Rh5BG169300

PB1 domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
17790358 .. 17800290
9933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG169300.1

Sequence Viewer

Length: 3657 bp
ATGGAACCTGGAAGGGAGGAATTCCATCCTGCATCCCAGCAATATATGCCGAACTCTCTGAGCAGCATGCATTCTGATATGAGGTCCCATAACCTTAATACTTCAGATATTAAACCTGTACATAATTATTCAATAACAGGTGAGGAGTTTTCTCTTGAATTTATGCTTGATCGAGTGAACCCCAGGAAGCCTTTGCATCCAAATGCTGTGGGTGATCCAAGTTATGTTGAACTAAAAGGAATGTTAGGAATCAGTCACGGAGGTTTTGAAAGTGGTTCAGATGCTTCAATGGTTGCTATATCTGAAAGAGGTCCAAACCAGTTTGAGAGAAACAGCTCATATTTACATGATGACAGAAATAACTATGGATCAGTTCAATCGGTACCACGAGCTTCTTCAGGCTATGGAACTAGTCGTGTTCATGGGTATGCCTCCTCTGGAGCCTCTGATAGCTCATCAATGAGAATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATTTTACCCCGACCAAGTGATGGGAAACTCAGGTATGTTGGAGGTGATACACGCATTATCCGTATTAGAAAGGACATTACCTGGCAGGAGCTTATACATAAAGCCTTATCAATTTATAACCAATTGCATATAATTAAATATCAGCTTCCAGGAGAGGAGCTTGATGCCTTGGTTTCTGTATCTTGTGATGAGGATCTGCAGAATATGATGGAGGAATGGAACGAACTAGAAGATAAAGAGGGGCCGCAGAAGCTTAGAATGTTTTTTTTCTCCATCAGTGATTTGGAGGATCAGTTTGGTCTGCACAGTGTGGATGGTGACTCTGAGGTTCAGTATGTAGTTGCTGTCAATGGCATGGACCTGGGATCAAGAAAAAACTCGAGCCTACATGGTTTGACAAGCTCAGCAGCTAATCATTTAGATGAGACAAATAGACACAATATTCAGAAGGGAACAAGTCATGTTGCGAAAGACTCAATAGGGATAGGTGCTCCAGTTTTGACTGGCAAAATCATTTCAGCGACAACTGTTCAATCTTCTGAACCTATGCTGCCAAGCTCTTCAAATGCCTATGAAGCTTATCCTCATTTTCAACATGGACAGGTTATGCATTATGGACAAAATGTGCAGTACCCATTGCACAATGGCCATGCCTTTCCAAGTCAATCCCATTTTGGAGACGCTCCTATTTCAGTGCCTCATCCTGGTATTATGAATCAAGGAGGAGGTTCAATTGAAGGGCCGACCAGTGGCTTGAGAGAGCGTAGTTTCGAGATGCCAGTGAAGGAGGTACAACCATTACGTGATGGTTCAGTCCAGCAAGAGAGTGACCCTGAAAAACTTCGCCCCTCAAGGAAAGAGCAATCTGTCCCCAAACCGCTGTATGATGGTAATTTGATGAACTACCCTCCTGTTGAAGAAGCATCAAAAGATGAAAGAAAGTACCAGGAACCTGAAAATGTTGCTTCATCAATTGATTCCGGGAAGTCTATGCTGGTTCACAATCCTAGTGAAGTTGATCATCAGTCCACATCTAACAATGCATTTGCTCCTACTTATGCTGATCCAATGTCCAATGGAATTGATTTGGGGTACCTTGAGCCACCTGTGCAGCCTCAGAGAATCTACTACTCGGAAAGAATTCCCAGGGAGCAGGCAGAGTTGCTGAATCGATCGTCAAAATCTGATGATTCGCATGGTGCTCAGTTTCTCGTATCTCATTCACGCTCTGATATCATTCACCAGGATCCAATTACAGGAGTTAAGAAATTGCATGATCATGCAAACCTTCCTCCCAGGTCTGAACAACAATCCTCCTCAACTGTAAATGTGGATGCTCAAACTGTTGATGATGGACTTGCTCAACTGCAGAAGTACAAAGAGTTTGCTGATTCAATTTGTGAGATGAATGCTAAGCTTTTGCAAGATGCAGATGGTGAATTAAAGCCAGCATTGCCTAAGTCTGTGGATACTAAAGAGATCGTGAACAGGGATAAGATCCTTAAATCTGACCAAGAAACAAACTGCCTCAAAGGTAGCCATAAGAAACTTGTGGTTGATGACATTGCAGAAGCTATATCAGAGTATCCGGCTGTAAGTCAGATACCTTCTGTGAAGCACCATGAGGTTTCTGCATCTAATCATTCAGAGCTTAATCAGGCCGAGGCCACTGGCAAGGATCCAAATACTGCTGACAATATGGGCCGTGCACAAGTTGGTATATCTACTCCAGTGCAGGGAGACATAATTATTGATATCGAAGAACGATTTCCTCGTGATTTCCTGTCTGATATATTCTCCAAGGCAATACTTTCTGAAGGCTCCCCTGATGTTGGTTTACTGCAGAAGGATGGAGCTGGTTTGAGCTTAAATATGGAAAATCTTGATCCTAAGCGCTGGTCATATTTCCAAAAGTTGGCTCAAGAAGGGGCTGATCAACAAGATGTTTCTCTTATGGACCAGGATCTTGGTTTTCCTTCTGCAATTAGAAATGTTGAAGAAGAAGATAGTAAATCTTATCATCGTACACCTTTACCAACAGATGGAGTTCCAATGGCCCATATGAATTCTCAGCCTAATTTTGGAGAAGATATTAGCAAAGAAACTGGACTGACTAAAGCTAATTATGATCATCCGCAACTGAAGGAAACTGAAAGTATGCAGTTTGAGGCCATGATGGAAAACTTACGAGTGCCAGAATCAGATTATGAGGAAGGAAAGTTTGCAAGTAGAACCGCTGGTTTACCTCCTTTAAATCCTTCACTGGGAGAATTTGATATCAGTACCTTGCAGTTGATAAAGAATGAAGATCTAGAACAGATGAAAGAACTGGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAATGGAGGGGGAGTGATGTTGCCATTAAAAGACTAAATAAGAGCTGCTTCACTGGGAGATCATCAGAGCAAGAGAGACTGTCTATAGAGTTCTGGCGGGAAGCTGACATTCTTTCAAAGCTACACCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAAGATGGGCCAGGGGGAACACTAGCTACCGTAACTGAGTACATGGTTGATGGTTCTCTTAGGCATGTCTTACTTCGAAAAGATAGGTATCTTGATCGTCGCAAGCGATTAATAATTGCCATGGATGCAGCATTTGGAATGGAATATTTGCACTCAAAGAATATTGTTCATTTTGACCTGAAGTGTGACAACTTACTTGTGAACCTAAAAGATCCTCAACGGCCAATTTGCAAGGTCGGTGATTTTGGCCTTTCAAAAATTAAGCGAAATACTCTGGTTTCTGGTGGTGTACGTGGCACGTTACCATGGATGGCTCCAGAGTTGCTGAATGGAAGCAGCACTAAGGTCTCCGAAAAGGTGGATATTTTCTCCTTTGGTATTGTCTTATGGGAGATTCTTACTGGAGAGGAGCCGTATGCCAACATGCACTATGGAGCAATTATAGGCGGTATTGTGAACAACACATTGAGACCCACCATTCCAAGTTACTGTGATCCAGAATGGAGAACGCTTATGGAGCAGTGTTGGGCTCCTAATCCTGCTGCCAGGCCATCGTTCACAGAAATTGCTAGTTGCTTACGAGTTATGACAACAGCAGCTAGCCAAACCAAAGCACAGGGTCACAAGGCATCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1218

Amino Acids

135.0

Weight (kDa)

5.47

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 172 - 253 2.9e-17 PB1 domain
PK_Tyr_Ser-Thr PF07714 937 - 1199 1.3e-62 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 937 - 1196 2e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 612
Acc65I GGTACC 2 cut(s) 382, 1587
AccB1I GGYRCC 3 cut(s) 382, 1587, 2834
AccB7I CCANNNNNTGG 3 cut(s) 515, 2410, 2537
AciI CCGC 6 cut(s) 740, 1373, 2630, 2730, 2956, 3465
AcoI YGGCCR 2 cut(s) 1141, 3239
AcsI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
AcuI CTGAAG 5 cut(s) 87, 381, 2331, 2657, 3218
AdeI CACNNNGTG 1 cut(s) 805
AfeI AGCGCT 1 cut(s) 2390
AhlI ACTAGT 1 cut(s) 410
Alw21I GWGCWC 3 cut(s) 988, 1699, 2206
Alw26I GTCTC 6 cut(s) 914, 1167, 2229, 2929, 3370, 3481
Alw44I GTGCAC 1 cut(s) 2202
Ama87I CYCGRG 1 cut(s) 874
Aor51HI AGCGCT 1 cut(s) 2390
ApaLI GTGCAC 1 cut(s) 2202
ApeKI GCWGC 9 cut(s) 63, 902, 1045, 1606, 2904, 3146, 3354, 3560, 3614
ApoI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
AseI ATTAAT 1 cut(s) 3128
Asp700I GAANNNNTTC 3 cut(s) 1335, 1635, 2262
Asp718I GGTACC 2 cut(s) 382, 1587
AspLEI GCGC 1 cut(s) 2391
