Prupe.4G079700_v2.0.a1

La-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
3861154 .. 3865678
4525 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G079700.2

Sequence Viewer

Length: 1131 bp
ATGGAAGGCGAAGAGGGGCCCACCGTAACCGTCGCCGCCCCCACCGACACAGCCGTCATCAGAAGCACCGACTCGCCTCCGCCGTCTCCGAAGGACGGTTCTGATGTCTCACCCGTTGGATCTCCCGATCGCGTCTCCTCCGAGATTCAACCACAGCCTTCCGACGATGACCCTGATCAATCGTCTGGGACCGGCGGTCTCTCCAATGACCTCAAACAGAAAATTATTAAGCAGGTGGAATATTATTTCAGTGATGAAAATTTGCCCTCTGATAAGCATATGTTGAGTTTGATTAAGAAGAACAAAGAAGGTTTTGTTCCTATTTCAGTTATTGCTTCTTTTAGAAAAATGAAAAAGCTCATTCGAAACAATTCACTAATAGCGGCTGCATTGAGGGAGTCTTCCCTCCTTGTTGTGAGTTCGAATGGGAAGAAGCTAAAACGGCTTCATCCTCTTCCATTACCTGAAAACAGGGATGCAAAGTGCACTGTTTTGGTAGAGAACCTACCTGAGGATCATTCAGTGGAGAACCTCAAAAGAATATTTGGTGAAGCTGGAAATATAAAAGATGTATGCATACTTGACCCCCATGCCATAGAAGCATCAACAAAAGGCAGCAAGGCTGAGAAGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGATACTGTGGAGGCTGCTGACAAAGCTGTCACAACTTTAAATAATGAGGAGGACTGGAGAAATGGCATGCGGGTGAAGCATCTTAAGCAAATGGGGAAGTATGGACAGAGAAAACAAGCCTGGAGGGGTTTTGACTCTGAGAAGAGTAGTGGTAACAGAACTTCTGATCAAACAGGAGGTGAGGAGAATCATAATGCAAGTGAGCATCATAATGATACTCGGACACCTGACGATGAGGATGGTGAGAGAGTCCCCAAGGAGAAAAATGGGCATAGAGGTCGAAATCGGGGCCAATCAGGAAGGCAAAAATACCGTGTCACCAATGGGTTTGGTCACGGAACCAGTTCGGCTAATCATGGGATTGAACCTTCAAAGCCACCACCTGGCCCGAGAATGCCTGATGGAACCAGGGGATTCACAATGGGGCGTGGTCGGACTCTGGGCGCCAACTCCAATCAGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

377

Amino Acids

41.11

Weight (kDa)

