Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008795

Physical Location & Seq

Genomic Coordinates Forward (+)

897834 .. 901206

Gene Structure 3373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0013600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGTTCTCGAATCCCATCTCACCAGCTCAGCAACGGGCTGGTGGTGTCGGGTCCACCCGAGCAGTTCAAGGAGCGGCCGACAATGGGCTCACGCGCCATGCCTTACACCGGCGGTGACGTCAAGAAATCCGGGGAGCTCGGGAAAATGTTCGACATCCAAATCAGGGACCACCCACCTCCGTTGAAGCCCTCCCGTCATTCCTCTTCCTCGCAGCACAACAGCGGATCGGTCCGATCAGGACCCAATTCGGGTCAGATATCCAAGAAATCGTCCGGGCCCATGACGCCGCAGCTTCAGCCTACTGGGCTCATCACCTCCGGCCAATTGGGCTCGGGCCCGCTCCCCAGCGGGCCCAGGAGGTCGTCGGGACAGCTGGAGCAGACGGCGTCCATGAACAACAAGAAGGTGGTGTACGGGTCGGCGGTGACGGCGCTGAGCGATGACGTCAAGGTGAATTTTCGGGTTTCGAAGGCGGTGGTGTGGGTGTTCATGGTGGTGGTGGCGATGGGTTTGCTGGTGGGAGGGTTTCTGATGGTGGCGGTGAAGAAGTGGGTGATATTGGTGGCGGTGGCGCTGGTTTTGGTGCCGGTGGGGGTGGTGATTGTCTGGAATTACGTGTGGGGGAAGCGAGGGTTGCTAGGTTTTGTGAGGAGTTACCCTGATGCTGAGCTCAGAGGAGCCATAGATGGGCAGTTCGTCAAGGTTACTGGGGTTGTTACCTGTGGCAGCATTCCTTTGGAATCATCCTACCAAAGGGTACCTAGGTGTGTATATGTTTCCACAGAATTATGTGAAACTCAAGGATGCGGTAGCAAGTCCACAAATAAAAAATCTAATCATTCAGAGAAATATGTGGCTGATTTCTACATATCGGACTTCCAATCTGGGCTAAGAGCATTAGTGAAGGCGGGATATGGGGCCAAGGTTGCGCCATTTGTTAAACCAGCCACTATCGTGGATGTGACTAAAGAAAACAGAGACCTATCTCCTAGTTTTTTACGCTGGCTCGCTGAGCGCAACCTCTCTAGTGATGACCGTATAATGCGCCTTAAAGAAGGGTATATTAAAGAAGGAAGTACTGTAAGTGTGATGGGGGTTGTCCGACGCCATGACAATGTTGTCATGATTGTTCCTCCAGTGCAGCCTGTCTCGACAGGCTTTCAATGGTTACGCTGCCTTCTCCCAACGTATGTTGAAGGTCTCGTTCTGACATGTGATGATACTCAGGATGCTGATGTGGTTCCTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF642

Protein Analysis

417

Amino Acids

45.1

Weight (kDa)

9.59

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46250 AT5G46250 AT5G46250
fragaria_vesca	FvH4_3g05700 FvH4_3g05700 FvH4_3g05711
malus_domestica	MD05G1284700.v1.1 MD10G1263100.v1.1
prunus_persica	Prupe.1G274200_v2.0.a1 Prupe.4G079700_v2.0.a1 Prupe.4G079700_v2.0.a1
pyrus_communis	pycom05g26400 pycom10g21930
rosa_chinensis	RchiOBHm_Chr5g0013961
rosa_laevigata	RLG00000032055
rosa_multiflora	Rmu_sc0005803.1_g000018
rosa_roxburghii	Rroxscaffold_1G00062760