AspS9I GGNCC 9 cut(s) 84, 311, 737, 853, 1235, 2197, 2452, 2551, 3026
AsuC2I CCSGG 1 cut(s) 1477
AsuHPI GGTGA 7 cut(s) 152, 224, 551, 824, 1727, 1943, 3269
AsuII TTCGAA 1 cut(s) 3094
AsuNHI GCTAGC 1 cut(s) 3617
AvaI CYCGRG 1 cut(s) 874
AvaII GGWCC 4 cut(s) 84, 311, 853, 2452
BaeGI GKGCMC 1 cut(s) 2206
BalI TGGCCA 1 cut(s) 1143
BamHI GGATCC 2 cut(s) 1741, 2173
BanI GGYRCC 3 cut(s) 382, 1587, 2834
BanII GRGCYC 1 cut(s) 3550
BauI CACGAG 2 cut(s) 387, 2268
Bbv12I GWGCWC 3 cut(s) 988, 1699, 2206
BbvI GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BceAI ACGGC 3 cut(s) 2184, 3254, 3415
BciVI GTATCC 2 cut(s) 1957, 2091
BclI TGATCA 4 cut(s) 1513, 1771, 2428, 2623
BcnI CCSGG 1 cut(s) 1477
BcoDI GTCTC 6 cut(s) 914, 1167, 2229, 2929, 3370, 3481
BcuI ACTAGT 1 cut(s) 410
BfaI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
BfmI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
BfoI RGCGCY 1 cut(s) 2392
BfuI GTATCC 2 cut(s) 1957, 2091
BglII AGATCT 1 cut(s) 2803
BlpI GCTNAGC 2 cut(s) 898, 1908
Bme18I GGWCC 4 cut(s) 84, 311, 853, 2452
BmeT110I CYCGRG 1 cut(s) 874
BmgT120I GGNCC 9 cut(s) 84, 311, 737, 853, 1235, 2197, 2452, 2551, 3026
BmrI ACTGGG 3 cut(s) 2768, 2834, 2922
BmtI GCTAGC 1 cut(s) 3621
BmuI ACTGGG 3 cut(s) 2768, 2834, 2922
BpmI CTGGAG 5 cut(s) 459, 972, 2208, 3318, 3441
Bpu10I CCTNAGC 1 cut(s) 2385
Bpu1102I GCTNAGC 2 cut(s) 898, 1908
Bpu14I TTCGAA 1 cut(s) 3094
BpuEI CTTGAG 4 cut(s) 1270, 1330, 1613, 2400
BpuMI CCSGG 1 cut(s) 1477
Bsa29I ATCGAT 1 cut(s) 1666
BsaAI YACGTR 2 cut(s) 1298, 3311
BsaBI GATNNNNATC 2 cut(s) 687, 3105
BsaI GGTCTC 2 cut(s) 3370, 3481
BsaXI ACNNNNNCTCC 4 cut(s) 773, 803, 2857, 2887
Bse3DI GCAATG 3 cut(s) 1130, 1946, 2058
Bse8I GATNNNNATC 2 cut(s) 687, 3105
BseCI ATCGAT 1 cut(s) 1666
BseJI GATNNNNATC 2 cut(s) 687, 3105
BseMI GCAATG 3 cut(s) 1130, 1946, 2058
BseMII CTCAG 8 cut(s) 50, 538, 810, 912, 1625, 1712, 2579, 3045
BseRI GAGGAG 6 cut(s) 158, 424, 665, 1233, 1801, 3440
BseSI GKGCMC 1 cut(s) 2206
BseXI GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BseYI CCCAGC 1 cut(s) 36
BsgI GTGCAG 4 cut(s) 782, 1142, 1625, 2249
Bsh1285I CGRYCG 1 cut(s) 1670
BshNI GGYRCC 3 cut(s) 382, 1587, 2834
BshVI ATCGAT 1 cut(s) 1666
BsiEI CGRYCG 1 cut(s) 1670
BsiHKAI GWGCWC 3 cut(s) 988, 1699, 2206
BsiHKCI CYCGRG 1 cut(s) 874
BsiSI CCGG 2 cut(s) 1476, 2084
BslFI GGGAC 3 cut(s) 70, 1349, 2857
BsmAI GTCTC 6 cut(s) 914, 1167, 2229, 2929, 3370, 3481
BsmBI CGTCTC 1 cut(s) 1167
BsmFI GGGAC 3 cut(s) 70, 1349, 2857
BsmI GAATGC 2 cut(s) 70, 1909
Bso31I GGTCTC 2 cut(s) 3370, 3481
BsoBI CYCGRG 1 cut(s) 874
