belongs to the CDP-alcohol phosphatidyltransferase class-I family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
31067407 .. 31069641
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g31260.5

Sequence Viewer

Length: 1215 bp
ATGGAAGAAAGTACTAAGCTCGATGAAAATTGGTACGGGCCTCAGTTGATGGACTACAATAGCAAAGAGAATTCCACGTGTAAGAAAACAAGAGAGCCAGGCTATTGCCACGTGTCATTCAGACCGCAAGGCCGACTTACAGTTAAGAACCTTCCTTCCCCAGAATGCTTCAGTTCAGTCATGGCGGGCTTCCGGTCCTTGAAATCCCTAATCCAAAACCCTAAAAAATCAAGAACCTTCGTCACTGCCACCGCCTCCTCCTCCTCCATCTCCGCCCCTCTTCACTACTCTCCTCTCTCCTACCCTCTCTCCCACCCCCTCGTCCGATTGCCGTCTCAGATTTCCAGGTCCTTCCTCTCTCCGCTTTCCAATTGGATCGTTCCTTTTCACGGACCGCTCTTCCTCTCTTTCCCTCCATGGAAGCTCTCGCAGTCCTCCACTCCGCTTTACATTGGCGGAAACGCCGTCGTTCTCAGAAAGATCGAAGCTTCATTGAACTTGAACCTGCTAAGGAGGAGACCGAGCTTCCCGCTCCCATTGGAAGTTGGGTCACTATCGCCGGCTCCGACGGTCGTGGATCGCCGTGTCGGGTTGAAAGAGGGCGCTGACGATTTCGTCAATTTGCCCAATTTGATCTCCATGAGTCGGTTGATTTCAGGTCCTTTCCTTGGATGGATGATCACGAATGAATGGTACTCTTCTGCAATGGCGGGGTTGGTTATCTCTGGGGCAACTGATTGGTTGGATGGATACATGGCTAGGAGGATGAAGATCAATTCTATTGTTGGGTCCTATCTGGATCCCCTTGCTGACAAGGTTCTTATTGGATGCGTTGCTCTGGCCTTGGTACATAAGGGTCTTCTTCATCCTGGACTTGTTGGGCTCATTGTGCTCCGGGATGTTGGGCTTGTTGGTGGTGCAGTATATCAAAGAGCTAGTAGCTTGGGGTGGAAGTGGAATGGTTGGTCCGACTTTTTCAACCTTGATGAAACCCGCCCTGAGAAGGTGGAACCTCTCTTTATTAGTAAGCTTAACACAGTCTTCCAGCTTATTTTAGTTGCGGCAGTTCTTCTTCAACCGGAGTTTGGAACACAAGAAACTCAGTCATACATCACATACCTGAGTTGGTTAGTTGCATCAACAACAGTGGCTTCTTCAGCAGCATACGGCGCCCAACACTTGAGGAGATCTGCATTGATCGCTCGGAAATCGTAA

Protein Analysis

405

Amino Acids

44.59

Weight (kDa)

9.59

Isoelectric Point (pI)