rosa_rugosa	Rorug05G0013600
rosa_samantha	Rh5AG107800 Rh5BG104500 Rh5CG116400 Rh5DG103100
rosa_wichuraiana	Rw5G009420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1121
AatII	GACGTC	2 cut(s)	123, 450
Acc65I	GGTACC	1 cut(s)	760
AccB1I	GGYRCC	2 cut(s)	586, 760
AccBSI	CCGCTC	2 cut(s)	76, 343
AccII	CGCG	1 cut(s)	96
AclWI	GGATC	1 cut(s)	235
AcoI	YGGCCR	2 cut(s)	77, 322
AcsI	RAATTY	1 cut(s)	457
AcuI	CTGAAG	1 cut(s)	281
AcyI	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
AfaI	GTAC	3 cut(s)	416, 762, 1081
AfiI	CCNNNNNNNGG	6 cut(s)	86, 110, 166, 251, 690, 756
AflIII	ACRYGT	2 cut(s)	618, 1214
AgsI	TTSAA	4 cut(s)	70, 187, 1166, 1199
AjnI	CCWGG	1 cut(s)	356
AleI	CACNNNNGTG	1 cut(s)	956
AluBI	AGCT	5 cut(s)	28, 139, 295, 376, 673
AluI	AGCT	5 cut(s)	28, 139, 295, 376, 673
Alw21I	GWGCWC	2 cut(s)	141, 675
Alw26I	GTCTC	3 cut(s)	975, 1156, 1208
AlwI	GGATC	1 cut(s)	235
Ama87I	CYCGRG	3 cut(s)	59, 140, 334
AoxI	GGCC	6 cut(s)	77, 278, 322, 337, 353, 921
ApaI	GGGCCC	3 cut(s)	282, 341, 357
ApeKI	GCWGC	5 cut(s)	214, 292, 729, 1144, 1176
ApoI	RAATTY	1 cut(s)	457
Asp700I	GAANNNNTTC	1 cut(s)	149
Asp718I	GGTACC	1 cut(s)	760
AspA2I	CCTAGG	1 cut(s)	764
AspLEI	GCGC	6 cut(s)	98, 436, 577, 934, 1020, 1050
AsuC2I	CCSGG	2 cut(s)	133, 277
AsuHPI	GGTGA	8 cut(s)	14, 128, 307, 439, 466, 556, 568, 613
AsuII	TTCGAA	1 cut(s)	470
AvaI	CYCGRG	3 cut(s)	59, 140, 334
AvaII	GGWCC	4 cut(s)	53, 169, 232, 242
AvrII	CCTAGG	1 cut(s)	764
BaeGI	GKGCMC	3 cut(s)	282, 341, 357
BaeI	ACNNNNGTAYC	2 cut(s)	752, 785
BanI	GGYRCC	2 cut(s)	586, 760
BanII	GRGCYC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
BarI	GAAGNNNNNNTAC	2 cut(s)	398, 430
Bbv12I	GWGCWC	2 cut(s)	141, 675
BbvI	GCAGC	5 cut(s)	226, 304, 741, 1156, 1163
BccI	CCATC	5 cut(s)	25, 502, 529, 683, 1087
BceAI	ACGGC	2 cut(s)	402, 447
BcgI	CGANNNNNNTGC	2 cut(s)	496, 530
BciT130I	CCWGG	1 cut(s)	358
BcnI	CCSGG	2 cut(s)	133, 277
BcoDI	GTCTC	3 cut(s)	975, 1156, 1208
BfaI	CTAG	4 cut(s)	641, 765, 993, 1029
BfoI	RGCGCY	2 cut(s)	437, 578
BglI	GCCNNNNNGGC	2 cut(s)	307, 330
BisI	GCNGC	7 cut(s)	77, 215, 290, 293, 730, 1145, 1177
BlnI	CCTAGG	1 cut(s)	764