8.33

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 223
AasI GACNNNNNNGTC 2 cut(s) 53, 692
Acc36I ACCTGC 1 cut(s) 223
AccB1I GGYRCC 1 cut(s) 1109
AccB7I CCANNNNNTGG 1 cut(s) 1049
AccII CGCG 1 cut(s) 132
AciI CCGC 5 cut(s) 36, 80, 195, 383, 736
AclWI GGATC 2 cut(s) 127, 522
AcsI RAATTY 1 cut(s) 259
AcyI GRCGYC 1 cut(s) 1110
AfiI CCNNNNNNNGG 3 cut(s) 95, 511, 1049
AflII CTTAAG 1 cut(s) 749
AgsI TTSAA 3 cut(s) 149, 1031, 1038
AhdI GACNNNNNGTC 1 cut(s) 195
AjnI CCWGG 3 cut(s) 785, 1048, 1073
AluBI AGCT 5 cut(s) 358, 436, 554, 631, 692
AluI AGCT 5 cut(s) 358, 436, 554, 631, 692
Alw21I GWGCWC 1 cut(s) 488
Alw26I GTCTC 4 cut(s) 90, 112, 139, 203
Alw44I GTGCAC 1 cut(s) 484
AlwI GGATC 2 cut(s) 127, 522
Ama87I CYCGRG 1 cut(s) 1054
AoxI GGCC 3 cut(s) 17, 955, 1051
ApaI GGGCCC 1 cut(s) 21
ApaLI GTGCAC 1 cut(s) 484
ApeKI GCWGC 3 cut(s) 386, 615, 680
ApoI RAATTY 1 cut(s) 259
Asp700I GAANNNNTTC 2 cut(s) 370, 1009
AspLEI GCGC 1 cut(s) 1112
AspS9I GGNCC 5 cut(s) 17, 18, 189, 955, 1052
AsuHPI GGTGA 6 cut(s) 102, 560, 751, 857, 920, 976
AsuII TTCGAA 2 cut(s) 364, 422
AvaI CYCGRG 1 cut(s) 1054
AvaII GGWCC 1 cut(s) 189
AxyI CCTNAGG 1 cut(s) 510
BaeGI GKGCMC 2 cut(s) 21, 488
BanI GGYRCC 1 cut(s) 1109
BanII GRGCYC 1 cut(s) 21
BarI GAAGNNNNNNTAC 2 cut(s) 811, 843
BbsI GAAGAC 1 cut(s) 393
Bbv12I GWGCWC 1 cut(s) 488
BbvI GCAGC 3 cut(s) 373, 627, 667
BccI CCATC 2 cut(s) 899, 1061
BceAI ACGGC 3 cut(s) 38, 67, 458
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciT130I CCWGG 3 cut(s) 787, 1050, 1075
BclI TGATCA 3 cut(s) 175, 633, 832
BcoDI GTCTC 4 cut(s) 90, 112, 139, 203
BfaI CTAG 1 cut(s) 656
BfoI RGCGCY 1 cut(s) 1113
BfrI CTTAAG 1 cut(s) 749
BfuAI ACCTGC 1 cut(s) 223
BisI GCNGC 5 cut(s) 36, 384, 387, 616, 681
BlsI GCNGC 5 cut(s) 37, 385, 388, 617, 682
Bme1390I CCNGG 3 cut(s) 787, 1050, 1075
Bme18I GGWCC 1 cut(s) 189
BmeRI GACNNNNNGTC 1 cut(s) 195
BmeT110I CYCGRG 1 cut(s) 1054
BmgT120I GGNCC 5 cut(s) 17, 18, 189, 955, 1052
BmiI GGNNCC 7 cut(s) 18, 19, 190, 956, 1006, 1072, 1111
BmrFI CCNGG 3 cut(s) 787, 1050, 1075
BmsI GCATC 4 cut(s) 466, 611, 754, 880
BpiI GAAGAC 1 cut(s) 393
BpmI CTGGAG 2 cut(s) 742, 808
Bpu14I TTCGAA 2 cut(s) 364, 422
BsaHI GRCGYC 1 cut(s) 1110
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 2 cut(s) 921, 1074
Bsc4I CCNNNNNNNGG 3 cut(s) 95, 511, 1049
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 2 cut(s) 725, 1008
Bse21I CCTNAGG 1 cut(s) 510
BseBI CCWGG 3 cut(s) 787, 1050, 1075
BseDI CCNNGG 2 cut(s) 921, 1074
BseGI GGATG 3 cut(s) 448, 481, 910
BseLI CCNNNNNNNGG 3 cut(s) 95, 511, 1049
BseMII CTCAG 3 cut(s) 501, 615, 795
BseNI ACTGG 2 cut(s) 725, 1008
BseRI GAGGAG 3 cut(s) 127, 728, 863
BseSI GKGCMC 2 cut(s) 21, 488
BseXI GCAGC 3 cut(s) 373, 627, 667
Bsh1236I CGCG 1 cut(s) 132
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 3 cut(s) 19, 957, 1053
BshNI GGYRCC 1 cut(s) 1109
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 1 cut(s) 488
BsiHKCI CYCGRG 1 cut(s) 1054
BsiSI CCGG 1 cut(s) 192
BslFI GGGAC 2 cut(s) 202, 902
BslI CCNNNNNNNGG 3 cut(s) 95, 511, 1049
BsmAI GTCTC 4 cut(s) 90, 112, 139, 203
BsmBI CGTCTC 2 cut(s) 90, 139
BsmFI GGGAC 2 cut(s) 202, 902
BsmI GAATGC 1 cut(s) 1065
BsnI GGCC 3 cut(s) 19, 957, 1053
Bso31I GGTCTC 1 cut(s) 203
BsoBI CYCGRG 1 cut(s) 1054
Bsp119I TTCGAA 2 cut(s) 364, 422
Bsp120I GGGCCC 1 cut(s) 17
Bsp1286I GDGCHC 2 cut(s) 21, 488
Bsp143I GATC 6 cut(s) 119, 127, 175, 514, 633, 832
BspACI CCGC 5 cut(s) 36, 80, 195, 383, 736
BspANI GGCC 3 cut(s) 19, 957, 1053
BspCNI CTCAG 3 cut(s) 502, 616, 796
BspFNI CGCG 1 cut(s) 132
BspLI GGNNCC 7 cut(s) 18, 19, 190, 956, 1006, 1072, 1111
BspMI ACCTGC 1 cut(s) 223
BspPI GGATC 2 cut(s) 127, 522
BspT104I TTCGAA 2 cut(s) 364, 422
BspT107I GGYRCC 1 cut(s) 1109
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 203
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 2 cut(s) 725, 1008
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 2 cut(s) 921, 1074
BssMI GATC 6 cut(s) 119, 127, 175, 514, 633, 832
BssNI GRCGYC 1 cut(s) 1110
BssT1I CCWWGG 1 cut(s) 921
Bst2UI CCWGG 3 cut(s) 787, 1050, 1075
Bst4CI ACNGT 6 cut(s) 25, 31, 98, 490, 673, 980
Bst6I CTCTTC 3 cut(s) 6, 459, 803
BstACI GRCGYC 1 cut(s) 1110
BstAFI CTTAAG 1 cut(s) 749
BstBI TTCGAA 2 cut(s) 364, 422
BstC8I GCNNGC 2 cut(s) 651, 734
BstDEI CTNAG 3 cut(s) 510, 624, 804
BstENI CCTNNNNNAGG 1 cut(s) 509
BstF5I GGATG 3 cut(s) 448, 481, 910
BstFNI CGCG 1 cut(s) 132
BstH2I RGCGCY 1 cut(s) 1113
BstHHI GCGC 1 cut(s) 1112
BstKTI GATC 6 cut(s) 122, 130, 178, 517, 636, 835
BstMAI GTCTC 4 cut(s) 90, 112, 139, 203
BstMBI GATC 6 cut(s) 119, 127, 175, 514, 633, 832
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 5 cut(s) 442, 599, 689, 742, 751
BstNI CCWGG 3 cut(s) 787, 1050, 1075
BstNSI RCATGY 2 cut(s) 653, 736
BstSCI CCNGG 3 cut(s) 785, 1048, 1073
BstSLI GKGCMC 2 cut(s) 21, 488
BstUI CGCG 1 cut(s) 132
BstV1I GCAGC 3 cut(s) 373, 627, 667
BstV2I GAAGAC 1 cut(s) 393
BstX2I RGATCY 1 cut(s) 119
BstYI RGATCY 1 cut(s) 119
Bsu36I CCTNAGG 1 cut(s) 510
BsuRI GGCC 3 cut(s) 19, 957, 1053
BtsCI GGATG 3 cut(s) 448, 481, 910
BtsIMutI CAGTG 3 cut(s) 256, 486, 528
BveI ACCTGC 1 cut(s) 223
Cac8I GCNNGC 2 cut(s) 651, 734
CfoI GCGC 1 cut(s) 1112
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 5 cut(s) 17, 18, 189, 955, 1052
CseI GACGC 1 cut(s) 121
CviAII CATG 4 cut(s) 590, 650, 733, 1022
DdeI CTNAG 3 cut(s) 510, 624, 804
DinI GGCGCC 1 cut(s) 1111
DpnI GATC 6 cut(s) 121, 129, 177, 516, 635, 834
DpnII GATC 6 cut(s) 119, 127, 175, 514, 633, 832
DraI TTTAAA 1 cut(s) 705
DrdI GACNNNNNNGTC 2 cut(s) 53, 692
