PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16270 AT1G16270 AT1G16270 AT1G79570 AT1G79570 AT1G79570 AT1G79570 AT1G79570 |
| fragaria_vesca | FvH4_3g14670 FvH4_3g14670 FvH4_3g14670 |
| malus_domestica | MD05G1229400.v1.1 MD10G1208700.v1.1 |
| prunus_persica | Prupe.4G132000_v2.0.a1 Prupe.4G132000_v2.0.a1 |
| pyrus_communis | pycom05g21030 pycom10g17740 pycom10g17750 |
| rosa_chinensis | RchiOBHm_Chr5g0024161 |
| rosa_laevigata | RLG00000032775 |
| rosa_multiflora | Rmu_co8405733.1_g000001 Rmu_sc0004033.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00055080 Rroxscaffold_1G00055700 |
| rosa_rugosa | Rorug05G0082100 |
| rosa_samantha | Rh5AG172700 Rh5BG169300 Rh5CG185100 Rh5DG171600 |
| rosa_wichuraiana | Rw5G015580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 630, 3717 |
| AarI | CACCTGC | 1 cut(s) | 1297 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1822 |
| Acc36I | ACCTGC | 2 cut(s) | 37, 1297 |
| AccB1I | GGYRCC | 1 cut(s) | 3406 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2461 |
| AccI | GTMKAC | 2 cut(s) | 1638, 1826 |
| AciI | CCGC | 4 cut(s) | 1960, 2630, 3031, 3635 |
| AclI | AACGTT | 1 cut(s) | 3392 |
| AcoI | YGGCCR | 3 cut(s) | 1162, 3314, 3636 |
| AcsI | RAATTY | 6 cut(s) | 20, 258, 1285, 1653, 2624, 2788 |
| AcuI | CTGAAG | 3 cut(s) | 1865, 2382, 2912 |
| AdeI | CACNNNGTG | 1 cut(s) | 826 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 533, 1193, 1220, 1507, 2282, 2378, 2461, 2713, 2834 |
| AflIII | ACRYGT | 1 cut(s) | 1092 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 880, 1582 |
| Alw21I | GWGCWC | 3 cut(s) | 920, 1377, 2203 |
| Alw26I | GTCTC | 5 cut(s) | 962, 1985, 2280, 2959, 3556 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 284 |
| Ama87I | CYCGRG | 1 cut(s) | 1363 |
| AoxI | GGCC | 7 cut(s) | 329, 1162, 2157, 2194, 3314, 3636, 3641 |
| ApoI | RAATTY | 6 cut(s) | 20, 258, 1285, 1653, 2624, 2788 |
| AseI | ATTAAT | 1 cut(s) | 2579 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1353, 1653, 2313, 2637 |
| AspLEI | GCGC | 1 cut(s) | 2764 |
| AspS9I | GGNCC | 6 cut(s) | 329, 755, 874, 2194, 2602, 3101 |
| AsuHPI | GGTGA | 8 cut(s) | 230, 569, 845, 1132, 1321, 1741, 3050, 3344 |
| AsuII | TTCGAA | 2 cut(s) | 3169, 3347 |
| AsuNHI | GCTAGC | 1 cut(s) | 3692 |
| AvaI | CYCGRG | 1 cut(s) | 1363 |
| AvaII | GGWCC | 4 cut(s) | 755, 874, 2602, 3101 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3423, 3456 |
| BalI | TGGCCA | 1 cut(s) | 1164 |
| BamHI | GGATCC | 2 cut(s) | 1759, 2170 |
| BanI | GGYRCC | 1 cut(s) | 3406 |
| BanII | GRGCYC | 1 cut(s) | 3625 |
| BauI | CACGAG | 1 cut(s) | 2319 |
| BbsI | GAAGAC | 3 cut(s) | 1044, 2370, 2640 |
| Bbv12I | GWGCWC | 3 cut(s) | 920, 1377, 2203 |
