Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005803.1

Orthogroup ID

OG0008795

Physical Location & Seq

Genomic Coordinates Forward (+)

89139 .. 99077

Gene Structure 9939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005803.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

atgggtcggagctccgcaacacccaaatgggtcttaccgttcatgcttgttcttggttctctggcttttcaaatctcagctttagatggaccactaccaaatggagactttgaggcaactccaacaggcggtttctccagtgacgctatagtagacgggcccacagggatccccagctggaaatcaaacggcaccgttgaggtagtcgaggccgggcaaaaacagggtgggatgctcctcatcgtaccgcaaggtagacacgcagtccggctcggaaacgacgccgaagtgagccaggacatcaaggtggagaaggggtcgatctactccgtcacgttcagcgcggctcgcacttgcgcgcagctggagtcgctgaacgtgtcggtgctgcccgcgtcgcagacgatagacctgcagacattgtacagcgtgcagggctgggacccgtacgcgtgggcttttgaggccgaagaggatgatgtgaagctggtgttcaggaacccagggatggaggacgaccctacttgtgggcccatcattgatgacgttgctatcaagaagctctttacccctgataagcccaaaaacaatgcagtggttaatggtgattttgaggaaggtccatggatgcttgcaaacgtctctttaggagtgctccttcctacaaacctcgacgaagaaacatcgtccttaccgggttggaatgttgaatccaatcgggctgttcgttacattgactcctaccacttcagtgtgccacagggcaagagagcgatagaattgctttctgggaaggaaggcatcatttcccaaatggttgaaactaaaccgaacaagccatataccctcaccttctctttaggccatgccaatgacaaatgcaagcagcctcttgctgtcatggcctttgccggcgaccaagcccaaaatgtccattacacccctaattccaacagcacattccaaagtgccaatgtgaatttcactgccaaagctgagaggtcaaggattgcattctacagtgtgtactataacacaaggactgatgatatgagctcactgtgtggacctgtggttgatgatgttagggtttggttttcagggtcaaggagaaatgggcttggagggttgggcctaaggcttggggtggctttgtggagactagcacgtctacttggccaagctcaccgaacaggcggagcgctacgaggagatgggtccaccacggcgtcagagctcaccgtcgaggagcgcatcgagcagaaggaggagggccgcaagaacgaggaggacgtggcgctcgtcaaggagtacagatccaaggtcgaggccgagctctctgaggggcccgccgacgcagccatcgtcgccgtcgccgtcaccaccgccgactccactgcaccgtctccgcccaacgactccgatgtctcgcccgttggatcccccgatcagggcgcgtcctccgagattctacggttgccgtccgacgacgaccccgatcaatcggccggcggtgctctcaccgaggatcttaaacaaaagattatcaagcaggtggaatattactttagtgatgaaaatttgcctaatgacaaatacatgttgagtttgattaaaaagaacaaagaaggttttgttcctatttcggttattgcgtccttcagaaaaatgaaaaagcttattcaaaacaactcgttaatagtggctgctttgaaggactcttccctccttgttgtgagttcgaatgggaagaaggtgaaacgacttcatcctctaccattacctgaaacaagggatccaaagttcactgttttggtagagaatctaccaactaatcattcagtggagaaccttaagaaaatgtttagcgaagctggaaatataaaggatatatgcatacttgacccaagtgccatagaggcatctgcaaaaggcggcaaggttgagaagccaatcagtaataagttgcatgctcttgtagagtatgataccgtggaggctactgagaaagctgttgctattttaaacaatgaggaagattggagaaatggcatgcgggtgaagcttcttaagcagatgggtaagtacgggcagagtggacagagaagacaatcccgcaggggctttgattcggagaagagtagcagtagtcgaacgtctgaaacagggatcgaggacactcataatgcaaacgaacatcacaatggtacacctgacgaagaggatggaggagaccatgggcccaaggagaaaactgggcacaggggtcgaagtcgagggcaatctggtaggcagaagtatcgtggcctcaatggttttggccacggaactacttcatctagtcatccaattgaaccttcaaagccaccacctggccctagaatgcctgatggaactaggggattcacaatgggacgaggccggactccagtgccgaatcagagttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF642

Protein Analysis

815

Amino Acids

88.47

Weight (kDa)