51.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012905)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 614
Acc36I ACCTGC 1 cut(s) 513
AccB1I GGYRCC 1 cut(s) 1169
AccBSI CCGCTC 2 cut(s) 397, 532
AclWI GGATC 4 cut(s) 383, 585, 794, 807
AcsI RAATTY 1 cut(s) 70
AcuI CTGAAG 2 cut(s) 154, 1140
AcvI CACGTG 2 cut(s) 78, 112
AcyI GRCGYC 1 cut(s) 1170
AfaI GTAC 4 cut(s) 13, 35, 695, 849
AfiI CCNNNNNNNGG 5 cut(s) 389, 645, 668, 1003, 1085
AflIII ACRYGT 2 cut(s) 77, 111
AgsI TTSAA 6 cut(s) 202, 496, 502, 595, 979, 1076
AjnI CCWGG 3 cut(s) 97, 344, 868
AloI GAACNNNNNNTCC 2 cut(s) 140, 172
AluBI AGCT 8 cut(s) 19, 424, 488, 525, 935, 942, 1030, 1048
AluI AGCT 8 cut(s) 19, 424, 488, 525, 935, 942, 1030, 1048
Alw21I GWGCWC 1 cut(s) 894
Alw26I GTCTC 2 cut(s) 339, 511
AlwI GGATC 4 cut(s) 383, 585, 794, 807
AoxI GGCC 3 cut(s) 38, 130, 840
ApeKI GCWGC 1 cut(s) 1160
ApoI RAATTY 1 cut(s) 70
AspLEI GCGC 2 cut(s) 605, 1172
AspS9I GGNCC 7 cut(s) 38, 195, 348, 392, 659, 789, 966
AsuC2I CCSGG 1 cut(s) 896
AvaII GGWCC 6 cut(s) 195, 348, 392, 659, 789, 966
BamHI GGATCC 1 cut(s) 799
BanI GGYRCC 1 cut(s) 1169
BanII GRGCYC 1 cut(s) 885
BbrPI CACGTG 2 cut(s) 78, 112
BbsI GAAGAC 2 cut(s) 851, 1033
Bbv12I GWGCWC 1 cut(s) 894
BbvI GCAGC 1 cut(s) 1172
BccI CCATC 4 cut(s) 43, 275, 666, 740
BceAI ACGGC 4 cut(s) 316, 449, 567, 1183
BciT130I CCWGG 3 cut(s) 99, 346, 870
BciVI GTATCC 1 cut(s) 743
BclI TGATCA 1 cut(s) 678
BcnI CCSGG 1 cut(s) 896
BcoDI GTCTC 2 cut(s) 339, 511
BfaI CTAG 2 cut(s) 759, 936
BfoI RGCGCY 2 cut(s) 606, 1173
BfuAI ACCTGC 1 cut(s) 513
BfuI GTATCC 1 cut(s) 743
BglII AGATCT 1 cut(s) 1187
BisI GCNGC 2 cut(s) 1062, 1161
BlsI GCNGC 2 cut(s) 1063, 1162
BmcAI AGTACT 1 cut(s) 13
Bme1390I CCNGG 4 cut(s) 99, 346, 870, 896
Bme18I GGWCC 6 cut(s) 195, 348, 392, 659, 789, 966
BmgT120I GGNCC 7 cut(s) 38, 195, 348, 392, 659, 789, 966
BmiI GGNNCC 5 cut(s) 564, 790, 801, 1011, 1171
BmrFI CCNGG 4 cut(s) 99, 346, 870, 896
BmsI GCATC 2 cut(s) 818, 1145
BpiI GAAGAC 2 cut(s) 851, 1033
Bpu10I CCTNAGC 1 cut(s) 509
BpuEI CTTGAG 1 cut(s) 1201
BpuMI CCSGG 1 cut(s) 896
BsaAI YACGTR 2 cut(s) 78, 112
BsaBI GATNNNNATC 1 cut(s) 770
BsaHI GRCGYC 1 cut(s) 1170
BsaI GGTCTC 1 cut(s) 511
BsaJI CCNNGG 3 cut(s) 416, 667, 843
BsaWI WCCGGW 2 cut(s) 192, 1078
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 5 cut(s) 389, 645, 668, 1003, 1085
Bse118I RCCGGY 1 cut(s) 559
Bse3DI GCAATG 1 cut(s) 711
Bse8I GATNNNNATC 1 cut(s) 770
BseBI CCWGG 3 cut(s) 99, 346, 870
BseDI CCNNGG 3 cut(s) 416, 667, 843
BseGI GGATG 7 cut(s) 677, 681, 751, 771, 833, 865, 904
BseJI GATNNNNATC 1 cut(s) 770
BseLI CCNNNNNNNGG 5 cut(s) 389, 645, 668, 1003, 1085
BseMI GCAATG 1 cut(s) 711
BseMII CTCAG 6 cut(s) 56, 350, 487, 990, 1112, 1115
BseRI GAGGAG 6 cut(s) 247, 250, 253, 282, 529, 1198