| BceAI | ACGGC | 2 cut(s) | 2181, 3329 |
| BciVI | GTATCC | 2 cut(s) | 1107, 2088 |
| BclI | TGATCA | 1 cut(s) | 2698 |
| BcoDI | GTCTC | 5 cut(s) | 962, 1985, 2280, 2959, 3556 |
| BfaI | CTAG | 5 cut(s) | 740, 1266, 2436, 2900, 3693 |
| BfmI | CTRYAG | 3 cut(s) | 496, 1328, 3684 |
| BfuAI | ACCTGC | 2 cut(s) | 37, 1297 |
| BfuI | GTATCC | 2 cut(s) | 1107, 2088 |
| BglII | AGATCT | 2 cut(s) | 86, 2558 |
| BlpI | GCTNAGC | 1 cut(s) | 2202 |
| BmcAI | AGTACT | 3 cut(s) | 1148, 2179, 2355 |
| Bme18I | GGWCC | 4 cut(s) | 755, 874, 2602, 3101 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 880, 1582 |
| BmeT110I | CYCGRG | 1 cut(s) | 1363 |
| BmgT120I | GGNCC | 6 cut(s) | 329, 755, 874, 2194, 2602, 3101 |
| BmiI | GGNNCC | 9 cut(s) | 6, 460, 1464, 1499, 1761, 2172, 3408, 3504, 3624 |
| BmrI | ACTGGG | 3 cut(s) | 31, 1496, 2997 |
| BmsI | GCATC | 9 cut(s) | 41, 667, 793, 1113, 1284, 1445, 1837, 2135, 3208 |
| BmtI | GCTAGC | 1 cut(s) | 3696 |
| BmuI | ACTGGG | 3 cut(s) | 31, 1496, 2997 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2443 |
| BpiI | GAAGAC | 3 cut(s) | 1044, 2370, 2640 |
| BpmI | CTGGAG | 6 cut(s) | 165, 477, 684, 2241, 2259, 2610 |
| Bpu10I | CCTNAGC | 2 cut(s) | 542, 767 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2202 |
| Bpu14I | TTCGAA | 2 cut(s) | 3169, 3347 |
| BpuEI | CTTGAG | 3 cut(s) | 1258, 2036, 2229 |
| Bsa29I | ATCGAT | 1 cut(s) | 442 |
| BsaAI | YACGTR | 1 cut(s) | 1095 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3180 |
| BsaI | GGTCTC | 1 cut(s) | 3556 |
| BsaJI | CCNNGG | 9 cut(s) | 188, 877, 1362, 1658, 1659, 2346, 3104, 3366, 3398 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2932, 2962, 3531, 3561 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 533, 1193, 1220, 1507, 2282, 2378, 2461, 2713, 2834 |
| Bse118I | RCCGGY | 1 cut(s) | 3662 |
| Bse3DI | GCAATG | 1 cut(s) | 1558 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3180 |
| BseCI | ATCGAT | 1 cut(s) | 442 |
| BseDI | CCNNGG | 9 cut(s) | 188, 877, 1362, 1658, 1659, 2346, 3104, 3366, 3398 |
| BseJI | GATNNNNATC | 1 cut(s) | 3180 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 533, 1193, 1220, 1507, 2282, 2378, 2461, 2713, 2834 |
| BseMI | GCAATG | 1 cut(s) | 1558 |
| BseRI | GAGGAG | 3 cut(s) | 164, 2795, 3515 |
| BsgI | GTGCAG | 2 cut(s) | 803, 1163 |
| BshFI | GGCC | 7 cut(s) | 331, 1164, 2159, 2196, 3316, 3638, 3643 |
| BshNI | GGYRCC | 1 cut(s) | 3406 |
| BshVI | ATCGAT | 1 cut(s) | 442 |
| BsiHKAI | GWGCWC | 3 cut(s) | 920, 1377, 2203 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1363 |
| BsiSI | CCGG | 1 cut(s) | 3663 |
| BsiWI | CGTACG | 1 cut(s) | 3382 |