5.88

Isoelectric Point (pI)

45.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46250 AT5G46250 AT5G46250
fragaria_vesca	FvH4_3g05700 FvH4_3g05700 FvH4_3g05711
malus_domestica	MD05G1284700.v1.1 MD10G1263100.v1.1
prunus_persica	Prupe.1G274200_v2.0.a1 Prupe.4G079700_v2.0.a1 Prupe.4G079700_v2.0.a1
pyrus_communis	pycom05g26400 pycom10g21930
rosa_chinensis	RchiOBHm_Chr5g0013961
rosa_laevigata	RLG00000032055
rosa_multiflora	Rmu_sc0005803.1_g000018
rosa_roxburghii	Rroxscaffold_1G00062760
rosa_rugosa	Rorug05G0013600
rosa_samantha	Rh5AG107800 Rh5BG104500 Rh5CG116400 Rh5DG103100
rosa_wichuraiana	Rw5G009420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1543
AasI	GACNNNNNNGTC	2 cut(s)	1167, 1424
Acc36I	ACCTGC	2 cut(s)	420, 1543
AccB1I	GGYRCC	1 cut(s)	191
AccB7I	CCANNNNNTGG	1 cut(s)	2372
AccI	GTMKAC	3 cut(s)	153, 256, 1171
AccII	CGCG	5 cut(s)	344, 359, 395, 452, 1457
AclWI	GGATC	9 cut(s)	163, 176, 1311, 1434, 1447, 1536, 1790, 1803, 2177
AcoI	YGGCCR	3 cut(s)	1177, 1506, 2320
AcsI	RAATTY	2 cut(s)	979, 1579
AcuI	CTGAAG	2 cut(s)	733, 1645
AcyI	GRCGYC	2 cut(s)	282, 1229
AdeI	CACNNNGTG	1 cut(s)	1064
AfaI	GTAC	7 cut(s)	246, 425, 449, 1028, 1313, 2087, 2209
AfeI	AGCGCT	1 cut(s)	1203
AfiI	CCNNNNNNNGG	6 cut(s)	128, 508, 527, 1450, 1451, 2372
AflII	CTTAAG	2 cut(s)	1853, 2069
AflIII	ACRYGT	3 cut(s)	378, 450, 1599
AgsI	TTSAA	7 cut(s)	71, 710, 821, 1685, 1714, 2354, 2361
AhdI	GACNNNNNGTC	1 cut(s)	263
AjiI	CACGTC	2 cut(s)	1169, 1294
AjnI	CCWGG	3 cut(s)	294, 502, 2371
AjuI	GAANNNNNNNTTGG	8 cut(s)	944, 965, 976, 997, 1822, 1854, 2341, 2373
AleI	CACNNNNGTG	1 cut(s)	750
AloI	GAACNNNNNNTCC	2 cut(s)	1787, 1819
Alw21I	GWGCWC	6 cut(s)	14, 657, 1058, 1239, 1338, 1519
Alw26I	GTCTC	6 cut(s)	99, 646, 1153, 1410, 1432, 2226
AlwI	GGATC	9 cut(s)	163, 176, 1311, 1434, 1447, 1536, 1790, 1803, 2177
Aor51HI	AGCGCT	1 cut(s)	1203
ApaI	GGGCCC	4 cut(s)	162, 534, 1350, 2244
ApeKI	GCWGC	5 cut(s)	361, 388, 886, 1358, 1706
ApoI	RAATTY	2 cut(s)	979, 1579
Asp700I	GAANNNNTTC	1 cut(s)	2332
AspLEI	GCGC	7 cut(s)	344, 359, 361, 1204, 1254, 1300, 1457
AsuC2I	CCSGG	2 cut(s)	214, 696
AsuHPI	GGTGA	8 cut(s)	617, 841, 1178, 1231, 1372, 1513, 1768, 2071
AsuII	TTCGAA	1 cut(s)	1742
AvaII	GGWCC	5 cut(s)	89, 442, 620, 1067, 1218
AxyI	CCTNAGG	1 cut(s)	1136
BaeGI	GKGCMC	5 cut(s)	162, 534, 1350, 2244, 2262
