No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18422 |
| prunus_persica | Prupe.4G084500_v2.0.a1 Prupe.4G084700_v2.0.a1 Prupe.6G298100_v2.0.a1 |
| pyrus_communis | pycom10g21540 |
| rosa_chinensis | RchiOBHm_Chr5g0014601 RchiOBHm_Chr5g0014611 |
| rosa_roxburghii | Rroxscaffold_1G00061840 Rroxscaffold_1G00061870 Rroxscaffold_1G00061880 |
| rosa_samantha | Rh5AG115000 Rh5AG115200 Rh5AG115300 Rh5BG111900 Rh5BG112000 Rh5CG123400 Rh5CG123500 Rh5CG123600 Rh5DG111400 Rh5DG111600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 124 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AgsI | TTSAA | 3 cut(s) | 16, 110, 131 |
| AjnI | CCWGG | 1 cut(s) | 54 |
| AluBI | AGCT | 1 cut(s) | 77 |
| AluI | AGCT | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 124 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 11 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BanII | GRGCYC | 1 cut(s) | 55 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 147, 179 |
| BciT130I | CCWGG | 1 cut(s) | 56 |
| BfaI | CTAG | 2 cut(s) | 81, 95 |
| Bme1390I | CCNGG | 1 cut(s) | 56 |
| BmrFI | CCNGG | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseBI | CCWGG | 1 cut(s) | 56 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| Bsp1286I | GDGCHC | 1 cut(s) | 55 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BspHI | TCATGA | 1 cut(s) | 194 |
| BspPI | GGATC | 1 cut(s) | 124 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssMI | GATC | 1 cut(s) | 116 |
| Bst2UI | CCWGG | 1 cut(s) | 56 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 50 |
| BstNI | CCWGG | 1 cut(s) | 56 |
| BstNSI | RCATGY | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 54 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| CciI | TCATGA | 1 cut(s) | 194 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviAII | CATG | 2 cut(s) | 22, 195 |
| CviJI | RGCY | 3 cut(s) | 53, 77, 126 |
| CviKI_1 | RGCY | 3 cut(s) | 53, 77, 126 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| Eco24I | GRGCYC | 1 cut(s) | 55 |
| EcoRII | CCWGG | 1 cut(s) | 54 |
| EcoT38I | GRGCYC | 1 cut(s) | 55 |
| FaeI | CATG | 2 cut(s) | 25, 198 |
| FaiI | YATR | 3 cut(s) | 23, 187, 196 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 134, 166 |
| FatI | CATG | 2 cut(s) | 21, 194 |
| FriOI | GRGCYC | 1 cut(s) | 55 |
| FspBI | CTAG | 2 cut(s) | 81, 95 |
| Hin1II | CATG | 2 cut(s) | 25, 198 |
| HindIII | AAGCTT | 1 cut(s) | 75 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 1 cut(s) | 195 |
| HpyAV | CCTTC | 3 cut(s) | 107, 116, 177 |
| HpyCH4V | TGCA | 2 cut(s) | 25, 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 50 |
| Hsp92II | CATG | 2 cut(s) | 25, 198 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LpnPI | CCDG | 3 cut(s) | 41, 68, 164 |
| MaeI | CTAG | 2 cut(s) | 81, 95 |
| MaeIII | GTNAC | 1 cut(s) | 58 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MboII | GAAGA | 2 cut(s) | 122, 155 |
| MhlI | GDGCHC | 1 cut(s) | 55 |
| MluCI | AATT | 1 cut(s) | 28 |
| MnlI | CCTC | 3 cut(s) | 31, 181, 184 |
| MroXI | GAANNNNTTC | 1 cut(s) | 11 |
| MspR9I | CCNGG | 1 cut(s) | 56 |
| MvaI | CCWGG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 50 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIII | CATG | 2 cut(s) | 25, 198 |
| NspI | RCATGY | 1 cut(s) | 25 |
| PaeI | GCATGC | 1 cut(s) | 25 |
| PagI | TCATGA | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 1 cut(s) | 11 |
| Psp6I | CCWGG | 1 cut(s) | 54 |
| PspGI | CCWGG | 1 cut(s) | 54 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| ScrFI | CCNGG | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 55 |
| SetI | ASST | 3 cut(s) | 42, 79, 194 |
| SgeI | CNNG | 8 cut(s) | 34, 60, 67, 68, 93, 107, 163, 191 |
| SphI | GCATGC | 1 cut(s) | 25 |
| Sse9I | AATT | 1 cut(s) | 28 |
| SspMI | CTAG | 2 cut(s) | 81, 95 |
| StyD4I | CCNGG | 1 cut(s) | 54 |
| TasI | AATT | 1 cut(s) | 28 |
| XceI | RCATGY | 1 cut(s) | 25 |
| XmnI | GAANNNNTTC | 1 cut(s) | 11 |
| XspI | CTAG | 2 cut(s) | 81, 95 |