Bsp119I TTCGAA 1 cut(s) 3094
Bsp1286I GDGCHC 4 cut(s) 988, 1699, 2206, 3550
Bsp1407I TGTACA 1 cut(s) 118
Bsp1720I GCTNAGC 2 cut(s) 898, 1908
Bsp19I CCATGG 2 cut(s) 3138, 3323
BspACI CCGC 6 cut(s) 740, 1373, 2630, 2730, 2956, 3465
BspCNI CTCAG 8 cut(s) 51, 537, 811, 911, 1624, 1711, 2578, 3046
BspDI ATCGAT 1 cut(s) 1666
BspMAI CTGCAG 3 cut(s) 696, 1866, 2340
BspOI GCTAGC 1 cut(s) 3621
BspQI GCTCTTC 1 cut(s) 1060
BspT104I TTCGAA 1 cut(s) 3094
BspT107I GGYRCC 3 cut(s) 382, 1587, 2834
BspTNI GGTCTC 2 cut(s) 3370, 3481
BsrDI GCAATG 3 cut(s) 1130, 1946, 2058
BsrGI TGTACA 1 cut(s) 118
BssSI CACGAG 2 cut(s) 387, 2268
BssT1I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Bst2BI CACGAG 2 cut(s) 387, 2268
Bst4CI ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
Bst6I CTCTTC 1 cut(s) 1060
BstAPI GCANNNNNTGC 1 cut(s) 46
BstAUI TGTACA 1 cut(s) 118
BstBAI YACGTR 2 cut(s) 1298, 3311
BstBI TTCGAA 1 cut(s) 3094
BstC8I GCNNGC 5 cut(s) 68, 1650, 1944, 3122, 3619
BstDSI CCRYGG 2 cut(s) 3138, 3323
BstH2I RGCGCY 1 cut(s) 2392
BstHHI GCGC 1 cut(s) 2391
BstMAI GTCTC 6 cut(s) 914, 1167, 2229, 2929, 3370, 3481
BstMCI CGRYCG 1 cut(s) 1670
BstMWI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
BstNSI RCATGY 3 cut(s) 70, 3086, 3445
BstSFI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
BstSLI GKGCMC 1 cut(s) 2206
BstV1I GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BstX2I RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
BstXI CCANNNNNNTGG 1 cut(s) 2462
BstYI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
Bsu15I ATCGAT 1 cut(s) 1666
BsuI GTATCC 2 cut(s) 1957, 2091
BsuTUI ATCGAT 1 cut(s) 1666
BtgI CCRYGG 2 cut(s) 3138, 3323
BtsI GCAGTG 1 cut(s) 3545
Cac8I GCNNGC 5 cut(s) 68, 1650, 1944, 3122, 3619
CfoI GCGC 1 cut(s) 2391
Cfr13I GGNCC 9 cut(s) 84, 311, 737, 853, 1235, 2197, 2452, 2551, 3026
ClaI ATCGAT 1 cut(s) 1666
CseI GACGC 1 cut(s) 1184
CspCI CAANNNNNGTGG 4 cut(s) 189, 224, 2979, 3014
DraI TTTAAA 1 cut(s) 2748
DraIII CACNNNGTG 1 cut(s) 805
EaeI YGGCCR 2 cut(s) 1141, 3239
Eam1104I CTCTTC 1 cut(s) 1060
EarI CTCTTC 1 cut(s) 1060
Eco130I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Eco24I GRGCYC 1 cut(s) 3550
Eco31I GGTCTC 2 cut(s) 3370, 3481
Eco32I GATATC 3 cut(s) 1729, 2251, 2773
Eco47I GGWCC 4 cut(s) 84, 311, 853, 2452
Eco47III AGCGCT 1 cut(s) 2390
Eco57I CTGAAG 5 cut(s) 87, 381, 2331, 2657, 3218
Eco88I CYCGRG 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 84
EcoRI GAATTC 3 cut(s) 20, 1635, 2560
EcoRV GATATC 3 cut(s) 1729, 2251, 2773
EcoT14I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