BalI	TGGCCA	2 cut(s)	1179, 2322
BamHI	GGATCC	3 cut(s)	168, 1439, 1795
BanI	GGYRCC	1 cut(s)	191
BanII	GRGCYC	8 cut(s)	14, 162, 534, 1058, 1239, 1338, 1350, 2244
BbsI	GAAGAC	1 cut(s)	2113
Bbv12I	GWGCWC	6 cut(s)	14, 657, 1058, 1239, 1338, 1519
BbvI	GCAGC	5 cut(s)	373, 375, 898, 1370, 1693
BccI	CCATC	8 cut(s)	80, 502, 542, 1208, 1370, 2071, 2219, 2384
BceAI	ACGGC	5 cut(s)	205, 1242, 1355, 1361, 1465
BciT130I	CCWGG	3 cut(s)	296, 504, 2373
BcnI	CCSGG	2 cut(s)	214, 696
BcoDI	GTCTC	6 cut(s)	99, 646, 1153, 1410, 1432, 2226
BfaI	CTAG	4 cut(s)	1163, 2340, 2379, 2397
BfmI	CTRYAG	3 cut(s)	147, 413, 1018
BfoI	RGCGCY	2 cut(s)	1205, 1301
BfrI	CTTAAG	2 cut(s)	1853, 2069
BfuAI	ACCTGC	2 cut(s)	420, 1543
BglI	GCCNNNNNGGC	1 cut(s)	1919
BisI	GCNGC	8 cut(s)	345, 362, 389, 887, 1276, 1359, 1707, 1936
BlsI	GCNGC	8 cut(s)	346, 363, 390, 888, 1277, 1360, 1708, 1937
Bme1390I	CCNGG	5 cut(s)	214, 296, 504, 696, 2373
Bme18I	GGWCC	5 cut(s)	89, 442, 620, 1067, 1218
BmeRI	GACNNNNNGTC	1 cut(s)	263
BmgBI	CACGTC	2 cut(s)	1169, 1294
BmrFI	CCNGG	5 cut(s)	214, 296, 504, 696, 2373
BmrI	ACTGGG	1 cut(s)	2265
BmsI	GCATC	5 cut(s)	222, 618, 810, 1263, 1931
BmuI	ACTGGG	1 cut(s)	2265
BpiI	GAAGAC	1 cut(s)	2113
BpmI	CTGGAG	3 cut(s)	121, 386, 2412
Bpu14I	TTCGAA	1 cut(s)	1742
BpuMI	CCSGG	2 cut(s)	214, 696
BsaHI	GRCGYC	2 cut(s)	282, 1229
BsaI	GGTCTC	1 cut(s)	2226
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 722, 752
Bsc4I	CCNNNNNNNGG	6 cut(s)	128, 508, 527, 1450, 1451, 2372
Bse118I	RCCGGY	2 cut(s)	911, 1508
Bse1I	ACTGG	3 cut(s)	138, 2260, 2429
Bse21I	CCTNAGG	1 cut(s)	1136
BseBI	CCWGG	3 cut(s)	296, 504, 2373
BseGI	GGATG	7 cut(s)	237, 481, 513, 633, 1768, 2230, 2344
BseLI	CCNNNNNNNGG	6 cut(s)	128, 508, 527, 1450, 1451, 2372
BseMII	CTCAG	4 cut(s)	90, 987, 1332, 1995
BseNI	ACTGG	3 cut(s)	138, 2260, 2429
BsePI	GCGCGC	1 cut(s)	357
BseRI	GAGGAG	6 cut(s)	227, 1224, 1262, 1283, 1301, 2244
BseSI	GKGCMC	5 cut(s)	162, 534, 1350, 2244, 2262
BseX3I	CGGCCG	1 cut(s)	1506
BseXI	GCAGC	5 cut(s)	373, 375, 898, 1370, 1693
BseYI	CCCAGC	2 cut(s)	173, 438
BsgI	GTGCAG	2 cut(s)	452, 1383
Bsh1236I	CGCG	5 cut(s)	344, 359, 395, 452, 1457
Bsh1285I	CGRYCG	1 cut(s)	1509
BshNI	GGYRCC	1 cut(s)	191
BsiEI	CGRYCG	1 cut(s)	1509
BsiHKAI	GWGCWC	6 cut(s)	14, 657, 1058, 1239, 1338, 1519
