Prupe.4G152000_v2.0.a1

callose synthase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
8690559 .. 8705800
15242 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G152000.1

Sequence Viewer

Length: 5865 bp
ATGTCTGAGATTGTGGTTGCAGAGCCTATCTATGAAGATGACACACCAGAGCCGAAAAGCCCCATCACAAGGTCCATTACCATGGGCACTGGAAGTGAACACAATCATGTTCCTGAGCCATTTGAGAGCGAAAGATTGCCTGCCTGTTTGGCTTCTGAAATCCAGAGGTTTCTTCGTGTTGCAAATTTGATCGAAAGCGACGAGCCTCGTATTGCTTACCTGTGCCGCTTTCATGCCTTTGAAATAGCACATAATATGGACCGCAATTCGAGTGGCCGGGGTGTTCGACAATTCAAAACTTCCCTTCTCCAGCGACTTGAACAGGATGAAGAAACTACAATAACGAAACGAAAGGAAATGAGTGATATACGTGAACTGAGGCGTGTTTATCATGCTTACAAAGAGTACATCATTAAACATGATGGAGCATTTCATTTAGAAAATAGTCACAGGGAGAAGTTGATAGATGCACGTAGAATTGGTTCTGTATTGTTTGAAGTTCTAAAGACAGTTTCAAATACAACCGGTCCTCAGGCGCTTGCTAATAGAGGTGGCGTCCAGACAAAATCTAATGATCTCTTTGTGCCATATAATATTCTACCACTTGACCCTGGAGATAGTCAGCAAGCAATCATGCAACTACCTGAGATTAAAGCTGCAGTAGCAGCTATTCGCAATATTCGTGGTATACCTTCGGCCAATGATTTTCAAAAACATGGGGACTTTATTGATTTGTTTGATTTTCTTCAGTACTGCTTTGGATTTCAGGAGGGAAATGTGGCCAATCAGAGGGAACATCTACTTCTACTCCTTGCTAACATTCACATACGGAAAACCCATAAGCAGACATCAGTCTTAAAGTTAGGAGATGGTTCAGTGGATGAGTTATTACGGAAATTTTTTAAAAATTATACAAACTGGTGCAAATTTTTGGGTAGGAAAAGCAACATCTGGTTGCCTTATGTGAAACAAGAAGCCCAACAGTATAAACTTTTGTATCTAGGGCTTTACCTTCTTATATGGGGGGAGGCTGCAAATTTGCGATTCATGCCAGAGTGTCTGTGTTATATATTTCACCATATGGCATATGAATTACATGGTATGCTAACTGGCGCTGTTAGCTTGACATCATGGGAGAAAGTCATGCCAGCATATGGAGGCCAGTCTGAGTCTTTCCTTAACAATGTGGTTACCCCTATATACACGGTTATAAAAAAGGAAGCCAAAAAAAGCAAAAGTGGGACAGCTGACCATTCCACATGGAGAAACTATGATGATCTGAATGAGTATTTTTGGTCTCCTGATTGTTTCCAAATAGGTTGGCCCATGCGTCTAGACCATGATTTTTTCTGCATACCGTCTTCAAAGAAACCCAAGGCTAAGAAGGCTTCAGCATCCACTGGTTCTGTAGAAGAAAGAAGGAAGGAAGATGGGGAGGAAGATGAAGTGGGGGCAACTAAAGAAGAAGATCGTGAACCAAAATGGTTAGGGAAAACAAATTTTGTAGAAGTCCGTTCGTTTTGGCAAATTTTCAGAAGCTTTGACAGAATGTGGAGCTTTTTTATTCTTTCACTTCAGGCATTGATCATTATGGCATGCCATGAATTGGAATCTCCACTTCAACTGTTTGACAAGGTTATACTTGAGGACGTCATGAGCGTATTCATTACATCTGCATTTCTTAAACTCATACGAGCAATACTCGACATTGGCTTTACATGGAAAGCCAGACAAACGATGGAGTTCTCTGAAAAATTAAAACATGTTATGAAGCTGGTTGTTGCAGTAATATGGACTATAATTCTTCCTGTATATTATGCTAATTCTAGAAGAAAATATACCTGTTATCCCACACGATATGAAAGCTGGCTTCAAGAGTGGTGTTTCTCTTCCTATATGGTTGCAGTTGCAATTTATTTGACAACTAATGCAGTTGAGATGGTGTTATTTTTGGTTCCTTCTATTCGCAAATACATCGAGATCTCAAATCACCGGATATGCACCATTTTGTCTTGGTGGACACAGCCTGGATTATATATTGGGCGTGGGATGCAAGAAAGCCAACTTTCAGTGTTGAAGTATACATTGTTTTGGGTACTTGTACTACTGAGCAAATTTTCTTTCAGCTACTACTTTGAGATAAAACCACTCATAGAACCGACAAAACAGATCATGAAAATTGGTGTGAAAAAGTATGAGTGGCATGAGCTTTTTCCAAAAGTTCAGAGTAATGCTGGTGCAATTGTTGCTGTATGGGCTCCAATAATAGTTGTGTATTTTATGGACACTCAGATATGGTATTCTGTTTTCTGCACACTCTTTGGTGGAGTCTATGGCATATTGCATCACCTTGGTGAGATTCGGACTTTAGGAATGTTGAGAAGTCGGTTTCACAGTTTGCCTTCTGCATTCAATATTTCCCTTATCCCACCCTCATCAAGAAATGGTCAAAAGAGAAAAACAGGCTTCTTTCACAATAAATTCATAAAGGTGTCAAAGACTGAAAAAAATGGTGTTGCCAAGTTTGTATTAGTGTGGAACCAAATTATCAATAATTTCCGAACGGAGGACTTGATAAACAACAGGGAGTTGGATTTGATGACAATGCCTATGTCATCAGAATTATTTTCTGGCATAGTCCGTTGGCCTGTTTTCCTTCTTGCAAATAAGTTTTCAACAGCATTGAGTATTGCAAAGGATTTCGTGGGGAAGGATGAGATTCTTGTCAGAAAAATTAAAAAAGATGAGTACATGTACTGTGCTGTGAAGGAGTGCTACGAATCATTGAAGTACATCCTTGAAATCCTCGTTGTTGGTGATCTTGAAAAAAGGATTGTATCTGCCATGTTTACTGAAATTGAAGAAAGCATTGCAAGATCAACTCTTCTTCAGGATTTTAGGATGATTGAACTTCCACTTCTTCTAGCCAAATGTATTGAGTTAATGGAACTTCTGGTTGAGGGAAATGAAGACCATCATGGTAAAGTTATCAAAATTCTCCAAGATATATTTGAGCTTGTAACCAATGATATGATGACTAGTGGCTTCAGGATATTGGAGTTGCTATACTCATTCCAACAGATCGACATGGACTTTGTTGATTTTAATAGACGCATTGAACCAGAACTTTTTGGGTCTGCTGATAGCAAGAGTTCCATCCATTTCCCTTTGCCAGACAGTGCTGCTTTGAATGAGCAGATCAAGCGTTTTCATCTATTGCTTACTGTCAAAGATACAGCAATGGACATTCCAACGAACTTAGAGGCTCGGAGACGCATATCATTTTTTGCCACTTCTCTCTTTATGAATATGCCCAGTGCACCCAAATTGTGCAATATGCTGCCATTCTGTGTTATGACACCACACTACATGGAGGATATTAATTTTTCAATGAAGGAGCTTCATTCAAGCCAACGAGAGGTCTCCATCATCTTTTACATGCAAAAAATATTTCCAGATGAGTGGAAAAACTTTTTGGAGCGCATGGGTTGTGAAAACTTGGATGGATTGAAAGATAAAGGCAAGGAGGAAGATCTTAGAAATTGGGCTTCTTACCGGGGCCAAACGCTAAGCAGAACAGTTAGAGGAATGATGTACTATAGAGAAGCCTTAAAATTACAAGCATTCCTTGATGTGGCTGAAGATGAAGATATTCTTGAAGGTTATGATGCTGTTGAAAGTAGAAATCGTGTGTTATCTGCCCAGCTAGATGCAATAGCAGACATGAAATTTACATATGTACTTTCTTGTCAATTGTTTGGATCACAAAAAGCTTCTGGAGATCCACATGCACAAGACATTATTGACTTGATGATAAGATACCCATCTCTGCGTGTTGCTTACGTTGAGGAGAAAGAAGAGATGGTGGAAAACAGGCACAGGCCTCGCAAAGTTTATTCTTCTGTATTGGTTAAAGCTGTCAATGGTTTTGATCAGGAAATATATCGCATAAAGCTTCCTGGTCCACCAACTATTGGAGAAGGGAAGCCCGAAAACCAGAATTATGGAATAATCTTCACTCGTGGTGAAGCTCTCCAAACCATTGATATGAATCAAGATAGTTATTTGGAAGAAGCACTCAAAATGAGAAATCTTCTGCAAGAATTTCTTCAGAACCAAGGACGGAGACCTCCTGCACTACTTGGTTTGAGGGAACACGTATTTACAGGAAGTGTTTCTTCTCTTGCATGGTTCATGTCTTATCAAGAGACCAGCTTCGTCACCATTGGTCAAAGGCTTCTTGCTAATCCACTCAGGGTACGGTTCCATTATGGACATCCGGATGTATTTGACAGGCTATTTCACATCACAAGAGGTGGCATAAGCAAAGCATCAAAAACAATTAACCTGAGCGAGGATGTTTTTGCTGGATTTAACTGTACCTTACGACGGGGATGTATAACTTATCATGAGTACATGCAAGTTGGCAAGGGGCGTGACGTAAGTCTAAACCAGATATCGAAGTTTGAAGCTAAGGTTGCTAATGGAAACAGTGAACAAACTCTAAGCCGTGATATATACCACCTTGGACGTCAGTTTGACTTCTTCCGGATGCTATCTTGTTATTTCACAACCATTGGGTTTTACTTTAGTAGCCTGATGTCAATTATTGGAATCTACGTGTTCCTCTACGGACAGTTATACCTTGTCCTTAGTGGCTTGGAAAAAGCGCTTATAATTGAAGCTAGACTGCAGAACATACAATCCTTGGAAACAGCTCTTGCCTCACAGTCATTTATACAGCTTGGACTACTAACAGGATTACCAATGGTGATGGAAATTGGACTTGAGAAGGGGTTCCTTAATGCACTTAAAGATTTTGTCCTGATGCAATTGCAGCTGGCTTCTGTTTTCTTCACTTTCTCCTTTGGCACAAAAATTCATTATTATGGCCGAACAATTCTGCATGGGGGTGCTAAATACAGACCCACTGGGCGTAAGGTCGTTGTGTTTCATGCTAGCTTCACTGAGAACTACAGGTTATATTCAAGAAGCCACTTTGTGAAAGGATTCGAATTATTGCTCCTGTTGACTGTTTATGACTTGTTTAGGCGGTCCTATCAGAGCAACATGGCATATGTATTGATCACTTATTCAATTTGGTTCATGTCAATCACTTGGTTGTTCGCTCCATTTCTTTTTAATCCCTCTGGATTCAGTTGGGAGAAGATAGTAGATGACTGGAAAGATTGGAACAAGTGGATCAGACAACAGGGTGGCATTGGAGTTCAACAAGATAAAAGTTGGCAGTCTTGGTGGATAGATGAGCAAGCCCATCTTCGTCGTTCAGGGATGACTTCTAGGGTGTTTGAAATTCTCCTTTCCGTTCGATTTTTCCTATATCAGTATGGTCTGGTCTACCACCTTGACATCTCCCAAAACAGCAGGAATTTTCTGGTTTATTTGCTTTCATGGATGGTGATCCTCGCAGTTTTCCTTATAGTAAAGGCAGTGAACCTTGGAAGGCAACAGTTCAGTGCTAGATATCACCTAGTGTTTAGGCTATTTAAAGCCTTCCTCTTCTTGGGTGTTCTTTCTGTCATACTTGCTCTCTATTTCGTATGTAAATTATCCTGGAAGGACATACTTGTCTGCTCTCTAGCATTTTTCCCAACAGGGTGGGGTTTGATATTGTTTGCACAAGCTGTGAGGCCCCTGATAGAGAATACTGGATTGTGGGAATTCACCAGAGTACTTGCTAAAACATACGATTACGGAATGGGAGTTGCTCTCTTTGCACCTATTGCTGTCTTTTCCTGGCTTCCGATTTTATCAGCATTCCAGACTCGTTTCCTGTTCAACGAGGCCTTCAATAGGCACTTACAAATCCAACCAATTCTTGCAGGGAAGAAGAAGAACAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1955

Amino Acids

226.5

Weight (kDa)

8.72

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016003)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14570 AT3G14570 AT3G14570
fragaria_vesca FvH4_3g16960
malus_domestica MD11G1276200.v1.1
prunus_persica Prupe.4G152000_v2.0.a1
pyrus_communis pycom11g24450
rosa_chinensis RchiOBHm_Chr5g0028271
rosa_laevigata RLG00000033078
rosa_multiflora Rmu_sc0001571.1_g000003
rosa_roxburghii Rroxscaffold_1G00051450
rosa_rugosa Rorug05G0105400
rosa_samantha Rh5AG198900 Rh5DG199100
rosa_wichuraiana Rw5G018140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1211, 4676
AasI GACNNNNNNGTC 1 cut(s) 5588
AatII GACGTC 2 cut(s) 1653, 4534
AccB7I CCANNNNNTGG 3 cut(s) 1154, 1606, 3974
AccI GTMKAC 3 cut(s) 688, 2081, 5358
AccIII TCCGGA 2 cut(s) 4279, 4548
AciI CCGC 3 cut(s) 226, 262, 5053
AclWI GGATC 4 cut(s) 3769, 3776, 5210, 5416
AcoI YGGCCR 4 cut(s) 274, 696, 780, 4891
AcuI CTGAAG 7 cut(s) 731, 1374, 1559, 2873, 3031, 3660, 4094
AcyI GRCGYC 3 cut(s) 555, 1650, 4531
AdeI CACNNNGTG 2 cut(s) 5002, 5494
AfeI AGCGCT 1 cut(s) 4671
AflIII ACRYGT 4 cut(s) 1762, 2751, 4156, 4620
AgeI ACCGGT 1 cut(s) 524
AhlI ACTAGT 1 cut(s) 3038
AjnI CCWGG 5 cut(s) 610, 2026, 3958, 5573, 5756
AjuI GAANNNNNNNTTGG 2 cut(s) 3458, 3490
AleI CACNNNNGTG 1 cut(s) 2352
AloI GAACNNNNNNTCC 2 cut(s) 4688, 4720
Alw21I GWGCWC 1 cut(s) 3322
Alw26I GTCTC 5 cut(s) 1302, 3265, 3427, 4120, 4202
Alw44I GTGCAC 1 cut(s) 3318
AlwI GGATC 4 cut(s) 3769, 3776, 5210, 5416
