Rmu_sc0001571.1_g000003

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001571.1
Physical Location & Seq
Reverse (-)
6069 .. 22393
16325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001571.1_g000003.1.cds

Sequence Viewer

Length: 5517 bp
atgtctgagattgtggttgcagagcccatctatgatgatcgagcagaggaaaaaagacccattacaaggtatctcaccatgggcagtgggagtgatcataatcatcctcctgagccatttgagagcgagagattgccttccactttggcctcaaaaatccggagctttcttcgggttgcaaacttgatcgaaagcgaggagcctcggattgcttatctgtgccgctttcatgcctttgaaatagcacataacatggaccgtcgttcgaatgggaggggtgttcgacaattcaaaactacccttctgcagcgacttgaacaggatgaagaaactacaattaggaaacggaaggaaaagagtgatatacgcgagttaagacgcatttatcatgcttacaaggagtacatcatcaaacatgaaggagcatttagcatagaaaatagtcacagagagaagttgataaatgcgcgtataattggttctgtattgtttgaagtcttaaagacagtttcaaatacagccggtcctcaggccctggctaatagaggtggtatccagacaaaaccttatgatatatataatattctaccacttgatcaaggaggtattcagcaaccaatcatgcagctacctgagattaaggcggcagtagcagcaatacggtatattcgtggcataccttccaatgaagatcttcagaaacatgggactttcattgatttgtttgattttcttcagtactgctttggatttcaggaagggaatgtagccaatcagagagagcatctgcttctactccttgctaatattcacaaacggaaaactcataaacagacatctgtctcaaaattaggagatgctgcagtggacgagttaatgcggagaatttttaaaaattatacaaactggtgcaagtttttgggaaggaaaagcaacatccggttaccttatgtgaaacaagaagcccaacaatataaacttctatttctggggctttaccttcttatatggggcgaggctgcaaacttgcgattcatgccagagtgtctctgttatatttttcaccatatggcatatgagctacatggcatgttaactggtgctgttagcttgacaacatgggagaaggtcatgccagcatatggagggcagtctgagtctttccttaacaatgttgttgcccccatatatggggttataagagaggaagccgagaaaagcaagtgtgggacagctgaccattccacatggagaaactatgacgatctgaatgagtatttttggtcttctgattgttttgaaatcggttggcccatgcgtctagatcacgatttcttctttacagactctccaacaaaatccaatgctaagaatgcttcagcatccactgctcctgtagaagaaagaaggaaggaagatgaggaggaagatgaagttggggttactaaagaagaagtccgtgaacccaaatggttgggcaaaacaaatttcgtagaagtacgttcgttttggcaaatttttagaagctttgacagaatgtggagcttttttattgtttcacttcaggcattaataattatggcatgccatgaattggaatctccacttcagttgtttgacaaagttatatttgaggatatcatgagcatcttcattacatctgcatttcttaaattcatacaagcaatactcgacattgcctttacatggaaagtgagacaaacactggacttctctgcaaaagtaaaacatgttatgaagctcggtgttgcaatgatatggactatagttcttcctataaaaccccttatagagccaacaaagcagatcatgaaaattggtgtgccaatgtatgattggcatgagctttttccgaaagttaagagtaatgctggtgcgattgctgctatatgggctccaattatagttgtgtactttatggacactcagatatggtattctgttttttgcacaatctttggtggagtctatggcattttgcatcaccttggtgagattcgaactttgggaatgttgaggagtagatttcactccttgccttccgcattcaatatttctcttattccaccctcattgaggaatgaccaaaagagaagaagaggtttcttttacaataaattcagaaaggtatcaaagagtgaaaaaaatggtcttgccaagtttgtcttggtttggaaccaaattatcaatagttttcgattggaggacttgataaacaacagggagctggatttaatgacaatgccaatgtcttcagaattattttccggcatagttcgttggccagtttttcttcttgcaaataagttttcaactgccctgagtattgcaaaggattttgtggggagggatgaaagtcttgtcagaagacttaaaaaagatgagtacatgtactgtgctgtgaaggagtgctacgaatcattgaagtacatccttgaaatcctcattattggggatctcgaaaagaggattgtatctgccgtactgactgaaattgaagaaagcatcacaagatcaagtcttcttgagaactttaggatgattaaagttccagatcttttggctaaatgtatcgagctaattgaacttttggttgagggaaatgaagaccatcgtggcaaagttgtgaaagttctccaagatatatttgagcttgtaatcgatgatatgatgacgactggcttcaggatattagagttgctggattcatcccaacagactgaaacagatgctgcttatttttctggaagcattgaatccccattattcggatctgctggtggcaagaattctatccatttccctttgccagacagtgctgctctgaatgagcagatcaagcgttttcttctgttgcttactgtccaagatacagcaatggacattccaactaacttagaggctcggagacgcatatcattctttgccacttctctctttatgaatatgccacatgcacccacagtgtccaatatggtgccattcagtgttatgacaccacattacctggaggatattaatttttcaatggaggagctgcattcaagccagcaagaagtttctatcatcttttacatgcaaaagatatttccagatgagtggaaaaacttcctggagcgcatgggttatgaaaatttggatgggttggagaaggacaaaaaggaagagcttagaaattgggcttctttccggggccaaacactgagcagaacagttagaggaatgatgtactatagagaagccttaaaactacaagcatttcttgacatggctgaagatgaagatattcttgaaggttatgatgctgttgaaagtagaaatcatgcattatctgctcagctagatgcattagcagacatgaaattcacatatgttgttacttgccaattatttggatcacaaaaagctgctggagacccacatgcacaggacctaattgacttgatgaaaagatacccaactctccgtgttgcttatgtcgaggagaaagaagagatagtggagaacaagccttgcaaagtttattcttcagtattggttaaagctatccccaagtatggtgatcaggaaatatatcgcataaagcttcctggtgcaccaactattggagaagggaagcccgaaaaccagaaccatggaataatcttcactcgtggtgaagctctccaaaccattgatatgaaccaagacagttatttggaggaagccttcaaaatgagaaatcttctgcaagaatttcttcagaaccgaggacggcgacctcctatactgcttggtttgagggaacacatatttacaggaagtgtttcttctcttgcatggttcatgtcttatcaagagaccagctttgtcaccattggtcaaaggcttcttgccaatcctctcagggtacgattccactatggacatccagatgtatttgacaggttattccacatcacaagaggtggattaagcaaagcatcaaaaacaattaacctgagcgaggatgtttttgctgggtataattctaccttacgacggggatggatcacgtatcatgaatacatgcaagttggcaagggtcgtgatgtaggtctaaaccagatctcaaagtttgaagctaaggttgctaacggtaacagtgaacaaactctaagccgtgacatataccgccttggacgtcagtttgatttcttcaggatgctgtcttgttatttcacaaccattgggttttactttagcagcctgatatcagttattggaatctatgtgttcctttacggacagctatacctagttctcagtggcttggaaaaagccctcataattgaggctagactgcagaacatacaatccttggaaacagctcttgcctcccagtcatttatacagcttgggctattaacaggaatgccaatggtgatggaaattggacttgagaaagggttcctcaatgcactaaaagattttgtcctgatgcaattgcagctggcttctgtttttttcacgttctcatttggaacaaaaatccattattacggccgaacaattctgcatggtggtgctaaatacagacccactgggcgtaaggttgtggtgtttcatactagcttcactgaaaactacaggttgtattcaagaagccactttgtcaaaggatttgagttactgctcctgttgattgtttataacttgtttagacggtcctatgagagcgacatggcgtatgtattagtcacttattcgatttggttcatgtcaatcacttggttgttcgctccatttctttttaatccgtctggattcagttgggacaagatagtagatgactggaaagattggaataagtggatcaggcagcagggtggtattggagttcaccaagataaaagttggcagtcttggtggatagatgagcaggaccatcttcgtcattctgggatgagttctaggttgtttgaaatactcctttctgttcggtttttcctgtatcagtatggtctggtctaccaccttgacatttcccagaatagcaggaattttctggtttatttgctttcatggatagtgatcctcgttgttttcttgttagtaaaggcagtgaacctcggaaggcaaaagttcagtgctagatatcaccttgtgtttaggctattcaaagcaatccttttcttgggtgttctttccatcataataactctttctcatgtgtgtcatctatcttggatggacttggttgtgtgctgcctagcatttttgccaacagggtggggtttgatattgtttgcacaagctgtgaggcccctgatagagaatactggattgtgggaattcaccagagtacttgctaaaacatatgactacggaatgggggttgttctctttacacctattgctgtcttggcatggcttccgattatatcagcattccagactcgattcctgttcaatgaggccttcaataggcacttgcagatccaaccaattcttcaggggaagaagaagaacagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1838

Amino Acids

212.61

Weight (kDa)

8.42

Isoelectric Point (pI)

46.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016003)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14570 AT3G14570 AT3G14570
fragaria_vesca FvH4_3g16960
malus_domestica MD11G1276200.v1.1
prunus_persica Prupe.4G152000_v2.0.a1
pyrus_communis pycom11g24450
rosa_chinensis RchiOBHm_Chr5g0028271
rosa_laevigata RLG00000033078
rosa_multiflora Rmu_sc0001571.1_g000003
rosa_roxburghii Rroxscaffold_1G00051450
rosa_rugosa Rorug05G0105400
rosa_samantha Rh5AG198900 Rh5DG199100
rosa_wichuraiana Rw5G018140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1199, 4692
AatII GACGTC 1 cut(s) 4186
AccB1I GGYRCC 1 cut(s) 2998
AccB7I CCANNNNNTGG 3 cut(s) 1142, 1594, 3626
AccI GTMKAC 1 cut(s) 5010
AccII CGCG 2 cut(s) 369, 469
AccIII TCCGGA 1 cut(s) 159
AciI CCGC 5 cut(s) 223, 644, 880, 2064, 4174
AclWI GGATC 7 cut(s) 2484, 2800, 3424, 4058, 4862, 5068, 5473
AcoI YGGCCR 2 cut(s) 2303, 4543
AcyI GRCGYC 1 cut(s) 4183
AdeI CACNNNGTG 1 cut(s) 5146
AflIII ACRYGT 2 cut(s) 1750, 2409
AjnI CCWGG 4 cut(s) 534, 3027, 3132, 3610
AjuI GAANNNNNNNTTGG 4 cut(s) 1419, 1451, 5475, 5507
AleI CACNNNNGTG 1 cut(s) 2010
AloI GAACNNNNNNTCC 2 cut(s) 4340, 4372
Alw21I GWGCWC 1 cut(s) 3619
Alw26I GTCTC 6 cut(s) 847, 1052, 1711, 2923, 3429, 3854
Alw44I GTGCAC 1 cut(s) 3615
AlwI GGATC 7 cut(s) 2484, 2800, 3424, 4058, 4862, 5068, 5473
AlwNI CAGNNNCTG 2 cut(s) 535, 2753
Aor13HI TCCGGA 1 cut(s) 159
AoxI GGCC 8 cut(s) 147, 531, 1310, 2303, 3214, 4543, 5303, 5457
ApaLI GTGCAC 1 cut(s) 3615
AseI ATTAAT 2 cut(s) 1571, 3039