| BslFI | GGGAC | 2 cut(s) | 1367, 2932 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 533, 1193, 1220, 1507, 2282, 2378, 2461, 2713, 2834 |
| BsmAI | GTCTC | 5 cut(s) | 962, 1985, 2280, 2959, 3556 |
| BsmFI | GGGAC | 2 cut(s) | 1367, 2932 |
| BsmI | GAATGC | 3 cut(s) | 214, 1927, 2686 |
| BsnI | GGCC | 7 cut(s) | 331, 1164, 2159, 2196, 3316, 3638, 3643 |
| Bso31I | GGTCTC | 1 cut(s) | 3556 |
| BsoBI | CYCGRG | 1 cut(s) | 1363 |
| Bsp119I | TTCGAA | 2 cut(s) | 3169, 3347 |
| Bsp1286I | GDGCHC | 4 cut(s) | 920, 1377, 2203, 3625 |
| Bsp1407I | TGTACA | 1 cut(s) | 121 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2202 |
| Bsp19I | CCATGG | 1 cut(s) | 3398 |
| BspACI | CCGC | 4 cut(s) | 1960, 2630, 3031, 3635 |
| BspANI | GGCC | 7 cut(s) | 331, 1164, 2159, 2196, 3316, 3638, 3643 |
| BspDI | ATCGAT | 1 cut(s) | 442 |
| BspHI | TCATGA | 1 cut(s) | 2428 |
| BspLI | GGNNCC | 9 cut(s) | 6, 460, 1464, 1499, 1761, 2172, 3408, 3504, 3624 |
| BspMAI | CTGCAG | 2 cut(s) | 500, 1332 |
| BspMI | ACCTGC | 2 cut(s) | 37, 1297 |
| BspOI | GCTAGC | 1 cut(s) | 3696 |
| BspQI | GCTCTTC | 2 cut(s) | 165, 1248 |
| BspT104I | TTCGAA | 2 cut(s) | 3169, 3347 |
| BspT107I | GGYRCC | 1 cut(s) | 3406 |
| BspTNI | GGTCTC | 1 cut(s) | 3556 |
| BsrDI | GCAATG | 1 cut(s) | 1558 |
| BsrFI | RCCGGY | 1 cut(s) | 3662 |
| BsrGI | TGTACA | 1 cut(s) | 121 |
| BssAI | RCCGGY | 1 cut(s) | 3662 |
| BssECI | CCNNGG | 9 cut(s) | 188, 877, 1362, 1658, 1659, 2346, 3104, 3366, 3398 |
| BssSI | CACGAG | 1 cut(s) | 2319 |
| BssT1I | CCWWGG | 2 cut(s) | 2346, 3398 |
| Bst2BI | CACGAG | 1 cut(s) | 2319 |
| Bst6I | CTCTTC | 4 cut(s) | 165, 457, 1248, 2148 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3163 |
| BstAUI | TGTACA | 1 cut(s) | 121 |
| BstBAI | YACGTR | 1 cut(s) | 1095 |
| BstBI | TTCGAA | 2 cut(s) | 3169, 3347 |
| BstC8I | GCNNGC | 7 cut(s) | 71, 1617, 1668, 1962, 2797, 3197, 3694 |
| BstDSI | CCRYGG | 1 cut(s) | 3398 |
| BstHHI | GCGC | 1 cut(s) | 2764 |
| BstMAI | GTCTC | 5 cut(s) | 962, 1985, 2280, 2959, 3556 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1303, 1621, 2116, 3163, 3218, 3610 |
| BstNSI | RCATGY | 4 cut(s) | 73, 644, 3161, 3520 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2443 |
| BstSFI | CTRYAG | 3 cut(s) | 496, 1328, 3684 |
| BstV2I | GAAGAC | 3 cut(s) | 1044, 2370, 2640 |
| BstX2I | RGATCY | 9 cut(s) | 86, 670, 706, 1759, 2170, 2509, 2558, 2824, 3304 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2513 |
| BstYI | RGATCY | 9 cut(s) | 86, 670, 706, 1759, 2170, 2509, 2558, 2824, 3304 |
| Bsu15I | ATCGAT | 1 cut(s) | 442 |
| BsuI | GTATCC | 2 cut(s) | 1107, 2088 |
| BsuRI | GGCC | 7 cut(s) | 331, 1164, 2159, 2196, 3316, 3638, 3643 |
| BsuTUI | ATCGAT | 1 cut(s) | 442 |