BseXI GCAGC 1 cut(s) 1172
BsgI GTGCAG 1 cut(s) 939
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 3 cut(s) 40, 132, 842
BshNI GGYRCC 1 cut(s) 1169
BsiEI CGRYCG 1 cut(s) 573
BsiHKAI GWGCWC 1 cut(s) 894
BsiSI CCGG 4 cut(s) 193, 560, 895, 1079
BslI CCNNNNNNNGG 5 cut(s) 389, 645, 668, 1003, 1085
BsmAI GTCTC 2 cut(s) 339, 511
BsmBI CGTCTC 1 cut(s) 339
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 3 cut(s) 40, 132, 842
Bso31I GGTCTC 1 cut(s) 511
Bsp1286I GDGCHC 2 cut(s) 885, 894
Bsp143I GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
Bsp19I CCATGG 1 cut(s) 416
BspANI GGCC 3 cut(s) 40, 132, 842
BspCNI CTCAG 6 cut(s) 55, 349, 486, 991, 1113, 1114
BspLI GGNNCC 5 cut(s) 564, 790, 801, 1011, 1171
BspMI ACCTGC 1 cut(s) 513
BspPI GGATC 4 cut(s) 383, 585, 794, 807
BspQI GCTCTTC 1 cut(s) 404
BspT107I GGYRCC 1 cut(s) 1169
BspTNI GGTCTC 1 cut(s) 511
BsrBI CCGCTC 2 cut(s) 397, 532
BsrDI GCAATG 1 cut(s) 711
BsrFI RCCGGY 1 cut(s) 559
BssAI RCCGGY 1 cut(s) 559
BssECI CCNNGG 3 cut(s) 416, 667, 843
BssMI GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
BssNI GRCGYC 1 cut(s) 1170
BssT1I CCWWGG 3 cut(s) 416, 667, 843
Bst2UI CCWGG 3 cut(s) 99, 346, 870
Bst4CI ACNGT 4 cut(s) 142, 571, 1039, 1147
Bst6I CTCTTC 3 cut(s) 285, 404, 703
BstACI GRCGYC 1 cut(s) 1170
BstBAI YACGTR 2 cut(s) 78, 112
BstC8I GCNNGC 2 cut(s) 187, 561
BstDEI CTNAG 8 cut(s) 15, 42, 336, 473, 509, 999, 1101, 1121
BstDSI CCRYGG 1 cut(s) 416
BstF5I GGATG 7 cut(s) 677, 681, 751, 771, 833, 865, 904
BstH2I RGCGCY 2 cut(s) 606, 1173
BstHHI GCGC 2 cut(s) 605, 1172
BstKTI GATC 9 cut(s) 378, 483, 580, 636, 681, 774, 802, 1190, 1200
BstMAI GTCTC 2 cut(s) 339, 511
BstMBI GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 4 cut(s) 889, 1157, 1169, 1199
BstNI CCWGG 3 cut(s) 99, 346, 870
BstSCI CCNGG 4 cut(s) 97, 344, 868, 894
BstV1I GCAGC 1 cut(s) 1172
BstV2I GAAGAC 2 cut(s) 851, 1033
BstX2I RGATCY 2 cut(s) 799, 1187
BstYI RGATCY 2 cut(s) 799, 1187
BsuI GTATCC 1 cut(s) 743
BsuRI GGCC 3 cut(s) 40, 132, 842
BtgI CCRYGG 1 cut(s) 416
BtsCI GGATG 7 cut(s) 677, 681, 751, 771, 833, 865, 904
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 2 cut(s) 243, 1152
BveI ACCTGC 1 cut(s) 513
Cac8I GCNNGC 2 cut(s) 187, 561
CfoI GCGC 2 cut(s) 605, 1172
Cfr10I RCCGGY 1 cut(s) 559
Cfr13I GGNCC 7 cut(s) 38, 195, 348, 392, 659, 789, 966
CpoI CGGWCCG 1 cut(s) 392
Csp6I GTAC 4 cut(s) 12, 34, 694, 848
CspCI CAANNNNNGTGG 2 cut(s) 1128, 1163
CspI CGGWCCG 1 cut(s) 392
CviAII CATG 4 cut(s) 181, 417, 640, 754
CviQI GTAC 4 cut(s) 12, 34, 694, 848
DdeI CTNAG 8 cut(s) 15, 42, 336, 473, 509, 999, 1101, 1121
DinI GGCGCC 1 cut(s) 1171
DpnI GATC 9 cut(s) 377, 482, 579, 635, 680, 773, 801, 1189, 1199
DpnII GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