EcoT22I ATGCAT 3 cut(s) 72, 1107, 1540
EcoT38I GRGCYC 1 cut(s) 3550
ErhI CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Esp3I CGTCTC 1 cut(s) 1167
FalI AAGNNNNNCTT 2 cut(s) 2891, 2923
FaqI GGGAC 3 cut(s) 70, 1349, 2857
FauI CCCGC 1 cut(s) 2949
FauNDI CATATG 1 cut(s) 2556
FbaI TGATCA 4 cut(s) 1513, 1771, 2428, 2623
FriOI GRGCYC 1 cut(s) 3550
FspBI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
GlaI GCGC 1 cut(s) 2390
GsaI CCCAGC 1 cut(s) 40
GsuI CTGGAG 5 cut(s) 459, 972, 2208, 3318, 3441
HaeII RGCGCY 1 cut(s) 2392
HapII CCGG 2 cut(s) 1476, 2084
HgaI GACGC 1 cut(s) 1184
HhaI GCGC 1 cut(s) 2391
Hin6I GCGC 1 cut(s) 2389
HinP1I GCGC 1 cut(s) 2389
HindIII AAGCTT 3 cut(s) 746, 1071, 1910
HpaII CCGG 2 cut(s) 1476, 2084
HphI GGTGA 7 cut(s) 152, 224, 551, 824, 1727, 1943, 3269
Hpy99I CGWCG 1 cut(s) 3120
HpyCH4III ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
HpyCH4IV ACGT 3 cut(s) 1297, 3310, 3317
HpyF10VI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
HpySE526I ACGT 3 cut(s) 1297, 3310, 3317
HspAI GCGC 1 cut(s) 2389
KpnI GGTACC 2 cut(s) 386, 1591
Ksp22I TGATCA 4 cut(s) 1513, 1771, 2428, 2623
LguI GCTCTTC 1 cut(s) 1060
Lsp1109I GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
MaeI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
MaeII ACGT 3 cut(s) 1297, 3310, 3317
MaeIII GTNAC 8 cut(s) 254, 812, 1322, 3049, 3203, 3318, 3503, 3638
MfeI CAATTG 3 cut(s) 617, 1227, 1467
MflI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
MhlI GDGCHC 4 cut(s) 988, 1699, 2206, 3550
MlsI TGGCCA 1 cut(s) 1143
MluNI TGGCCA 1 cut(s) 1143
MlyI GAGTC 2 cut(s) 809, 962
MmeI TCCRAC 1 cut(s) 514
Mox20I TGGCCA 1 cut(s) 1143
Mph1103I ATGCAT 3 cut(s) 72, 1107, 1540
MroXI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
MscI TGGCCA 1 cut(s) 1143
MslI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
Msp20I TGGCCA 1 cut(s) 1143
MspA1I CMGCKG 2 cut(s) 1375, 2732
MspI CCGG 2 cut(s) 1476, 2084
MunI CAATTG 3 cut(s) 617, 1227, 1467
Mva1269I GAATGC 2 cut(s) 70, 1909
MwoI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
NciI CCSGG 1 cut(s) 1477
NcoI CCATGG 2 cut(s) 3138, 3323
NdeI CATATG 1 cut(s) 2556
NheI GCTAGC 1 cut(s) 3617
NmeAIII GCCGAG 1 cut(s) 2182
NmuCI GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
NsiI ATGCAT 3 cut(s) 72, 1107, 1540
NspI RCATGY 3 cut(s) 70, 3086, 3445
NspV TTCGAA 1 cut(s) 3094
PaeI GCATGC 1 cut(s) 70
PaeR7I CTCGAG 1 cut(s) 874
PasI CCCWGGG 1 cut(s) 1641
PciSI GCTCTTC 1 cut(s) 1060
PcsI WCGNNNNNNNCGW 3 cut(s) 553, 2266, 3121
PctI GAATGC 2 cut(s) 70, 1909