BlpI	GCTNAGC	4 cut(s)	29, 437, 669, 1014
BlsI	GCNGC	7 cut(s)	78, 216, 291, 294, 731, 1146, 1178
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	3 cut(s)	133, 277, 358
Bme18I	GGWCC	4 cut(s)	53, 169, 232, 242
BmeT110I	CYCGRG	3 cut(s)	59, 140, 334
BmrFI	CCNGG	3 cut(s)	133, 277, 358
BmrI	ACTGGG	2 cut(s)	315, 720
BmsI	GCATC	3 cut(s)	655, 797, 1222
BmuI	ACTGGG	2 cut(s)	315, 720
BpmI	CTGGAG	2 cut(s)	398, 1122
Bpu1102I	GCTNAGC	4 cut(s)	29, 437, 669, 1014
Bpu14I	TTCGAA	1 cut(s)	470
BpuEI	CTTGAG	1 cut(s)	786
BpuMI	CCSGG	2 cut(s)	133, 277
BsaAI	YACGTR	1 cut(s)	619
BsaHI	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
BsaI	GGTCTC	2 cut(s)	975, 1208
BsaJI	CCNNGG	4 cut(s)	132, 356, 764, 924
Bsc4I	CCNNNNNNNGG	6 cut(s)	86, 110, 166, 251, 690, 756
Bse118I	RCCGGY	2 cut(s)	110, 589
Bse1I	ACTGG	3 cut(s)	310, 715, 1139
BseBI	CCWGG	1 cut(s)	358
BseDI	CCNNGG	4 cut(s)	132, 356, 764, 924
BseGI	GGATG	5 cut(s)	156, 746, 812, 967, 1237
BseLI	CCNNNNNNNGG	6 cut(s)	86, 110, 166, 251, 690, 756
BseMII	CTCAG	6 cut(s)	43, 428, 660, 688, 1005, 1241
BseNI	ACTGG	3 cut(s)	310, 715, 1139
BseRI	GAGGAG	2 cut(s)	667, 693
BseSI	GKGCMC	3 cut(s)	282, 341, 357
BseX3I	CGGCCG	1 cut(s)	77
BseXI	GCAGC	5 cut(s)	226, 304, 741, 1156, 1163
BseYI	CCCAGC	1 cut(s)	347
BsgI	GTGCAG	1 cut(s)	1163
Bsh1236I	CGCG	1 cut(s)	96
Bsh1285I	CGRYCG	1 cut(s)	80
BshFI	GGCC	6 cut(s)	79, 280, 324, 339, 355, 923
BshNI	GGYRCC	2 cut(s)	586, 760
BsiEI	CGRYCG	1 cut(s)	80
BsiHKAI	GWGCWC	2 cut(s)	141, 675
BsiHKCI	CYCGRG	3 cut(s)	59, 140, 334
BsiSI	CCGG	5 cut(s)	111, 132, 276, 321, 590
BslFI	GGGAC	2 cut(s)	182, 384
BslI	CCNNNNNNNGG	6 cut(s)	86, 110, 166, 251, 690, 756
BsmAI	GTCTC	3 cut(s)	975, 1156, 1208
BsmFI	GGGAC	2 cut(s)	182, 384
BsmI	GAATGC	1 cut(s)	732
BsnI	GGCC	6 cut(s)	79, 280, 324, 339, 355, 923
Bso31I	GGTCTC	2 cut(s)	975, 1208
BsoBI	CYCGRG	3 cut(s)	59, 140, 334
Bsp119I	TTCGAA	1 cut(s)	470
Bsp120I	GGGCCC	3 cut(s)	278, 337, 353
Bsp1286I	GDGCHC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
Bsp143I	GATC	2 cut(s)	227, 236
Bsp1720I	GCTNAGC	4 cut(s)	29, 437, 669, 1014
BspANI	GGCC	6 cut(s)	79, 280, 324, 339, 355, 923
