Rh5AG115300

Endoplasmic reticulum oxidoreductin-1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
10687370 .. 10707414
20045 bp
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UTR
Exon/CDS
Intron
Rh5AG115300.1

Sequence Viewer

Length: 234 bp
ATGGGTCTGATGGGAAGGGAAATGAGGATCATGCAGGACTTGGGCGAAGTTGCACCAGCACTTATTATTCCCCACGAGAAGCCTTCGAATAACATTTCGAAAATGGAGACCATCGTTGAAGATGAAGGGCTATTTTCTGATTATCATAGCTTTCAGATTGTGCCAAAGCGAGTGGTGTTTCTTCTTCCGGAACTAAAAGATGTGGTGAAGATAGTCAAGATACTATATGCATAA

Protein Analysis

77

Amino Acids

8.78

Weight (kDa)

5.58

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 187
AclWI GGATC 1 cut(s) 35
AgsI TTSAA 1 cut(s) 119
AluBI AGCT 1 cut(s) 150
AluI AGCT 1 cut(s) 150
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 1 cut(s) 35
Aor13HI TCCGGA 1 cut(s) 187
AsuHPI GGTGA 1 cut(s) 217
AsuII TTCGAA 2 cut(s) 86, 98
BauI CACGAG 1 cut(s) 74
BccI CCATC 2 cut(s) 4, 119
BcoDI GTCTC 1 cut(s) 101
Bpu14I TTCGAA 2 cut(s) 86, 98
BsaI GGTCTC 1 cut(s) 101
BsaWI WCCGGW 1 cut(s) 187
BseAI TCCGGA 1 cut(s) 187
BsiSI CCGG 1 cut(s) 188
BsmAI GTCTC 1 cut(s) 101
Bso31I GGTCTC 1 cut(s) 101
Bsp119I TTCGAA 2 cut(s) 86, 98
Bsp13I TCCGGA 1 cut(s) 187
Bsp143I GATC 1 cut(s) 27
BspEI TCCGGA 1 cut(s) 187
BspPI GGATC 1 cut(s) 35
BspT104I TTCGAA 2 cut(s) 86, 98
BspTNI GGTCTC 1 cut(s) 101
BssMI GATC 1 cut(s) 27
BssSI CACGAG 1 cut(s) 74
Bst2BI CACGAG 1 cut(s) 74
BstBI TTCGAA 2 cut(s) 86, 98
BstKTI GATC 1 cut(s) 30
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 1 cut(s) 27
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviAII CATG 1 cut(s) 31
CviJI RGCY 3 cut(s) 82, 130, 150
CviKI_1 RGCY 3 cut(s) 82, 130, 150
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 101
EcoT22I ATGCAT 1 cut(s) 232
FaeI CATG 1 cut(s) 34
FaiI YATR 5 cut(s) 32, 147, 226, 228, 232
FatI CATG 1 cut(s) 30
HapII CCGG 1 cut(s) 188
Hin1II CATG 1 cut(s) 34
HpaII CCGG 1 cut(s) 188
HphI GGTGA 1 cut(s) 217
Hpy188I TCNGA 3 cut(s) 9, 139, 156
Hpy188III TCNNGA 2 cut(s) 188, 217
HpyAV CCTTC 3 cut(s) 9, 93, 119
HpyCH4V TGCA 3 cut(s) 34, 53, 230
Hsp92II CATG 1 cut(s) 34
Kpn2I TCCGGA 1 cut(s) 187
Kzo9I GATC 1 cut(s) 27
LpnPI CCDG 3 cut(s) 20, 69, 201
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MboII GAAGA 4 cut(s) 131, 173, 176, 220
MnlI CCTC 1 cut(s) 18
Mph1103I ATGCAT 1 cut(s) 232
MroI TCCGGA 1 cut(s) 187
MspI CCGG 1 cut(s) 188
NdeII GATC 1 cut(s) 27
NlaIII CATG 1 cut(s) 34
NsiI ATGCAT 1 cut(s) 232
NspV TTCGAA 2 cut(s) 86, 98
Sau3AI GATC 1 cut(s) 27
SetI ASST 1 cut(s) 152
SfuI TTCGAA 2 cut(s) 86, 98
SgeI CNNG 9 cut(s) 43, 47, 52, 68, 86, 88, 182, 200, 229
TaqI TCGA 2 cut(s) 86, 98
TspDTI ATGAA 1 cut(s) 138
Zsp2I ATGCAT 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.