DriI GACNNNNNGTC 1 cut(s) 195
DseDI GACNNNNNNGTC 2 cut(s) 53, 692
Eam1104I CTCTTC 3 cut(s) 6, 459, 803
Eam1105I GACNNNNNGTC 1 cut(s) 195
EarI CTCTTC 3 cut(s) 6, 459, 803
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 921
Eco24I GRGCYC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 1 cut(s) 189
Eco81I CCTNAGG 1 cut(s) 510
Eco88I CYCGRG 1 cut(s) 1054
EcoNI CCTNNNNNAGG 1 cut(s) 509
EcoO109I RGGNCCY 1 cut(s) 17
EcoRII CCWGG 3 cut(s) 785, 1048, 1073
EcoT14I CCWWGG 1 cut(s) 921
EcoT22I ATGCAT 1 cut(s) 578
EcoT38I GRGCYC 1 cut(s) 21
EgeI GGCGCC 1 cut(s) 1111
EheI GGCGCC 1 cut(s) 1111
ErhI CCWWGG 1 cut(s) 921
Esp3I CGTCTC 2 cut(s) 90, 139
FaeI CATG 4 cut(s) 593, 653, 736, 1025
FaqI GGGAC 2 cut(s) 202, 902
FatI CATG 4 cut(s) 589, 649, 732, 1021
FauI CCCGC 1 cut(s) 729
FauNDI CATATG 1 cut(s) 279
FbaI TGATCA 3 cut(s) 175, 633, 832
Fnu4HI GCNGC 5 cut(s) 36, 384, 387, 616, 681
FokI GGATG 3 cut(s) 435, 488, 917
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 5 cut(s) 36, 384, 387, 616, 681
FspBI CTAG 1 cut(s) 656
GlaI GCGC 1 cut(s) 1111
GluI GCNGC 5 cut(s) 36, 384, 387, 616, 681
GsuI CTGGAG 2 cut(s) 742, 808
HaeII RGCGCY 1 cut(s) 1113
HaeIII GGCC 3 cut(s) 19, 957, 1053
HapII CCGG 1 cut(s) 192
HgaI GACGC 1 cut(s) 121
HhaI GCGC 1 cut(s) 1112
Hin1I GRCGYC 1 cut(s) 1110
Hin1II CATG 4 cut(s) 593, 653, 736, 1025
Hin6I GCGC 1 cut(s) 1110
HinP1I GCGC 1 cut(s) 1110
HinfI GANTC 8 cut(s) 71, 145, 398, 800, 853, 915, 1080, 1102
HpaII CCGG 1 cut(s) 192
HphI GGTGA 6 cut(s) 102, 560, 751, 857, 920, 976
Hpy166II GTNNAC 1 cut(s) 486
Hpy188III TCNNGA 2 cut(s) 125, 963
Hpy8I GTNNAC 1 cut(s) 486
Hpy99I CGWCG 2 cut(s) 35, 167
HpyAV CCTTC 5 cut(s) 85, 168, 302, 960, 1044
HpyCH4III ACNGT 6 cut(s) 25, 31, 98, 490, 673, 980
HpyCH4V TGCA 6 cut(s) 389, 479, 486, 576, 649, 863
HpyF10VI GCNNNNNNNGC 5 cut(s) 442, 599, 689, 742, 751
HpyF3I CTNAG 3 cut(s) 510, 624, 804
Hsp92I GRCGYC 1 cut(s) 1110
Hsp92II CATG 4 cut(s) 593, 653, 736, 1025
HspAI GCGC 1 cut(s) 1110
KasI GGCGCC 1 cut(s) 1109
Ksp22I TGATCA 3 cut(s) 175, 633, 832
Kzo9I GATC 6 cut(s) 119, 127, 175, 514, 633, 832
Lsp1109I GCAGC 3 cut(s) 373, 627, 667
LweI GCATC 4 cut(s) 466, 611, 754, 880
MaeI CTAG 1 cut(s) 656
MaeIII GTNAC 5 cut(s) 25, 694, 818, 982, 998
MalI GATC 6 cut(s) 121, 129, 177, 516, 635, 834
MboI GATC 6 cut(s) 119, 127, 175, 514, 633, 832
MboII GAAGA 6 cut(s) 23, 310, 393, 442, 446, 820
MflI RGATCY 1 cut(s) 119
MhlI GDGCHC 2 cut(s) 21, 488
MluCI AATT 3 cut(s) 222, 259, 370
Mly113I GGCGCC 1 cut(s) 1110
MlyI GAGTC 5 cut(s) 65, 407, 794, 924, 1096
MmeI TCCRAC 3 cut(s) 97, 186, 1079
Mph1103I ATGCAT 1 cut(s) 578
MroXI GAANNNNTTC 2 cut(s) 370, 1009
MseI TTAA 4 cut(s) 228, 294, 704, 750
MslI CAYNNNNRTG 2 cut(s) 737, 876
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 1 cut(s) 192