Asp700I GAANNNNTTC 6 cut(s) 693, 3128, 3306, 3759, 3826, 4448
AspLEI GCGC 2 cut(s) 469, 3141
AspS9I GGNCC 9 cut(s) 256, 524, 532, 1311, 3214, 3451, 4707, 4924, 5304
AsuC2I CCSGG 1 cut(s) 3212
AsuII TTCGAA 2 cut(s) 266, 2020
AvaII GGWCC 5 cut(s) 256, 524, 3451, 4707, 4924
AxyI CCTNAGG 1 cut(s) 528
BaeGI GKGCMC 1 cut(s) 3619
BalI TGGCCA 1 cut(s) 2305
BanI GGYRCC 1 cut(s) 2998
BanII GRGCYC 2 cut(s) 27, 1918
BarI GAAGNNNNNNTAC 2 cut(s) 2417, 2449
BauI CACGAG 1 cut(s) 3672
BbsI GAAGAC 5 cut(s) 1278, 2265, 2395, 2534, 2634
Bbv12I GWGCWC 1 cut(s) 3619
BccI CCATC 8 cut(s) 35, 2640, 3155, 4041, 4420, 4935, 5198, 5224
BceAI ACGGC 4 cut(s) 2486, 3791, 4146, 4558
BciT130I CCWGG 4 cut(s) 536, 3029, 3134, 3612
BciVI GTATCC 1 cut(s) 563
BclI TGATCA 3 cut(s) 94, 595, 3583
BcnI CCSGG 1 cut(s) 3212
BcoDI GTCTC 6 cut(s) 847, 1052, 1711, 2923, 3429, 3854
BfaI CTAG 8 cut(s) 1322, 3362, 4298, 4338, 4611, 4953, 5133, 5252
BfmI CTRYAG 7 cut(s) 305, 861, 1395, 1785, 3253, 4343, 4627
BfuI GTATCC 1 cut(s) 563
BglII AGATCT 3 cut(s) 691, 2575, 4107
BlpI GCTNAGC 1 cut(s) 3357
BmcAI AGTACT 2 cut(s) 740, 5346
Bme1390I CCNGG 5 cut(s) 536, 3029, 3134, 3212, 3612
Bme18I GGWCC 5 cut(s) 256, 524, 3451, 4707, 4924
BmgT120I GGNCC 9 cut(s) 256, 524, 532, 1311, 3214, 3451, 4707, 4924, 5304
BmiI GGNNCC 7 cut(s) 201, 1917, 2198, 3000, 3215, 4451, 5306
BmrFI CCNGG 5 cut(s) 536, 3029, 3134, 3212, 3612
BmrI ACTGGG 2 cut(s) 4375, 4593
BmuI ACTGGG 2 cut(s) 4375, 4593
BoxI GACNNNNGTC 1 cut(s) 839
BpiI GAAGAC 5 cut(s) 1278, 2265, 2395, 2534, 2634
BpmI CTGGAG 3 cut(s) 3050, 3155, 3453
Bpu10I CCTNAGC 3 cut(s) 111, 4001, 4125
Bpu1102I GCTNAGC 1 cut(s) 3357
Bpu14I TTCGAA 2 cut(s) 266, 2020
BpuEI CTTGAG 2 cut(s) 2567, 4460
BpuMI CCSGG 1 cut(s) 3212
Bsa29I ATCGAT 1 cut(s) 2682
BsaAI YACGTR 1 cut(s) 4056
BsaBI GATNNNNATC 2 cut(s) 99, 5072
BsaHI GRCGYC 1 cut(s) 4183
BsaI GGTCTC 2 cut(s) 3429, 3854
BsaWI WCCGGW 2 cut(s) 159, 939
BsaXI ACNNNNNCTCC 2 cut(s) 1333, 1363
Bse118I RCCGGY 1 cut(s) 521
Bse1I ACTGG 9 cut(s) 911, 1102, 1731, 2306, 2704, 4381, 4588, 4838, 5326
Bse21I CCTNAGG 1 cut(s) 528
Bse3DI GCAATG 3 cut(s) 1695, 1779, 2904
Bse8I GATNNNNATC 2 cut(s) 99, 5072
BseAI TCCGGA 1 cut(s) 159
BseBI CCWGG 4 cut(s) 536, 3029, 3134, 3612
BseCI ATCGAT 1 cut(s) 2682
BseJI GATNNNNATC 2 cut(s) 99, 5072
BseMI GCAATG 3 cut(s) 1695, 1779, 2904
BseNI ACTGG 9 cut(s) 911, 1102, 1731, 2306, 2704, 4381, 4588, 4838, 5326
BseRI GAGGAG 5 cut(s) 212, 1436, 2053, 3068, 3518
BseSI GKGCMC 1 cut(s) 3619