BsiSI	CCGG	6 cut(s)	213, 268, 695, 912, 1509, 2422
BsiWI	CGTACG	1 cut(s)	447
BslFI	GGGAC	2 cut(s)	455, 2427
BslI	CCNNNNNNNGG	6 cut(s)	128, 508, 527, 1450, 1451, 2372
BsmAI	GTCTC	6 cut(s)	99, 646, 1153, 1410, 1432, 2226
BsmBI	CGTCTC	2 cut(s)	646, 1410
BsmFI	GGGAC	2 cut(s)	455, 2427
BsmI	GAATGC	2 cut(s)	1013, 2388
Bso31I	GGTCTC	1 cut(s)	2226
Bsp119I	TTCGAA	1 cut(s)	1742
Bsp120I	GGGCCC	4 cut(s)	158, 530, 1346, 2240
Bsp1407I	TGTACA	1 cut(s)	423
Bsp143I	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
Bsp19I	CCATGG	2 cut(s)	623, 2236
BspCNI	CTCAG	4 cut(s)	89, 988, 1333, 1996
BspFNI	CGCG	5 cut(s)	344, 359, 395, 452, 1457
BspMAI	CTGCAG	1 cut(s)	417
BspMI	ACCTGC	2 cut(s)	420, 1543
BspPI	GGATC	9 cut(s)	163, 176, 1311, 1434, 1447, 1536, 1790, 1803, 2177
BspT104I	TTCGAA	1 cut(s)	1742
BspT107I	GGYRCC	1 cut(s)	191
BspTI	CTTAAG	2 cut(s)	1853, 2069
BspTNI	GGTCTC	1 cut(s)	2226
BsrFI	RCCGGY	2 cut(s)	911, 1508
BsrGI	TGTACA	1 cut(s)	423
BsrI	ACTGG	3 cut(s)	138, 2260, 2429
BssAI	RCCGGY	2 cut(s)	911, 1508
BssHII	GCGCGC	1 cut(s)	357
BssMI	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
BssNI	GRCGYC	2 cut(s)	282, 1229
BssT1I	CCWWGG	4 cut(s)	623, 1320, 2236, 2244
Bst2UI	CCWGG	3 cut(s)	296, 504, 2373
Bst4CI	ACNGT	9 cut(s)	39, 196, 1022, 1062, 1243, 1404, 1476, 1810, 1993
Bst6I	CTCTTC	4 cut(s)	465, 1726, 2132, 2214
BstACI	GRCGYC	2 cut(s)	282, 1229
BstAFI	CTTAAG	2 cut(s)	1853, 2069
BstAUI	TGTACA	1 cut(s)	423
BstBI	TTCGAA	1 cut(s)	1742
BstDEI	CTNAG	5 cut(s)	76, 996, 1136, 1341, 2004
BstDSI	CCRYGG	5 cut(s)	623, 1224, 1992, 2236, 2323
BstF5I	GGATG	7 cut(s)	237, 481, 513, 633, 1768, 2230, 2344
BstFNI	CGCG	5 cut(s)	344, 359, 395, 452, 1457
BstH2I	RGCGCY	2 cut(s)	1205, 1301
BstHHI	GCGC	7 cut(s)	344, 359, 361, 1204, 1254, 1300, 1457
BstKTI	GATC	9 cut(s)	171, 324, 1319, 1442, 1450, 1501, 1531, 1798, 2172
BstMAI	GTCTC	6 cut(s)	99, 646, 1153, 1410, 1432, 2226
BstMBI	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
BstMCI	CGRYCG	1 cut(s)	1509
BstNI	CCWGG	3 cut(s)	296, 504, 2373
BstNSI	RCATGY	3 cut(s)	1603, 1973, 2056
BstSCI	CCNGG	5 cut(s)	212, 294, 502, 694, 2371
BstSFI	CTRYAG	3 cut(s)	147, 413, 1018
BstSLI	GKGCMC	5 cut(s)	162, 534, 1350, 2244, 2262
BstUI	CGCG	5 cut(s)	344, 359, 395, 452, 1457
BstV1I	GCAGC	5 cut(s)	373, 375, 898, 1370, 1693
BstV2I	GAAGAC	1 cut(s)	2113