| BtgI | CCRYGG | 1 cut(s) | 3398 |
| BtsI | GCAGTG | 3 cut(s) | 1325, 2953, 3620 |
| BtsIMutI | CAGTG | 9 cut(s) | 1215, 1325, 1509, 1528, 2160, 2283, 2953, 2985, 3620 |
| BveI | ACCTGC | 2 cut(s) | 37, 1297 |
| Cac8I | GCNNGC | 7 cut(s) | 71, 1617, 1668, 1962, 2797, 3197, 3694 |
| CaiI | CAGNNNCTG | 1 cut(s) | 284 |
| CciI | TCATGA | 1 cut(s) | 2428 |
| CfoI | GCGC | 1 cut(s) | 2764 |
| Cfr10I | RCCGGY | 1 cut(s) | 3662 |
| Cfr13I | GGNCC | 6 cut(s) | 329, 755, 874, 2194, 2602, 3101 |
| ClaI | ATCGAT | 1 cut(s) | 442 |
| CseI | GACGC | 2 cut(s) | 375, 2448 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1959, 1994, 3054, 3089 |
| DraIII | CACNNNGTG | 1 cut(s) | 826 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1822 |
| DriI | GACNNNNNGTC | 2 cut(s) | 880, 1582 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1822 |
| EaeI | YGGCCR | 3 cut(s) | 1162, 3314, 3636 |
| Eam1104I | CTCTTC | 4 cut(s) | 165, 457, 1248, 2148 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 880, 1582 |
| EarI | CTCTTC | 4 cut(s) | 165, 457, 1248, 2148 |
| Eco130I | CCWWGG | 2 cut(s) | 2346, 3398 |
| Eco24I | GRGCYC | 1 cut(s) | 3625 |
| Eco31I | GGTCTC | 1 cut(s) | 3556 |
| Eco32I | GATATC | 1 cut(s) | 2848 |
| Eco47I | GGWCC | 4 cut(s) | 755, 874, 2602, 3101 |
| Eco57I | CTGAAG | 3 cut(s) | 1865, 2382, 2912 |
| Eco88I | CYCGRG | 1 cut(s) | 1363 |
| EcoRI | GAATTC | 2 cut(s) | 20, 1653 |
| EcoRV | GATATC | 1 cut(s) | 2848 |
| EcoT14I | CCWWGG | 2 cut(s) | 2346, 3398 |
| EcoT22I | ATGCAT | 3 cut(s) | 75, 1128, 1558 |
| EcoT38I | GRGCYC | 1 cut(s) | 3625 |
| ErhI | CCWWGG | 2 cut(s) | 2346, 3398 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2966, 2998 |
| FaqI | GGGAC | 2 cut(s) | 1367, 2932 |
| FauI | CCCGC | 2 cut(s) | 1953, 3024 |
| FauNDI | CATATG | 1 cut(s) | 3508 |
| FbaI | TGATCA | 1 cut(s) | 2698 |
| FblI | GTMKAC | 2 cut(s) | 1638, 1826 |
| FriOI | GRGCYC | 1 cut(s) | 3625 |
| FspBI | CTAG | 5 cut(s) | 740, 1266, 2436, 2900, 3693 |
| GlaI | GCGC | 1 cut(s) | 2763 |
| GsuI | CTGGAG | 6 cut(s) | 165, 477, 684, 2241, 2259, 2610 |
| HaeIII | GGCC | 7 cut(s) | 331, 1164, 2159, 2196, 3316, 3638, 3643 |
| HapII | CCGG | 1 cut(s) | 3663 |
| HgaI | GACGC | 2 cut(s) | 375, 2448 |
| HhaI | GCGC | 1 cut(s) | 2764 |
| Hin6I | GCGC | 1 cut(s) | 2762 |
| HinP1I | GCGC | 1 cut(s) | 2762 |
| HincII | GTYRAC | 1 cut(s) | 1780 |
| HindII | GTYRAC | 1 cut(s) | 1780 |
| HindIII | AAGCTT | 4 cut(s) | 615, 764, 1928, 3053 |
| HpaI | GTTAAC | 1 cut(s) | 1780 |
| HpaII | CCGG | 1 cut(s) | 3663 |
| HphI | GGTGA | 8 cut(s) | 230, 569, 845, 1132, 1321, 1741, 3050, 3344 |
| Hpy166II | GTNNAC | 6 cut(s) | 184, 1325, 1639, 1780, 1827, 3295 |
| Hpy8I | GTNNAC | 6 cut(s) | 184, 1325, 1639, 1780, 1827, 3295 |