BspCNI	CTCAG	6 cut(s)	42, 429, 661, 687, 1006, 1240
BspFNI	CGCG	1 cut(s)	96
BspHI	TCATGA	1 cut(s)	1125
BspPI	GGATC	1 cut(s)	235
BspT104I	TTCGAA	1 cut(s)	470
BspT107I	GGYRCC	2 cut(s)	586, 760
BspTNI	GGTCTC	2 cut(s)	975, 1208
BsrBI	CCGCTC	2 cut(s)	76, 343
BsrFI	RCCGGY	2 cut(s)	110, 589
BsrI	ACTGG	3 cut(s)	310, 715, 1139
BssAI	RCCGGY	2 cut(s)	110, 589
BssECI	CCNNGG	4 cut(s)	132, 356, 764, 924
BssMI	GATC	2 cut(s)	227, 236
BssNI	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
BssT1I	CCWWGG	2 cut(s)	764, 924
Bst2UI	CCWGG	1 cut(s)	358
Bst4CI	ACNGT	2 cut(s)	1040, 1084
Bst6I	CTCTTC	1 cut(s)	211
BstACI	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
BstBAI	YACGTR	1 cut(s)	619
BstBI	TTCGAA	1 cut(s)	470
BstC8I	GCNNGC	4 cut(s)	341, 353, 1007, 1011
BstDEI	CTNAG	7 cut(s)	29, 437, 669, 674, 893, 1014, 1227
BstENI	CCTNNNNNAGG	1 cut(s)	754
BstF5I	GGATG	5 cut(s)	156, 746, 812, 967, 1237
BstFNI	CGCG	1 cut(s)	96
BstH2I	RGCGCY	2 cut(s)	437, 578
BstHHI	GCGC	6 cut(s)	98, 436, 577, 934, 1020, 1050
BstKTI	GATC	2 cut(s)	230, 239
BstMAI	GTCTC	3 cut(s)	975, 1156, 1208
BstMBI	GATC	2 cut(s)	227, 236
BstMCI	CGRYCG	1 cut(s)	80
BstMWI	GCNNNNNNNGC	8 cut(s)	286, 298, 307, 330, 431, 637, 929, 1015
BstNI	CCWGG	1 cut(s)	358
BstNSI	RCATGY	1 cut(s)	1218
BstSCI	CCNGG	3 cut(s)	131, 275, 356
BstSLI	GKGCMC	3 cut(s)	282, 341, 357
BstUI	CGCG	1 cut(s)	96
BstV1I	GCAGC	5 cut(s)	226, 304, 741, 1156, 1163
BstXI	CCANNNNNNTGG	1 cut(s)	958
BstZI	CGGCCG	1 cut(s)	77
BsuRI	GGCC	6 cut(s)	79, 280, 324, 339, 355, 923
BtgZI	GCGATG	2 cut(s)	456, 521
BtsCI	GGATG	5 cut(s)	156, 746, 812, 967, 1237
BtsIMutI	CAGTG	1 cut(s)	1146
Cac8I	GCNNGC	4 cut(s)	341, 353, 1007, 1011
CciI	TCATGA	1 cut(s)	1125
CfoI	GCGC	6 cut(s)	98, 436, 577, 934, 1020, 1050
Cfr10I	RCCGGY	2 cut(s)	110, 589
CpoI	CGGWCCG	1 cut(s)	232
CseI	GACGC	3 cut(s)	295, 378, 1116
Csp6I	GTAC	3 cut(s)	415, 761, 1080
CspCI	CAANNNNNGTGG	2 cut(s)	165, 200
CspI	CGGWCCG	1 cut(s)	232
CviAII	CATG	7 cut(s)	100, 283, 394, 493, 1112, 1126, 1215
CviQI	GTAC	3 cut(s)	415, 761, 1080
DdeI	CTNAG	7 cut(s)	29, 437, 669, 674, 893, 1014, 1227
DpnI	GATC	2 cut(s)	229, 238