BstX2I	RGATCY	5 cut(s)	168, 1316, 1439, 1528, 1795
BstYI	RGATCY	5 cut(s)	168, 1316, 1439, 1528, 1795
BstZI	CGGCCG	1 cut(s)	1506
Bsu36I	CCTNAGG	1 cut(s)	1136
BtgI	CCRYGG	5 cut(s)	623, 1224, 1992, 2236, 2323
BtrI	CACGTC	2 cut(s)	1169, 1294
BtsCI	GGATG	7 cut(s)	237, 481, 513, 633, 1768, 2230, 2344
BtsI	GCAGTG	3 cut(s)	600, 984, 1395
BveI	ACCTGC	2 cut(s)	420, 1543
CfoI	GCGC	7 cut(s)	344, 359, 361, 1204, 1254, 1300, 1457
Cfr10I	RCCGGY	2 cut(s)	911, 1508
CseI	GACGC	7 cut(s)	152, 290, 384, 1218, 1364, 1446, 1644
Csp6I	GTAC	7 cut(s)	245, 424, 448, 1027, 1312, 2086, 2208
CviAII	CATG	8 cut(s)	43, 624, 866, 901, 1600, 1970, 2053, 2237
CviQI	GTAC	7 cut(s)	245, 424, 448, 1027, 1312, 2086, 2208
DdeI	CTNAG	5 cut(s)	76, 996, 1136, 1341, 2004
DpnI	GATC	9 cut(s)	170, 323, 1318, 1441, 1449, 1500, 1530, 1797, 2171
DpnII	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
DraI	TTTAAA	1 cut(s)	2025
DraIII	CACNNNGTG	1 cut(s)	1064
DrdI	GACNNNNNNGTC	2 cut(s)	1167, 1424
DriI	GACNNNNNGTC	1 cut(s)	263
DseDI	GACNNNNNNGTC	2 cut(s)	1167, 1424
EaeI	YGGCCR	3 cut(s)	1177, 1506, 2320
EagI	CGGCCG	1 cut(s)	1506
Eam1104I	CTCTTC	4 cut(s)	465, 1726, 2132, 2214
Eam1105I	GACNNNNNGTC	1 cut(s)	263
EarI	CTCTTC	4 cut(s)	465, 1726, 2132, 2214
EciI	GGCGGA	2 cut(s)	1212, 1398
Ecl136II	GAGCTC	4 cut(s)	12, 1056, 1237, 1336
EclXI	CGGCCG	1 cut(s)	1506
Eco130I	CCWWGG	4 cut(s)	623, 1320, 2236, 2244
Eco24I	GRGCYC	8 cut(s)	14, 162, 534, 1058, 1239, 1338, 1350, 2244
Eco31I	GGTCTC	1 cut(s)	2226
Eco47I	GGWCC	5 cut(s)	89, 442, 620, 1067, 1218
Eco47III	AGCGCT	1 cut(s)	1203
Eco52I	CGGCCG	1 cut(s)	1506
Eco53kI	GAGCTC	4 cut(s)	12, 1056, 1237, 1336
Eco57I	CTGAAG	2 cut(s)	733, 1645
Eco81I	CCTNAGG	1 cut(s)	1136
EcoICRI	GAGCTC	4 cut(s)	12, 1056, 1237, 1336
EcoO109I	RGGNCCY	2 cut(s)	442, 1346
EcoRII	CCWGG	3 cut(s)	294, 502, 2371
EcoT14I	CCWWGG	4 cut(s)	623, 1320, 2236, 2244
EcoT22I	ATGCAT	1 cut(s)	1898
EcoT38I	GRGCYC	8 cut(s)	14, 162, 534, 1058, 1239, 1338, 1350, 2244
ErhI	CCWWGG	4 cut(s)	623, 1320, 2236, 2244
Esp3I	CGTCTC	2 cut(s)	646, 1410
FaeI	CATG	8 cut(s)	46, 627, 869, 904, 1603, 1973, 2056, 2240
FalI	AAGNNNNNCTT	2 cut(s)	548, 580
FaqI	GGGAC	2 cut(s)	455, 2427
FatI	CATG	8 cut(s)	42, 623, 865, 900, 1599, 1969, 2052, 2236
FauI	CCCGC	4 cut(s)	400, 1357, 2049, 2123
FblI	GTMKAC	3 cut(s)	153, 256, 1171