| Hpy99I | CGWCG | 2 cut(s) | 704, 3195 |
| HpyCH4IV | ACGT | 3 cut(s) | 1094, 1315, 3392 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1303, 1621, 2116, 3163, 3218, 3610 |
| HpySE526I | ACGT | 3 cut(s) | 1094, 1315, 3392 |
| HspAI | GCGC | 1 cut(s) | 2762 |
| Ksp22I | TGATCA | 1 cut(s) | 2698 |
| KspAI | GTTAAC | 1 cut(s) | 1780 |
| LguI | GCTCTTC | 2 cut(s) | 165, 1248 |
| LweI | GCATC | 9 cut(s) | 41, 667, 793, 1113, 1284, 1445, 1837, 2135, 3208 |
| MaeI | CTAG | 5 cut(s) | 740, 1266, 2436, 2900, 3693 |
| MaeII | ACGT | 3 cut(s) | 1094, 1315, 3392 |
| MaeIII | GTNAC | 6 cut(s) | 530, 1178, 1747, 3124, 3278, 3393 |
| MfeI | CAATTG | 2 cut(s) | 1248, 1485 |
| MflI | RGATCY | 9 cut(s) | 86, 670, 706, 1759, 2170, 2509, 2558, 2824, 3304 |
| MhlI | GDGCHC | 4 cut(s) | 920, 1377, 2203, 3625 |
| MlsI | TGGCCA | 1 cut(s) | 1164 |
| MluNI | TGGCCA | 1 cut(s) | 1164 |
| MlyI | GAGTC | 6 cut(s) | 47, 892, 983, 1644, 2027, 2360 |
| MmeI | TCCRAC | 2 cut(s) | 49, 532 |
| Mox20I | TGGCCA | 1 cut(s) | 1164 |
| Mph1103I | ATGCAT | 3 cut(s) | 75, 1128, 1558 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1353, 1653, 2313, 2637 |
| MscI | TGGCCA | 1 cut(s) | 1164 |
| MslI | CAYNNNNRTG | 5 cut(s) | 444, 1743, 1794, 2088, 3066 |
| Msp20I | TGGCCA | 1 cut(s) | 1164 |
| MspA1I | CMGCKG | 5 cut(s) | 1393, 1619, 2588, 2890, 3689 |
| MspI | CCGG | 1 cut(s) | 3663 |
| MunI | CAATTG | 2 cut(s) | 1248, 1485 |
| Mva1269I | GAATGC | 3 cut(s) | 214, 1927, 2686 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1303, 1621, 2116, 3163, 3218, 3610 |
| NcoI | CCATGG | 1 cut(s) | 3398 |
| NdeI | CATATG | 1 cut(s) | 3508 |
| NheI | GCTAGC | 1 cut(s) | 3692 |
| NlaIV | GGNNCC | 9 cut(s) | 6, 460, 1464, 1499, 1761, 2172, 3408, 3504, 3624 |
| NmuCI | GTSAC | 4 cut(s) | 530, 1178, 1747, 3278 |
| NsiI | ATGCAT | 3 cut(s) | 75, 1128, 1558 |
| NspI | RCATGY | 4 cut(s) | 73, 644, 3161, 3520 |
| NspV | TTCGAA | 2 cut(s) | 3169, 3347 |
| PaeI | GCATGC | 1 cut(s) | 73 |
| PagI | TCATGA | 1 cut(s) | 2428 |
| PaqCI | CACCTGC | 1 cut(s) | 1297 |
| PasI | CCCWGGG | 1 cut(s) | 1659 |
| PciSI | GCTCTTC | 2 cut(s) | 165, 1248 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 571, 2317, 2880, 3196 |
| PctI | GAATGC | 3 cut(s) | 214, 1927, 2686 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1353, 1653, 2313, 2637 |
| Pfl23II | CGTACG | 1 cut(s) | 3382 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2461 |
| PfoI | TCCNGGA | 1 cut(s) | 661 |
| PleI | GAGTC | 6 cut(s) | 47, 892, 983, 1643, 2026, 2360 |
| PpsI | GAGTC | 6 cut(s) | 47, 892, 983, 1643, 2026, 2360 |
| Ppu21I | YACGTR | 1 cut(s) | 1095 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2443 |