PdmI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
PfeI GAWTC 9 cut(s) 249, 1210, 1472, 1617, 1663, 1685, 1886, 2693, 3412
PflMI CCANNNNNTGG 3 cut(s) 515, 2410, 2537
PfoI TCCNGGA 2 cut(s) 643, 1475
Ple19I CGATCG 1 cut(s) 1670
PleI GAGTC 2 cut(s) 809, 962
PpsI GAGTC 2 cut(s) 809, 962
Ppu21I YACGTR 2 cut(s) 1298, 3311
PpuMI RGGWCCY 1 cut(s) 84
PshBI ATTAAT 1 cut(s) 3128
PsiI TTATAA 1 cut(s) 612
Psp5II RGGWCCY 1 cut(s) 84
PspFI CCCAGC 1 cut(s) 36
PspPI GGNCC 9 cut(s) 84, 311, 737, 853, 1235, 2197, 2452, 2551, 3026
PspPPI RGGWCCY 1 cut(s) 84
PspXI VCTCGAGB 1 cut(s) 874
PsrI GAACNNNNNNTAC 2 cut(s) 3028, 3060
PstI CTGCAG 3 cut(s) 696, 1866, 2340
PsuI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
PvuI CGATCG 1 cut(s) 1670
RseI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
SapI GCTCTTC 1 cut(s) 1060
Sau96I GGNCC 9 cut(s) 84, 311, 737, 853, 1235, 2197, 2452, 2551, 3026
SchI GAGTC 2 cut(s) 809, 962
SduI GDGCHC 4 cut(s) 988, 1699, 2206, 3550
SfcI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
Sfr274I CTCGAG 1 cut(s) 874
SfuI TTCGAA 1 cut(s) 3094
SinI GGWCC 4 cut(s) 84, 311, 853, 2452
SlaI CTCGAG 1 cut(s) 874
SmiMI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
SmlI CTYRAG 5 cut(s) 874, 1249, 1345, 1592, 2415
SmoI CTYRAG 5 cut(s) 874, 1249, 1345, 1592, 2415
SpeI ACTAGT 1 cut(s) 410
SphI GCATGC 1 cut(s) 70
SsiI CCGC 6 cut(s) 740, 1373, 2630, 2730, 2956, 3465
SspI AATATT 3 cut(s) 937, 3164, 3181
SspMI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
StyI CCWWGG 4 cut(s) 663, 2295, 3138, 3323
TaaI ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
TaiI ACGT 3 cut(s) 1300, 3313, 3320
TaqI TCGA 6 cut(s) 172, 875, 1266, 1666, 2253, 3094
TatI WGTACW 3 cut(s) 118, 1869, 3057
TauI GCSGC 1 cut(s) 742
TfiI GAWTC 9 cut(s) 249, 1210, 1472, 1617, 1663, 1685, 1886, 2693, 3412
TseFI GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
TseI GCWGC 9 cut(s) 63, 902, 1045, 1606, 2904, 3146, 3354, 3560, 3614
Tsp45I GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
TspGWI ACGGA 2 cut(s) 273, 545
Van91I CCANNNNNTGG 3 cut(s) 515, 2410, 2537
VneI GTGCAC 1 cut(s) 2202
VpaK11BI GGWCC 4 cut(s) 84, 311, 853, 2452
VspI ATTAAT 1 cut(s) 3128
XapI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
XbaI TCTAGA 1 cut(s) 2806
XceI RCATGY 3 cut(s) 70, 3086, 3445
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XhoI CTCGAG 1 cut(s) 874
XmnI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
XspI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
Zsp2I ATGCAT 3 cut(s) 72, 1107, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.