Fnu4HI	GCNGC	8 cut(s)	345, 362, 389, 887, 1276, 1359, 1707, 1936
FokI	GGATG	7 cut(s)	244, 488, 520, 640, 1755, 2237, 2331
FriOI	GRGCYC	8 cut(s)	14, 162, 534, 1058, 1239, 1338, 1350, 2244
Fsp4HI	GCNGC	8 cut(s)	345, 362, 389, 887, 1276, 1359, 1707, 1936
FspBI	CTAG	4 cut(s)	1163, 2340, 2379, 2397
GlaI	GCGC	7 cut(s)	343, 358, 360, 1203, 1253, 1299, 1456
GluI	GCNGC	8 cut(s)	345, 362, 389, 887, 1276, 1359, 1707, 1936
GsaI	CCCAGC	2 cut(s)	177, 442
GsuI	CTGGAG	3 cut(s)	121, 386, 2412
HaeII	RGCGCY	2 cut(s)	1205, 1301
HapII	CCGG	6 cut(s)	213, 268, 695, 912, 1509, 2422
HgaI	GACGC	7 cut(s)	152, 290, 384, 1218, 1364, 1446, 1644
HhaI	GCGC	7 cut(s)	344, 359, 361, 1204, 1254, 1300, 1457
Hin1I	GRCGYC	2 cut(s)	282, 1229
Hin1II	CATG	8 cut(s)	46, 627, 869, 904, 1603, 1973, 2056, 2240
Hin6I	GCGC	7 cut(s)	342, 357, 359, 1202, 1252, 1298, 1455
HinP1I	GCGC	7 cut(s)	342, 357, 359, 1202, 1252, 1298, 1455
HindIII	AAGCTT	2 cut(s)	1676, 2063
HpaII	CCGG	6 cut(s)	213, 268, 695, 912, 1509, 2422
HphI	GGTGA	8 cut(s)	617, 841, 1178, 1231, 1372, 1513, 1768, 2071
Hpy166II	GTNNAC	9 cut(s)	154, 257, 1027, 1067, 1172, 1221, 1806, 2099, 2210
Hpy188III	TCNNGA	2 cut(s)	496, 556
Hpy8I	GTNNAC	9 cut(s)	154, 257, 1027, 1067, 1172, 1221, 1806, 2099, 2210
Hpy99I	CGWCG	9 cut(s)	284, 400, 677, 1247, 1358, 1370, 1376, 1490, 1493
HpyCH4III	ACNGT	9 cut(s)	39, 196, 1022, 1062, 1243, 1404, 1476, 1810, 1993
HpyCH4IV	ACGT	7 cut(s)	335, 378, 546, 639, 1168, 1293, 2156
HpyF3I	CTNAG	5 cut(s)	76, 996, 1136, 1341, 2004
HpySE526I	ACGT	7 cut(s)	335, 378, 546, 639, 1168, 1293, 2156
Hsp92I	GRCGYC	2 cut(s)	282, 1229
Hsp92II	CATG	8 cut(s)	46, 627, 869, 904, 1603, 1973, 2056, 2240
HspAI	GCGC	7 cut(s)	342, 357, 359, 1202, 1252, 1298, 1455
KflI	GGGWCCC	1 cut(s)	442
KroI	GCCGGC	2 cut(s)	911, 1508
KroNI	GCCGGC	2 cut(s)	913, 1510
Kzo9I	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
LmnI	GCTCC	6 cut(s)	9, 17, 240, 660, 1199, 1249
Lsp1109I	GCAGC	5 cut(s)	373, 375, 898, 1370, 1693
LweI	GCATC	5 cut(s)	222, 618, 810, 1263, 1931
MaeI	CTAG	4 cut(s)	1163, 2340, 2379, 2397
MaeII	ACGT	7 cut(s)	335, 378, 546, 639, 1168, 1293, 2156
MaeIII	GTNAC	4 cut(s)	140, 331, 728, 1378
MalI	GATC	9 cut(s)	170, 323, 1318, 1441, 1449, 1500, 1530, 1797, 2171
MboI	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