BseX3I CGGCCG 1 cut(s) 4543
BseYI CCCAGC 1 cut(s) 4019
Bsh1236I CGCG 2 cut(s) 369, 469
Bsh1285I CGRYCG 1 cut(s) 4546
BshFI GGCC 8 cut(s) 149, 533, 1312, 2305, 3216, 4545, 5305, 5459
BshNI GGYRCC 1 cut(s) 2998
BshVI ATCGAT 1 cut(s) 2682
BsiEI CGRYCG 1 cut(s) 4546
BsiHKAI GWGCWC 1 cut(s) 3619
BsiSI CCGG 5 cut(s) 160, 522, 940, 2289, 3211
BslFI GGGAC 3 cut(s) 721, 1243, 4829
BsmAI GTCTC 6 cut(s) 847, 1052, 1711, 2923, 3429, 3854
BsmBI CGTCTC 1 cut(s) 2923
BsmFI GGGAC 3 cut(s) 721, 1243, 4829
BsmI GAATGC 5 cut(s) 1378, 2066, 3061, 4419, 5429
BsnI GGCC 8 cut(s) 149, 533, 1312, 2305, 3216, 4545, 5305, 5459
Bso31I GGTCTC 2 cut(s) 3429, 3854
Bsp119I TTCGAA 2 cut(s) 266, 2020
Bsp1286I GDGCHC 3 cut(s) 27, 1918, 3619
Bsp13I TCCGGA 1 cut(s) 159
Bsp1720I GCTNAGC 1 cut(s) 3357
Bsp19I CCATGG 2 cut(s) 78, 3655
BspACI CCGC 5 cut(s) 223, 644, 880, 2064, 4174
BspANI GGCC 8 cut(s) 149, 533, 1312, 2305, 3216, 4545, 5305, 5459
BspDI ATCGAT 1 cut(s) 2682
BspEI TCCGGA 1 cut(s) 159
BspFNI CGCG 2 cut(s) 369, 469
BspHI TCATGA 3 cut(s) 1641, 1830, 4060
BspLI GGNNCC 7 cut(s) 201, 1917, 2198, 3000, 3215, 4451, 5306
BspMAI CTGCAG 3 cut(s) 309, 865, 4347
BspPI GGATC 7 cut(s) 2484, 2800, 3424, 4058, 4862, 5068, 5473
BspQI GCTCTTC 1 cut(s) 3180
BspT104I TTCGAA 2 cut(s) 266, 2020
BspT107I GGYRCC 1 cut(s) 2998
BspTNI GGTCTC 2 cut(s) 3429, 3854
BsrDI GCAATG 3 cut(s) 1695, 1779, 2904
BsrFI RCCGGY 1 cut(s) 521
BsrI ACTGG 9 cut(s) 911, 1102, 1731, 2306, 2704, 4381, 4588, 4838, 5326
BssAI RCCGGY 1 cut(s) 521
BssNI GRCGYC 1 cut(s) 4183
BssSI CACGAG 1 cut(s) 3672
BssT1I CCWWGG 5 cut(s) 78, 2008, 3655, 4177, 4359
Bst2BI CACGAG 1 cut(s) 3672
Bst2UI CCWGG 4 cut(s) 536, 3029, 3134, 3612
Bst6I CTCTTC 3 cut(s) 2113, 3180, 3507
BstACI GRCGYC 1 cut(s) 4183
BstAPI GCANNNNNTGC 2 cut(s) 1388, 3353
BstBAI YACGTR 1 cut(s) 4056
BstBI TTCGAA 2 cut(s) 266, 2020
BstC8I GCNNGC 4 cut(s) 1137, 1585, 3071, 4494
BstDSI CCRYGG 2 cut(s) 78, 3655
BstEII GGTNACC 1 cut(s) 942
BstENI CCTNNNNNAGG 3 cut(s) 2095, 4004, 5464
BstFNI CGCG 2 cut(s) 369, 469
BstHHI GCGC 2 cut(s) 469, 3141
BstMAI GTCTC 6 cut(s) 847, 1052, 1711, 2923, 3429, 3854
BstMCI CGRYCG 1 cut(s) 4546
BstNI CCWGG 4 cut(s) 536, 3029, 3134, 3612
BstNSI RCATGY 8 cut(s) 1093, 1587, 1754, 2413, 2978, 3100, 3446, 4072
BstPAI GACNNNNGTC 1 cut(s) 839
BstPI GGTNACC 1 cut(s) 942
BstSCI CCNGG 5 cut(s) 534, 3027, 3132, 3210, 3610
BstSFI CTRYAG 7 cut(s) 305, 861, 1395, 1785, 3253, 4343, 4627
BstSLI GKGCMC 1 cut(s) 3619