| PshBI | ATTAAT | 1 cut(s) | 2579 |
| PsiI | TTATAA | 2 cut(s) | 630, 3717 |
| Psp1406I | AACGTT | 1 cut(s) | 3392 |
| PspLI | CGTACG | 1 cut(s) | 3382 |
| PspN4I | GGNNCC | 9 cut(s) | 6, 460, 1464, 1499, 1761, 2172, 3408, 3504, 3624 |
| PspPI | GGNCC | 6 cut(s) | 329, 755, 874, 2194, 2602, 3101 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1050, 1082, 3103, 3135 |
| PstI | CTGCAG | 2 cut(s) | 500, 1332 |
| PstNI | CAGNNNCTG | 1 cut(s) | 284 |
| PsuI | RGATCY | 9 cut(s) | 86, 670, 706, 1759, 2170, 2509, 2558, 2824, 3304 |
| PvuII | CAGCTG | 5 cut(s) | 1393, 1619, 2588, 2890, 3689 |
| RseI | CAYNNNNRTG | 5 cut(s) | 444, 1743, 1794, 2088, 3066 |
| SapI | GCTCTTC | 2 cut(s) | 165, 1248 |
| Sau96I | GGNCC | 6 cut(s) | 329, 755, 874, 2194, 2602, 3101 |
| ScaI | AGTACT | 3 cut(s) | 1148, 2179, 2355 |
| SchI | GAGTC | 6 cut(s) | 47, 892, 983, 1644, 2027, 2360 |
| SduI | GDGCHC | 4 cut(s) | 920, 1377, 2203, 3625 |
| SfaNI | GCATC | 9 cut(s) | 41, 667, 793, 1113, 1284, 1445, 1837, 2135, 3208 |
| SfcI | CTRYAG | 3 cut(s) | 496, 1328, 3684 |
| SfuI | TTCGAA | 2 cut(s) | 3169, 3347 |
| SinI | GGWCC | 4 cut(s) | 755, 874, 2602, 3101 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 444, 1743, 1794, 2088, 3066 |
| SmlI | CTYRAG | 3 cut(s) | 1273, 2015, 2244 |
| SmoI | CTYRAG | 3 cut(s) | 1273, 2015, 2244 |
| SphI | GCATGC | 1 cut(s) | 73 |
| SsiI | CCGC | 4 cut(s) | 1960, 2630, 3031, 3635 |
| SspI | AATATT | 4 cut(s) | 958, 1027, 3239, 3256 |
| SspMI | CTAG | 5 cut(s) | 740, 1266, 2436, 2900, 3693 |
| StyI | CCWWGG | 2 cut(s) | 2346, 3398 |
| TaiI | ACGT | 3 cut(s) | 1097, 1318, 3395 |
| TaqI | TCGA | 7 cut(s) | 178, 442, 884, 896, 2883, 3169, 3347 |
| TatI | WGTACW | 6 cut(s) | 121, 1146, 1887, 2177, 2353, 3132 |
| TauI | GCSGC | 1 cut(s) | 3638 |
| TscAI | CASTG | 9 cut(s) | 1215, 1332, 1509, 1528, 2167, 2283, 2953, 2992, 3620 |
| TseFI | GTSAC | 4 cut(s) | 530, 1178, 1747, 3278 |
| Tsp45I | GTSAC | 4 cut(s) | 530, 1178, 1747, 3278 |
| TspGWI | ACGGA | 5 cut(s) | 549, 563, 1707, 1784, 2511 |
| TspRI | CASTG | 9 cut(s) | 1215, 1332, 1509, 1528, 2167, 2283, 2953, 2992, 3620 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2461 |
| VpaK11BI | GGWCC | 4 cut(s) | 755, 874, 2602, 3101 |
| VspI | ATTAAT | 1 cut(s) | 2579 |
| XapI | RAATTY | 6 cut(s) | 20, 258, 1285, 1653, 2624, 2788 |
| XceI | RCATGY | 4 cut(s) | 73, 644, 3161, 3520 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 793, 1586 |
| XmiI | GTMKAC | 2 cut(s) | 1638, 1826 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1353, 1653, 2313, 2637 |
| XspI | CTAG | 5 cut(s) | 740, 1266, 2436, 2900, 3693 |
| ZrmI | AGTACT | 3 cut(s) | 1148, 2179, 2355 |
| Zsp2I | ATGCAT | 3 cut(s) | 75, 1128, 1558 |