DrdI GACNNNNNNGTC 1 cut(s) 614
DseDI GACNNNNNNGTC 1 cut(s) 614
Eam1104I CTCTTC 3 cut(s) 285, 404, 703
EarI CTCTTC 3 cut(s) 285, 404, 703
EciI GGCGGA 2 cut(s) 262, 471
Eco130I CCWWGG 3 cut(s) 416, 667, 843
Eco24I GRGCYC 1 cut(s) 885
Eco31I GGTCTC 1 cut(s) 511
Eco47I GGWCC 6 cut(s) 195, 348, 392, 659, 789, 966
Eco57I CTGAAG 2 cut(s) 154, 1140
Eco72I CACGTG 2 cut(s) 78, 112
EcoO109I RGGNCCY 3 cut(s) 348, 659, 789
EcoRI GAATTC 1 cut(s) 70
EcoRII CCWGG 3 cut(s) 97, 344, 868
EcoT14I CCWWGG 3 cut(s) 416, 667, 843
EcoT38I GRGCYC 1 cut(s) 885
EgeI GGCGCC 1 cut(s) 1171
EheI GGCGCC 1 cut(s) 1171
ErhI CCWWGG 3 cut(s) 416, 667, 843
Esp3I CGTCTC 1 cut(s) 339
FaeI CATG 4 cut(s) 184, 420, 643, 757
FaiI YATR 9 cut(s) 182, 418, 641, 755, 852, 925, 1108, 1117, 1165
FalI AAGNNNNNCTT 2 cut(s) 120, 152
FatI CATG 4 cut(s) 180, 416, 639, 753
FauI CCCGC 4 cut(s) 178, 537, 703, 1001
FbaI TGATCA 1 cut(s) 678
Fnu4HI GCNGC 2 cut(s) 1062, 1161
FokI GGATG 7 cut(s) 684, 688, 758, 778, 840, 852, 911
FriOI GRGCYC 1 cut(s) 885
Fsp4HI GCNGC 2 cut(s) 1062, 1161
FspBI CTAG 2 cut(s) 759, 936
GlaI GCGC 2 cut(s) 604, 1171
GluI GCNGC 2 cut(s) 1062, 1161
HaeII RGCGCY 2 cut(s) 606, 1173
HaeIII GGCC 3 cut(s) 40, 132, 842
HapII CCGG 4 cut(s) 193, 560, 895, 1079
HhaI GCGC 2 cut(s) 605, 1172
Hin1I GRCGYC 1 cut(s) 1170
Hin1II CATG 4 cut(s) 184, 420, 643, 757
Hin6I GCGC 2 cut(s) 603, 1170
HinP1I GCGC 2 cut(s) 603, 1170
HindIII AAGCTT 2 cut(s) 486, 1028
HinfI GANTC 1 cut(s) 643
HpaII CCGG 4 cut(s) 193, 560, 895, 1079
Hpy188I TCNGA 7 cut(s) 122, 326, 339, 476, 567, 970, 1206
Hpy188III TCNNGA 3 cut(s) 231, 682, 797
Hpy99I CGWCG 2 cut(s) 470, 571
HpyAV CCTTC 5 cut(s) 161, 165, 247, 361, 997
HpyCH4III ACNGT 4 cut(s) 142, 571, 1039, 1147
HpyCH4IV ACGT 2 cut(s) 77, 111
HpyCH4V TGCA 4 cut(s) 704, 920, 1136, 1193
HpyF10VI GCNNNNNNNGC 4 cut(s) 889, 1157, 1169, 1199
HpyF3I CTNAG 8 cut(s) 15, 42, 336, 473, 509, 999, 1101, 1121
HpySE526I ACGT 2 cut(s) 77, 111
Hsp92I GRCGYC 1 cut(s) 1170
Hsp92II CATG 4 cut(s) 184, 420, 643, 757
HspAI GCGC 2 cut(s) 603, 1170
KasI GGCGCC 1 cut(s) 1169
KroI GCCGGC 1 cut(s) 559
KroNI GCCGGC 1 cut(s) 561
Ksp22I TGATCA 1 cut(s) 678
Kzo9I GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
LguI GCTCTTC 1 cut(s) 404
LmnI GCTCC 3 cut(s) 537, 568, 897
Lsp1109I GCAGC 1 cut(s) 1172
LweI GCATC 2 cut(s) 818, 1145
MaeI CTAG 2 cut(s) 759, 936
MaeII ACGT 2 cut(s) 77, 111
MaeIII GTNAC 2 cut(s) 241, 549
MalI GATC 9 cut(s) 377, 482, 579, 635, 680, 773, 801, 1189, 1199
MbiI CCGCTC 2 cut(s) 397, 532
MboI GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
MfeI CAATTG 1 cut(s) 370
MflI RGATCY 2 cut(s) 799, 1187
MhlI GDGCHC 2 cut(s) 885, 894
MluCI AATT 6 cut(s) 28, 70, 370, 619, 628, 775
Mly113I GGCGCC 1 cut(s) 1170
MlyI GAGTC 1 cut(s) 652
MmeI TCCRAC 3 cut(s) 590, 723, 993