BstUI CGCG 2 cut(s) 369, 469
BstV2I GAAGAC 5 cut(s) 1278, 2265, 2395, 2534, 2634
BstX2I RGATCY 6 cut(s) 691, 2476, 2575, 2792, 4107, 5478
BstXI CCANNNNNNTGG 5 cut(s) 1474, 3120, 3413, 3656, 5271
BstYI RGATCY 6 cut(s) 691, 2476, 2575, 2792, 4107, 5478
BstZI CGGCCG 1 cut(s) 4543
Bsu15I ATCGAT 1 cut(s) 2682
Bsu36I CCTNAGG 1 cut(s) 528
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 8 cut(s) 149, 533, 1312, 2305, 3216, 4545, 5305, 5459
BsuTUI ATCGAT 1 cut(s) 2682
BtgI CCRYGG 2 cut(s) 78, 3655
BtsI GCAGTG 4 cut(s) 91, 870, 1386, 5109
Cac8I GCNNGC 4 cut(s) 1137, 1585, 3071, 4494
CaiI CAGNNNCTG 2 cut(s) 535, 2753
CciI TCATGA 3 cut(s) 1641, 1830, 4060
CfoI GCGC 2 cut(s) 469, 3141
Cfr10I RCCGGY 1 cut(s) 521
Cfr13I GGNCC 9 cut(s) 256, 524, 532, 1311, 3214, 3451, 4707, 4924, 5304
ClaI ATCGAT 1 cut(s) 2682
CseI GACGC 3 cut(s) 387, 1307, 2940
CspCI CAANNNNNGTGG 4 cut(s) 1593, 1628, 2076, 2111
DraI TTTAAA 1 cut(s) 892
DraIII CACNNNGTG 1 cut(s) 5146
EaeI YGGCCR 2 cut(s) 2303, 4543
EagI CGGCCG 1 cut(s) 4543
Eam1104I CTCTTC 3 cut(s) 2113, 3180, 3507
EarI CTCTTC 3 cut(s) 2113, 3180, 3507
EclXI CGGCCG 1 cut(s) 4543
Eco130I CCWWGG 5 cut(s) 78, 2008, 3655, 4177, 4359
Eco147I AGGCCT 1 cut(s) 5459
Eco24I GRGCYC 2 cut(s) 27, 1918
Eco31I GGTCTC 2 cut(s) 3429, 3854
Eco32I GATATC 3 cut(s) 1639, 4254, 5138
Eco47I GGWCC 5 cut(s) 256, 524, 3451, 4707, 4924
Eco52I CGGCCG 1 cut(s) 4543
Eco81I CCTNAGG 1 cut(s) 528
Eco91I GGTNACC 1 cut(s) 942
EcoNI CCTNNNNNAGG 3 cut(s) 2095, 4004, 5464
EcoO109I RGGNCCY 3 cut(s) 532, 3451, 5304
EcoO65I GGTNACC 1 cut(s) 942
EcoRI GAATTC 2 cut(s) 2809, 5333
EcoRII CCWGG 4 cut(s) 534, 3027, 3132, 3610
EcoRV GATATC 3 cut(s) 1639, 4254, 5138
EcoT14I CCWWGG 5 cut(s) 78, 2008, 3655, 4177, 4359
EcoT22I ATGCAT 2 cut(s) 3349, 3370
EcoT38I GRGCYC 2 cut(s) 27, 1918
ErhI CCWWGG 5 cut(s) 78, 2008, 3655, 4177, 4359
Esp3I CGTCTC 1 cut(s) 2923
FaqI GGGAC 3 cut(s) 721, 1243, 4829
FauNDI CATATG 5 cut(s) 1068, 1075, 1141, 3391, 5359
FbaI TGATCA 3 cut(s) 94, 595, 3583
FblI GTMKAC 1 cut(s) 5010
FriOI GRGCYC 2 cut(s) 27, 1918
FspBI CTAG 8 cut(s) 1322, 3362, 4298, 4338, 4611, 4953, 5133, 5252
GlaI GCGC 2 cut(s) 468, 3140
GsaI CCCAGC 1 cut(s) 4023
GsuI CTGGAG 3 cut(s) 3050, 3155, 3453
HaeIII GGCC 8 cut(s) 149, 533, 1312, 2305, 3216, 4545, 5305, 5459
HapII CCGG 5 cut(s) 160, 522, 940, 2289, 3211
HgaI GACGC 3 cut(s) 387, 1307, 2940
HhaI GCGC 2 cut(s) 469, 3141
Hin1I GRCGYC 1 cut(s) 4183
Hin6I GCGC 2 cut(s) 467, 3139
HinP1I GCGC 2 cut(s) 467, 3139