MboII	GAAGA	8 cut(s)	482, 689, 1713, 1762, 2048, 2118, 2149, 2231
MfeI	CAATTG	1 cut(s)	2349
MflI	RGATCY	5 cut(s)	168, 1316, 1439, 1528, 1795
MlsI	TGGCCA	2 cut(s)	1179, 2322
MluCI	AATT	5 cut(s)	779, 946, 979, 1579, 2349
MluI	ACGCGT	1 cut(s)	450
MluNI	TGGCCA	2 cut(s)	1179, 2322
MlyI	GAGTC	6 cut(s)	377, 731, 1385, 1412, 1712, 2419
MmeI	TCCRAC	5 cut(s)	146, 680, 975, 1417, 1509
Mox20I	TGGCCA	2 cut(s)	1179, 2322
Mph1103I	ATGCAT	1 cut(s)	1898
MroNI	GCCGGC	2 cut(s)	911, 1508
MroXI	GAANNNNTTC	1 cut(s)	2332
MscI	TGGCCA	2 cut(s)	1179, 2322
MseI	TTAA	8 cut(s)	600, 1533, 1614, 1697, 1854, 2024, 2070, 2446
MslI	CAYNNNNRTG	6 cut(s)	25, 305, 750, 870, 2057, 2202
Msp20I	TGGCCA	2 cut(s)	1179, 2322
MspA1I	CMGCKG	2 cut(s)	177, 364
MspCI	CTTAAG	2 cut(s)	1853, 2069
MspI	CCGG	6 cut(s)	213, 268, 695, 912, 1509, 2422
MspR9I	CCNGG	5 cut(s)	214, 296, 504, 696, 2373
MunI	CAATTG	1 cut(s)	2349
Mva1269I	GAATGC	2 cut(s)	1013, 2388
MvaI	CCWGG	3 cut(s)	296, 504, 2373
MvnI	CGCG	5 cut(s)	344, 359, 395, 452, 1457
NaeI	GCCGGC	2 cut(s)	913, 1510
NciI	CCSGG	2 cut(s)	214, 696
NcoI	CCATGG	2 cut(s)	623, 2236
NdeII	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
NgoMIV	GCCGGC	2 cut(s)	911, 1508
NlaIII	CATG	8 cut(s)	46, 627, 869, 904, 1603, 1973, 2056, 2240
NmeAIII	GCCGAG	1 cut(s)	1357
NmuCI	GTSAC	3 cut(s)	140, 331, 1378
NsiI	ATGCAT	1 cut(s)	1898
NspI	RCATGY	3 cut(s)	1603, 1973, 2056
NspV	TTCGAA	1 cut(s)	1742
OliI	CACNNNNGTG	1 cut(s)	750
PaeI	GCATGC	2 cut(s)	1973, 2056
PaqCI	CACCTGC	1 cut(s)	1543
PasI	CCCWGGG	1 cut(s)	503
PauI	GCGCGC	1 cut(s)	357
PciI	ACATGT	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	7 cut(s)	724, 1290, 1299, 1362, 1374, 1494, 1652
PctI	GAATGC	2 cut(s)	1013, 2388
PdiI	GCCGGC	2 cut(s)	913, 1510
PdmI	GAANNNNTTC	1 cut(s)	2332
PfeI	GAWTC	6 cut(s)	710, 1468, 1822, 2129, 2403, 2437
Pfl23II	CGTACG	1 cut(s)	447
PflMI	CCANNNNNTGG	1 cut(s)	2372
PkrI	GCNGC	8 cut(s)	346, 363, 390, 888, 1277, 1360, 1708, 1937
PleI	GAGTC	6 cut(s)	376, 731, 1385, 1412, 1712, 2419
PpsI	GAGTC	6 cut(s)	376, 731, 1385, 1412, 1712, 2419
PpuMI	RGGWCCY	1 cut(s)	442
PscI	ACATGT	1 cut(s)	1599
Psp124BI	GAGCTC	4 cut(s)	14, 1058, 1239, 1338
Psp5II	RGGWCCY	1 cut(s)	442
Psp6I	CCWGG	3 cut(s)	294, 502, 2371
PspFI	CCCAGC	2 cut(s)	173, 438
PspGI	CCWGG	3 cut(s)	294, 502, 2371
PspLI	CGTACG	1 cut(s)	447