DpnII	GATC	2 cut(s)	227, 236
DrdI	GACNNNNNNGTC	1 cut(s)	1121
DseDI	GACNNNNNNGTC	1 cut(s)	1121
EaeI	YGGCCR	2 cut(s)	77, 322
EagI	CGGCCG	1 cut(s)	77
Eam1104I	CTCTTC	1 cut(s)	211
EarI	CTCTTC	1 cut(s)	211
Ecl136II	GAGCTC	2 cut(s)	139, 673
EclXI	CGGCCG	1 cut(s)	77
Eco130I	CCWWGG	2 cut(s)	764, 924
Eco24I	GRGCYC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
Eco31I	GGTCTC	2 cut(s)	975, 1208
Eco32I	GATATC	1 cut(s)	261
Eco47I	GGWCC	4 cut(s)	53, 169, 232, 242
Eco52I	CGGCCG	1 cut(s)	77
Eco53kI	GAGCTC	2 cut(s)	139, 673
Eco57I	CTGAAG	1 cut(s)	281
Eco88I	CYCGRG	3 cut(s)	59, 140, 334
EcoICRI	GAGCTC	2 cut(s)	139, 673
EcoNI	CCTNNNNNAGG	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	242
EcoRII	CCWGG	1 cut(s)	356
EcoRV	GATATC	1 cut(s)	261
EcoT14I	CCWWGG	2 cut(s)	764, 924
EcoT38I	GRGCYC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
ErhI	CCWWGG	2 cut(s)	764, 924
FaeI	CATG	7 cut(s)	103, 286, 397, 496, 1115, 1129, 1218
FaqI	GGGAC	2 cut(s)	182, 384
FatI	CATG	7 cut(s)	99, 282, 393, 492, 1111, 1125, 1214
FauI	CCCGC	3 cut(s)	344, 348, 904
Fnu4HI	GCNGC	7 cut(s)	77, 215, 290, 293, 730, 1145, 1177
FokI	GGATG	5 cut(s)	143, 733, 819, 974, 1244
FriOI	GRGCYC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
Fsp4HI	GCNGC	7 cut(s)	77, 215, 290, 293, 730, 1145, 1177
FspBI	CTAG	4 cut(s)	641, 765, 993, 1029
GlaI	GCGC	6 cut(s)	97, 435, 576, 933, 1019, 1049
GluI	GCNGC	7 cut(s)	77, 215, 290, 293, 730, 1145, 1177
GsaI	CCCAGC	1 cut(s)	351
GsuI	CTGGAG	2 cut(s)	398, 1122
HaeII	RGCGCY	2 cut(s)	437, 578
HaeIII	GGCC	6 cut(s)	79, 280, 324, 339, 355, 923
HapII	CCGG	5 cut(s)	111, 132, 276, 321, 590
HgaI	GACGC	3 cut(s)	295, 378, 1116
HhaI	GCGC	6 cut(s)	98, 436, 577, 934, 1020, 1050
Hin1I	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
Hin1II	CATG	7 cut(s)	103, 286, 397, 496, 1115, 1129, 1218
Hin6I	GCGC	6 cut(s)	96, 434, 575, 932, 1018, 1048
HinP1I	GCGC	6 cut(s)	96, 434, 575, 932, 1018, 1048
HinfI	GANTC	2 cut(s)	12, 743
HpaII	CCGG	5 cut(s)	111, 132, 276, 321, 590
HphI	GGTGA	8 cut(s)	14, 128, 307, 439, 466, 556, 568, 613
Hpy166II	GTNNAC	3 cut(s)	56, 415, 822