Aor13HI TCCGGA 2 cut(s) 4279, 4548
Aor51HI AGCGCT 1 cut(s) 4671
ApaLI GTGCAC 1 cut(s) 3318
ApeKI GCWGC 6 cut(s) 656, 665, 1031, 3182, 3340, 4837
ArsI GACNNNNNNTTYG 2 cut(s) 3077, 3109
AseI ATTAAT 1 cut(s) 3381
AsiGI ACCGGT 1 cut(s) 524
Asp700I GAANNNNTTC 6 cut(s) 481, 3651, 4107, 4174, 4796, 5009
AspLEI GCGC 4 cut(s) 538, 1115, 3483, 4672
AspS9I GGNCC 8 cut(s) 72, 259, 527, 1323, 3559, 3962, 5055, 5652
AsuC2I CCSGG 2 cut(s) 278, 3557
AsuII TTCGAA 1 cut(s) 5013
AsuNHI GCTAGC 1 cut(s) 4958
AvaII GGWCC 5 cut(s) 72, 259, 527, 3962, 5055
AxyI CCTNAGG 1 cut(s) 531
BaeGI GKGCMC 2 cut(s) 89, 3322
BaeI ACNNNNGTAYC 2 cut(s) 980, 1013
BalI TGGCCA 1 cut(s) 782
BanII GRGCYC 1 cut(s) 2260
BarI GAAGNNNNNNTAC 4 cut(s) 1822, 1854, 2759, 2791
BauI CACGAG 1 cut(s) 4020
BbsI GAAGAC 2 cut(s) 1353, 2976
Bbv12I GWGCWC 1 cut(s) 3322
BbvI GCAGC 6 cut(s) 643, 677, 1018, 3169, 3327, 4849
BceAI ACGGC 1 cut(s) 4494
BcgI CGANNNNNNTGC 4 cut(s) 1957, 1991, 3866, 3900
BciT130I CCWGG 5 cut(s) 612, 2028, 3960, 5575, 5758
BclI TGATCA 3 cut(s) 1584, 3931, 5085
BcnI CCSGG 2 cut(s) 278, 3557
BcoDI GTCTC 5 cut(s) 1302, 3265, 3427, 4120, 4202
BcuI ACTAGT 1 cut(s) 3038
BfmI CTRYAG 5 cut(s) 657, 1407, 3598, 4691, 4975
BfoI RGCGCY 3 cut(s) 539, 1116, 4673
BglI GCCNNNNNGGC 1 cut(s) 149
BglII AGATCT 2 cut(s) 1980, 3532
BisI GCNGC 7 cut(s) 226, 657, 666, 1032, 3183, 3341, 4838
BlpI GCTNAGC 1 cut(s) 3569
BlsI GCNGC 7 cut(s) 227, 658, 667, 1033, 3184, 3342, 4839
BmcAI AGTACT 2 cut(s) 752, 5694
Bme1390I CCNGG 7 cut(s) 278, 612, 2028, 3557, 3960, 5575, 5758
Bme18I GGWCC 5 cut(s) 72, 259, 527, 3962, 5055
BmgT120I GGNCC 8 cut(s) 72, 259, 527, 1323, 3559, 3962, 5055, 5652
BmiI GGNNCC 7 cut(s) 1956, 2259, 2540, 3560, 4265, 4799, 5654
BmrFI CCNGG 7 cut(s) 278, 612, 2028, 3557, 3960, 5575, 5758
BmrI ACTGGG 2 cut(s) 3309, 4941
BmsI GCATC 9 cut(s) 457, 1403, 2040, 2353, 3658, 3700, 4340, 4542, 4818
BmtI GCTAGC 1 cut(s) 4962
BmuI ACTGGG 2 cut(s) 3309, 4941
BoxI GACNNNNGTC 2 cut(s) 851, 4443
BpiI GAAGAC 2 cut(s) 1353, 2976
BplI GAGNNNNNCTC 4 cut(s) 1686, 1718, 5715, 5747
BpmI CTGGAG 3 cut(s) 293, 633, 3798
Bpu10I CCTNAGC 3 cut(s) 114, 4349, 4473
Bpu1102I GCTNAGC 1 cut(s) 3569
Bpu14I TTCGAA 1 cut(s) 5013
BpuEI CTTGAG 2 cut(s) 1664, 4808
BpuMI CCSGG 2 cut(s) 278, 3557
BsaAI YACGTR 4 cut(s) 371, 473, 4159, 4621
BsaBI GATNNNNATC 3 cut(s) 3823, 4050, 5420
BsaHI GRCGYC 3 cut(s) 555, 1650, 4531
BsaI GGTCTC 4 cut(s) 1302, 3427, 4120, 4202
BsaWI WCCGGW 4 cut(s) 524, 1992, 4279, 4548
BsaXI ACNNNNNCTCC 2 cut(s) 792, 822
Bse118I RCCGGY 1 cut(s) 524