MspR9I CCNGG 3 cut(s) 787, 1050, 1075
Mva1269I GAATGC 1 cut(s) 1065
MvaI CCWGG 3 cut(s) 787, 1050, 1075
MvnI CGCG 1 cut(s) 132
MwoI GCNNNNNNNGC 5 cut(s) 442, 599, 689, 742, 751
NarI GGCGCC 1 cut(s) 1110
NdeI CATATG 1 cut(s) 279
NdeII GATC 6 cut(s) 119, 127, 175, 514, 633, 832
NlaIII CATG 4 cut(s) 593, 653, 736, 1025
NlaIV GGNNCC 7 cut(s) 18, 19, 190, 956, 1006, 1072, 1111
NmuCI GTSAC 3 cut(s) 694, 982, 998
NsiI ATGCAT 1 cut(s) 578
NspI RCATGY 2 cut(s) 653, 736
NspV TTCGAA 2 cut(s) 364, 422
PaeI GCATGC 2 cut(s) 653, 736
PaqCI CACCTGC 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PctI GAATGC 1 cut(s) 1065
PdmI GAANNNNTTC 2 cut(s) 370, 1009
PfeI GAWTC 3 cut(s) 145, 853, 1080
PflMI CCANNNNNTGG 1 cut(s) 1049
PkrI GCNGC 5 cut(s) 37, 385, 388, 617, 682
Ple19I CGATCG 1 cut(s) 130
PleI GAGTC 5 cut(s) 65, 406, 794, 923, 1096
PluTI GGCGCC 1 cut(s) 1113
PpsI GAGTC 5 cut(s) 65, 406, 794, 923, 1096
Psp6I CCWGG 3 cut(s) 785, 1048, 1073
PspGI CCWGG 3 cut(s) 785, 1048, 1073
PspN4I GGNNCC 7 cut(s) 18, 19, 190, 956, 1006, 1072, 1111
PspOMI GGGCCC 1 cut(s) 17
PspPI GGNCC 5 cut(s) 17, 18, 189, 955, 1052
PsuI RGATCY 1 cut(s) 119
PvuI CGATCG 1 cut(s) 130
RseI CAYNNNNRTG 2 cut(s) 737, 876
SaqAI TTAA 4 cut(s) 228, 294, 704, 750
SatI GCNGC 5 cut(s) 36, 384, 387, 616, 681
Sau3AI GATC 6 cut(s) 119, 127, 175, 514, 633, 832
Sau96I GGNCC 5 cut(s) 17, 18, 189, 955, 1052
SchI GAGTC 5 cut(s) 65, 407, 794, 924, 1096
ScrFI CCNGG 3 cut(s) 787, 1050, 1075
SduI GDGCHC 2 cut(s) 21, 488
SfaNI GCATC 4 cut(s) 466, 611, 754, 880
SfoI GGCGCC 1 cut(s) 1111
SfuI TTCGAA 2 cut(s) 364, 422
SinI GGWCC 1 cut(s) 189
SmiMI CAYNNNNRTG 2 cut(s) 737, 876
SmlI CTYRAG 1 cut(s) 749
SmoI CTYRAG 1 cut(s) 749
SphI GCATGC 2 cut(s) 653, 736
Sse9I AATT 3 cut(s) 222, 259, 370
SsiI CCGC 5 cut(s) 36, 80, 195, 383, 736
SspDI GGCGCC 1 cut(s) 1109
SspI AATATT 2 cut(s) 242, 543
SspMI CTAG 1 cut(s) 656
StyD4I CCNGG 3 cut(s) 785, 1048, 1073
StyI CCWWGG 1 cut(s) 921
TaaI ACNGT 6 cut(s) 25, 31, 98, 490, 673, 980
TaqI TCGA 3 cut(s) 364, 422, 946
TasI AATT 3 cut(s) 222, 259, 370
TauI GCSGC 2 cut(s) 38, 386
TfiI GAWTC 3 cut(s) 145, 853, 1080
Tru1I TTAA 4 cut(s) 228, 294, 704, 750
Tru9I TTAA 4 cut(s) 228, 294, 704, 750
TscAI CASTG 3 cut(s) 256, 493, 528
TseFI GTSAC 3 cut(s) 694, 982, 998
TseI GCWGC 3 cut(s) 386, 615, 680
Tsp45I GTSAC 3 cut(s) 694, 982, 998
TspDTI ATGAA 3 cut(s) 270, 365, 437
TspGWI ACGGA 1 cut(s) 1017
TspRI CASTG 3 cut(s) 256, 493, 528
Van91I CCANNNNNTGG 1 cut(s) 1049
Vha464I CTTAAG 1 cut(s) 749
VneI GTGCAC 1 cut(s) 484
VpaK11BI GGWCC 1 cut(s) 189
XagI CCTNNNNNAGG 1 cut(s) 509
XapI RAATTY 1 cut(s) 259
XceI RCATGY 2 cut(s) 653, 736
XmnI GAANNNNTTC 2 cut(s) 370, 1009
XspI CTAG 1 cut(s) 656
Zsp2I ATGCAT 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.