Hpy188I	TCNGA	8 cut(s)	236, 258, 534, 677, 847, 877, 1106, 1212
Hpy188III	TCNNGA	9 cut(s)	9, 124, 142, 240, 369, 610, 1126, 1153, 1229
Hpy8I	GTNNAC	3 cut(s)	56, 415, 822
Hpy99I	CGWCG	2 cut(s)	370, 1110
HpyAV	CCTTC	7 cut(s)	400, 466, 901, 1052, 1067, 1190, 1193
HpyCH4III	ACNGT	2 cut(s)	1040, 1084
HpyCH4IV	ACGT	4 cut(s)	120, 447, 618, 1190
HpyCH4V	TGCA	1 cut(s)	1144
HpyF10VI	GCNNNNNNNGC	8 cut(s)	286, 298, 307, 330, 431, 637, 929, 1015
HpyF3I	CTNAG	7 cut(s)	29, 437, 669, 674, 893, 1014, 1227
HpySE526I	ACGT	4 cut(s)	120, 447, 618, 1190
Hsp92I	GRCGYC	5 cut(s)	120, 287, 389, 447, 1108
Hsp92II	CATG	7 cut(s)	103, 286, 397, 496, 1115, 1129, 1218
HspAI	GCGC	6 cut(s)	96, 434, 575, 932, 1018, 1048
KpnI	GGTACC	1 cut(s)	764
Kzo9I	GATC	2 cut(s)	227, 236
LmnI	GCTCC	5 cut(s)	73, 136, 348, 379, 680
Lsp1109I	GCAGC	5 cut(s)	226, 304, 741, 1156, 1163
LweI	GCATC	3 cut(s)	655, 797, 1222
MaeI	CTAG	4 cut(s)	641, 765, 993, 1029
MaeII	ACGT	4 cut(s)	120, 447, 618, 1190
MaeIII	GTNAC	7 cut(s)	116, 427, 656, 706, 718, 964, 1170
MalI	GATC	2 cut(s)	229, 238
MbiI	CCGCTC	2 cut(s)	76, 343
MboI	GATC	2 cut(s)	227, 236
MboII	GAAGA	2 cut(s)	198, 559
MfeI	CAATTG	1 cut(s)	326
MhlI	GDGCHC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
MluCI	AATT	5 cut(s)	247, 326, 457, 613, 788
MmeI	TCCRAC	1 cut(s)	1129
MroXI	GAANNNNTTC	1 cut(s)	149
MseI	TTAA	3 cut(s)	942, 1053, 1068
MslI	CAYNNNNRTG	3 cut(s)	497, 956, 1116
MspA1I	CMGCKG	3 cut(s)	225, 351, 376
MspI	CCGG	5 cut(s)	111, 132, 276, 321, 590
MspR9I	CCNGG	3 cut(s)	133, 277, 358
MunI	CAATTG	1 cut(s)	326
Mva1269I	GAATGC	1 cut(s)	732
MvaI	CCWGG	1 cut(s)	358
MvnI	CGCG	1 cut(s)	96
MwoI	GCNNNNNNNGC	8 cut(s)	286, 298, 307, 330, 431, 637, 929, 1015
NciI	CCSGG	2 cut(s)	133, 277
NdeII	GATC	2 cut(s)	227, 236
NlaIII	CATG	7 cut(s)	103, 286, 397, 496, 1115, 1129, 1218
NmuCI	GTSAC	3 cut(s)	116, 427, 964
NspI	RCATGY	1 cut(s)	1218
NspV	TTCGAA	1 cut(s)	470
OliI	CACNNNNGTG	1 cut(s)	956
PagI	TCATGA	1 cut(s)	1125
PciI	ACATGT	1 cut(s)	1214
PctI	GAATGC	1 cut(s)	732
PdmI	GAANNNNTTC	1 cut(s)	149
PfeI	GAWTC	2 cut(s)	12, 743
PflFI	GACNNNGTC	1 cut(s)	388
PkrI	GCNGC	7 cut(s)	78, 216, 291, 294, 731, 1146, 1178