MroNI GCCGGC 1 cut(s) 559
MseI TTAA 2 cut(s) 144, 1032
MspI CCGG 4 cut(s) 193, 560, 895, 1079
MspR9I CCNGG 4 cut(s) 99, 346, 870, 896
MunI CAATTG 1 cut(s) 370
Mva1269I GAATGC 1 cut(s) 170
MvaI CCWGG 3 cut(s) 99, 346, 870
MwoI GCNNNNNNNGC 4 cut(s) 889, 1157, 1169, 1199
NaeI GCCGGC 1 cut(s) 561
NarI GGCGCC 1 cut(s) 1170
NciI CCSGG 1 cut(s) 896
NcoI CCATGG 1 cut(s) 416
NdeII GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
NgoMIV GCCGGC 1 cut(s) 559
NlaIII CATG 4 cut(s) 184, 420, 643, 757
NlaIV GGNNCC 5 cut(s) 564, 790, 801, 1011, 1171
NmuCI GTSAC 2 cut(s) 241, 549
PciSI GCTCTTC 1 cut(s) 404
PcsI WCGNNNNNNNCGW 1 cut(s) 563
PctI GAATGC 1 cut(s) 170
PdiI GCCGGC 1 cut(s) 561
PfoI TCCNGGA 2 cut(s) 868, 894
PkrI GCNGC 2 cut(s) 1063, 1162
PleI GAGTC 1 cut(s) 651
PluTI GGCGCC 1 cut(s) 1173
PmaCI CACGTG 2 cut(s) 78, 112
PmlI CACGTG 2 cut(s) 78, 112
PpsI GAGTC 1 cut(s) 651
Ppu21I YACGTR 2 cut(s) 78, 112
PpuMI RGGWCCY 3 cut(s) 348, 659, 789
Psp5II RGGWCCY 3 cut(s) 348, 659, 789
Psp6I CCWGG 3 cut(s) 97, 344, 868
PspCI CACGTG 2 cut(s) 78, 112
PspGI CCWGG 3 cut(s) 97, 344, 868
PspN4I GGNNCC 5 cut(s) 564, 790, 801, 1011, 1171
PspPI GGNCC 7 cut(s) 38, 195, 348, 392, 659, 789, 966
PspPPI RGGWCCY 3 cut(s) 348, 659, 789
PsuI RGATCY 2 cut(s) 799, 1187
RsaI GTAC 4 cut(s) 13, 35, 695, 849
RsaNI GTAC 4 cut(s) 12, 34, 694, 848
Rsr2I CGGWCCG 1 cut(s) 392
RsrII CGGWCCG 1 cut(s) 392
SapI GCTCTTC 1 cut(s) 404
SaqAI TTAA 2 cut(s) 144, 1032
SatI GCNGC 2 cut(s) 1062, 1161
Sau3AI GATC 9 cut(s) 375, 480, 577, 633, 678, 771, 799, 1187, 1197
Sau96I GGNCC 7 cut(s) 38, 195, 348, 392, 659, 789, 966
ScaI AGTACT 1 cut(s) 13
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 4 cut(s) 99, 346, 870, 896
SduI GDGCHC 2 cut(s) 885, 894
SfaNI GCATC 2 cut(s) 818, 1145
SfoI GGCGCC 1 cut(s) 1171
SinI GGWCC 6 cut(s) 195, 348, 392, 659, 789, 966
SmlI CTYRAG 1 cut(s) 1180
SmoI CTYRAG 1 cut(s) 1180
Sse9I AATT 6 cut(s) 28, 70, 370, 619, 628, 775
SspDI GGCGCC 1 cut(s) 1169
SspMI CTAG 2 cut(s) 759, 936
StyD4I CCNGG 4 cut(s) 97, 344, 868, 894
StyI CCWWGG 3 cut(s) 416, 667, 843
TaaI ACNGT 4 cut(s) 142, 571, 1039, 1147
TaiI ACGT 2 cut(s) 80, 114
TaqI TCGA 2 cut(s) 21, 483
TaqII GACCGA 1 cut(s) 535
TasI AATT 6 cut(s) 28, 70, 370, 619, 628, 775
TatI WGTACW 1 cut(s) 11
TauI GCSGC 1 cut(s) 1064
Tru1I TTAA 2 cut(s) 144, 1032
Tru9I TTAA 2 cut(s) 144, 1032
TscAI CASTG 2 cut(s) 250, 1152
TseFI GTSAC 2 cut(s) 241, 549
TseI GCWGC 1 cut(s) 1160
Tsp45I GTSAC 2 cut(s) 241, 549
TspDTI ATGAA 6 cut(s) 39, 480, 702, 782, 854, 1002
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 2 cut(s) 250, 1152
VpaK11BI GGWCC 6 cut(s) 195, 348, 392, 659, 789, 966
XapI RAATTY 1 cut(s) 70
XspI CTAG 2 cut(s) 759, 936
ZrmI AGTACT 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.