Bse1I ACTGG 9 cut(s) 94, 923, 1114, 1162, 1405, 3315, 4936, 5186, 5674
Bse21I CCTNAGG 1 cut(s) 531
Bse3DI GCAATG 2 cut(s) 2868, 3246
Bse8I GATNNNNATC 3 cut(s) 3823, 4050, 5420
BseAI TCCGGA 2 cut(s) 4279, 4548
BseBI CCWGG 5 cut(s) 612, 2028, 3960, 5575, 5758
BseJI GATNNNNATC 3 cut(s) 3823, 4050, 5420
BseMI GCAATG 2 cut(s) 2868, 3246
BseNI ACTGG 9 cut(s) 94, 923, 1114, 1162, 1405, 3315, 4936, 5186, 5674
BseRI GAGGAG 1 cut(s) 3863
BseSI GKGCMC 2 cut(s) 89, 3322
BseXI GCAGC 6 cut(s) 643, 677, 1018, 3169, 3327, 4849
BseYI CCCAGC 1 cut(s) 3702
BsgI GTGCAG 2 cut(s) 2296, 4119
BshTI ACCGGT 1 cut(s) 524
BsiHKAI GWGCWC 1 cut(s) 3322
BsiSI CCGG 6 cut(s) 277, 525, 1993, 3556, 4280, 4549
BslFI GGGAC 2 cut(s) 734, 1255
BsmAI GTCTC 5 cut(s) 1302, 3265, 3427, 4120, 4202
BsmBI CGTCTC 1 cut(s) 3265
BsmFI GGGAC 2 cut(s) 734, 1255
BsmI GAATGC 3 cut(s) 2408, 3623, 5777
Bso31I GGTCTC 4 cut(s) 1302, 3427, 4120, 4202
Bsp119I TTCGAA 1 cut(s) 5013
Bsp1286I GDGCHC 3 cut(s) 89, 2260, 3322
Bsp13I TCCGGA 2 cut(s) 4279, 4548
Bsp1720I GCTNAGC 1 cut(s) 3569
Bsp19I CCATGG 1 cut(s) 81
BspACI CCGC 3 cut(s) 226, 262, 5053
BspEI TCCGGA 2 cut(s) 4279, 4548
BspHI TCATGA 3 cut(s) 1653, 2172, 4408
BspLI GGNNCC 7 cut(s) 1956, 2259, 2540, 3560, 4265, 4799, 5654
BspMAI CTGCAG 2 cut(s) 661, 4695
BspOI GCTAGC 1 cut(s) 4962
BspPI GGATC 4 cut(s) 3769, 3776, 5210, 5416
BspT104I TTCGAA 1 cut(s) 5013
BspTNI GGTCTC 4 cut(s) 1302, 3427, 4120, 4202
BsrDI GCAATG 2 cut(s) 2868, 3246
BsrFI RCCGGY 1 cut(s) 524
BsrI ACTGG 9 cut(s) 94, 923, 1114, 1162, 1405, 3315, 4936, 5186, 5674
BssAI RCCGGY 1 cut(s) 524
BssNAI GTATAC 2 cut(s) 689, 2082
BssNI GRCGYC 3 cut(s) 555, 1650, 4531
BssSI CACGAG 1 cut(s) 4020
BssT1I CCWWGG 7 cut(s) 81, 1374, 2350, 4117, 4525, 4707, 5458
Bst1107I GTATAC 2 cut(s) 689, 2082
Bst2BI CACGAG 1 cut(s) 4020
Bst2UI CCWGG 5 cut(s) 612, 2028, 3960, 5575, 5758
Bst6I CTCTTC 4 cut(s) 1894, 2889, 3852, 5525
BstACI GRCGYC 3 cut(s) 555, 1650, 4531
BstAPI GCANNNNNTGC 2 cut(s) 2246, 5744
BstBAI YACGTR 4 cut(s) 371, 473, 4159, 4621
BstBI TTCGAA 1 cut(s) 5013
BstC8I GCNNGC 9 cut(s) 141, 540, 627, 1149, 1597, 1868, 4842, 4960, 5271
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 1189
BstENI CCTNNNNNAGG 2 cut(s) 4352, 5812
BstH2I RGCGCY 3 cut(s) 539, 1116, 4673
BstHHI GCGC 4 cut(s) 538, 1115, 3483, 4672
BstMAI GTCTC 5 cut(s) 1302, 3265, 3427, 4120, 4202
BstNI CCWGG 5 cut(s) 612, 2028, 3960, 5575, 5758
BstNSI RCATGY 6 cut(s) 1599, 1766, 2755, 3442, 3791, 4420
BstPAI GACNNNNGTC 2 cut(s) 851, 4443
BstPI GGTNACC 1 cut(s) 1189
BstSCI CCNGG 7 cut(s) 276, 610, 2026, 3555, 3958, 5573, 5756
