Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0010843

Physical Location & Seq

Genomic Coordinates Reverse (-)

4153097 .. 4153315

Gene Structure 219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G084700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 219 bp

ATGGCAAAGGAATTGAGGTACATGCATAACTGGGGCGAGGTGGCCCCAGCACTTGTTATACCTCACGAGAAGCCCTCCAATAATATTTCGAAATTGGAGACCATTGCCGAAGAAGGATCCGAGAGCTTTGAGATTATGCCAAACGGAGTGGTGTTTCTCTTTCCAGTGTTTCTTTCTTTTTTGACTTATTACTTCATGTTGTATAGGCAGATTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015035 GO:0015036 GO:0016020 GO:0016491 GO:0016667 GO:0016853 GO:0016860 GO:0016864 GO:0019538 GO:0031984 GO:0034975 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04141 ko05110 map04141 map05110

Pfam Domains

Protein Families

ERO1

Protein Analysis

73

Amino Acids

8.38

Weight (kDa)

5.18

Isoelectric Point (pI)

60.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010843)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18422
prunus_persica	Prupe.4G084500_v2.0.a1 Prupe.4G084700_v2.0.a1 Prupe.6G298100_v2.0.a1
pyrus_communis	pycom10g21540
rosa_chinensis	RchiOBHm_Chr5g0014601 RchiOBHm_Chr5g0014611
rosa_roxburghii	Rroxscaffold_1G00061840 Rroxscaffold_1G00061870 Rroxscaffold_1G00061880
rosa_samantha	Rh5AG115000 Rh5AG115200 Rh5AG115300 Rh5BG111900 Rh5BG112000 Rh5CG123400 Rh5CG123500 Rh5CG123600 Rh5DG111400 Rh5DG111600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	2 cut(s)	111, 124
AfaI	GTAC	1 cut(s)	20
AluBI	AGCT	1 cut(s)	126
AluI	AGCT	1 cut(s)	126
Alw26I	GTCTC	1 cut(s)	92
AlwI	GGATC	2 cut(s)	111, 124
AoxI	GGCC	1 cut(s)	42
AspS9I	GGNCC	1 cut(s)	43
AsuII	TTCGAA	1 cut(s)	89
BamHI	GGATCC	1 cut(s)	116
BauI	CACGAG	1 cut(s)	65
BcoDI	GTCTC	1 cut(s)	92
BmgT120I	GGNCC	1 cut(s)	43
BmiI	GGNNCC	2 cut(s)	45, 118
BmrI	ACTGGG	1 cut(s)	40
BmuI	ACTGGG	1 cut(s)	40
BplI	GAGNNNNNCTC	2 cut(s)	59, 91
Bpu14I	TTCGAA	1 cut(s)	89
BsaI	GGTCTC	1 cut(s)	92
Bse1I	ACTGG	2 cut(s)	35, 164
Bse3DI	GCAATG	1 cut(s)	102
BseMI	GCAATG	1 cut(s)	102
BseNI	ACTGG	2 cut(s)	35, 164
BseYI	CCCAGC	1 cut(s)	46
BshFI	GGCC	1 cut(s)	44
BsmAI	GTCTC	1 cut(s)	92
BsnI	GGCC	1 cut(s)	44
Bso31I	GGTCTC	1 cut(s)	92
Bsp119I	TTCGAA	1 cut(s)	89
Bsp143I	GATC	1 cut(s)	116
BspANI	GGCC	1 cut(s)	44
BspLI	GGNNCC	2 cut(s)	45, 118
BspPI	GGATC	2 cut(s)	111, 124
BspT104I	TTCGAA	1 cut(s)	89
BspTNI	GGTCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	102
BsrI	ACTGG	2 cut(s)	35, 164
BssMI	GATC	1 cut(s)	116
BssSI	CACGAG	1 cut(s)	65
Bst2BI	CACGAG	1 cut(s)	65
BstBI	TTCGAA	1 cut(s)	89
BstKTI	GATC	1 cut(s)	119
BstMAI	GTCTC	1 cut(s)	92
BstMBI	GATC	1 cut(s)	116
BstNSI	RCATGY	1 cut(s)	25
BstX2I	RGATCY	1 cut(s)	116
BstYI	RGATCY	1 cut(s)	116
BsuRI	GGCC	1 cut(s)	44
BtsIMutI	CAGTG	1 cut(s)	171
Cfr13I	GGNCC	1 cut(s)	43
Csp6I	GTAC	1 cut(s)	19
CspCI	CAANNNNNGTGG	2 cut(s)	129, 164
CviAII	CATG	2 cut(s)	22, 196
CviJI	RGCY	3 cut(s)	44, 73, 126
CviKI_1	RGCY	3 cut(s)	44, 73, 126
CviQI	GTAC	1 cut(s)	19
DpnI	GATC	1 cut(s)	118
DpnII	GATC	1 cut(s)	116
Eco31I	GGTCTC	1 cut(s)	92
EcoT22I	ATGCAT	1 cut(s)	27
FaeI	CATG	2 cut(s)	25, 199
FaiI	YATR	6 cut(s)	23, 27, 59, 137, 197, 204
FatI	CATG	2 cut(s)	21, 195
GsaI	CCCAGC	1 cut(s)	50
HaeIII	GGCC	1 cut(s)	44
Hin1II	CATG	2 cut(s)	25, 199
Hpy188I	TCNGA	1 cut(s)	121
Hpy188III	TCNNGA	1 cut(s)	65
HpyAV	CCTTC	1 cut(s)	107
HpyCH4V	TGCA	1 cut(s)	25
Hsp92II	CATG	2 cut(s)	25, 199
Kzo9I	GATC	1 cut(s)	116
LpnPI	CCDG	3 cut(s)	16, 60, 177
MalI	GATC	1 cut(s)	118
MboI	GATC	1 cut(s)	116
MboII	GAAGA	1 cut(s)	122
MflI	RGATCY	1 cut(s)	116
MluCI	AATT	2 cut(s)	11, 92
MnlI	CCTC	4 cut(s)	9, 31, 72, 85
Mph1103I	ATGCAT	1 cut(s)	27
NdeII	GATC	1 cut(s)	116
NlaIII	CATG	2 cut(s)	25, 199
NlaIV	GGNNCC	2 cut(s)	45, 118
NsiI	ATGCAT	1 cut(s)	27
NspI	RCATGY	1 cut(s)	25
NspV	TTCGAA	1 cut(s)	89
PspFI	CCCAGC	1 cut(s)	46
PspN4I	GGNNCC	2 cut(s)	45, 118
PspPI	GGNCC	1 cut(s)	43
PsuI	RGATCY	1 cut(s)	116
RsaI	GTAC	1 cut(s)	20
RsaNI	GTAC	1 cut(s)	19
Sau3AI	GATC	1 cut(s)	116
Sau96I	GGNCC	1 cut(s)	43
SetI	ASST	4 cut(s)	20, 42, 64, 128
SfuI	TTCGAA	1 cut(s)	89
Sse9I	AATT	2 cut(s)	11, 92
SspI	AATATT	1 cut(s)	85
TaqI	TCGA	1 cut(s)	89
TasI	AATT	2 cut(s)	11, 92
TscAI	CASTG	1 cut(s)	171
TspDTI	ATGAA	1 cut(s)	184
TspGWI	ACGGA	1 cut(s)	159
TspRI	CASTG	1 cut(s)	171
XceI	RCATGY	1 cut(s)	25
Zsp2I	ATGCAT	1 cut(s)	27

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.