Ppu21I	YACGTR	1 cut(s)	619
PpuMI	RGGWCCY	1 cut(s)	242
PscI	ACATGT	1 cut(s)	1214
Psp124BI	GAGCTC	2 cut(s)	141, 675
Psp5II	RGGWCCY	1 cut(s)	242
Psp6I	CCWGG	1 cut(s)	356
PspFI	CCCAGC	1 cut(s)	347
PspGI	CCWGG	1 cut(s)	356
PspOMI	GGGCCC	3 cut(s)	278, 337, 353
PspPPI	RGGWCCY	1 cut(s)	242
PsyI	GACNNNGTC	1 cut(s)	388
PvuII	CAGCTG	1 cut(s)	376
RsaI	GTAC	3 cut(s)	416, 762, 1081
RsaNI	GTAC	3 cut(s)	415, 761, 1080
RseI	CAYNNNNRTG	3 cut(s)	497, 956, 1116
Rsr2I	CGGWCCG	1 cut(s)	232
RsrII	CGGWCCG	1 cut(s)	232
SacI	GAGCTC	2 cut(s)	141, 675
SaqAI	TTAA	3 cut(s)	942, 1053, 1068
SatI	GCNGC	7 cut(s)	77, 215, 290, 293, 730, 1145, 1177
Sau3AI	GATC	2 cut(s)	227, 236
ScaI	AGTACT	1 cut(s)	1081
ScrFI	CCNGG	3 cut(s)	133, 277, 358
SduI	GDGCHC	8 cut(s)	92, 141, 282, 312, 335, 341, 357, 675
SfaNI	GCATC	3 cut(s)	655, 797, 1222
SfuI	TTCGAA	1 cut(s)	470
SgrAI	CRCCGGYG	1 cut(s)	110
SinI	GGWCC	4 cut(s)	53, 169, 232, 242
SmiMI	CAYNNNNRTG	3 cut(s)	497, 956, 1116
SmlI	CTYRAG	1 cut(s)	801
SmoI	CTYRAG	1 cut(s)	801
Sse9I	AATT	5 cut(s)	247, 326, 457, 613, 788
SspMI	CTAG	4 cut(s)	641, 765, 993, 1029
SstI	GAGCTC	2 cut(s)	141, 675
StyD4I	CCNGG	3 cut(s)	131, 275, 356
StyI	CCWWGG	2 cut(s)	764, 924
TaaI	ACNGT	2 cut(s)	1040, 1084
TaiI	ACGT	4 cut(s)	123, 450, 621, 1193
TaqI	TCGA	4 cut(s)	10, 153, 470, 1154
TaqII	GACCGA	1 cut(s)	220
TasI	AATT	5 cut(s)	247, 326, 457, 613, 788
TatI	WGTACW	1 cut(s)	1079
TauI	GCSGC	2 cut(s)	79, 292
TfiI	GAWTC	2 cut(s)	12, 743
Tru1I	TTAA	3 cut(s)	942, 1053, 1068
Tru9I	TTAA	3 cut(s)	942, 1053, 1068
TscAI	CASTG	1 cut(s)	1146
TseFI	GTSAC	3 cut(s)	116, 427, 964
TseI	GCWGC	5 cut(s)	214, 292, 729, 1144, 1176
Tsp45I	GTSAC	3 cut(s)	116, 427, 964
TspDTI	ATGAA	2 cut(s)	410, 481
TspGWI	ACGGA	1 cut(s)	171
TspRI	CASTG	1 cut(s)	1146
Tth111I	GACNNNGTC	1 cut(s)	388
VpaK11BI	GGWCC	4 cut(s)	53, 169, 232, 242
XagI	CCTNNNNNAGG	1 cut(s)	754
XapI	RAATTY	1 cut(s)	457
XceI	RCATGY	1 cut(s)	1218
XmaJI	CCTAGG	1 cut(s)	764
XmnI	GAANNNNTTC	1 cut(s)	149
XspI	CTAG	4 cut(s)	641, 765, 993, 1029
ZraI	GACGTC	2 cut(s)	121, 448
ZrmI	AGTACT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.