BstSFI CTRYAG 5 cut(s) 657, 1407, 3598, 4691, 4975
BstSLI GKGCMC 2 cut(s) 89, 3322
BstV1I GCAGC 6 cut(s) 643, 677, 1018, 3169, 3327, 4849
BstV2I GAAGAC 2 cut(s) 1353, 2976
BstX2I RGATCY 3 cut(s) 1980, 3532, 3781
BstXI CCANNNNNNTGG 4 cut(s) 82, 3462, 4004, 5619
BstYI RGATCY 3 cut(s) 1980, 3532, 3781
BstZ17I GTATAC 2 cut(s) 689, 2082
Bsu36I CCTNAGG 1 cut(s) 531
BtgI CCRYGG 1 cut(s) 81
BtsI GCAGTG 1 cut(s) 5457
Cac8I GCNNGC 9 cut(s) 141, 540, 627, 1149, 1597, 1868, 4842, 4960, 5271
CciI TCATGA 3 cut(s) 1653, 2172, 4408
CfoI GCGC 4 cut(s) 538, 1115, 3483, 4672
Cfr10I RCCGGY 1 cut(s) 524
Cfr13I GGNCC 8 cut(s) 72, 259, 527, 1323, 3559, 3962, 5055, 5652
CseI GACGC 4 cut(s) 544, 1319, 3120, 3282
CspAI ACCGGT 1 cut(s) 524
CspCI CAANNNNNGTGG 4 cut(s) 253, 288, 664, 699
DraI TTTAAA 2 cut(s) 904, 5509
DraIII CACNNNGTG 2 cut(s) 5002, 5494
DrdI GACNNNNNNGTC 1 cut(s) 5588
DseDI GACNNNNNNGTC 1 cut(s) 5588
EaeI YGGCCR 4 cut(s) 274, 696, 780, 4891
Eam1104I CTCTTC 4 cut(s) 1894, 2889, 3852, 5525
EarI CTCTTC 4 cut(s) 1894, 2889, 3852, 5525
Eco130I CCWWGG 7 cut(s) 81, 1374, 2350, 4117, 4525, 4707, 5458
Eco147I AGGCCT 2 cut(s) 3883, 5807
Eco24I GRGCYC 1 cut(s) 2260
Eco31I GGTCTC 4 cut(s) 1302, 3427, 4120, 4202
Eco32I GATATC 2 cut(s) 4458, 5486
Eco47I GGWCC 5 cut(s) 72, 259, 527, 3962, 5055
Eco47III AGCGCT 1 cut(s) 4671
Eco57I CTGAAG 7 cut(s) 731, 1374, 1559, 2873, 3031, 3660, 4094
Eco81I CCTNAGG 1 cut(s) 531
Eco91I GGTNACC 1 cut(s) 1189
EcoNI CCTNNNNNAGG 2 cut(s) 4352, 5812
EcoO109I RGGNCCY 1 cut(s) 5652
EcoO65I GGTNACC 1 cut(s) 1189
EcoRI GAATTC 1 cut(s) 5681
EcoRII CCWGG 5 cut(s) 610, 2026, 3958, 5573, 5756
EcoRV GATATC 2 cut(s) 4458, 5486
EcoT14I CCWWGG 7 cut(s) 81, 1374, 2350, 4117, 4525, 4707, 5458
EcoT38I GRGCYC 1 cut(s) 2260
ErhI CCWWGG 7 cut(s) 81, 1374, 2350, 4117, 4525, 4707, 5458
Esp3I CGTCTC 1 cut(s) 3265
FaqI GGGAC 2 cut(s) 734, 1255
FauNDI CATATG 5 cut(s) 1080, 1087, 1153, 3736, 5077
FbaI TGATCA 3 cut(s) 1584, 3931, 5085
FblI GTMKAC 3 cut(s) 688, 2081, 5358
Fnu4HI GCNGC 7 cut(s) 226, 657, 666, 1032, 3183, 3341, 4838
FriOI GRGCYC 1 cut(s) 2260
Fsp4HI GCNGC 7 cut(s) 226, 657, 666, 1032, 3183, 3341, 4838
GlaI GCGC 4 cut(s) 537, 1114, 3482, 4671
GluI GCNGC 7 cut(s) 226, 657, 666, 1032, 3183, 3341, 4838
GsaI CCCAGC 1 cut(s) 3706
GsuI CTGGAG 3 cut(s) 293, 633, 3798
HaeII RGCGCY 3 cut(s) 539, 1116, 4673
HapII CCGG 6 cut(s) 277, 525, 1993, 3556, 4280, 4549
HgaI GACGC 4 cut(s) 544, 1319, 3120, 3282
HhaI GCGC 4 cut(s) 538, 1115, 3483, 4672
Hin1I GRCGYC 3 cut(s) 555, 1650, 4531