HincII GTYRAC 1 cut(s) 1095
HindII GTYRAC 1 cut(s) 1095
HindIII AAGCTT 2 cut(s) 1525, 3605
HpaI GTTAAC 1 cut(s) 1095
HpaII CCGG 5 cut(s) 160, 522, 940, 2289, 3211
Hpy166II GTNNAC 9 cut(s) 868, 1095, 1463, 1933, 3617, 4148, 4882, 5011, 5107
Hpy8I GTNNAC 9 cut(s) 868, 1095, 1463, 1933, 3617, 4148, 4882, 5011, 5107
Hpy99I CGWCG 2 cut(s) 264, 4044
HpyCH4IV ACGT 4 cut(s) 1501, 4055, 4183, 4511
HpySE526I ACGT 4 cut(s) 1501, 4055, 4183, 4511
Hsp92I GRCGYC 1 cut(s) 4183
HspAI GCGC 2 cut(s) 467, 3139
Kpn2I TCCGGA 1 cut(s) 159
Ksp22I TGATCA 3 cut(s) 94, 595, 3583
KspAI GTTAAC 1 cut(s) 1095
LguI GCTCTTC 1 cut(s) 3180
MaeI CTAG 8 cut(s) 1322, 3362, 4298, 4338, 4611, 4953, 5133, 5252
MaeII ACGT 4 cut(s) 1501, 4055, 4183, 4511
MaeIII GTNAC 9 cut(s) 443, 942, 1441, 3397, 3871, 4139, 4163, 4668, 4738
MfeI CAATTG 1 cut(s) 4484
MflI RGATCY 6 cut(s) 691, 2476, 2575, 2792, 4107, 5478
MhlI GDGCHC 3 cut(s) 27, 1918, 3619
MlsI TGGCCA 1 cut(s) 2305
MluNI TGGCCA 1 cut(s) 2305
MlyI GAGTC 4 cut(s) 1166, 1340, 1995, 5431
MmeI TCCRAC 4 cut(s) 1376, 2933, 3147, 5506
Mox20I TGGCCA 1 cut(s) 2305
Mph1103I ATGCAT 2 cut(s) 3349, 3370
MroI TCCGGA 1 cut(s) 159
MroXI GAANNNNTTC 6 cut(s) 693, 3128, 3306, 3759, 3826, 4448
MscI TGGCCA 1 cut(s) 2305
MslI CAYNNNNRTG 4 cut(s) 2010, 3698, 3933, 4563
Msp20I TGGCCA 1 cut(s) 2305
MspA1I CMGCKG 2 cut(s) 1235, 4492
MspI CCGG 5 cut(s) 160, 522, 940, 2289, 3211
MspR9I CCNGG 5 cut(s) 536, 3029, 3134, 3212, 3612
MunI CAATTG 1 cut(s) 4484
Mva1269I GAATGC 5 cut(s) 1378, 2066, 3061, 4419, 5429
MvaI CCWGG 4 cut(s) 536, 3029, 3134, 3612
MvnI CGCG 2 cut(s) 369, 469
NciI CCSGG 1 cut(s) 3212
NcoI CCATGG 2 cut(s) 78, 3655
NdeI CATATG 5 cut(s) 1068, 1075, 1141, 3391, 5359
NlaIV GGNNCC 7 cut(s) 201, 1917, 2198, 3000, 3215, 4451, 5306
NmeAIII GCCGAG 1 cut(s) 1237
NmuCI GTSAC 4 cut(s) 443, 3871, 4163, 4738
NsiI ATGCAT 2 cut(s) 3349, 3370
NspI RCATGY 8 cut(s) 1093, 1587, 1754, 2413, 2978, 3100, 3446, 4072
NspV TTCGAA 2 cut(s) 266, 2020
OliI CACNNNNGTG 1 cut(s) 2010
PaeI GCATGC 1 cut(s) 1587
PagI TCATGA 3 cut(s) 1641, 1830, 4060
PceI AGGCCT 1 cut(s) 5459
PciI ACATGT 2 cut(s) 1750, 2409
PciSI GCTCTTC 1 cut(s) 3180
PcsI WCGNNNNNNNCGW 1 cut(s) 667
PctI GAATGC 5 cut(s) 1378, 2066, 3061, 4419, 5429
PdmI GAANNNNTTC 6 cut(s) 693, 3128, 3306, 3759, 3826, 4448
PflMI CCANNNNNTGG 3 cut(s) 1142, 1594, 3626
PfoI TCCNGGA 1 cut(s) 3132
PleI GAGTC 4 cut(s) 1165, 1340, 1994, 5431
PpsI GAGTC 4 cut(s) 1165, 1340, 1994, 5431
Ppu21I YACGTR 1 cut(s) 4056