PspOMI	GGGCCC	4 cut(s)	158, 530, 1346, 2240
PspPPI	RGGWCCY	1 cut(s)	442
PstI	CTGCAG	1 cut(s)	417
PsuI	RGATCY	5 cut(s)	168, 1316, 1439, 1528, 1795
PteI	GCGCGC	1 cut(s)	357
PvuII	CAGCTG	2 cut(s)	177, 364
RsaI	GTAC	7 cut(s)	246, 425, 449, 1028, 1313, 2087, 2209
RsaNI	GTAC	7 cut(s)	245, 424, 448, 1027, 1312, 2086, 2208
RseI	CAYNNNNRTG	6 cut(s)	25, 305, 750, 870, 2057, 2202
SacI	GAGCTC	4 cut(s)	14, 1058, 1239, 1338
SaqAI	TTAA	8 cut(s)	600, 1533, 1614, 1697, 1854, 2024, 2070, 2446
SatI	GCNGC	8 cut(s)	345, 362, 389, 887, 1276, 1359, 1707, 1936
Sau3AI	GATC	9 cut(s)	168, 321, 1316, 1439, 1447, 1498, 1528, 1795, 2169
SchI	GAGTC	6 cut(s)	377, 731, 1385, 1412, 1712, 2419
ScrFI	CCNGG	5 cut(s)	214, 296, 504, 696, 2373
SfaNI	GCATC	5 cut(s)	222, 618, 810, 1263, 1931
SfcI	CTRYAG	3 cut(s)	147, 413, 1018
SfuI	TTCGAA	1 cut(s)	1742
SinI	GGWCC	5 cut(s)	89, 442, 620, 1067, 1218
SmiMI	CAYNNNNRTG	6 cut(s)	25, 305, 750, 870, 2057, 2202
SmlI	CTYRAG	2 cut(s)	1853, 2069
SmoI	CTYRAG	2 cut(s)	1853, 2069
SphI	GCATGC	2 cut(s)	1973, 2056
Sse9I	AATT	5 cut(s)	779, 946, 979, 1579, 2349
SspI	AATATT	1 cut(s)	1562
SspMI	CTAG	4 cut(s)	1163, 2340, 2379, 2397
SstI	GAGCTC	4 cut(s)	14, 1058, 1239, 1338
StyD4I	CCNGG	5 cut(s)	212, 294, 502, 694, 2371
StyI	CCWWGG	4 cut(s)	623, 1320, 2236, 2244
TaaI	ACNGT	9 cut(s)	39, 196, 1022, 1062, 1243, 1404, 1476, 1810, 1993
TaiI	ACGT	7 cut(s)	338, 381, 549, 642, 1171, 1296, 2159
TasI	AATT	5 cut(s)	779, 946, 979, 1579, 2349
TatI	WGTACW	3 cut(s)	423, 1026, 1311
TauI	GCSGC	3 cut(s)	347, 1278, 1938
TfiI	GAWTC	6 cut(s)	710, 1468, 1822, 2129, 2403, 2437
Tru1I	TTAA	8 cut(s)	600, 1533, 1614, 1697, 1854, 2024, 2070, 2446
Tru9I	TTAA	8 cut(s)	600, 1533, 1614, 1697, 1854, 2024, 2070, 2446
TseFI	GTSAC	3 cut(s)	140, 331, 1378
TseI	GCWGC	5 cut(s)	361, 388, 886, 1358, 1706
Tsp45I	GTSAC	3 cut(s)	140, 331, 1378
TspDTI	ATGAA	5 cut(s)	31, 1590, 1685, 1757, 2325
TspGWI	ACGGA	2 cut(s)	319, 2340
Van91I	CCANNNNNTGG	1 cut(s)	2372
Vha464I	CTTAAG	2 cut(s)	1853, 2069
VpaK11BI	GGWCC	5 cut(s)	89, 442, 620, 1067, 1218
XapI	RAATTY	2 cut(s)	979, 1579
XceI	RCATGY	3 cut(s)	1603, 1973, 2056
XmiI	GTMKAC	3 cut(s)	153, 256, 1171
XmnI	GAANNNNTTC	1 cut(s)	2332
XspI	CTAG	4 cut(s)	1163, 2340, 2379, 2397
Zsp2I	ATGCAT	1 cut(s)	1898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.