Hin6I GCGC 4 cut(s) 536, 1113, 3481, 4670
HinP1I GCGC 4 cut(s) 536, 1113, 3481, 4670
HincII GTYRAC 1 cut(s) 5031
HindII GTYRAC 1 cut(s) 5031
HindIII AAGCTT 3 cut(s) 1537, 3771, 3953
HpaII CCGG 6 cut(s) 277, 525, 1993, 3556, 4280, 4549
Hpy99I CGWCG 3 cut(s) 203, 4392, 5286
HpyCH4IV ACGT 8 cut(s) 370, 472, 1650, 3843, 4158, 4440, 4531, 4620
HpySE526I ACGT 8 cut(s) 370, 472, 1650, 3843, 4158, 4440, 4531, 4620
Hsp92I GRCGYC 3 cut(s) 555, 1650, 4531
HspAI GCGC 4 cut(s) 536, 1113, 3481, 4670
Kpn2I TCCGGA 2 cut(s) 4279, 4548
Ksp22I TGATCA 3 cut(s) 1584, 3931, 5085
LmnI GCTCC 7 cut(s) 425, 1554, 2263, 3397, 3478, 5028, 5134
Lsp1109I GCAGC 6 cut(s) 643, 677, 1018, 3169, 3327, 4849
LweI GCATC 9 cut(s) 457, 1403, 2040, 2353, 3658, 3700, 4340, 4542, 4818
MaeII ACGT 8 cut(s) 370, 472, 1650, 3843, 4158, 4440, 4531, 4620
MaeIII GTNAC 5 cut(s) 446, 1189, 3019, 4219, 4436
MfeI CAATTG 3 cut(s) 2241, 3752, 4832
MflI RGATCY 3 cut(s) 1980, 3532, 3781
MhlI GDGCHC 3 cut(s) 89, 2260, 3322
MlsI TGGCCA 1 cut(s) 782
MluNI TGGCCA 1 cut(s) 782
MlyI GAGTC 3 cut(s) 1178, 2337, 5779
MmeI TCCRAC 4 cut(s) 2571, 3100, 3275, 5854
Mox20I TGGCCA 1 cut(s) 782
MroI TCCGGA 2 cut(s) 4279, 4548
MroXI GAANNNNTTC 6 cut(s) 481, 3651, 4107, 4174, 4796, 5009
MscI TGGCCA 1 cut(s) 782
MslI CAYNNNNRTG 8 cut(s) 80, 105, 2352, 2489, 4046, 4281, 4887, 4911
Msp20I TGGCCA 1 cut(s) 782
MspA1I CMGCKG 2 cut(s) 1247, 4840
MspI CCGG 6 cut(s) 277, 525, 1993, 3556, 4280, 4549
MspR9I CCNGG 7 cut(s) 278, 612, 2028, 3557, 3960, 5575, 5758
MunI CAATTG 3 cut(s) 2241, 3752, 4832
Mva1269I GAATGC 3 cut(s) 2408, 3623, 5777
MvaI CCWGG 5 cut(s) 612, 2028, 3960, 5575, 5758
NciI CCSGG 2 cut(s) 278, 3557
NcoI CCATGG 1 cut(s) 81
NdeI CATATG 5 cut(s) 1080, 1087, 1153, 3736, 5077
NheI GCTAGC 1 cut(s) 4958
NlaIV GGNNCC 7 cut(s) 1956, 2259, 2540, 3560, 4265, 4799, 5654
NmuCI GTSAC 3 cut(s) 446, 4219, 4436
NspI RCATGY 6 cut(s) 1599, 1766, 2755, 3442, 3791, 4420
NspV TTCGAA 1 cut(s) 5013
OliI CACNNNNGTG 1 cut(s) 2352
PaeI GCATGC 1 cut(s) 1599
PagI TCATGA 3 cut(s) 1653, 2172, 4408
PceI AGGCCT 2 cut(s) 3883, 5807
PciI ACATGT 2 cut(s) 1762, 2751
PcsI WCGNNNNNNNCGW 3 cut(s) 198, 679, 1656
PctI GAATGC 3 cut(s) 2408, 3623, 5777
PdmI GAANNNNTTC 6 cut(s) 481, 3651, 4107, 4174, 4796, 5009
PfeI GAWTC 9 cut(s) 1044, 1610, 2359, 2719, 2780, 4051, 4614, 5010, 5154
PflMI CCANNNNNTGG 3 cut(s) 1154, 1606, 3974
PfoI TCCNGGA 1 cut(s) 5573
PinAI ACCGGT 1 cut(s) 524
PkrI GCNGC 7 cut(s) 227, 658, 667, 1033, 3184, 3342, 4839
PleI GAGTC 3 cut(s) 1177, 2336, 5779
PpsI GAGTC 3 cut(s) 1177, 2336, 5779