PpuMI RGGWCCY 1 cut(s) 3451
PscI ACATGT 2 cut(s) 1750, 2409
PshAI GACNNNNGTC 1 cut(s) 839
PshBI ATTAAT 2 cut(s) 1571, 3039
PsiI TTATAA 2 cut(s) 1199, 4692
Psp5II RGGWCCY 1 cut(s) 3451
Psp6I CCWGG 4 cut(s) 534, 3027, 3132, 3610
PspEI GGTNACC 1 cut(s) 942
PspFI CCCAGC 1 cut(s) 4019
PspGI CCWGG 4 cut(s) 534, 3027, 3132, 3610
PspN4I GGNNCC 7 cut(s) 201, 1917, 2198, 3000, 3215, 4451, 5306
PspPI GGNCC 9 cut(s) 256, 524, 532, 1311, 3214, 3451, 4707, 4924, 5304
PspPPI RGGWCCY 1 cut(s) 3451
PsrI GAACNNNNNNTAC 2 cut(s) 463, 495
PstI CTGCAG 3 cut(s) 309, 865, 4347
PstNI CAGNNNCTG 2 cut(s) 535, 2753
PsuI RGATCY 6 cut(s) 691, 2476, 2575, 2792, 4107, 5478
PvuII CAGCTG 2 cut(s) 1235, 4492
RseI CAYNNNNRTG 4 cut(s) 2010, 3698, 3933, 4563
SapI GCTCTTC 1 cut(s) 3180
Sau96I GGNCC 9 cut(s) 256, 524, 532, 1311, 3214, 3451, 4707, 4924, 5304
ScaI AGTACT 2 cut(s) 740, 5346
SchI GAGTC 4 cut(s) 1166, 1340, 1995, 5431
ScrFI CCNGG 5 cut(s) 536, 3029, 3134, 3212, 3612
SduI GDGCHC 3 cut(s) 27, 1918, 3619
SfcI CTRYAG 7 cut(s) 305, 861, 1395, 1785, 3253, 4343, 4627
SfuI TTCGAA 2 cut(s) 266, 2020
SinI GGWCC 5 cut(s) 256, 524, 3451, 4707, 4924
SmiMI CAYNNNNRTG 4 cut(s) 2010, 3698, 3933, 4563
SmlI CTYRAG 2 cut(s) 2546, 4439
SmoI CTYRAG 2 cut(s) 2546, 4439
SphI GCATGC 1 cut(s) 1587
SseBI AGGCCT 1 cut(s) 5459
SsiI CCGC 5 cut(s) 223, 644, 880, 2064, 4174
SspI AATATT 3 cut(s) 583, 808, 2074
SspMI CTAG 8 cut(s) 1322, 3362, 4298, 4338, 4611, 4953, 5133, 5252
StuI AGGCCT 1 cut(s) 5459
StyD4I CCNGG 5 cut(s) 534, 3027, 3132, 3210, 3610
StyI CCWWGG 5 cut(s) 78, 2008, 3655, 4177, 4359
TaiI ACGT 4 cut(s) 1504, 4058, 4186, 4514
TatI WGTACW 8 cut(s) 402, 738, 1932, 2406, 2412, 2448, 3249, 5344
TauI GCSGC 2 cut(s) 225, 647
TseFI GTSAC 4 cut(s) 443, 3871, 4163, 4738
Tsp45I GTSAC 4 cut(s) 443, 3871, 4163, 4738
TspGWI ACGGA 7 cut(s) 361, 832, 1448, 3476, 4299, 4788, 5382
Van91I CCANNNNNTGG 3 cut(s) 1142, 1594, 3626
VneI GTGCAC 1 cut(s) 3615
VpaK11BI GGWCC 5 cut(s) 256, 524, 3451, 4707, 4924
VspI ATTAAT 2 cut(s) 1571, 3039
XagI CCTNNNNNAGG 3 cut(s) 2095, 4004, 5464
XbaI TCTAGA 1 cut(s) 1321
XceI RCATGY 8 cut(s) 1093, 1587, 1754, 2413, 2978, 3100, 3446, 4072
XcmI CCANNNNNNNNNTGG 2 cut(s) 1854, 2185
XmiI GTMKAC 1 cut(s) 5010
XmnI GAANNNNTTC 6 cut(s) 693, 3128, 3306, 3759, 3826, 4448
XspI CTAG 8 cut(s) 1322, 3362, 4298, 4338, 4611, 4953, 5133, 5252
ZraI GACGTC 1 cut(s) 4184
ZrmI AGTACT 2 cut(s) 740, 5346
Zsp2I ATGCAT 2 cut(s) 3349, 3370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.