Ppu21I YACGTR 4 cut(s) 371, 473, 4159, 4621
PscI ACATGT 2 cut(s) 1762, 2751
PshAI GACNNNNGTC 2 cut(s) 851, 4443
PshBI ATTAAT 1 cut(s) 3381
PsiI TTATAA 2 cut(s) 1211, 4676
Psp6I CCWGG 5 cut(s) 610, 2026, 3958, 5573, 5756
PspEI GGTNACC 1 cut(s) 1189
PspFI CCCAGC 1 cut(s) 3702
PspGI CCWGG 5 cut(s) 610, 2026, 3958, 5573, 5756
PspN4I GGNNCC 7 cut(s) 1956, 2259, 2540, 3560, 4265, 4799, 5654
PspPI GGNCC 8 cut(s) 72, 259, 527, 1323, 3559, 3962, 5055, 5652
PsrI GAACNNNNNNTAC 2 cut(s) 466, 498
PstI CTGCAG 2 cut(s) 661, 4695
PsuI RGATCY 3 cut(s) 1980, 3532, 3781
PvuII CAGCTG 2 cut(s) 1247, 4840
RseI CAYNNNNRTG 8 cut(s) 80, 105, 2352, 2489, 4046, 4281, 4887, 4911
SatI GCNGC 7 cut(s) 226, 657, 666, 1032, 3183, 3341, 4838
Sau96I GGNCC 8 cut(s) 72, 259, 527, 1323, 3559, 3962, 5055, 5652
ScaI AGTACT 2 cut(s) 752, 5694
SchI GAGTC 3 cut(s) 1178, 2337, 5779
ScrFI CCNGG 7 cut(s) 278, 612, 2028, 3557, 3960, 5575, 5758
SduI GDGCHC 3 cut(s) 89, 2260, 3322
SfaNI GCATC 9 cut(s) 457, 1403, 2040, 2353, 3658, 3700, 4340, 4542, 4818
SfcI CTRYAG 5 cut(s) 657, 1407, 3598, 4691, 4975
SfuI TTCGAA 1 cut(s) 5013
SinI GGWCC 5 cut(s) 72, 259, 527, 3962, 5055
SmiMI CAYNNNNRTG 8 cut(s) 80, 105, 2352, 2489, 4046, 4281, 4887, 4911
SmlI CTYRAG 2 cut(s) 1643, 4787
SmoI CTYRAG 2 cut(s) 1643, 4787
SpeI ACTAGT 1 cut(s) 3038
SphI GCATGC 1 cut(s) 1599
SseBI AGGCCT 2 cut(s) 3883, 5807
SsiI CCGC 3 cut(s) 226, 262, 5053
SspI AATATT 4 cut(s) 595, 679, 2416, 3450
StuI AGGCCT 2 cut(s) 3883, 5807
StyD4I CCNGG 7 cut(s) 276, 610, 2026, 3555, 3958, 5573, 5756
StyI CCWWGG 7 cut(s) 81, 1374, 2350, 4117, 4525, 4707, 5458
TaiI ACGT 8 cut(s) 373, 475, 1653, 3846, 4161, 4443, 4534, 4623
TaqI TCGA 9 cut(s) 192, 269, 286, 1704, 1977, 3084, 4460, 5013, 5329
TauI GCSGC 1 cut(s) 228
TfiI GAWTC 9 cut(s) 1044, 1610, 2359, 2719, 2780, 4051, 4614, 5010, 5154
TseFI GTSAC 3 cut(s) 446, 4219, 4436
TseI GCWGC 6 cut(s) 656, 665, 1031, 3182, 3340, 4837
Tsp45I GTSAC 3 cut(s) 446, 4219, 4436
TspGWI ACGGA 9 cut(s) 844, 907, 1502, 2579, 2630, 4138, 4647, 5314, 5730
Van91I CCANNNNNTGG 3 cut(s) 1154, 1606, 3974
VneI GTGCAC 1 cut(s) 3318
VpaK11BI GGWCC 5 cut(s) 72, 259, 527, 3962, 5055
VspI ATTAAT 1 cut(s) 3381
XagI CCTNNNNNAGG 2 cut(s) 4352, 5812
XbaI TCTAGA 2 cut(s) 1333, 1826
XceI RCATGY 6 cut(s) 1599, 1766, 2755, 3442, 3791, 4420
XcmI CCANNNNNNNNNTGG 1 cut(s) 1735
XmiI GTMKAC 3 cut(s) 688, 2081, 5358
XmnI GAANNNNTTC 6 cut(s) 481, 3651, 4107, 4174, 4796, 5009
ZraI GACGTC 2 cut(s) 1651, 4532
ZrmI AGTACT 2 cut(s) 752, 5694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.